BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006168
(658 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 211 bits (538), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 174/289 (60%), Gaps = 6/289 (2%)
Query: 309 YRLKDLVSATRKFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVR 368
+ L++L A+ FS +N LG GGFG +YKG L +G +VAVK+L + F+ EV
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 369 LISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLF--GEKRGSLNWKQRFDIILG 426
+IS HRNL+RL G C E +LVY YMAN S+ L E + L+W +R I LG
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 427 TARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTL 486
+ARGLAYLH+ +IIHRD+K +N+LLD++ + + DFGLA+L+ H+ GT+
Sbjct: 148 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTI 207
Query: 487 GYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKS---SETKGEEGEYLLKRAWRLYENG 543
G+ APEY G+ SEK D + +GV++LE+I+G ++ + ++ LL L +
Sbjct: 208 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 267
Query: 544 THWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLK 592
L+D L N E E+++++AL+CTQS+ RP MSEVV +L+
Sbjct: 268 KLEALVDVDLQGN-YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 173/290 (59%), Gaps = 6/290 (2%)
Query: 308 NYRLKDLVSATRKFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEV 367
+ L++L A+ F +N LG GGFG +YKG L +G +VAVK+L ++ F+ EV
Sbjct: 19 RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEV 78
Query: 368 RLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLF--GEKRGSLNWKQRFDIIL 425
+IS HRNL+RL G C E +LVY YMAN S+ L E + L+W +R I L
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 138
Query: 426 GTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGT 485
G+ARGLAYLH+ +IIHRD+K +N+LLD++ + + DFGLA+L+ H+ G
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGX 198
Query: 486 LGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKS---SETKGEEGEYLLKRAWRLYEN 542
+G+ APEY G+ SEK D + +GV++LE+I+G ++ + ++ LL L +
Sbjct: 199 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 258
Query: 543 GTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLK 592
L+D L N E E+++++AL+CTQS+ RP MSEVV +L+
Sbjct: 259 KKLEALVDVDLQGN-YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 108/291 (37%), Positives = 165/291 (56%), Gaps = 19/291 (6%)
Query: 308 NYR--LKDLVSATRKFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFEN 365
+YR L DL AT F + +G G FG +YKG L++G VA+K+ S+
Sbjct: 26 SYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETE 85
Query: 366 EVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEK--RGSLNWKQRFDI 423
L S H +L+ L+G C + E+IL+Y+YM N +L + L+G S++W+QR +I
Sbjct: 86 IETL-SFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 424 ILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSHLSTKF 482
+G ARGL YLH IIHRD+K N+LLD++ PKI DFG+++ E +Q+HL
Sbjct: 145 CIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVV 201
Query: 483 AGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRL--Y 540
GTLGY PEY I G+L+EK D YSFGV++ E++ +S+ + E + W + +
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCA-RSAIVQSLPREMVNLAEWAVESH 260
Query: 541 ENGTHWELMDESLDPNECTK---EAAEKVVEIALMCTQSAANSRPTMSEVV 588
NG +++ +DPN K E+ K + A+ C ++ RP+M +V+
Sbjct: 261 NNGQ----LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/291 (37%), Positives = 164/291 (56%), Gaps = 19/291 (6%)
Query: 308 NYR--LKDLVSATRKFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFEN 365
+YR L DL AT F + +G G FG +YKG L++G VA+K+ S+
Sbjct: 26 SYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETE 85
Query: 366 EVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEK--RGSLNWKQRFDI 423
L S H +L+ L+G C + E+IL+Y+YM N +L + L+G S++W+QR +I
Sbjct: 86 IETL-SFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144
Query: 424 ILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSHLSTKF 482
+G ARGL YLH IIHRD+K N+LLD++ PKI DFG+++ E Q+HL
Sbjct: 145 CIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVV 201
Query: 483 AGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRL--Y 540
GTLGY PEY I G+L+EK D YSFGV++ E++ +S+ + E + W + +
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCA-RSAIVQSLPREMVNLAEWAVESH 260
Query: 541 ENGTHWELMDESLDPNECTK---EAAEKVVEIALMCTQSAANSRPTMSEVV 588
NG +++ +DPN K E+ K + A+ C ++ RP+M +V+
Sbjct: 261 NNGQ----LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 166/300 (55%), Gaps = 21/300 (7%)
Query: 309 YRLKDLVSATRKFSEE------NKLGEGGFGDIYKGTLKNGKIVAVKKLA--IGISRRTL 360
Y LK++ T F E NK+GEGGFG +YKG + N VAVKKLA + I+ L
Sbjct: 18 YELKNV---TNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 361 -SDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSS-LDKFLFGEKRGSLNWK 418
F+ E+++++ H NL+ LLG S G +L LVY YM N S LD+ + L+W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 419 QRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSH 477
R I G A G+ +LHE+ H IHRDIK +N+LLD+ KI+DFGLAR + Q+
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 478 LSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAW 537
+ ++ GT Y APE A+ G+++ K D YSFGV++LEII+G + + E L +
Sbjct: 191 MXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 249
Query: 538 RLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
E T + +D+ + N+ + E + +A C N RP + +V LL+ ++S
Sbjct: 250 IEDEEKTIEDYIDKKM--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 165/300 (55%), Gaps = 21/300 (7%)
Query: 309 YRLKDLVSATRKFSEE------NKLGEGGFGDIYKGTLKNGKIVAVKKLA--IGISRRTL 360
Y LK++ T F E NK+GEGGFG +YKG + N VAVKKLA + I+ L
Sbjct: 18 YELKNV---TNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 361 -SDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSS-LDKFLFGEKRGSLNWK 418
F+ E+++++ H NL+ LLG S G +L LVY YM N S LD+ + L+W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 419 QRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSH 477
R I G A G+ +LHE+ H IHRDIK +N+LLD+ KI+DFGLAR + Q+
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 478 LSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAW 537
+ + GT Y APE A+ G+++ K D YSFGV++LEII+G + + E L +
Sbjct: 191 MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 249
Query: 538 RLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
E T + +D+ + N+ + E + +A C N RP + +V LL+ ++S
Sbjct: 250 IEDEEKTIEDYIDKKM--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 164/300 (54%), Gaps = 21/300 (7%)
Query: 309 YRLKDLVSATRKFSEE------NKLGEGGFGDIYKGTLKNGKIVAVKKLA--IGISRRTL 360
Y LK++ T F E NK+GEGGFG +YKG + N VAVKKLA + I+ L
Sbjct: 12 YELKNV---TNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 361 -SDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSS-LDKFLFGEKRGSLNWK 418
F+ E+++++ H NL+ LLG S G +L LVY YM N S LD+ + L+W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 419 QRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSH 477
R I G A G+ +LHE+ H IHRDIK +N+LLD+ KI+DFGLAR + Q
Sbjct: 128 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 478 LSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAW 537
+ + GT Y APE A+ G+++ K D YSFGV++LEII+G + + E L +
Sbjct: 185 MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 243
Query: 538 RLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
E T + +D+ + N+ + E + +A C N RP + +V LL+ ++S
Sbjct: 244 IEDEEKTIEDYIDKKM--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/300 (37%), Positives = 159/300 (53%), Gaps = 21/300 (7%)
Query: 309 YRLKDLVSATRKFSEE------NKLGEGGFGDIYKGTLKNGKIVAVKKLA--IGISRRTL 360
Y LK++ T F E NK GEGGFG +YKG + N VAVKKLA + I+ L
Sbjct: 9 YELKNV---TNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 361 -SDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSS-LDKFLFGEKRGSLNWK 418
F+ E+++ + H NL+ LLG S G +L LVY Y N S LD+ + L+W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 419 QRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSH 477
R I G A G+ +LHE+ H IHRDIK +N+LLD+ KI+DFGLAR + Q
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 478 LSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAW 537
++ GT Y APE A+ G+++ K D YSFGV++LEII+G + + E L +
Sbjct: 182 XXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEE 240
Query: 538 RLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
E T + +D+ N+ + E +A C N RP + +V LL+ ++S
Sbjct: 241 IEDEEKTIEDYIDKKX--NDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQEXTAS 298
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 138/278 (49%), Gaps = 29/278 (10%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSD--FENEVRLISNVHHRNLIRL 381
E KLG+G FG+++ GT VA+K L G T+S F E +++ + H L++L
Sbjct: 13 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHEKLVQL 68
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
S+ P + +V EYM+ SL FL GE L Q D+ A G+AY+ +
Sbjct: 69 YAVVSEEP-IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMN 124
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSE 501
+HRD++ +N+L+ ++L K+ADFGLARL+ +N+ + +TAPE A++G+ +
Sbjct: 125 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI 184
Query: 502 KVDAYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECT 559
K D +SFG+L+ E+ + + E L ++R +R+ C
Sbjct: 185 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------------PCP 227
Query: 560 KEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
E E + ++ C + RPT + A L+ +S
Sbjct: 228 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 265
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 142/288 (49%), Gaps = 32/288 (11%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSD--FENEVRLISNVHHRNLIRL 381
E KLG+G FG+++ GT VA+K L G T+S F E +++ + H L++L
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHEKLVQL 244
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
S+ P + +V EYM+ SL FL GE L Q D+ A G+AY+ +
Sbjct: 245 YAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMN 300
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSE 501
+HRD++ +N+L+ ++L K+ADFGLARL+ +N+ + +TAPE A++G+ +
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 502 KVDAYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECT 559
K D +SFG+L+ E+ + + E L ++R +R+ C
Sbjct: 361 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------------PCP 403
Query: 560 KEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLGNKPLLKP 607
E E + ++ C + RPT + A L+ +S +P +P
Sbjct: 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS---TEPQYQP 448
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 138/278 (49%), Gaps = 29/278 (10%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSD--FENEVRLISNVHHRNLIRL 381
E KLG+G FG+++ GT VA+K L G T+S F E +++ + H L++L
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHEKLVQL 244
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
S+ P + +V EYM+ SL FL GE L Q D+ A G+AY+ +
Sbjct: 245 YAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMN 300
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSE 501
+HRD++ +N+L+ ++L K+ADFGLARL+ +N+ + +TAPE A++G+ +
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 502 KVDAYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECT 559
K D +SFG+L+ E+ + + E L ++R +R+ C
Sbjct: 361 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------------PCP 403
Query: 560 KEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
E E + ++ C + RPT + A L+ +S
Sbjct: 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 136/273 (49%), Gaps = 29/273 (10%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSD--FENEVRLISNVHHRNLIRL 381
E KLG+G FG+++ GT VA+K L G T+S F E +++ + H L++L
Sbjct: 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHEKLVQL 327
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
S+ P + +V EYM+ SL FL GE L Q D+ A G+AY+ +
Sbjct: 328 YAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMN 383
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSE 501
+HRD++ +N+L+ ++L K+ADFGLARL+ +N+ + +TAPE A++G+ +
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 443
Query: 502 KVDAYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECT 559
K D +SFG+L+ E+ + + E L ++R +R+ C
Sbjct: 444 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------------PCP 486
Query: 560 KEAAEKVVEIALMCTQSAANSRPTMSEVVALLK 592
E E + ++ C + RPT + A L+
Sbjct: 487 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 138/278 (49%), Gaps = 29/278 (10%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSD--FENEVRLISNVHHRNLIRL 381
E KLG+G FG+++ GT VA+K L G T+S F E +++ + H L++L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKIRHEKLVQL 78
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
S+ P + +V EYM+ SL FL GE L Q D+ A G+AY+ +
Sbjct: 79 YAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSE 501
+HRD++ +N+L+ ++L K+ADFGLARL+ +N+ + +TAPE A++G+ +
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 502 KVDAYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECT 559
K D +SFG+L+ E+ + + E L ++R +R+ C
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------------PCP 237
Query: 560 KEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
E E + ++ C + RPT + A L+ +S
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 138/278 (49%), Gaps = 29/278 (10%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSD--FENEVRLISNVHHRNLIRL 381
E KLG+G FG+++ GT VA+K L G T+S F E +++ + H L++L
Sbjct: 16 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHEKLVQL 71
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
S+ P + +V EYM+ SL FL GE L Q D+ A G+AY+ +
Sbjct: 72 YAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMN 127
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSE 501
+HRD++ +N+L+ ++L K+ADFGLARL+ +N+ + +TAPE A++G+ +
Sbjct: 128 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 187
Query: 502 KVDAYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECT 559
K D +SFG+L+ E+ + + E L ++R +R+ C
Sbjct: 188 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------------PCP 230
Query: 560 KEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
E E + ++ C + RPT + A L+ +S
Sbjct: 231 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 268
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 138/278 (49%), Gaps = 29/278 (10%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSD--FENEVRLISNVHHRNLIRL 381
E KLG+G FG+++ GT VA+K L G T+S F E +++ + H L++L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHEKLVQL 78
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
S+ P + +V EYM+ SL FL GE L Q D+ A G+AY+ +
Sbjct: 79 YAVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSE 501
+HRD++ +N+L+ ++L K+ADFGLARL+ +N+ + +TAPE A++G+ +
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 502 KVDAYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECT 559
K D +SFG+L+ E+ + + E L ++R +R+ C
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------------PCP 237
Query: 560 KEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
E E + ++ C + RPT + A L+ +S
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 138/278 (49%), Gaps = 29/278 (10%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSD--FENEVRLISNVHHRNLIRL 381
E KLG+G FG+++ GT VA+K L G T+S F E +++ + H L++L
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHEKLVQL 244
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
S+ P + +V EYM+ SL FL GE L Q D+ A G+AY+ +
Sbjct: 245 YAVVSEEP-IYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMN 300
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSE 501
+HRD++ +N+L+ ++L K+ADFGLARL+ +N+ + +TAPE A++G+ +
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 502 KVDAYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECT 559
K D +SFG+L+ E+ + + E L ++R +R+ C
Sbjct: 361 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------------PCP 403
Query: 560 KEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
E E + ++ C + RPT + A L+ +S
Sbjct: 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 138/278 (49%), Gaps = 29/278 (10%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSD--FENEVRLISNVHHRNLIRL 381
E KLG+G FG+++ GT VA+K L G T+S F E +++ + H L++L
Sbjct: 14 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHEKLVQL 69
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
S+ P + +V EYM+ SL FL GE L Q D+ A G+AY+ +
Sbjct: 70 YAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 125
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSE 501
+HRD++ +N+L+ ++L K+ADFGLARL+ +N+ + +TAPE A++G+ +
Sbjct: 126 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 185
Query: 502 KVDAYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECT 559
K D +SFG+L+ E+ + + E L ++R +R+ C
Sbjct: 186 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------------PCP 228
Query: 560 KEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
E E + ++ C + RPT + A L+ +S
Sbjct: 229 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 266
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 138/278 (49%), Gaps = 29/278 (10%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSD--FENEVRLISNVHHRNLIRL 381
E KLG+G FG+++ GT VA+K L G T+S F E +++ + H L++L
Sbjct: 12 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHEKLVQL 67
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
S+ P + +V EYM+ SL FL GE L Q D+ A G+AY+ +
Sbjct: 68 YAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 123
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSE 501
+HRD++ +N+L+ ++L K+ADFGLARL+ +N+ + +TAPE A++G+ +
Sbjct: 124 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 183
Query: 502 KVDAYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECT 559
K D +SFG+L+ E+ + + E L ++R +R+ C
Sbjct: 184 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------------PCP 226
Query: 560 KEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
E E + ++ C + RPT + A L+ +S
Sbjct: 227 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 264
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 138/278 (49%), Gaps = 29/278 (10%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSD--FENEVRLISNVHHRNLIRL 381
E KLG+G FG+++ GT VA+K L G T+S F E +++ + H L++L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHEKLVQL 78
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
S+ P + +V EYM+ SL FL GE L Q D+ A G+AY+ +
Sbjct: 79 YAVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSE 501
+HRD++ +N+L+ ++L K+ADFGLARL+ +N+ + +TAPE A++G+ +
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 502 KVDAYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECT 559
K D +SFG+L+ E+ + + E L ++R +R+ C
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------------PCP 237
Query: 560 KEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
E E + ++ C + RPT + A L+ +S
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 138/278 (49%), Gaps = 29/278 (10%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSD--FENEVRLISNVHHRNLIRL 381
E KLG+G FG+++ GT VA+K L G T+S F E +++ + H L++L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHEKLVQL 78
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
S+ P + +V EYM+ SL FL GE L Q D+ A G+AY+ +
Sbjct: 79 YAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSE 501
+HRD++ +N+L+ ++L K+ADFGLARL+ +N+ + +TAPE A++G+ +
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 502 KVDAYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECT 559
K D +SFG+L+ E+ + + E L ++R +R+ C
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------------PCP 237
Query: 560 KEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
E E + ++ C + RPT + A L+ +S
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 138/278 (49%), Gaps = 29/278 (10%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSD--FENEVRLISNVHHRNLIRL 381
E KLG+G FG+++ GT VA+K L G T+S F E +++ + H L++L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHEKLVQL 78
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
S+ P + +V EYM+ SL FL GE L Q D+ A G+AY+ +
Sbjct: 79 YAVVSEEP-IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSE 501
+HRD++ +N+L+ ++L K+ADFGLARL+ +N+ + +TAPE A++G+ +
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 502 KVDAYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECT 559
K D +SFG+L+ E+ + + E L ++R +R+ C
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------------PCP 237
Query: 560 KEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
E E + ++ C + RPT + A L+ +S
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 144/283 (50%), Gaps = 38/283 (13%)
Query: 322 SEENKLGEGGFGDIYKGTLK--NGK---IVAVKKLAIGISRRTLSDFENEVRLISNVHHR 376
+ + +G G FG++YKG LK +GK VA+K L G + + DF E ++ H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHE 436
N+IRL G S+ ++++ EYM N +LDKFL EK G + Q ++ G A G+ YL
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFL-REKDGEFSVLQLVGMLRGIAAGMKYLA- 164
Query: 437 DFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLG--YTAPEYA 494
++ +HRD+ N+L++ +L K++DFGL+R+L ++ T G + +TAPE
Sbjct: 165 --NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 495 IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLD 554
+ + + D +SFG+++ E++ T GE R Y ++ E+M D
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVM-------TYGE----------RPYWELSNHEVMKAIND 265
Query: 555 ------PNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P +C + ++ + C Q RP +++V++L
Sbjct: 266 GFRLPTPMDC----PSAIYQLMMQCWQQERARRPKFADIVSIL 304
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 137/278 (49%), Gaps = 29/278 (10%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSD--FENEVRLISNVHHRNLIRL 381
E KLG+G FG+++ GT VA+K L G T+S F E +++ + H L++L
Sbjct: 20 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHEKLVQL 75
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
S+ P + +V EYM SL FL GE L Q D+ A G+AY+ +
Sbjct: 76 YAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMN 131
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSE 501
+HRD++ +N+L+ ++L K+ADFGLARL+ +N+ + +TAPE A++G+ +
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTI 191
Query: 502 KVDAYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECT 559
K D +SFG+L+ E+ + + E L ++R +R+ C
Sbjct: 192 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------------PCP 234
Query: 560 KEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
E E + ++ C + RPT + A L+ +S
Sbjct: 235 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 272
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 137/278 (49%), Gaps = 29/278 (10%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSD--FENEVRLISNVHHRNLIRL 381
E KLG+G FG+++ GT VA+K L G T+S F E +++ + H L++L
Sbjct: 20 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHEKLVQL 75
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
S+ P + +V EYM SL FL GE L Q D+ A G+AY+ +
Sbjct: 76 YAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMN 131
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSE 501
+HRD++ +N+L+ ++L K+ADFGLARL+ +N+ + +TAPE A++G+ +
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 191
Query: 502 KVDAYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECT 559
K D +SFG+L+ E+ + + E L ++R +R+ C
Sbjct: 192 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------------PCP 234
Query: 560 KEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
E E + ++ C + RPT + A L+ +S
Sbjct: 235 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 272
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 135/276 (48%), Gaps = 25/276 (9%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLG 383
E KLG+G FG+++ GT VA+K L G + F E +++ + H L++L
Sbjct: 190 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--NMSPEAFLQEAQVMKKLRHEKLVQLYA 247
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
S+ P + +V EYM+ SL FL GE L Q D+ A G+AY+ + +
Sbjct: 248 VVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 303
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKV 503
HRD++ +N+L+ ++L K+ADFGL RL+ +N+ + +TAPE A++G+ + K
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 363
Query: 504 DAYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECTKE 561
D +SFG+L+ E+ + + E L ++R +R+ C E
Sbjct: 364 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------------PCPPE 406
Query: 562 AAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
E + ++ C + RPT + A L+ +S
Sbjct: 407 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 442
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 29/278 (10%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSD--FENEVRLISNVHHRNLIRL 381
E KLG+G FG+++ GT VA+K L G T+S F E +++ + H L++L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHEKLVQL 78
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
S+ P + +V EYM+ L FL GE L Q D+ A G+AY+ +
Sbjct: 79 YAVVSEEP-IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSE 501
+HRD++ +N+L+ ++L K+ADFGLARL+ +N+ + +TAPE A++G+ +
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 502 KVDAYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECT 559
K D +SFG+L+ E+ + + E L ++R +R+ C
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------------PCP 237
Query: 560 KEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
E E + ++ C + RPT + A L+ +S
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 137/278 (49%), Gaps = 29/278 (10%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSD--FENEVRLISNVHHRNLIRL 381
E KLG+G FG+++ GT VA+K L G T+S F E +++ + H L++L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHEKLVQL 78
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
S+ P + +V EYM+ SL FL GE L Q D+ A G+AY+ +
Sbjct: 79 YAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSE 501
+HRD+ +N+L+ ++L K+ADFGLARL+ +N+ + +TAPE A++G+ +
Sbjct: 135 YVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 502 KVDAYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECT 559
K D +SFG+L+ E+ + + E L ++R +R+ C
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------------PCP 237
Query: 560 KEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
E E + ++ C + RPT + A L+ +S
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 29/278 (10%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSD--FENEVRLISNVHHRNLIRL 381
E KLG+G FG+++ GT VA+K L G T+S F E +++ + H L++L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG----TMSPEAFLQEAQVMKKLRHEKLVQL 78
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
S+ P + +V EYM+ L FL GE L Q D+ A G+AY+ +
Sbjct: 79 YAVVSEEP-IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSE 501
+HRD++ +N+L+ ++L K+ADFGLARL+ +N+ + +TAPE A++G+ +
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 502 KVDAYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECT 559
K D +SFG+L+ E+ + + E L ++R +R+ C
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-----------------PCP 237
Query: 560 KEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
E E + ++ C + RPT + A L+ +S
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 25/269 (9%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
+LG G FG+++ G VAVK L G + F E L+ + H+ L+RL
Sbjct: 22 RLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+Q P + ++ EYM N SL FL L + D+ A G+A++ E + IHR
Sbjct: 80 TQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHR 135
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDA 505
D++ +N+L+ D L KIADFGLARL+ +N+ + +TAPE +G + K D
Sbjct: 136 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 195
Query: 506 YSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECTKEAA 563
+SFG+L+ EI++ + E + L+R +R+ + P+ C
Sbjct: 196 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-------------VRPDNC----P 238
Query: 564 EKVVEIALMCTQSAANSRPTMSEVVALLK 592
E++ ++ +C + RPT + ++L+
Sbjct: 239 EELYQLMRLCWKERPEDRPTFDYLRSVLE 267
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 25/269 (9%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
+LG G FG+++ G VAVK L G + F E L+ + H+ L+RL
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+Q P + ++ EYM N SL FL L + D+ A G+A++ E + IHR
Sbjct: 84 TQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHR 139
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDA 505
D++ +N+L+ D L KIADFGLARL+ +N+ + +TAPE +G + K D
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 199
Query: 506 YSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECTKEAA 563
+SFG+L+ EI++ + E + L+R +R+ + P+ C
Sbjct: 200 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-------------VRPDNC----P 242
Query: 564 EKVVEIALMCTQSAANSRPTMSEVVALLK 592
E++ ++ +C + RPT + ++L+
Sbjct: 243 EELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 25/269 (9%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
+LG G FG+++ G VAVK L G + F E L+ + H+ L+RL
Sbjct: 29 RLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+Q P + ++ EYM N SL FL L + D+ A G+A++ E + IHR
Sbjct: 87 TQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHR 142
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDA 505
D++ +N+L+ D L KIADFGLARL+ +N+ + +TAPE +G + K D
Sbjct: 143 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 202
Query: 506 YSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECTKEAA 563
+SFG+L+ EI++ + E + L+R +R+ + P+ C
Sbjct: 203 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-------------VRPDNC----P 245
Query: 564 EKVVEIALMCTQSAANSRPTMSEVVALLK 592
E++ ++ +C + RPT + ++L+
Sbjct: 246 EELYQLMRLCWKERPEDRPTFDYLRSVLE 274
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 25/269 (9%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
+LG G FG+++ G VAVK L G + F E L+ + H+ L+RL
Sbjct: 28 RLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+Q P + ++ EYM N SL FL L + D+ A G+A++ E + IHR
Sbjct: 86 TQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHR 141
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDA 505
D++ +N+L+ D L KIADFGLARL+ +N+ + +TAPE +G + K D
Sbjct: 142 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 201
Query: 506 YSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECTKEAA 563
+SFG+L+ EI++ + E + L+R +R+ + P+ C
Sbjct: 202 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-------------VRPDNC----P 244
Query: 564 EKVVEIALMCTQSAANSRPTMSEVVALLK 592
E++ ++ +C + RPT + ++L+
Sbjct: 245 EELYQLMRLCWKERPEDRPTFDYLRSVLE 273
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 25/269 (9%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
+LG G FG+++ G VAVK L G + F E L+ + H+ L+RL
Sbjct: 21 RLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+Q P + ++ EYM N SL FL L + D+ A G+A++ E + IHR
Sbjct: 79 TQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHR 134
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDA 505
D++ +N+L+ D L KIADFGLARL+ +N+ + +TAPE +G + K D
Sbjct: 135 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 194
Query: 506 YSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECTKEAA 563
+SFG+L+ EI++ + E + L+R +R+ + P+ C
Sbjct: 195 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-------------VRPDNC----P 237
Query: 564 EKVVEIALMCTQSAANSRPTMSEVVALLK 592
E++ ++ +C + RPT + ++L+
Sbjct: 238 EELYQLMRLCWKERPEDRPTFDYLRSVLE 266
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 25/269 (9%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
+LG G FG+++ G VAVK L G + F E L+ + H+ L+RL
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+Q P + ++ EYM N SL FL L + D+ A G+A++ E + IHR
Sbjct: 78 TQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHR 133
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDA 505
D++ +N+L+ D L KIADFGLARL+ +N+ + +TAPE +G + K D
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 506 YSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECTKEAA 563
+SFG+L+ EI++ + E + L+R +R+ + P+ C
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-------------VRPDNC----P 236
Query: 564 EKVVEIALMCTQSAANSRPTMSEVVALLK 592
E++ ++ +C + RPT + ++L+
Sbjct: 237 EELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 25/269 (9%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
+LG G FG+++ G VAVK L G + F E L+ + H+ L+RL
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+Q P + ++ EYM N SL FL L + D+ A G+A++ E + IHR
Sbjct: 78 TQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHR 133
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDA 505
D++ +N+L+ D L KIADFGLARL+ +N+ + +TAPE +G + K D
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 506 YSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECTKEAA 563
+SFG+L+ EI++ + E + L+R +R+ + P+ C
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-------------VRPDNC----P 236
Query: 564 EKVVEIALMCTQSAANSRPTMSEVVALLK 592
E++ ++ +C + RPT + ++L+
Sbjct: 237 EELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 25/269 (9%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
+LG G FG+++ G VAVK L G + F E L+ + H+ L+RL
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+Q P + ++ EYM N SL FL L + D+ A G+A++ E + IHR
Sbjct: 84 TQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHR 139
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDA 505
D++ +N+L+ D L KIADFGLARL+ +N+ + +TAPE +G + K D
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 199
Query: 506 YSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECTKEAA 563
+SFG+L+ EI++ + E + L+R +R+ + P+ C
Sbjct: 200 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-------------VRPDNC----P 242
Query: 564 EKVVEIALMCTQSAANSRPTMSEVVALLK 592
E++ ++ +C + RPT + ++L+
Sbjct: 243 EELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 25/269 (9%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
+LG G FG+++ G VAVK L G + F E L+ + H+ L+RL
Sbjct: 25 RLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+Q P + ++ EYM N SL FL L + D+ A G+A++ E + IHR
Sbjct: 83 TQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHR 138
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDA 505
D++ +N+L+ D L KIADFGLARL+ +N+ + +TAPE +G + K D
Sbjct: 139 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 198
Query: 506 YSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECTKEAA 563
+SFG+L+ EI++ + E + L+R +R+ + P+ C
Sbjct: 199 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-------------VRPDNC----P 241
Query: 564 EKVVEIALMCTQSAANSRPTMSEVVALLK 592
E++ ++ +C + RPT + ++L+
Sbjct: 242 EELYQLMRLCWKERPEDRPTFDYLRSVLE 270
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 25/269 (9%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
+LG G FG+++ G VAVK L G + F E L+ + H+ L+RL
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+Q P + ++ EYM N SL FL L + D+ A G+A++ E + IHR
Sbjct: 78 TQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHR 133
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDA 505
D++ +N+L+ D L KIADFGLARL+ +N+ + +TAPE +G + K D
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 506 YSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECTKEAA 563
+SFG+L+ EI++ + E + L+R +R+ + P+ C
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-------------VRPDNC----P 236
Query: 564 EKVVEIALMCTQSAANSRPTMSEVVALLK 592
E++ ++ +C + RPT + ++L+
Sbjct: 237 EELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 25/269 (9%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
+LG G FG+++ G VAVK L G + F E L+ + H+ L+RL
Sbjct: 30 RLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+Q P + ++ EYM N SL FL L + D+ A G+A++ E + IHR
Sbjct: 88 TQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHR 143
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDA 505
D++ +N+L+ D L KIADFGLARL+ +N+ + +TAPE +G + K D
Sbjct: 144 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 203
Query: 506 YSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECTKEAA 563
+SFG+L+ EI++ + E + L+R +R+ + P+ C
Sbjct: 204 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-------------VRPDNC----P 246
Query: 564 EKVVEIALMCTQSAANSRPTMSEVVALLK 592
E++ ++ +C + RPT + ++L+
Sbjct: 247 EELYQLMRLCWKERPEDRPTFDYLRSVLE 275
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 25/269 (9%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
+LG G FG+++ G VAVK L G + F E L+ + H+ L+RL
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+Q P + ++ EYM N SL FL L + D+ A G+A++ E + IHR
Sbjct: 73 TQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHR 128
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDA 505
D++ +N+L+ D L KIADFGLARL+ +N+ + +TAPE +G + K D
Sbjct: 129 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 188
Query: 506 YSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECTKEAA 563
+SFG+L+ EI++ + E + L+R +R+ + P+ C
Sbjct: 189 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-------------VRPDNC----P 231
Query: 564 EKVVEIALMCTQSAANSRPTMSEVVALLK 592
E++ ++ +C + RPT + ++L+
Sbjct: 232 EELYQLMRLCWKERPEDRPTFDYLRSVLE 260
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 132/269 (49%), Gaps = 25/269 (9%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
+LG G FG+++ G VAVK L G + F E L+ + H+ L+RL
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+Q P + ++ EYM N SL FL L + D+ A G+A++ E + IHR
Sbjct: 74 TQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHR 129
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDA 505
+++ +N+L+ D L KIADFGLARL+ +N+ + +TAPE +G + K D
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 189
Query: 506 YSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECTKEAA 563
+SFG+L+ EI++ + E + L+R +R+ + P+ C
Sbjct: 190 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-------------VRPDNC----P 232
Query: 564 EKVVEIALMCTQSAANSRPTMSEVVALLK 592
E++ ++ +C + RPT + ++L+
Sbjct: 233 EELYQLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 129/269 (47%), Gaps = 24/269 (8%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
+LG G FG+++ G N VAVK L G ++ F E L+ + H L+RL
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM--SVQAFLEEANLMKTLQHDKLVRLYAV 76
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
++ + ++ EYMA SL FL ++ G + + D A G+AY+ + IH
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY---IH 133
Query: 445 RDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVD 504
RD++ +NVL+ + L KIADFGLAR++ +N+ + +TAPE G + K D
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSD 193
Query: 505 AYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECTKEA 562
+SFG+L+ EI++ K + + L + +R+ P +
Sbjct: 194 VWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRM---------------PR--VENC 236
Query: 563 AEKVVEIALMCTQSAANSRPTMSEVVALL 591
+++ +I MC + A RPT + ++L
Sbjct: 237 PDELYDIMKMCWKEKAEERPTFDYLQSVL 265
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 134/285 (47%), Gaps = 47/285 (16%)
Query: 324 ENKLGEGGFGDIYKGTLK-NGK---IVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
E +G G FG++ G LK GK VA+K L +G + + DF E ++ H N+I
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L G ++ +++V EYM N SLD FL + G Q ++ G + G+ YL + +
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFL-KKNDGQFTVIQLVGMLRGISAGMKYLSDMGY 145
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLG--YTAPEYAIHG 497
V HRD+ N+L++ +L K++DFGL+R+L ++ T G + +TAPE
Sbjct: 146 V---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFR 202
Query: 498 QLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESL---- 553
+ + D +S+G+++ E++S Y +WE+ ++ +
Sbjct: 203 KFTSASDVWSYGIVMWEVVS----------------------YGERPYWEMTNQDVIKAV 240
Query: 554 -------DPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P +C + ++ L C Q NSRP E+V +L
Sbjct: 241 EEGYRLPSPMDCPA----ALYQLMLDCWQKERNSRPKFDEIVNML 281
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 131/269 (48%), Gaps = 25/269 (9%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
+LG G FG+++ GT VA+K L G + F E +++ + H L++L
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKPGTM--SPESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
S+ P + +V EYM SL FL + +L D+ A G+AY+ + IHR
Sbjct: 74 SEEP-IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHR 129
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDA 505
D++ +N+L+ + L KIADFGLARL+ +N+ + +TAPE A++G+ + K D
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 506 YSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECTKEAA 563
+SFG+L+ E+++ + E L ++R +R+ C ++
Sbjct: 190 WSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM-----------------PCPQDCP 232
Query: 564 EKVVEIALMCTQSAANSRPTMSEVVALLK 592
+ E+ + C + RPT + + L+
Sbjct: 233 ISLHELMIHCWKKDPEERPTFEYLQSFLE 261
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 129/271 (47%), Gaps = 28/271 (10%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
KLG G FG+++ G N VAVK L G ++ F E L+ + H L+RL
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT--MSVQAFLEEANLMKTLQHDKLVRLYAV 75
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
++ + ++ E+MA SL FL ++ G + + D A G+AY+ + IH
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY---IH 132
Query: 445 RDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVD 504
RD++ +NVL+ + L KIADFGLAR++ +N+ + +TAPE G + K +
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSN 192
Query: 505 AYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRL--YENGTHWELMDESLDPNECTK 560
+SFG+L+ EI++ K + + L + +R+ EN C
Sbjct: 193 VWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMEN---------------CPD 237
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
E + +I MC + A RPT + ++L
Sbjct: 238 E----LYDIMKMCWKEKAEERPTFDYLQSVL 264
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 130/269 (48%), Gaps = 25/269 (9%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
+LG G G+++ G VAVK L G + F E L+ + H+ L+RL
Sbjct: 20 RLGAGQAGEVWMGYYNGHTKVAVKSLKQG--SMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+Q P + ++ EYM N SL FL L + D+ A G+A++ E + IHR
Sbjct: 78 TQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHR 133
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDA 505
D++ +N+L+ D L KIADFGLARL+ + + + +TAPE +G + K D
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 506 YSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECTKEAA 563
+SFG+L+ EI++ + E + L+R +R+ + P+ C
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM-------------VRPDNC----P 236
Query: 564 EKVVEIALMCTQSAANSRPTMSEVVALLK 592
E++ ++ +C + RPT + ++L+
Sbjct: 237 EELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 137/288 (47%), Gaps = 47/288 (16%)
Query: 321 FSEENKLGEGGFGDIYKGTLK---NGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHR 376
S + +G G FG++ G LK +I VA+K L +G + + DF E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHE 436
N+IRL G ++ +++V EYM N SLD FL + Q ++ G A G+ YL +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 437 DFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLG--YTAPEYA 494
+V HRD+ N+L++ +L K++DFGLAR+L ++ T G + +T+PE
Sbjct: 166 MGYV---HRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 495 IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESL- 553
+ + + D +S+G+++ E++S Y +WE+ ++ +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS----------------------YGERPYWEMSNQDVI 260
Query: 554 ----------DPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P +C + ++ L C Q N+RP ++V++L
Sbjct: 261 KAVDEGYRLPPPMDC----PAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 47/288 (16%)
Query: 321 FSEENKLGEGGFGDIYKGTLK---NGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHR 376
S + +G G FG++ G LK +I VA+K L +G + + DF E ++ H
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHE 436
N+IRL G ++ +++V EYM N SLD FL + Q ++ G A G+ YL +
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYLSD 136
Query: 437 DFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLG--YTAPEYA 494
+V HRD+ N+L++ +L K++DFGL+R+L ++ T G + +T+PE
Sbjct: 137 MGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 495 IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESL- 553
+ + + D +S+G+++ E++S Y +WE+ ++ +
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMS----------------------YGERPYWEMSNQDVI 231
Query: 554 ----------DPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P +C + ++ L C Q N+RP ++V++L
Sbjct: 232 KAVDEGYRLPPPMDC----PAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 47/288 (16%)
Query: 321 FSEENKLGEGGFGDIYKGTLK---NGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHR 376
S + +G G FG++ G LK +I VA+K L +G + + DF E ++ H
Sbjct: 35 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 94
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHE 436
N+IRL G ++ +++V EYM N SLD FL + Q ++ G A G+ YL +
Sbjct: 95 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYLSD 153
Query: 437 DFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLG--YTAPEYA 494
+V HRD+ N+L++ +L K++DFGL+R+L ++ T G + +T+PE
Sbjct: 154 MGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 210
Query: 495 IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESL- 553
+ + + D +S+G+++ E++S Y +WE+ ++ +
Sbjct: 211 AYRKFTSASDVWSYGIVLWEVMS----------------------YGERPYWEMSNQDVI 248
Query: 554 ----------DPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P +C + ++ L C Q N+RP ++V++L
Sbjct: 249 KAVDEGYRLPPPMDC----PAALYQLMLDCWQKDRNNRPKFEQIVSIL 292
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 137/288 (47%), Gaps = 47/288 (16%)
Query: 321 FSEENKLGEGGFGDIYKGTLK---NGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHR 376
S + +G G FG++ G LK +I VA+K L +G + + DF E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHE 436
N+IRL G ++ +++V EYM N SLD FL + Q ++ G A G+ YL +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 437 DFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLG--YTAPEYA 494
+ +HRD+ N+L++ +L K++DFGL+R+L ++ T G + +T+PE
Sbjct: 166 ---MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 495 IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESL- 553
+ + + D +S+G+++ E++S Y +WE+ ++ +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS----------------------YGERPYWEMSNQDVI 260
Query: 554 ----------DPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P +C + ++ L C Q N+RP ++V++L
Sbjct: 261 KAVDEGYRLPPPMDC----PAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 141/319 (44%), Gaps = 38/319 (11%)
Query: 303 LQGPVNYRLKDLVSATRKFSEENKLGEGGFGDI----YKGTLK-NGKIVAVKKLAIGISR 357
QGP + V R + LGEG FG + Y T G++VAVK L
Sbjct: 19 FQGPGD----PTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGP 74
Query: 358 RTLSDFENEVRLISNVHHRNLIRLLGCCSQG--PELILVYEYMANSSLDKFLFGEKRGSL 415
+ S ++ E+ ++ ++H ++I+ GCC L LV EY+ SL +L R S+
Sbjct: 75 QHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHSI 131
Query: 416 NWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQ 475
Q G+AYLH + IHRD+ NVLLD+D KI DFGLA+ +PE
Sbjct: 132 GLAQLLLFAQQICEGMAYLHAQHY---IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188
Query: 476 SHLSTKFAG--TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKG------- 526
+ G + + APE + D +SFGV + E+++ SS++
Sbjct: 189 EXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELI 248
Query: 527 --EEGEYLLKRAWRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTM 584
+G+ + R L E G + P++C E V + C ++ A+ RPT
Sbjct: 249 GIAQGQMTVLRLTELLERG------ERLPRPDKCPAE----VYHLMKNCWETEASFRPTF 298
Query: 585 SEVVALLKSTSSSLLGNKP 603
++ +LK+ G P
Sbjct: 299 ENLIPILKTVHEKYQGQAP 317
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 47/288 (16%)
Query: 321 FSEENKLGEGGFGDIYKGTLK---NGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHR 376
S + +G G FG++ G LK +I VA+K L +G + + DF E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHE 436
N+IRL G ++ +++V EYM N SLD FL + Q ++ G A G+ YL +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 437 DFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLG--YTAPEYA 494
+V HRD+ N+L++ +L K++DFGL+R+L ++ T G + +T+PE
Sbjct: 166 MGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 495 IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESL- 553
+ + + D +S+G+++ E++S Y +WE+ ++ +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS----------------------YGERPYWEMSNQDVI 260
Query: 554 ----------DPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P +C + ++ L C Q N+RP ++V++L
Sbjct: 261 KAVDEGYRLPPPMDC----PAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 47/288 (16%)
Query: 321 FSEENKLGEGGFGDIYKGTLK---NGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHR 376
S + +G G FG++ G LK +I VA+K L +G + + DF E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHE 436
N+IRL G ++ +++V EYM N SLD FL + Q ++ G A G+ YL +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 437 DFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLG--YTAPEYA 494
+V HRD+ N+L++ +L K++DFGL+R+L ++ T G + +T+PE
Sbjct: 166 MGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 495 IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESL- 553
+ + + D +S+G+++ E++S Y +WE+ ++ +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS----------------------YGERPYWEMSNQDVI 260
Query: 554 ----------DPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P +C + ++ L C Q N+RP ++V++L
Sbjct: 261 KAVDEGYRLPPPMDC----PAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 47/288 (16%)
Query: 321 FSEENKLGEGGFGDIYKGTLK---NGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHR 376
S + +G G FG++ G LK +I VA+K L +G + + DF E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHE 436
N+IRL G ++ +++V EYM N SLD FL + Q ++ G A G+ YL +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 437 DFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLG--YTAPEYA 494
+V HRD+ N+L++ +L K++DFGL+R+L ++ T G + +T+PE
Sbjct: 166 MGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 495 IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESL- 553
+ + + D +S+G+++ E++S Y +WE+ ++ +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS----------------------YGERPYWEMSNQDVI 260
Query: 554 ----------DPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P +C + ++ L C Q N+RP ++V++L
Sbjct: 261 KAVDEGYRLPPPMDC----PAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 47/288 (16%)
Query: 321 FSEENKLGEGGFGDIYKGTLK---NGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHR 376
S + +G G FG++ G LK +I VA+K L +G + + DF E ++ H
Sbjct: 45 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 104
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHE 436
N+IRL G ++ +++V EYM N SLD FL + Q ++ G A G+ YL +
Sbjct: 105 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYLSD 163
Query: 437 DFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLG--YTAPEYA 494
+V HRD+ N+L++ +L K++DFGL+R+L ++ T G + +T+PE
Sbjct: 164 MGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 220
Query: 495 IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESL- 553
+ + + D +S+G+++ E++S Y +WE+ ++ +
Sbjct: 221 AYRKFTSASDVWSYGIVLWEVMS----------------------YGERPYWEMSNQDVI 258
Query: 554 ----------DPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P +C + ++ L C Q N+RP ++V++L
Sbjct: 259 KAVDEGYRLPPPMDC----PAALYQLMLDCWQKDRNNRPKFEQIVSIL 302
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 47/288 (16%)
Query: 321 FSEENKLGEGGFGDIYKGTLK---NGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHR 376
S + +G G FG++ G LK +I VA+K L +G + + DF E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHE 436
N+IRL G ++ +++V EYM N SLD FL + Q ++ G A G+ YL +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 437 DFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLG--YTAPEYA 494
+V HRD+ N+L++ +L K++DFGL+R+L ++ T G + +T+PE
Sbjct: 166 MGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 495 IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESL- 553
+ + + D +S+G+++ E++S Y +WE+ ++ +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS----------------------YGERPYWEMSNQDVI 260
Query: 554 ----------DPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P +C + ++ L C Q N+RP ++V++L
Sbjct: 261 KAVDEGYRLPPPMDC----PAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 136/288 (47%), Gaps = 47/288 (16%)
Query: 321 FSEENKLGEGGFGDIYKGTLK---NGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHR 376
S + +G G FG++ G LK +I VA+K L +G + + DF E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHE 436
N+IRL G ++ +++V EYM N SLD FL + Q ++ G A G+ YL +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 437 DFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLG--YTAPEYA 494
+ +HRD+ N+L++ +L K++DFGL R+L ++ T G + +T+PE
Sbjct: 166 ---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 495 IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESL- 553
+ + + D +S+G+++ E++S Y +WE+ ++ +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS----------------------YGERPYWEMSNQDVI 260
Query: 554 ----------DPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P +C + ++ L C Q N+RP ++V++L
Sbjct: 261 KAVDEGYRLPPPMDC----PAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 136/289 (47%), Gaps = 53/289 (18%)
Query: 324 ENKLGEGGFGDIYKGTLK-NGK---IVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
E +G G FG++ +G LK GK VA+K L G + R +F +E ++ H N+I
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
RL G + ++++ E+M N +LD FL G Q ++ G A G+ YL E +
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFL-RLNDGQFTVIQLVGMLRGIASGMRYLAEMSY 137
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLG------YTAPEY 493
V HRD+ N+L++ +L K++DFGL+R L EN S + +LG +TAPE
Sbjct: 138 V---HRDLAARNILVNSNLVCKVSDFGLSRFLEENSS--DPTYTSSLGGKIPIRWTAPEA 192
Query: 494 AIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESL 553
+ + DA+S+G+++ E++S + +W++ ++ +
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMS----------------------FGERPYWDMSNQDV 230
Query: 554 -----------DPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P +C + ++ L C Q N+RP +VV+ L
Sbjct: 231 INAIEQDYRLPPPPDCPT----SLHQLMLDCWQKDRNARPRFPQVVSAL 275
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 136/288 (47%), Gaps = 47/288 (16%)
Query: 321 FSEENKLGEGGFGDIYKGTLK---NGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHR 376
S + +G G FG++ G LK +I VA+K L +G + + DF E ++ H
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHE 436
N+IRL G ++ +++V E M N SLD FL + Q ++ G A G+ YL +
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYLSD 136
Query: 437 DFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLG--YTAPEYA 494
+V HRD+ N+L++ +L K++DFGL+R+L ++ T G + +T+PE
Sbjct: 137 MGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 495 IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESL- 553
+ + + D +S+G+++ E++S Y +WE+ ++ +
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMS----------------------YGERPYWEMSNQDVI 231
Query: 554 ----------DPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P +C + ++ L C Q N+RP ++V++L
Sbjct: 232 KAVDEGYRLPPPMDC----PAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 138/278 (49%), Gaps = 31/278 (11%)
Query: 324 ENKLGEGGFGDIYKGTLK-NGK---IVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
E +G G FG++ +G LK GK VA+K L G + R +F +E ++ H N+I
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
RL G + ++++ E+M N +LD FL G Q ++ G A G+ YL E
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFL-RLNDGQFTVIQLVGMLRGIASGMRYLAE--- 136
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHL--STKFAGTLG--YTAPEYAI 495
+ +HRD+ N+L++ +L K++DFGL+R L EN S ++ G + +TAPE
Sbjct: 137 MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 496 HGQLSEKVDAYSFGVLVLEIISGTKSS--ETKGEEGEYLLKRAWRLYENGTHWELMDESL 553
+ + DA+S+G+++ E++S + + ++ +++ +RL
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPP------------ 244
Query: 554 DPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P +C + ++ L C Q N+RP +VV+ L
Sbjct: 245 -PPDCPT----SLHQLMLDCWQKDRNARPRFPQVVSAL 277
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 136/288 (47%), Gaps = 47/288 (16%)
Query: 321 FSEENKLGEGGFGDIYKGTLK---NGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHR 376
S + +G G FG++ G LK +I VA+K L +G + + DF E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHE 436
N+IRL G ++ +++V E M N SLD FL + Q ++ G A G+ YL +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 437 DFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLG--YTAPEYA 494
+ +HRD+ N+L++ +L K++DFGL+R+L ++ T G + +T+PE
Sbjct: 166 ---MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 495 IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESL- 553
+ + + D +S+G+++ E++S Y +WE+ ++ +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS----------------------YGERPYWEMSNQDVI 260
Query: 554 ----------DPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P +C + ++ L C Q N+RP ++V++L
Sbjct: 261 KAVDEGYRLPPPMDC----PAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 136/288 (47%), Gaps = 47/288 (16%)
Query: 321 FSEENKLGEGGFGDIYKGTLK---NGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHR 376
S + +G G FG++ G LK +I VA+K L +G + + DF E ++ H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHE 436
N+IRL G ++ +++V E M N SLD FL + Q ++ G A G+ YL +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 437 DFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLG--YTAPEYA 494
+V HRD+ N+L++ +L K++DFGL+R+L ++ T G + +T+PE
Sbjct: 166 MGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 495 IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESL- 553
+ + + D +S+G+++ E++S Y +WE+ ++ +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS----------------------YGERPYWEMSNQDVI 260
Query: 554 ----------DPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P +C + ++ L C Q N+RP ++V++L
Sbjct: 261 KAVDEGYRLPPPMDC----PAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 137/298 (45%), Gaps = 34/298 (11%)
Query: 315 VSATRKFSEENKLGEGGFGDI----YKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRL 369
V R + LGEG FG + Y T G++VAVK L + S ++ E+ +
Sbjct: 10 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDI 69
Query: 370 ISNVHHRNLIRLLGCCSQGPE--LILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGT 427
+ ++H ++I+ GCC E L LV EY+ SL +L R S+ Q
Sbjct: 70 LRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQI 126
Query: 428 ARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--T 485
G+AYLH + IHR++ NVLLD+D KI DFGLA+ +PE + + G
Sbjct: 127 CEGMAYLHSQHY---IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 486 LGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKG---------EEGEYLLKRA 536
+ + APE + D +SFGV + E+++ SS++ +G+ + R
Sbjct: 184 VFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRL 243
Query: 537 WRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKST 594
L E G + P++C E V + C ++ A+ RPT ++ +LK+
Sbjct: 244 TELLERG------ERLPRPDKCPCE----VYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 129/270 (47%), Gaps = 25/270 (9%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLG 383
E KLG G FG+++ T VAVK + G ++ F E ++ + H L++L
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--SMSVEAFLAEANVMKTLQHDKLVKLHA 77
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
++ P + ++ E+MA SL FL ++ + D A G+A++ + + I
Sbjct: 78 VVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY---I 133
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKV 503
HRD++ +N+L+ L KIADFGLAR++ +N+ + +TAPE G + K
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 193
Query: 504 DAYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECTKE 561
D +SFG+L++EI++ + E + L+R +R+ P C
Sbjct: 194 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR-------------PENC--- 237
Query: 562 AAEKVVEIALMCTQSAANSRPTMSEVVALL 591
E++ I + C ++ RPT + ++L
Sbjct: 238 -PEELYNIMMRCWKNRPEERPTFEYIQSVL 266
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 137/298 (45%), Gaps = 34/298 (11%)
Query: 315 VSATRKFSEENKLGEGGFGDI----YKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRL 369
V R + LGEG FG + Y T G++VAVK L + S ++ E+ +
Sbjct: 10 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDI 69
Query: 370 ISNVHHRNLIRLLGCCSQGPE--LILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGT 427
+ ++H ++I+ GCC E L LV EY+ SL +L R S+ Q
Sbjct: 70 LRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQI 126
Query: 428 ARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--T 485
G+AYLH + IHR++ NVLLD+D KI DFGLA+ +PE + + G
Sbjct: 127 CEGMAYLHAQHY---IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 486 LGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKG---------EEGEYLLKRA 536
+ + APE + D +SFGV + E+++ SS++ +G+ + R
Sbjct: 184 VFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRL 243
Query: 537 WRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKST 594
L E G + P++C E V + C ++ A+ RPT ++ +LK+
Sbjct: 244 TELLERG------ERLPRPDKCPCE----VYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 129/270 (47%), Gaps = 25/270 (9%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLG 383
E KLG G FG+++ T VAVK + G ++ F E ++ + H L++L
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--SMSVEAFLAEANVMKTLQHDKLVKLHA 250
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
++ P + ++ E+MA SL FL ++ + D A G+A++ + + I
Sbjct: 251 VVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY---I 306
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKV 503
HRD++ +N+L+ L KIADFGLAR++ +N+ + +TAPE G + K
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 366
Query: 504 DAYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECTKE 561
D +SFG+L++EI++ + E + L+R +R+ P C
Sbjct: 367 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR-------------PENC--- 410
Query: 562 AAEKVVEIALMCTQSAANSRPTMSEVVALL 591
E++ I + C ++ RPT + ++L
Sbjct: 411 -PEELYNIMMRCWKNRPEERPTFEYIQSVL 439
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 103/200 (51%), Gaps = 10/200 (5%)
Query: 324 ENKLGEGGFGDIYKGTLK----NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
E +G G G++ G L+ VA+K L G + R DF +E ++ H N+I
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
RL G ++G ++V EYM N SLD FL G Q ++ G G+ YL +
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSD--- 169
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLG--YTAPEYAIHG 497
+ +HRD+ NVL+D +L K++DFGL+R+L ++ T G + +TAPE
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFR 229
Query: 498 QLSEKVDAYSFGVLVLEIIS 517
S D +SFGV++ E+++
Sbjct: 230 TFSSASDVWSFGVVMWEVLA 249
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 103/200 (51%), Gaps = 10/200 (5%)
Query: 324 ENKLGEGGFGDIYKGTLK----NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
E +G G G++ G L+ VA+K L G + R DF +E ++ H N+I
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
RL G ++G ++V EYM N SLD FL G Q ++ G G+ YL +
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSD--- 169
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLG--YTAPEYAIHG 497
+ +HRD+ NVL+D +L K++DFGL+R+L ++ T G + +TAPE
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFR 229
Query: 498 QLSEKVDAYSFGVLVLEIIS 517
S D +SFGV++ E+++
Sbjct: 230 TFSSASDVWSFGVVMWEVLA 249
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 145/307 (47%), Gaps = 50/307 (16%)
Query: 309 YRLKDLVSATRKFSEE---------NKLGEGGFGDIYKGTLK-NGK---IVAVKKLAIGI 355
+ +D A R+F++E +G G FG++ G LK GK VA+K L G
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 356 SRRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSL 415
+ + DF +E ++ H N+I L G ++ ++++ E+M N SLD FL + G
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL-RQNDGQF 132
Query: 416 NWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQ 475
Q ++ G A G+ YL + + +HRD+ N+L++ +L K++DFGL+R L ++
Sbjct: 133 TVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 189
Query: 476 SHLSTKFAGTLG------YTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEG 529
S + LG +TAPE + + + D +S+G+++ E++S GE
Sbjct: 190 S--DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS-------YGE-- 238
Query: 530 EYLLKRAWRLYENGTHWELM-----DESLDPNECTKEAAEKVVEIALMCTQSAANSRPTM 584
R Y + T+ +++ D L P + + ++ L C Q N RP
Sbjct: 239 --------RPYWDMTNQDVINAIEQDYRLPP---PMDCPSALHQLMLDCWQKDRNHRPKF 287
Query: 585 SEVVALL 591
++V L
Sbjct: 288 GQIVNTL 294
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 135/285 (47%), Gaps = 47/285 (16%)
Query: 324 ENKLGEGGFGDIYKGTLK-NGK---IVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
E +G G FG++ G LK GK VA+K L +G + + DF E ++ H N++
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L G ++G +++V E+M N +LD FL + G Q ++ G A G+ YL +
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFL-RKHDGQFTVIQLVGMLRGIAAGMRYLAD--- 163
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLG--YTAPEYAIHG 497
+ +HRD+ N+L++ +L K++DFGL+R++ ++ + T G + +TAPE +
Sbjct: 164 MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYR 223
Query: 498 QLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESL---- 553
+ + D +S+G+++ E++S Y +W++ ++ +
Sbjct: 224 KFTSASDVWSYGIVMWEVMS----------------------YGERPYWDMSNQDVIKAI 261
Query: 554 -------DPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P +C + ++ L C Q RP ++V +L
Sbjct: 262 EEGYRLPAPMDCPA----GLHQLMLDCWQKERAERPKFEQIVGIL 302
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 109/195 (55%), Gaps = 7/195 (3%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKIVAVKKLA-IGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+ K+G G FG +++ +G VAVK L +++F EV ++ + H N++ +
Sbjct: 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGE-KRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
G +Q P L +V EY++ SL + L R L+ ++R + A+G+ YLH + +
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPP 159
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTK-FAGTLGYTAPEYAIHGQLS 500
I+HR++K N+L+D K+ DFGL+RL + + LS+K AGT + APE +
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPSN 217
Query: 501 EKVDAYSFGVLVLEI 515
EK D YSFGV++ E+
Sbjct: 218 EKSDVYSFGVILWEL 232
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 138/299 (46%), Gaps = 34/299 (11%)
Query: 315 VSATRKFSEENKLGEGGFGDI----YKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRL 369
V R + LGEG FG + Y T G++VAVK L G + S ++ E+ +
Sbjct: 4 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEI 63
Query: 370 ISNVHHRNLIRLLGCCS-QGPELI-LVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGT 427
+ ++H ++++ GCC QG + + LV EY+ SL +L R + Q
Sbjct: 64 LRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQI 120
Query: 428 ARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--T 485
G+AYLH + IHR + NVLLD+D KI DFGLA+ +PE + + G
Sbjct: 121 CEGMAYLHAQHY---IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 177
Query: 486 LGYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS--------GTKSSETKGE-EGEYLLKRA 536
+ + APE + D +SFGV + E+++ TK +E G +G+ + R
Sbjct: 178 VFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRL 237
Query: 537 WRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTS 595
L E G + P+ C E + + C ++ A+ RPT +V +L++
Sbjct: 238 TELLERG------ERLPRPDRCPCE----IYHLMKNCWETEASFRPTFQNLVPILQTAQ 286
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 107/195 (54%), Gaps = 7/195 (3%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKIVAVKKLA-IGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+ K+G G FG +++ +G VAVK L +++F EV ++ + H N++ +
Sbjct: 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGE-KRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
G +Q P L +V EY++ SL + L R L+ ++R + A+G+ YLH + +
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPP 159
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKF-AGTLGYTAPEYAIHGQLS 500
I+HRD+K N+L+D K+ DFGL+RL + L +K AGT + APE +
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSN 217
Query: 501 EKVDAYSFGVLVLEI 515
EK D YSFGV++ E+
Sbjct: 218 EKSDVYSFGVILWEL 232
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 138/297 (46%), Gaps = 34/297 (11%)
Query: 315 VSATRKFSEENKLGEGGFGDI----YKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRL 369
V R + LGEG FG + Y T G++VAVK L G + S ++ E+ +
Sbjct: 5 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEI 64
Query: 370 ISNVHHRNLIRLLGCCS-QGPELI-LVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGT 427
+ ++H ++++ GCC QG + + LV EY+ SL +L R + Q
Sbjct: 65 LRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQI 121
Query: 428 ARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--T 485
G+AYLH + IHR + NVLLD+D KI DFGLA+ +PE + + G
Sbjct: 122 CEGMAYLHAQHY---IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 178
Query: 486 LGYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS--------GTKSSETKGE-EGEYLLKRA 536
+ + APE + D +SFGV + E+++ TK +E G +G+ + R
Sbjct: 179 VFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRL 238
Query: 537 WRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKS 593
L E G + P+ C E + + C ++ A+ RPT +V +L++
Sbjct: 239 TELLERG------ERLPRPDRCPCE----IYHLMKNCWETEASFRPTFQNLVPILQT 285
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 25/267 (9%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G +G++Y+G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 80
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C++ P ++ E+M +L +L R +N + + + YL +
Sbjct: 81 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 137
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPEN--QSHLSTKFAGTLGYTAPEYAIHGQLS 500
IHRD+ N L+ ++ K+ADFGL+RL+ + +H KF + +TAPE + + S
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYNKFS 195
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
K D ++FGVL+ EI + S + L + + L E E P C
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRME------RPEGC-- 242
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEV 587
EKV E+ C Q + RP+ +E+
Sbjct: 243 --PEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 25/267 (9%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G +G++Y+G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 80
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C++ P ++ E+M +L +L R +N + + + YL +
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 137
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPEN--QSHLSTKFAGTLGYTAPEYAIHGQLS 500
IHRD+ N L+ ++ K+ADFGL+RL+ + +H KF + +TAPE + + S
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYNKFS 195
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
K D ++FGVL+ EI + S + L + + L E E P C
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRME------RPEGC-- 242
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEV 587
EKV E+ C Q + RP+ +E+
Sbjct: 243 --PEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 25/267 (9%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G +G++Y+G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 80
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C++ P ++ E+M +L +L R +N + + + YL +
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 137
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPEN--QSHLSTKFAGTLGYTAPEYAIHGQLS 500
IHRD+ N L+ ++ K+ADFGL+RL+ + +H KF + +TAPE + + S
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFS 195
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
K D ++FGVL+ EI + S + L + + L E E P C
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRME------RPEGC-- 242
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEV 587
EKV E+ C Q + RP+ +E+
Sbjct: 243 --PEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 25/267 (9%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G +G++Y+G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 22 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 79
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C++ P ++ E+M +L +L R +N + + + YL +
Sbjct: 80 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 136
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPEN--QSHLSTKFAGTLGYTAPEYAIHGQLS 500
IHRD+ N L+ ++ K+ADFGL+RL+ + +H KF + +TAPE + + S
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYNKFS 194
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
K D ++FGVL+ EI + S + L + + L E E P C
Sbjct: 195 IKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRME------RPEGC-- 241
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEV 587
EKV E+ C Q + RP+ +E+
Sbjct: 242 --PEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 25/267 (9%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G +G++Y+G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 80
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C++ P ++ E+M +L +L R +N + + + YL +
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 137
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPEN--QSHLSTKFAGTLGYTAPEYAIHGQLS 500
IHRD+ N L+ ++ K+ADFGL+RL+ + +H KF + +TAPE + + S
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYNKFS 195
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
K D ++FGVL+ EI + S + L + + L E E P C
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRME------RPEGC-- 242
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEV 587
EKV E+ C Q + RP+ +E+
Sbjct: 243 --PEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 25/267 (9%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G +G++Y+G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 75
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C++ P ++ E+M +L +L R +N + + + YL +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 132
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPEN--QSHLSTKFAGTLGYTAPEYAIHGQLS 500
IHRD+ N L+ ++ K+ADFGL+RL+ + +H KF + +TAPE + + S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYNKFS 190
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
K D ++FGVL+ EI + S + L + + L E E P C
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRME------RPEGC-- 237
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEV 587
EKV E+ C Q + RP+ +E+
Sbjct: 238 --PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 25/267 (9%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G +G++Y+G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 19 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 76
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C++ P ++ E+M +L +L R +N + + + YL +
Sbjct: 77 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 133
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPEN--QSHLSTKFAGTLGYTAPEYAIHGQLS 500
IHRD+ N L+ ++ K+ADFGL+RL+ + +H KF + +TAPE + + S
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFS 191
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
K D ++FGVL+ EI + S + L + + L E E P C
Sbjct: 192 IKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRME------RPEGC-- 238
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEV 587
EKV E+ C Q + RP+ +E+
Sbjct: 239 --PEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 25/267 (9%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G +G++Y+G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 75
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C++ P ++ E+M +L +L R +N + + + YL +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 132
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPEN--QSHLSTKFAGTLGYTAPEYAIHGQLS 500
IHRD+ N L+ ++ K+ADFGL+RL+ + +H KF + +TAPE + + S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYNKFS 190
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
K D ++FGVL+ EI + S + L + + L E E P C
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRME------RPEGC-- 237
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEV 587
EKV E+ C Q + RP+ +E+
Sbjct: 238 --PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 142/309 (45%), Gaps = 56/309 (18%)
Query: 309 YRLKDLVSATRKFSEE---------NKLGEGGFGDIYKGTLK-NGK---IVAVKKLAIGI 355
+ +D A R+F++E +G G FG++ G LK GK VA+K L G
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 356 SRRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSL 415
+ + DF +E ++ H N+I L G ++ ++++ EYM N SLD FL + G
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL-RKNDGRF 128
Query: 416 NWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQ 475
Q ++ G G+ YL + + +HRD+ N+L++ +L K++DFG++R+L ++
Sbjct: 129 TVIQLVGMLRGIGSGMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDP 185
Query: 476 SHLSTKFAGTLG--YTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLL 533
T G + +TAPE + + + D +S+G+++ E++S
Sbjct: 186 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS---------------- 229
Query: 534 KRAWRLYENGTHWELMDESL-----------DPNECTKEAAEKVVEIALMCTQSAANSRP 582
Y +W++ ++ + P +C + ++ L C Q + RP
Sbjct: 230 ------YGERPYWDMSNQDVIKAIEEGYRLPPPMDCPI----ALHQLMLDCWQKERSDRP 279
Query: 583 TMSEVVALL 591
++V +L
Sbjct: 280 KFGQIVNML 288
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 25/267 (9%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G +G++Y+G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 77
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C++ P ++ E+M +L +L R +N + + + YL +
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 134
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPEN--QSHLSTKFAGTLGYTAPEYAIHGQLS 500
IHRD+ N L+ ++ K+ADFGL+RL+ + +H KF + +TAPE + + S
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYNKFS 192
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
K D ++FGVL+ EI + S + L + + L E E P C
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRME------RPEGC-- 239
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEV 587
EKV E+ C Q + RP+ +E+
Sbjct: 240 --PEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 110/215 (51%), Gaps = 28/215 (13%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISR---RTLSDFENEVRLISNVHHR 376
+ + E +G GGFG +Y+ G VAVK +T+ + E +L + + H
Sbjct: 8 ELTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHP 66
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGS---LNWKQRFDIILGTARGLAY 433
N+I L G C + P L LV E+ L++ L G++ +NW + ARG+ Y
Sbjct: 67 NIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------ARGMNY 120
Query: 434 LHEDFHVRIIHRDIKPSNVLL-----DDDLQP---KIADFGLARLLPENQSHLSTKF--A 483
LH++ V IIHRD+K SN+L+ + DL KI DFGLAR + H +TK A
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAA 175
Query: 484 GTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
G + APE S+ D +S+GVL+ E+++G
Sbjct: 176 GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 25/267 (9%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G +G++Y+G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 31 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 88
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C++ P ++ E+M +L +L R +N + + + YL +
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 145
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPEN--QSHLSTKFAGTLGYTAPEYAIHGQLS 500
IHRD+ N L+ ++ K+ADFGL+RL+ + +H KF + +TAPE + + S
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYNKFS 203
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
K D ++FGVL+ EI + S + L + + L E E P C
Sbjct: 204 IKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRME------RPEGC-- 250
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEV 587
EKV E+ C Q + RP+ +E+
Sbjct: 251 --PEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 25/267 (9%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G +G++Y+G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 77
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C++ P ++ E+M +L +L R +N + + + YL +
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 134
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPEN--QSHLSTKFAGTLGYTAPEYAIHGQLS 500
IHRD+ N L+ ++ K+ADFGL+RL+ + +H KF + +TAPE + + S
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYNKFS 192
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
K D ++FGVL+ EI + S + L + + L E E P C
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRME------RPEGC-- 239
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEV 587
EKV E+ C Q + RP+ +E+
Sbjct: 240 --PEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 133/285 (46%), Gaps = 47/285 (16%)
Query: 324 ENKLGEGGFGDIYKGTLK-NGK---IVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
E +G G FG++ G LK GK VA+K L G + + DF +E ++ H N+I
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L G ++ ++++ EYM N SLD FL + G Q ++ G G+ YL + +
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFL-RKNDGRFTVIQLVGMLRGIGSGMKYLSDMSY 137
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLG--YTAPEYAIHG 497
V HRD+ N+L++ +L K++DFG++R+L ++ T G + +TAPE +
Sbjct: 138 V---HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 194
Query: 498 QLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESL---- 553
+ + D +S+G+++ E++S Y +W++ ++ +
Sbjct: 195 KFTSASDVWSYGIVMWEVMS----------------------YGERPYWDMSNQDVIKAI 232
Query: 554 -------DPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P +C + ++ L C Q + RP ++V +L
Sbjct: 233 EEGYRLPPPMDCPI----ALHQLMLDCWQKERSDRPKFGQIVNML 273
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 133/285 (46%), Gaps = 47/285 (16%)
Query: 324 ENKLGEGGFGDIYKGTLK-NGK---IVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
E +G G FG++ G LK GK VA+K L G + + DF +E ++ H N+I
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L G ++ ++++ EYM N SLD FL + G Q ++ G G+ YL + +
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFL-RKNDGRFTVIQLVGMLRGIGSGMKYLSDMSY 131
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLG--YTAPEYAIHG 497
V HRD+ N+L++ +L K++DFG++R+L ++ T G + +TAPE +
Sbjct: 132 V---HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 188
Query: 498 QLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESL---- 553
+ + D +S+G+++ E++S Y +W++ ++ +
Sbjct: 189 KFTSASDVWSYGIVMWEVMS----------------------YGERPYWDMSNQDVIKAI 226
Query: 554 -------DPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P +C + ++ L C Q + RP ++V +L
Sbjct: 227 EEGYRLPPPMDCPI----ALHQLMLDCWQKERSDRPKFGQIVNML 267
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 130/269 (48%), Gaps = 29/269 (10%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G FG++Y+G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 16 KHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 73
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C++ P ++ E+M +L +L R ++ + + + YL +
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 130
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPEN--QSHLSTKFAGTLGYTAPEYAIHGQLS 500
IHRD+ N L+ ++ K+ADFGL+RL+ + +H KF + +TAPE + + S
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFS 188
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEY--LLKRAWRLYENGTHWELMDESLDPNEC 558
K D ++FGVL+ EI + S + + LL++ +R+ P C
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMER-------------PEGC 235
Query: 559 TKEAAEKVVEIALMCTQSAANSRPTMSEV 587
EKV E+ C Q + RP+ +E+
Sbjct: 236 ----PEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 135/283 (47%), Gaps = 41/283 (14%)
Query: 324 ENKLGEGGFGDIYKGTLK-NGK---IVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
E +G G FG++ G LK GK VA+K L G + + DF +E ++ H N+I
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L G ++ ++++ E+M N SLD FL + G Q ++ G A G+ YL +
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFL-RQNDGQFTVIQLVGMLRGIAAGMKYLAD--- 127
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLG------YTAPEY 493
+ +HR + N+L++ +L K++DFGL+R L ++ S + LG +TAPE
Sbjct: 128 MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTS--DPTYTSALGGKIPIRWTAPEA 185
Query: 494 AIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELM---- 549
+ + + D +S+G+++ E++S GE R Y + T+ +++
Sbjct: 186 IQYRKFTSASDVWSYGIVMWEVMS-------YGE----------RPYWDMTNQDVINAIE 228
Query: 550 -DESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
D L P + + ++ L C Q N RP ++V L
Sbjct: 229 QDYRLPP---PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 268
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 128/267 (47%), Gaps = 25/267 (9%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G +G++Y+G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 80
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C++ P ++ E+M +L +L R ++ + + + YL +
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 137
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPEN--QSHLSTKFAGTLGYTAPEYAIHGQLS 500
IHRD+ N L+ ++ K+ADFGL+RL+ + +H KF + +TAPE + + S
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYNKFS 195
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
K D ++FGVL+ EI + S + L + + L E E P C
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRME------RPEGC-- 242
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEV 587
EKV E+ C Q + RP+ +E+
Sbjct: 243 --PEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 128/267 (47%), Gaps = 25/267 (9%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G +G++Y+G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 75
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C++ P ++ E+M +L +L R ++ + + + YL +
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 132
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPEN--QSHLSTKFAGTLGYTAPEYAIHGQLS 500
IHRD+ N L+ ++ K+ADFGL+RL+ + +H KF + +TAPE + + S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYNKFS 190
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
K D ++FGVL+ EI + S + L + + L E E P C
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRME------RPEGC-- 237
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEV 587
EKV E+ C Q + RP+ +E+
Sbjct: 238 --PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 128/267 (47%), Gaps = 25/267 (9%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G +G++Y+G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 75
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C++ P ++ E+M +L +L R ++ + + + YL +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 132
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPEN--QSHLSTKFAGTLGYTAPEYAIHGQLS 500
IHRD+ N L+ ++ K+ADFGL+RL+ + +H KF + +TAPE + + S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYNKFS 190
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
K D ++FGVL+ EI + S + L + + L E E P C
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRME------RPEGC-- 237
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEV 587
EKV E+ C Q + RP+ +E+
Sbjct: 238 --PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 128/267 (47%), Gaps = 25/267 (9%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G +G++Y+G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 75
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C++ P ++ E+M +L +L R ++ + + + YL +
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 132
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPEN--QSHLSTKFAGTLGYTAPEYAIHGQLS 500
IHRD+ N L+ ++ K+ADFGL+RL+ + +H KF + +TAPE + + S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYNKFS 190
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
K D ++FGVL+ EI + S + L + + L E E P C
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRME------RPEGC-- 237
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEV 587
EKV E+ C Q + RP+ +E+
Sbjct: 238 --PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 130/269 (48%), Gaps = 29/269 (10%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G +G++Y+G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 16 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 73
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C++ P ++ E+M +L +L R ++ + + + YL +
Sbjct: 74 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 130
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPEN--QSHLSTKFAGTLGYTAPEYAIHGQLS 500
IHRD+ N L+ ++ K+ADFGL+RL+ + +H KF + +TAPE + + S
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFS 188
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEY--LLKRAWRLYENGTHWELMDESLDPNEC 558
K D ++FGVL+ EI + S + + LL++ +R+ P C
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMER-------------PEGC 235
Query: 559 TKEAAEKVVEIALMCTQSAANSRPTMSEV 587
EKV E+ C Q + RP+ +E+
Sbjct: 236 ----PEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 127/270 (47%), Gaps = 35/270 (12%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLG 383
E KLG G FG+++ T VAVK + G ++ F E ++ + H L++L
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--SMSVEAFLAEANVMKTLQHDKLVKLHA 244
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
++ P + ++ E+MA SL FL ++ + D A G+A++ + + I
Sbjct: 245 VVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY---I 300
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKV 503
HRD++ +N+L+ L KIADFGLAR + KF + +TAPE G + K
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLAR--------VGAKFP--IKWTAPEAINFGSFTIKS 350
Query: 504 DAYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECTKE 561
D +SFG+L++EI++ + E + L+R +R+ P C
Sbjct: 351 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR-------------PENC--- 394
Query: 562 AAEKVVEIALMCTQSAANSRPTMSEVVALL 591
E++ I + C ++ RPT + ++L
Sbjct: 395 -PEELYNIMMRCWKNRPEERPTFEYIQSVL 423
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 128/267 (47%), Gaps = 25/267 (9%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G +G++Y+G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 75
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C++ P ++ E+M +L +L R ++ + + + YL +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 132
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPEN--QSHLSTKFAGTLGYTAPEYAIHGQLS 500
IHRD+ N L+ ++ K+ADFGL+RL+ + +H KF + +TAPE + + S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYNKFS 190
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
K D ++FGVL+ EI + S + L + + L E E P C
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRME------RPEGC-- 237
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEV 587
EKV E+ C Q + RP+ +E+
Sbjct: 238 --PEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 124/265 (46%), Gaps = 21/265 (7%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G +G++Y+G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 19 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 76
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C++ P ++ E+M +L +L R +N + + + YL +
Sbjct: 77 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 133
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEK 502
IHRD+ N L+ ++ K+ADFGL+RL+ + + +TAPE + + S K
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIK 193
Query: 503 VDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTKEA 562
D ++FGVL+ EI + S + L + + L E E P C
Sbjct: 194 SDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRME------RPEGC---- 238
Query: 563 AEKVVEIALMCTQSAANSRPTMSEV 587
EKV E+ C Q + RP+ +E+
Sbjct: 239 PEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 124/265 (46%), Gaps = 21/265 (7%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G +G++Y+G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 77
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C++ P ++ E+M +L +L R +N + + + YL +
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 134
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEK 502
IHRD+ N L+ ++ K+ADFGL+RL+ + + +TAPE + + S K
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIK 194
Query: 503 VDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTKEA 562
D ++FGVL+ EI + S + L + + L E E P C
Sbjct: 195 SDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRME------RPEGC---- 239
Query: 563 AEKVVEIALMCTQSAANSRPTMSEV 587
EKV E+ C Q + RP+ +E+
Sbjct: 240 PEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 128/267 (47%), Gaps = 25/267 (9%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G +G++Y+G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 264 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 321
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C++ P ++ E+M +L +L R +N + + + YL +
Sbjct: 322 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 378
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPEN--QSHLSTKFAGTLGYTAPEYAIHGQLS 500
IHR++ N L+ ++ K+ADFGL+RL+ + +H KF + +TAPE + + S
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYNKFS 436
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
K D ++FGVL+ EI + S + L + + L E E P C
Sbjct: 437 IKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRME------RPEGC-- 483
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEV 587
EKV E+ C Q + RP+ +E+
Sbjct: 484 --PEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 130/269 (48%), Gaps = 29/269 (10%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G +G++Y+G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 16 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 73
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C++ P ++ E+M +L +L R ++ + + + YL +
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 130
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPEN--QSHLSTKFAGTLGYTAPEYAIHGQLS 500
IHRD+ N L+ ++ K+ADFGL+RL+ + +H KF + +TAPE + + S
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFP--IKWTAPESLAYNKFS 188
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEY--LLKRAWRLYENGTHWELMDESLDPNEC 558
K D ++FGVL+ EI + S + + LL++ +R+ P C
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMER-------------PEGC 235
Query: 559 TKEAAEKVVEIALMCTQSAANSRPTMSEV 587
EKV E+ C Q + RP+ +E+
Sbjct: 236 ----PEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 128/267 (47%), Gaps = 25/267 (9%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G +G++Y+G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 222 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 279
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C++ P ++ E+M +L +L R +N + + + YL +
Sbjct: 280 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NF 336
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPEN--QSHLSTKFAGTLGYTAPEYAIHGQLS 500
IHR++ N L+ ++ K+ADFGL+RL+ + +H KF + +TAPE + + S
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYNKFS 394
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
K D ++FGVL+ EI + S + L + + L E E P C
Sbjct: 395 IKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRME------RPEGC-- 441
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEV 587
EKV E+ C Q + RP+ +E+
Sbjct: 442 --PEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 126/264 (47%), Gaps = 31/264 (11%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
+LG G FG + G + VA+K + G + +F E +++ N+ H L++L G
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMIKEG--SMSEDEFIEEAKVMMNLSHEKLVQLYGV 71
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
C++ + ++ EYMAN L +L E R +Q ++ + YL + +H
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 127
Query: 445 RDIKPSNVLLDDDLQPKIADFGLARLLPENQ--SHLSTKFAGTLGYTAPEYAIHGQLSEK 502
RD+ N L++D K++DFGL+R + +++ S + +KF + ++ PE ++ + S K
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP--VRWSPPEVLMYSKFSSK 185
Query: 503 VDAYSFGVLVLEIIS-GTKSSE--TKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECT 559
D ++FGVL+ EI S G E T E E+ + + RLY
Sbjct: 186 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRLYRPHL--------------- 229
Query: 560 KEAAEKVVEIALMCTQSAANSRPT 583
A+EKV I C A+ RPT
Sbjct: 230 --ASEKVYTIMYSCWHEKADERPT 251
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 134/283 (47%), Gaps = 32/283 (11%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
+LG G FG + G + VA+K + G + +F E +++ N+ H L++L G
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEG--SMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
C++ + ++ EYMAN L +L E R +Q ++ + YL + +H
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 128
Query: 445 RDIKPSNVLLDDDLQPKIADFGLARLLPENQ--SHLSTKFAGTLGYTAPEYAIHGQLSEK 502
RD+ N L++D K++DFGL+R + +++ S + +KF + ++ PE ++ + S K
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP--VRWSPPEVLMYSKFSSK 186
Query: 503 VDAYSFGVLVLEIIS-GTKSSE--TKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECT 559
D ++FGVL+ EI S G E T E E+ + + RLY
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRLYRPHL--------------- 230
Query: 560 KEAAEKVVEIALMCTQSAANSRPTMSEVVA-LLKSTSSSLLGN 601
A+EKV I C A+ RPT +++ +L +L G
Sbjct: 231 --ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDENLYGQ 271
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 122/262 (46%), Gaps = 27/262 (10%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
+LG G FG + G + VA+K + G + +F E +++ N+ H L++L G
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEG--SMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
C++ + ++ EYMAN L +L E R +Q ++ + YL + +H
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 143
Query: 445 RDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVD 504
RD+ N L++D K++DFGL+R + +++ S + ++ PE ++ + S K D
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSD 203
Query: 505 AYSFGVLVLEIIS-GTKSSE--TKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTKE 561
++FGVL+ EI S G E T E E+ + + RLY
Sbjct: 204 IWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRLYRPHL----------------- 245
Query: 562 AAEKVVEIALMCTQSAANSRPT 583
A+EKV I C A+ RPT
Sbjct: 246 ASEKVYTIMYSCWHEKADERPT 267
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 126/264 (47%), Gaps = 31/264 (11%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
+LG G FG + G + VA+K + G + +F E +++ N+ H L++L G
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEG--SMSEDEFIEEAKVMMNLSHEKLVQLYGV 67
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
C++ + ++ EYMAN L +L E R +Q ++ + YL + +H
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 123
Query: 445 RDIKPSNVLLDDDLQPKIADFGLARLLPENQ--SHLSTKFAGTLGYTAPEYAIHGQLSEK 502
RD+ N L++D K++DFGL+R + +++ S + +KF + ++ PE ++ + S K
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP--VRWSPPEVLMYSKFSSK 181
Query: 503 VDAYSFGVLVLEIIS-GTKSSE--TKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECT 559
D ++FGVL+ EI S G E T E E+ + + RLY
Sbjct: 182 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRLYRPHL--------------- 225
Query: 560 KEAAEKVVEIALMCTQSAANSRPT 583
A+EKV I C A+ RPT
Sbjct: 226 --ASEKVYTIMYSCWHEKADERPT 247
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 126/264 (47%), Gaps = 31/264 (11%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
+LG G FG + G + VA+K + G + +F E +++ N+ H L++L G
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEG--SMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
C++ + ++ EYMAN L +L E R +Q ++ + YL + +H
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 143
Query: 445 RDIKPSNVLLDDDLQPKIADFGLARLLPENQ--SHLSTKFAGTLGYTAPEYAIHGQLSEK 502
RD+ N L++D K++DFGL+R + +++ S + +KF + ++ PE ++ + S K
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP--VRWSPPEVLMYSKFSSK 201
Query: 503 VDAYSFGVLVLEIIS-GTKSSE--TKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECT 559
D ++FGVL+ EI S G E T E E+ + + RLY
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRLYRPHL--------------- 245
Query: 560 KEAAEKVVEIALMCTQSAANSRPT 583
A+EKV I C A+ RPT
Sbjct: 246 --ASEKVYTIMYSCWHEKADERPT 267
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 136/304 (44%), Gaps = 43/304 (14%)
Query: 326 KLGEGGFGDIYKGTLKN---GKI---VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
+LG+G FG +Y+G ++ G+ VAVK + S R +F NE ++ +++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEK--------RGSLNWKQRFDIILGTARGL 431
RLLG S+G ++V E MA+ L +L + R ++ + A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSHLSTKFAGTLGYTA 490
AYL+ + +HRD+ N ++ D KI DFG+ R + E + K + + A
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMD 550
PE G + D +SFGV++ EI S +G E +LK +G + +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS-LAEQPYQGLSNEQVLK----FVMDGGYLD--- 252
Query: 551 ESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLGNKPLLKPTFV 610
P+ C E+V ++ MC Q N RPT E+V LLK L P+F
Sbjct: 253 ---QPDNC----PERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD----------LHPSFP 295
Query: 611 ETDY 614
E +
Sbjct: 296 EVSF 299
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 126/264 (47%), Gaps = 31/264 (11%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
+LG G FG + G + VA+K + G + +F E +++ N+ H L++L G
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIKMIKEG--SMSEDEFIEEAKVMMNLSHEKLVQLYGV 78
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
C++ + ++ EYMAN L +L E R +Q ++ + YL + +H
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 134
Query: 445 RDIKPSNVLLDDDLQPKIADFGLARLLPENQ--SHLSTKFAGTLGYTAPEYAIHGQLSEK 502
RD+ N L++D K++DFGL+R + +++ S + +KF + ++ PE ++ + S K
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP--VRWSPPEVLMYSKFSSK 192
Query: 503 VDAYSFGVLVLEIIS-GTKSSE--TKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECT 559
D ++FGVL+ EI S G E T E E+ + + RLY
Sbjct: 193 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRLYRPHL--------------- 236
Query: 560 KEAAEKVVEIALMCTQSAANSRPT 583
A+EKV I C A+ RPT
Sbjct: 237 --ASEKVYTIMYSCWHEKADERPT 258
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 125/277 (45%), Gaps = 25/277 (9%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
++G G FG ++ G N VA+K + G DF E ++ + H L++L G
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
C + + LV+E+M + L +L +RG + + L G+AYL E +IH
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEE---ASVIH 126
Query: 445 RDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVD 504
RD+ N L+ ++ K++DFG+ R + ++Q ST + + +PE + S K D
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 505 AYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECTKEA 562
+SFGVL+ E+ S K E + + +RLY+ + A
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK-----------------PRLA 229
Query: 563 AEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLL 599
+ V +I C + RP S ++ L + ++S L
Sbjct: 230 STHVYQIMNHCWKERPEDRPAFSRLLRQLAAIAASGL 266
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 108/200 (54%), Gaps = 14/200 (7%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAI-GISRRTLSDFENEVRLISNVHHRNLIRLLG 383
++G G FG +YKG VAVK L + + + L F+NEV ++ H N++ +G
Sbjct: 18 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
++ P+L +V ++ SSL L + K+ DI TARG+ YLH II
Sbjct: 76 YSTK-PQLAIVTQWCEGSSLYHHLHASET-KFEMKKLIDIARQTARGMDYLHAK---SII 130
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSHLSTKFAGTLGYTAPEYAIHGQ---- 498
HRD+K +N+ L +D KI DFGLA + + SH + +G++ + APE I Q
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDSNP 189
Query: 499 LSEKVDAYSFGVLVLEIISG 518
S + D Y+FG+++ E+++G
Sbjct: 190 YSFQSDVYAFGIVLYELMTG 209
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 132/300 (44%), Gaps = 40/300 (13%)
Query: 319 RKFSEENKLGEGGFGDIYKG------TLKNGKIVAVKKLAIGISRRTLSDFENEVRLISN 372
R + +LGEG FG ++ K+ +VAVK L + DF+ E L++N
Sbjct: 15 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALK-DPTLAARKDFQREAELLTN 73
Query: 373 VHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFG--------------EKRGSLNWK 418
+ H ++++ G C G LI+V+EYM + L+KFL + +G L
Sbjct: 74 LQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLS 133
Query: 419 QRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLAR-LLPENQSH 477
Q I A G+ YL +HRD+ N L+ +L KI DFG++R + +
Sbjct: 134 QMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYR 190
Query: 478 LSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAW 537
+ + + PE ++ + + + D +SFGV++ EI T G++ + L
Sbjct: 191 VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIF-------TYGKQPWFQLSNT- 242
Query: 538 RLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
+ E T +++ P C KE V ++ L C Q R + E+ +L + +
Sbjct: 243 EVIECITQGRVLER---PRVCPKE----VYDVMLGCWQREPQQRLNIKEIYKILHALGKA 295
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 128/267 (47%), Gaps = 25/267 (9%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G +G++Y+G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL 282
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C++ P ++ E+M +L +L R ++ + + + YL +
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 339
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPEN--QSHLSTKFAGTLGYTAPEYAIHGQLS 500
IHR++ N L+ ++ K+ADFGL+RL+ + +H KF + +TAPE + + S
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYNKFS 397
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
K D ++FGVL+ EI + S + L + + L E E P C
Sbjct: 398 IKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKDYRME------RPEGC-- 444
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEV 587
EKV E+ C Q + RP+ +E+
Sbjct: 445 --PEKVYELMRACWQWNPSDRPSFAEI 469
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 122/262 (46%), Gaps = 27/262 (10%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
+LG G FG + G + VA+K + G + +F E +++ N+ H L++L G
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEG--SMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
C++ + ++ EYMAN L +L E R +Q ++ + YL + +H
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 128
Query: 445 RDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVD 504
RD+ N L++D K++DFGL+R + +++ S + ++ PE ++ + S K D
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSD 188
Query: 505 AYSFGVLVLEIIS-GTKSSE--TKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTKE 561
++FGVL+ EI S G E T E E+ + + RLY
Sbjct: 189 IWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRLYRPHL----------------- 230
Query: 562 AAEKVVEIALMCTQSAANSRPT 583
A+EKV I C A+ RPT
Sbjct: 231 ASEKVYTIMYSCWHEKADERPT 252
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 125/269 (46%), Gaps = 29/269 (10%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
+LG G FG + G K VAVK + G + +F E + + + H L++ G
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEG--SMSEDEFFQEAQTMMKLSHPKLVKFYGV 71
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
CS+ + +V EY++N L +L +G L Q ++ G+A+L + IH
Sbjct: 72 CSKEYPIYIVTEYISNGCLLNYLRSHGKG-LEPSQLLEMCYDVCEGMAFLESH---QFIH 127
Query: 445 RDIKPSNVLLDDDLQPKIADFGLARLLPENQ--SHLSTKFAGTLGYTAPEYAIHGQLSEK 502
RD+ N L+D DL K++DFG+ R + ++Q S + TKF + ++APE + + S K
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFP--VKWSAPEVFHYFKYSSK 185
Query: 503 VDAYSFGVLVLEIISGTKSSETKGEEGEYLLK--RAWRLYENGTHWELMDESLDPNECTK 560
D ++FG+L+ E+ S K E +LK + RLY
Sbjct: 186 SDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHL---------------- 229
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEVVA 589
A++ + +I C RPT ++++
Sbjct: 230 -ASDTIYQIMYSCWHELPEKRPTFQQLLS 257
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 133/292 (45%), Gaps = 27/292 (9%)
Query: 319 RKFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
++ E +G G FG + K + K VA+K++ R+ F E+R +S V+H N+
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESERKA---FIVELRQLSRVNHPNI 64
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFG-EKRGSLNWKQRFDIILGTARGLAYLHED 437
++L G C + LV EY SL L G E L ++G+AYLH
Sbjct: 65 VKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 122
Query: 438 FHVRIIHRDIKPSNVLL-DDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIH 496
+IHRD+KP N+LL KI DFG A + Q+H+ T G+ + APE
Sbjct: 123 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHM-TNNKGSAAWMAPEVFEG 178
Query: 497 GQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPN 556
SEK D +S+G+++ E+I+ K + E G + W ++ NGT L+ P
Sbjct: 179 SNYSEKCDVFSWGIILWEVITRRKPFD---EIGGPAFRIMWAVH-NGTRPPLIKNLPKPI 234
Query: 557 ECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG-NKPLLKP 607
E + C + RP+M E+V ++ G ++PL P
Sbjct: 235 E----------SLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYP 276
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 123/266 (46%), Gaps = 25/266 (9%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
++KLG G +G++Y G K + VAVK L + +F E ++ + H NL++LL
Sbjct: 37 KHKLGGGQYGEVYVGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVMKEIKHPNLVQLL 94
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C+ P +V EYM +L +L R + + + + YL +
Sbjct: 95 GVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKK---NF 151
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPEN--QSHLSTKFAGTLGYTAPEYAIHGQLS 500
IHRD+ N L+ ++ K+ADFGL+RL+ + +H KF + +TAPE + S
Sbjct: 152 IHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFP--IKWTAPESLAYNTFS 209
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
K D ++FGVL+ EI + S + L + + L E G E P C
Sbjct: 210 IKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYDLLEKGYRME------QPEGCPP 258
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSE 586
KV E+ C + + RP+ +E
Sbjct: 259 ----KVYELMRACWKWSPADRPSFAE 280
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAI-GISRRTLSDFENEVRLISNVHHRNLIRLLG 383
++G G FG +YKG VAVK L + + + L F+NEV ++ H N++ +G
Sbjct: 30 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
S P+L +V ++ SSL L + K+ DI TARG+ YLH II
Sbjct: 88 Y-STAPQLAIVTQWCEGSSLYHHLHASET-KFEMKKLIDIARQTARGMDYLHAK---SII 142
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSHLSTKFAGTLGYTAPEYAIHGQ---- 498
HRD+K +N+ L +D KI DFGLA + SH + +G++ + APE I Q
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE-VIRMQDSNP 201
Query: 499 LSEKVDAYSFGVLVLEIISG 518
S + D Y+FG+++ E+++G
Sbjct: 202 YSFQSDVYAFGIVLYELMTG 221
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 133/292 (45%), Gaps = 27/292 (9%)
Query: 319 RKFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
++ E +G G FG + K + K VA+K++ R+ F E+R +S V+H N+
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESERKA---FIVELRQLSRVNHPNI 63
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFG-EKRGSLNWKQRFDIILGTARGLAYLHED 437
++L G C + LV EY SL L G E L ++G+AYLH
Sbjct: 64 VKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 121
Query: 438 FHVRIIHRDIKPSNVLL-DDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIH 496
+IHRD+KP N+LL KI DFG A + Q+H+ T G+ + APE
Sbjct: 122 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHM-TNNKGSAAWMAPEVFEG 177
Query: 497 GQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPN 556
SEK D +S+G+++ E+I+ K + E G + W ++ NGT L+ P
Sbjct: 178 SNYSEKCDVFSWGIILWEVITRRKPFD---EIGGPAFRIMWAVH-NGTRPPLIKNLPKPI 233
Query: 557 ECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG-NKPLLKP 607
E + C + RP+M E+V ++ G ++PL P
Sbjct: 234 E----------SLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYP 275
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 117/246 (47%), Gaps = 18/246 (7%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
++G G FG ++ G N VA+K + G DF E ++ + H L++L G
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
C + + LV+E+M + L +L +RG + + L G+AYL E +IH
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIH 126
Query: 445 RDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVD 504
RD+ N L+ ++ K++DFG+ R + ++Q ST + + +PE + S K D
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 505 AYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYE---NGTH-WELMDESLDPNEC 558
+SFGVL+ E+ S K E + + +RLY+ TH +++M N C
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIM------NHC 240
Query: 559 TKEAAE 564
KE E
Sbjct: 241 WKERPE 246
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 117/246 (47%), Gaps = 18/246 (7%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
++G G FG ++ G N VA+K + G DF E ++ + H L++L G
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGV 68
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
C + + LV+E+M + L +L +RG + + L G+AYL E +IH
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIH 124
Query: 445 RDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVD 504
RD+ N L+ ++ K++DFG+ R + ++Q ST + + +PE + S K D
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 184
Query: 505 AYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYE---NGTH-WELMDESLDPNEC 558
+SFGVL+ E+ S K E + + +RLY+ TH +++M N C
Sbjct: 185 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIM------NHC 238
Query: 559 TKEAAE 564
KE E
Sbjct: 239 WKERPE 244
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 123/277 (44%), Gaps = 25/277 (9%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
++G G FG ++ G N VA+K + G DF E ++ + H L++L G
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGV 73
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
C + + LV+E+M + L +L +RG + + L G+AYL E +IH
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIH 129
Query: 445 RDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVD 504
RD+ N L+ ++ K++DFG+ R + ++Q ST + + +PE + S K D
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 189
Query: 505 AYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECTKEA 562
+SFGVL+ E+ S K E + + +RLY+ + A
Sbjct: 190 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK-----------------PRLA 232
Query: 563 AEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLL 599
+ V +I C + RP S ++ L + S L
Sbjct: 233 STHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESGL 269
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 107/200 (53%), Gaps = 14/200 (7%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAI-GISRRTLSDFENEVRLISNVHHRNLIRLLG 383
++G G FG +YKG VAVK L + + + L F+NEV ++ H N++ +G
Sbjct: 30 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
++ P+L +V ++ SSL L + K+ DI TARG+ YLH II
Sbjct: 88 YSTK-PQLAIVTQWCEGSSLYHHLHASET-KFEMKKLIDIARQTARGMDYLHAK---SII 142
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSHLSTKFAGTLGYTAPEYAIHGQ---- 498
HRD+K +N+ L +D KI DFGLA + SH + +G++ + APE I Q
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE-VIRMQDSNP 201
Query: 499 LSEKVDAYSFGVLVLEIISG 518
S + D Y+FG+++ E+++G
Sbjct: 202 YSFQSDVYAFGIVLYELMTG 221
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 118/246 (47%), Gaps = 18/246 (7%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
++G G FG ++ G N VA+K + G + DF E ++ + H L++L G
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIKEG--SMSEDDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
C + + LV+E+M + L +L +RG + + L G+AYL E +IH
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIH 146
Query: 445 RDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVD 504
RD+ N L+ ++ K++DFG+ R + ++Q ST + + +PE + S K D
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 206
Query: 505 AYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYE---NGTH-WELMDESLDPNEC 558
+SFGVL+ E+ S K E + + +RLY+ TH +++M N C
Sbjct: 207 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIM------NHC 260
Query: 559 TKEAAE 564
KE E
Sbjct: 261 WKERPE 266
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 135/304 (44%), Gaps = 43/304 (14%)
Query: 326 KLGEGGFGDIYKGTLKN---GKI---VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
+LG+G FG +Y+G ++ G+ VAVK + S R +F NE ++ +++
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEK--------RGSLNWKQRFDIILGTARGL 431
RLLG S+G ++V E MA+ L +L + R ++ + A G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSHLSTKFAGTLGYTA 490
AYL+ + +HRD+ N ++ D KI DFG+ R + E + K + + A
Sbjct: 141 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMD 550
PE G + D +SFGV++ EI S +G E +LK +G + +
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEITS-LAEQPYQGLSNEQVLK----FVMDGGYLD--- 249
Query: 551 ESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLGNKPLLKPTFV 610
P+ C E+V ++ MC Q RPT E+V LLK L P+F
Sbjct: 250 ---QPDNC----PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD----------LHPSFP 292
Query: 611 ETDY 614
E +
Sbjct: 293 EVSF 296
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 135/304 (44%), Gaps = 43/304 (14%)
Query: 326 KLGEGGFGDIYKGTLKN---GKI---VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
+LG+G FG +Y+G ++ G+ VAVK + S R +F NE ++ +++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEK--------RGSLNWKQRFDIILGTARGL 431
RLLG S+G ++V E MA+ L +L + R ++ + A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSHLSTKFAGTLGYTA 490
AYL+ + +HRD+ N ++ D KI DFG+ R + E + K + + A
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMD 550
PE G + D +SFGV++ EI S +G E +LK +G + +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS-LAEQPYQGLSNEQVLK----FVMDGGYLD--- 252
Query: 551 ESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLGNKPLLKPTFV 610
P+ C E+V ++ MC Q RPT E+V LLK L P+F
Sbjct: 253 ---QPDNC----PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD----------LHPSFP 295
Query: 611 ETDY 614
E +
Sbjct: 296 EVSF 299
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 136/304 (44%), Gaps = 43/304 (14%)
Query: 326 KLGEGGFGDIYKGTLKN---GKI---VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
+LG+G FG +Y+G ++ G+ VAVK + S R +F NE ++ +++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEK--------RGSLNWKQRFDIILGTARGL 431
RLLG S+G ++V E MA+ L +L + R ++ + A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLS-TKFAGTLGYTA 490
AYL+ + +HR++ N ++ D KI DFG+ R + E + K + + A
Sbjct: 144 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMD 550
PE G + D +SFGV++ EI S +G E +LK +G + +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS-LAEQPYQGLSNEQVLK----FVMDGGYLD--- 252
Query: 551 ESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLGNKPLLKPTFV 610
P+ C E+V ++ MC Q N RPT E+V LLK L P+F
Sbjct: 253 ---QPDNC----PERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD----------LHPSFP 295
Query: 611 ETDY 614
E +
Sbjct: 296 EVSF 299
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 114/216 (52%), Gaps = 22/216 (10%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISR------RTLSDFENEVRL 369
A + E ++G+GGFG ++KG L K+ +VA+K L +G S +F+ EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
+SN++H N+++L G P +++ E++ L L +K + W + ++L A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLL-DKAHPIKWSVKLRLMLDIAL 133
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLD--DDLQP---KIADFGLARLLPENQSHLSTKFAG 484
G+ Y+ ++ + I+HRD++ N+ L D+ P K+ADFGL+ + H + G
Sbjct: 134 GIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS----QQSVHSVSGLLG 188
Query: 485 TLGYTAPEY--AIHGQLSEKVDAYSFGVLVLEIISG 518
+ APE A +EK D YSF +++ I++G
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 136/304 (44%), Gaps = 43/304 (14%)
Query: 326 KLGEGGFGDIYKGTLKN---GKI---VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
+LG+G FG +Y+G ++ G+ VAVK + S R +F NE ++ +++
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEK--------RGSLNWKQRFDIILGTARGL 431
RLLG S+G ++V E MA+ L +L + R ++ + A G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLS-TKFAGTLGYTA 490
AYL+ + +HR++ N ++ D KI DFG+ R + E + K + + A
Sbjct: 145 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 201
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMD 550
PE G + D +SFGV++ EI S +G E +LK +G + +
Sbjct: 202 PESLKDGVFTTSSDMWSFGVVLWEITS-LAEQPYQGLSNEQVLK----FVMDGGYLD--- 253
Query: 551 ESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLGNKPLLKPTFV 610
P+ C E+V ++ MC Q N RPT E+V LLK L P+F
Sbjct: 254 ---QPDNC----PERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD----------LHPSFP 296
Query: 611 ETDY 614
E +
Sbjct: 297 EVSF 300
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 10/198 (5%)
Query: 325 NKLGEGGFGDIY--KGTLKNGKIVAVKKLAIGISRR--TLSDFENEVRLISNVHHRNLIR 380
+KLG GG +Y + T+ N K VA+K + I + TL FE EV S + H+N++
Sbjct: 17 DKLGGGGMSTVYLAEDTILNIK-VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 381 LLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
++ + LV EY+ +L +++ E G L+ + G+ + H+ +
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQILDGIKHAHD---M 130
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLS 500
RI+HRDIKP N+L+D + KI DFG+A+ L E + GT+ Y +PE A
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATD 190
Query: 501 EKVDAYSFGVLVLEIISG 518
E D YS G+++ E++ G
Sbjct: 191 ECTDIYSIGIVLYEMLVG 208
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 136/304 (44%), Gaps = 43/304 (14%)
Query: 326 KLGEGGFGDIYKGTLKN---GKI---VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
+LG+G FG +Y+G ++ G+ VAVK + S R +F NE ++ +++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEK--------RGSLNWKQRFDIILGTARGL 431
RLLG S+G ++V E MA+ L +L + R ++ + A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLS-TKFAGTLGYTA 490
AYL+ + +HRD+ N ++ D KI DFG+ R + E + K + + A
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMD 550
PE G + D +SFGV++ EI S + +G E +LK +G + +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQP-YQGLSNEQVLK----FVMDGGYLD--- 252
Query: 551 ESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLGNKPLLKPTFV 610
P+ C E+V ++ MC Q RPT E+V LLK L P+F
Sbjct: 253 ---QPDNC----PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD----------LHPSFP 295
Query: 611 ETDY 614
E +
Sbjct: 296 EVSF 299
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 135/304 (44%), Gaps = 43/304 (14%)
Query: 326 KLGEGGFGDIYKGTLKN---GKI---VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
+LG+G FG +Y+G ++ G+ VAVK + S R +F NE ++ +++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEK--------RGSLNWKQRFDIILGTARGL 431
RLLG S+G ++V E MA+ L +L + R ++ + A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLS-TKFAGTLGYTA 490
AYL+ + +HRD+ N ++ D KI DFG+ R + E + K + + A
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMA 200
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMD 550
PE G + D +SFGV++ EI S +G E +LK +G + +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS-LAEQPYQGLSNEQVLK----FVMDGGYLD--- 252
Query: 551 ESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLGNKPLLKPTFV 610
P+ C E+V ++ MC Q RPT E+V LLK L P+F
Sbjct: 253 ---QPDNC----PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD----------LHPSFP 295
Query: 611 ETDY 614
E +
Sbjct: 296 EVSF 299
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 135/304 (44%), Gaps = 43/304 (14%)
Query: 326 KLGEGGFGDIYKGTLKN---GKI---VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
+LG+G FG +Y+G ++ G+ VAVK + S R +F NE ++ +++
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEK--------RGSLNWKQRFDIILGTARGL 431
RLLG S+G ++V E MA+ L +L + R ++ + A G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLS-TKFAGTLGYTA 490
AYL+ + +HRD+ N ++ D KI DFG+ R + E + K + + A
Sbjct: 143 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMD 550
PE G + D +SFGV++ EI S +G E +LK +G + +
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEITS-LAEQPYQGLSNEQVLK----FVMDGGYLD--- 251
Query: 551 ESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLGNKPLLKPTFV 610
P+ C E+V ++ MC Q RPT E+V LLK L P+F
Sbjct: 252 ---QPDNC----PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD----------LHPSFP 294
Query: 611 ETDY 614
E +
Sbjct: 295 EVSF 298
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 25/280 (8%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAI-GISRRTLSDFENEVRLISNVHHRNLIRLLG 383
++G G FG +YKG VAVK L + + + L F+NEV ++ H N++ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
S P+L +V ++ SSL L + + DI TA+G+ YLH II
Sbjct: 72 Y-STAPQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAK---SII 126
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSHLSTKFAGTLGYTAPEYAIHGQ---- 498
HRD+K +N+ L +DL KI DFGLA + + SH + +G++ + APE I Q
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDKNP 185
Query: 499 LSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNEC 558
S + D Y+FG+++ E+++G + ++ G + D S + C
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-------IFMVGRGYLSPDLSKVRSNC 238
Query: 559 TKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSL 598
K + E C + + RP +++A ++ + SL
Sbjct: 239 PKAMKRLMAE----CLKKKRDERPLFPQILASIELLARSL 274
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 122/277 (44%), Gaps = 25/277 (9%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
++G G FG ++ G N VA+K + G DF E ++ + H L++L G
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--EDFIEEAEVMMKLSHPKLVQLYGV 71
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
C + + LV E+M + L +L +RG + + L G+AYL E +IH
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIH 127
Query: 445 RDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVD 504
RD+ N L+ ++ K++DFG+ R + ++Q ST + + +PE + S K D
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 187
Query: 505 AYSFGVLVLEIISGTKSSETKGEEGEYL--LKRAWRLYENGTHWELMDESLDPNECTKEA 562
+SFGVL+ E+ S K E + + +RLY+ + A
Sbjct: 188 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK-----------------PRLA 230
Query: 563 AEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLL 599
+ V +I C + RP S ++ L + S L
Sbjct: 231 STHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESGL 267
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 114/212 (53%), Gaps = 15/212 (7%)
Query: 315 VSATRKFSEENKLGEGGFGDIYKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
+S++ +F + KLG G + +YKG K G VA+K++ + T S E+ L+ +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGS------LNWKQRFDIILGT 427
H N++RL +L LV+E+M N L K++ G+ LN + F L
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDND-LKKYMDSRTVGNTPRGLELNLVKYFQWQL-- 117
Query: 428 ARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLG 487
+GLA+ HE+ +I+HRD+KP N+L++ Q K+ DFGLAR + S++ TL
Sbjct: 118 LQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLW 173
Query: 488 YTAPEYAIHGQ-LSEKVDAYSFGVLVLEIISG 518
Y AP+ + + S +D +S G ++ E+I+G
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITG 205
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 129/297 (43%), Gaps = 47/297 (15%)
Query: 324 ENKLGEGGFGDIYKGTLKN-----GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
+ +LGEG FG ++ N KI+ K S DF E L++N+ H ++
Sbjct: 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLF-----------GEKRGSLNWKQRFDIILGT 427
++ G C +G LI+V+EYM + L+KFL G L Q I
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 428 ARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLG 487
A G+ YL +HRD+ N L+ ++L KI DFG++R + ST + G
Sbjct: 138 AAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDV------YSTDYYRVGG 188
Query: 488 YT-------APEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLY 540
+T PE ++ + + + D +S GV++ EI T G++ Y L +
Sbjct: 189 HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIF-------TYGKQPWYQLSNN-EVI 240
Query: 541 ENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
E T ++ P C +E V E+ L C Q + R + + LL++ + +
Sbjct: 241 ECITQGRVLQR---PRTCPQE----VYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 134/280 (47%), Gaps = 25/280 (8%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAI-GISRRTLSDFENEVRLISNVHHRNLIRLLG 383
++G G FG +YKG VAVK L + + + L F+NEV ++ H N++ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
++ P+L +V ++ SSL L + + DI TA+G+ YLH II
Sbjct: 72 YSTK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAK---SII 126
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSHLSTKFAGTLGYTAPEYAIHGQ---- 498
HRD+K +N+ L +DL KI DFGLA + + SH + +G++ + APE I Q
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDKNP 185
Query: 499 LSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNEC 558
S + D Y+FG+++ E+++G + ++ G + D S + C
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-------IFMVGRGYLSPDLSKVRSNC 238
Query: 559 TKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSL 598
K + E C + + RP +++A ++ + SL
Sbjct: 239 PKAMKRLMAE----CLKKKRDERPLFPQILASIELLARSL 274
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 134/280 (47%), Gaps = 25/280 (8%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAI-GISRRTLSDFENEVRLISNVHHRNLIRLLG 383
++G G FG +YKG VAVK L + + + L F+NEV ++ H N++ +G
Sbjct: 16 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
++ P+L +V ++ SSL L + + DI TA+G+ YLH II
Sbjct: 74 YSTK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAK---SII 128
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSHLSTKFAGTLGYTAPEYAIHGQ---- 498
HRD+K +N+ L +DL KI DFGLA + + SH + +G++ + APE I Q
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDKNP 187
Query: 499 LSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNEC 558
S + D Y+FG+++ E+++G + ++ G + D S + C
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-------IFMVGRGYLSPDLSKVRSNC 240
Query: 559 TKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSL 598
K + E C + + RP +++A ++ + SL
Sbjct: 241 PKAMKRLMAE----CLKKKRDERPLFPQILASIELLARSL 276
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 134/280 (47%), Gaps = 25/280 (8%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAI-GISRRTLSDFENEVRLISNVHHRNLIRLLG 383
++G G FG +YKG VAVK L + + + L F+NEV ++ H N++ +G
Sbjct: 19 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
++ P+L +V ++ SSL L + + DI TA+G+ YLH II
Sbjct: 77 YSTK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAK---SII 131
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSHLSTKFAGTLGYTAPEYAIHGQ---- 498
HRD+K +N+ L +DL KI DFGLA + + SH + +G++ + APE I Q
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDKNP 190
Query: 499 LSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNEC 558
S + D Y+FG+++ E+++G + ++ G + D S + C
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-------IFMVGRGYLSPDLSKVRSNC 243
Query: 559 TKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSL 598
K + E C + + RP +++A ++ + SL
Sbjct: 244 PKAMKRLMAE----CLKKKRDERPLFPQILASIELLARSL 279
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 134/280 (47%), Gaps = 25/280 (8%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAI-GISRRTLSDFENEVRLISNVHHRNLIRLLG 383
++G G FG +YKG VAVK L + + + L F+NEV ++ H N++ +G
Sbjct: 19 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
++ P+L +V ++ SSL L + + DI TA+G+ YLH II
Sbjct: 77 YSTK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAK---SII 131
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSHLSTKFAGTLGYTAPEYAIHGQ---- 498
HRD+K +N+ L +DL KI DFGLA + + SH + +G++ + APE I Q
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDKNP 190
Query: 499 LSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNEC 558
S + D Y+FG+++ E+++G + ++ G + D S + C
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-------IFMVGRGYLSPDLSKVRSNC 243
Query: 559 TKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSL 598
K + E C + + RP +++A ++ + SL
Sbjct: 244 PKAMKRLMAE----CLKKKRDERPLFPQILASIELLARSL 279
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 134/280 (47%), Gaps = 25/280 (8%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAI-GISRRTLSDFENEVRLISNVHHRNLIRLLG 383
++G G FG +YKG VAVK L + + + L F+NEV ++ H N++ +G
Sbjct: 41 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
++ P+L +V ++ SSL L + + DI TA+G+ YLH II
Sbjct: 99 YSTK-PQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---SII 153
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSHLSTKFAGTLGYTAPEYAIHGQ---- 498
HRD+K +N+ L +DL KI DFGLA + + SH + +G++ + APE I Q
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDKNP 212
Query: 499 LSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNEC 558
S + D Y+FG+++ E+++G + ++ G + D S + C
Sbjct: 213 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-------IFMVGRGYLSPDLSKVRSNC 265
Query: 559 TKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSL 598
K + E C + + RP +++A ++ + SL
Sbjct: 266 PKAMKRLMAE----CLKKKRDERPLFPQILASIELLARSL 301
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 134/280 (47%), Gaps = 25/280 (8%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAI-GISRRTLSDFENEVRLISNVHHRNLIRLLG 383
++G G FG +YKG VAVK L + + + L F+NEV ++ H N++ +G
Sbjct: 42 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
++ P+L +V ++ SSL L + + DI TA+G+ YLH II
Sbjct: 100 YSTK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAK---SII 154
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSHLSTKFAGTLGYTAPEYAIHGQ---- 498
HRD+K +N+ L +DL KI DFGLA + + SH + +G++ + APE I Q
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDKNP 213
Query: 499 LSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNEC 558
S + D Y+FG+++ E+++G + ++ G + D S + C
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-------IFMVGRGYLSPDLSKVRSNC 266
Query: 559 TKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSL 598
K + E C + + RP +++A ++ + SL
Sbjct: 267 PKAMKRLMAE----CLKKKRDERPLFPQILASIELLARSL 302
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 106/203 (52%), Gaps = 12/203 (5%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
K+ + K+GEG +G +YK G+IVA+K++ + + S E+ L+ +HH N+
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
+ L+ L LV+E+M L K L E + L Q + RG+A+ H+
Sbjct: 82 VSLIDVIHSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIYLYQLLRGVAHCHQH- 138
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARL--LPENQSHLSTKFAGTLGYTAPEYAI- 495
RI+HRD+KP N+L++ D K+ADFGLAR +P T TL Y AP+ +
Sbjct: 139 --RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS---YTHEVVTLWYRAPDVLMG 193
Query: 496 HGQLSEKVDAYSFGVLVLEIISG 518
+ S VD +S G + E+I+G
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITG 216
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 106/203 (52%), Gaps = 12/203 (5%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
K+ + K+GEG +G +YK G+IVA+K++ + + S E+ L+ +HH N+
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
+ L+ L LV+E+M L K L E + L Q + RG+A+ H+
Sbjct: 82 VSLIDVIHSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIYLYQLLRGVAHCHQH- 138
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARL--LPENQSHLSTKFAGTLGYTAPEYAI- 495
RI+HRD+KP N+L++ D K+ADFGLAR +P T TL Y AP+ +
Sbjct: 139 --RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS---YTHEVVTLWYRAPDVLMG 193
Query: 496 HGQLSEKVDAYSFGVLVLEIISG 518
+ S VD +S G + E+I+G
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITG 216
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 113/216 (52%), Gaps = 22/216 (10%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISR------RTLSDFENEVRL 369
A + E ++G+GGFG ++KG L K+ +VA+K L +G S +F+ EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
+SN++H N+++L G P +++ E++ L L +K + W + ++L A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLL-DKAHPIKWSVKLRLMLDIAL 133
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLD--DDLQP---KIADFGLARLLPENQSHLSTKFAG 484
G+ Y+ ++ + I+HRD++ N+ L D+ P K+ADFG + + H + G
Sbjct: 134 GIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS----QQSVHSVSGLLG 188
Query: 485 TLGYTAPEY--AIHGQLSEKVDAYSFGVLVLEIISG 518
+ APE A +EK D YSF +++ I++G
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 113/216 (52%), Gaps = 22/216 (10%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISR------RTLSDFENEVRL 369
A + E ++G+GGFG ++KG L K+ +VA+K L +G S +F+ EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
+SN++H N+++L G P +++ E++ L L +K + W + ++L A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLL-DKAHPIKWSVKLRLMLDIAL 133
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLD--DDLQP---KIADFGLARLLPENQSHLSTKFAG 484
G+ Y+ ++ + I+HRD++ N+ L D+ P K+ADF L+ + H + G
Sbjct: 134 GIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS----QQSVHSVSGLLG 188
Query: 485 TLGYTAPEY--AIHGQLSEKVDAYSFGVLVLEIISG 518
+ APE A +EK D YSF +++ I++G
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 145/326 (44%), Gaps = 41/326 (12%)
Query: 294 RGNISEATELQGPVNYRLKDLVSATRKFSEENKLGEGGFGDI----YKGTLKN-GKIVAV 348
+G + A E + P + + L KF ++ LG+G FG + Y N G++VAV
Sbjct: 23 QGAMGSAFEDRDPTQFEERHL-----KFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAV 75
Query: 349 KKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPE--LILVYEYMANSSLDKF 406
KKL + L DFE E+ ++ ++ H N+++ G C L L+ EY+ SL +
Sbjct: 76 KKLQHS-TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 134
Query: 407 LFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFG 466
L K ++ + +G+ YL R IHRD+ N+L++++ + KI DFG
Sbjct: 135 LQKHKE-RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFG 190
Query: 467 LARLLPENQSHLSTKFAG--TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSET 524
L ++LP+++ K G + + APE + S D +SFGV++ E+ + + S++
Sbjct: 191 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 250
Query: 525 KGEE----------GEYLLKRAWRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCT 574
E G+ ++ L +N P+ C E + I C
Sbjct: 251 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP------RPDGCPDE----IYMIMTECW 300
Query: 575 QSAANSRPTMSEVVALLKSTSSSLLG 600
+ N RP+ ++ + + G
Sbjct: 301 NNNVNQRPSFRDLALRVDQIRDQMAG 326
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 48/296 (16%)
Query: 320 KFSEENKLGEGGFGDIY--------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLIS 371
K + LGEG FG + K K VAVK L + + LSD +E+ ++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 372 NV-HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRF--------- 421
+ H+N+I LLG C+Q L ++ EY + +L ++L + + +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 422 --DIILGT---ARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQS 476
D++ T ARG+ YL + IHRD+ NVL+ ++ KIADFGLAR + N
Sbjct: 156 FKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNID 211
Query: 477 HLSTKFAGTL--GYTAPEYAIHGQLSEKVDAYSFGVLVLEI--ISGTKSSETKGEEGEYL 532
+ G L + APE + + D +SFGVL+ EI + G+ EE L
Sbjct: 212 YYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 533 LKRAWRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
LK R MD+ P CT E + + C + + RPT ++V
Sbjct: 272 LKEGHR----------MDK---PANCTNELYMMMRD----CWHAVPSQRPTFKQLV 310
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 134/297 (45%), Gaps = 34/297 (11%)
Query: 326 KLGEGGFGDI----YKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
+LG+G FG + Y N G++VAVKKL + L DFE E+ ++ ++ H N+++
Sbjct: 21 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVK 79
Query: 381 LLGCCSQGPE--LILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
G C L L+ EY+ SL +L K ++ + +G+ YL
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK- 137
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--TLGYTAPEYAIH 496
R IHRD+ N+L++++ + KI DFGL ++LP+++ K G + + APE
Sbjct: 138 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 195
Query: 497 GQLSEKVDAYSFGVLVLEIISGTKSSETKGEE----------GEYLLKRAWRLYENGTHW 546
+ S D +SFGV++ E+ + + S++ E G+ ++ L +N
Sbjct: 196 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 255
Query: 547 ELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLGNKP 603
P+ C E + I C + N RP+ ++ + ++ G P
Sbjct: 256 P------RPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAGLVP 302
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 48/296 (16%)
Query: 320 KFSEENKLGEGGFGDIY--------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLIS 371
K + LGEG FG + K K VAVK L + + LSD +E+ ++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 372 NV-HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRF--------- 421
+ H+N+I LLG C+Q L ++ EY + +L ++L + + +
Sbjct: 96 MIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 422 --DIILGT---ARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQS 476
D++ T ARG+ YL + IHRD+ NVL+ ++ KIADFGLAR + N
Sbjct: 156 FKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNID 211
Query: 477 HLSTKFAGTL--GYTAPEYAIHGQLSEKVDAYSFGVLVLEI--ISGTKSSETKGEEGEYL 532
+ G L + APE + + D +SFGVL+ EI + G+ EE L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 533 LKRAWRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
LK R MD+ P CT E + + C + + RPT ++V
Sbjct: 272 LKEGHR----------MDK---PANCTNELYMMMRD----CWHAVPSQRPTFKQLV 310
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 133/294 (45%), Gaps = 34/294 (11%)
Query: 326 KLGEGGFGDI----YKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
+LG+G FG + Y N G++VAVKKL + L DFE E+ ++ ++ H N+++
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVK 75
Query: 381 LLGCCSQGPE--LILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
G C L L+ EY+ SL +L K ++ + +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK- 133
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--TLGYTAPEYAIH 496
R IHRD+ N+L++++ + KI DFGL ++LP+++ K G + + APE
Sbjct: 134 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTE 191
Query: 497 GQLSEKVDAYSFGVLVLEIISGTKSSETKGEE----------GEYLLKRAWRLYENGTHW 546
+ S D +SFGV++ E+ + + S++ E G+ ++ L +N
Sbjct: 192 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 251
Query: 547 ELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
P+ C E + I C + N RP+ ++ + ++ G
Sbjct: 252 P------RPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 295
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 48/296 (16%)
Query: 320 KFSEENKLGEGGFGDIY--------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLIS 371
K + LGEG FG + K K VAVK L + + LSD +E+ ++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 372 NV-HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRF--------- 421
+ H+N+I LLG C+Q L ++ EY + +L ++L + + +
Sbjct: 96 MIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 422 --DIILGT---ARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQS 476
D++ T ARG+ YL + IHRD+ NVL+ ++ KIADFGLAR + N
Sbjct: 156 FKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNID 211
Query: 477 HLSTKFAGTL--GYTAPEYAIHGQLSEKVDAYSFGVLVLEI--ISGTKSSETKGEEGEYL 532
+ G L + APE + + D +SFGVL+ EI + G+ EE L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 533 LKRAWRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
LK R MD+ P CT E + + C + + RPT ++V
Sbjct: 272 LKEGHR----------MDK---PANCTNELYMMMRD----CWHAVPSQRPTFKQLV 310
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 133/294 (45%), Gaps = 34/294 (11%)
Query: 326 KLGEGGFGDI----YKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
+LG+G FG + Y N G++VAVKKL + L DFE E+ ++ ++ H N+++
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVK 80
Query: 381 LLGCCSQGPE--LILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
G C L L+ EY+ SL +L K ++ + +G+ YL
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK- 138
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--TLGYTAPEYAIH 496
R IHRD+ N+L++++ + KI DFGL ++LP+++ K G + + APE
Sbjct: 139 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 196
Query: 497 GQLSEKVDAYSFGVLVLEIISGTKSSETKGEE----------GEYLLKRAWRLYENGTHW 546
+ S D +SFGV++ E+ + + S++ E G+ ++ L +N
Sbjct: 197 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 256
Query: 547 ELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
P+ C E + I C + N RP+ ++ + ++ G
Sbjct: 257 P------RPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 300
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 133/280 (47%), Gaps = 25/280 (8%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAI-GISRRTLSDFENEVRLISNVHHRNLIRLLG 383
++G G FG +YKG VAVK L + + + L F+NEV ++ H N++ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
++ P+L +V ++ SSL L + + DI TA+G+ YLH II
Sbjct: 72 YSTK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAK---SII 126
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSHLSTKFAGTLGYTAPEYAIHGQ---- 498
HRD+K +N+ L +DL KI DFGLA + SH + +G++ + APE I Q
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE-VIRMQDKNP 185
Query: 499 LSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNEC 558
S + D Y+FG+++ E+++G + ++ G + D S + C
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-------IFMVGRGYLSPDLSKVRSNC 238
Query: 559 TKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSL 598
K + E C + + RP +++A ++ + SL
Sbjct: 239 PKAMKRLMAE----CLKKKRDERPLFPQILASIELLARSL 274
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 48/296 (16%)
Query: 320 KFSEENKLGEGGFGDIY--------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLIS 371
K + LGEG FG + K K VAVK L + + LSD +E+ ++
Sbjct: 82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 141
Query: 372 NV-HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRF--------- 421
+ H+N+I LLG C+Q L ++ EY + +L ++L + + +
Sbjct: 142 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 201
Query: 422 --DIILGT---ARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQS 476
D++ T ARG+ YL + IHRD+ NVL+ ++ KIADFGLAR + N
Sbjct: 202 FKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNID 257
Query: 477 HLSTKFAGTLG--YTAPEYAIHGQLSEKVDAYSFGVLVLEI--ISGTKSSETKGEEGEYL 532
+ G L + APE + + D +SFGVL+ EI + G+ EE L
Sbjct: 258 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 317
Query: 533 LKRAWRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
LK R MD+ P CT E + + C + + RPT ++V
Sbjct: 318 LKEGHR----------MDK---PANCTNELYMMMRD----CWHAVPSQRPTFKQLV 356
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 48/296 (16%)
Query: 320 KFSEENKLGEGGFGDIY--------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLIS 371
K + LGEG FG + K K VAVK L + + LSD +E+ ++
Sbjct: 23 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 82
Query: 372 NV-HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRF--------- 421
+ H+N+I LLG C+Q L ++ EY + +L ++L + + +
Sbjct: 83 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 142
Query: 422 --DIILGT---ARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQS 476
D++ T ARG+ YL + IHRD+ NVL+ ++ KIADFGLAR + N
Sbjct: 143 FKDLVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDI-NNID 198
Query: 477 HLSTKFAGTL--GYTAPEYAIHGQLSEKVDAYSFGVLVLEI--ISGTKSSETKGEEGEYL 532
+ G L + APE + + D +SFGVL+ EI + G+ EE L
Sbjct: 199 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 258
Query: 533 LKRAWRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
LK R MD+ P CT E + + C + + RPT ++V
Sbjct: 259 LKEGHR----------MDK---PANCTNELYMMMRD----CWHAVPSQRPTFKQLV 297
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 133/280 (47%), Gaps = 25/280 (8%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAI-GISRRTLSDFENEVRLISNVHHRNLIRLLG 383
++G G FG +YKG VAVK L + + + L F+NEV ++ H N++ +G
Sbjct: 34 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
++ P+L +V ++ SSL L + + DI TA+G+ YLH II
Sbjct: 92 YSTK-PQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---SII 146
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSHLSTKFAGTLGYTAPEYAIHGQ---- 498
HRD+K +N+ L +DL KI DFGLA + SH + +G++ + APE I Q
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE-VIRMQDKNP 205
Query: 499 LSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNEC 558
S + D Y+FG+++ E+++G + ++ G + D S + C
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-------IFMVGRGYLSPDLSKVRSNC 258
Query: 559 TKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSL 598
K + E C + + RP +++A ++ + SL
Sbjct: 259 PKAMKRLMAE----CLKKKRDERPLFPQILASIELLARSL 294
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 133/294 (45%), Gaps = 34/294 (11%)
Query: 326 KLGEGGFGDI----YKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
+LG+G FG + Y N G++VAVKKL + L DFE E+ ++ ++ H N+++
Sbjct: 23 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVK 81
Query: 381 LLGCCSQGPE--LILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
G C L L+ EY+ SL +L K ++ + +G+ YL
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK- 139
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--TLGYTAPEYAIH 496
R IHRD+ N+L++++ + KI DFGL ++LP+++ K G + + APE
Sbjct: 140 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 197
Query: 497 GQLSEKVDAYSFGVLVLEIISGTKSSETKGEE----------GEYLLKRAWRLYENGTHW 546
+ S D +SFGV++ E+ + + S++ E G+ ++ L +N
Sbjct: 198 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 257
Query: 547 ELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
P+ C E + I C + N RP+ ++ + ++ G
Sbjct: 258 P------RPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 301
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 133/294 (45%), Gaps = 34/294 (11%)
Query: 326 KLGEGGFGDI----YKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
+LG+G FG + Y N G++VAVKKL + L DFE E+ ++ ++ H N+++
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVK 75
Query: 381 LLGCCSQGPE--LILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
G C L L+ EY+ SL +L K ++ + +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK- 133
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--TLGYTAPEYAIH 496
R IHRD+ N+L++++ + KI DFGL ++LP+++ K G + + APE
Sbjct: 134 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 497 GQLSEKVDAYSFGVLVLEIISGTKSSETKGEE----------GEYLLKRAWRLYENGTHW 546
+ S D +SFGV++ E+ + + S++ E G+ ++ L +N
Sbjct: 192 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 251
Query: 547 ELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
P+ C E + I C + N RP+ ++ + ++ G
Sbjct: 252 P------RPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 295
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 133/294 (45%), Gaps = 34/294 (11%)
Query: 326 KLGEGGFGDI----YKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
+LG+G FG + Y N G++VAVKKL + L DFE E+ ++ ++ H N+++
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVK 82
Query: 381 LLGCCSQGPE--LILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
G C L L+ EY+ SL +L K ++ + +G+ YL
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK- 140
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--TLGYTAPEYAIH 496
R IHRD+ N+L++++ + KI DFGL ++LP+++ K G + + APE
Sbjct: 141 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 198
Query: 497 GQLSEKVDAYSFGVLVLEIISGTKSSETKGEE----------GEYLLKRAWRLYENGTHW 546
+ S D +SFGV++ E+ + + S++ E G+ ++ L +N
Sbjct: 199 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 258
Query: 547 ELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
P+ C E + I C + N RP+ ++ + ++ G
Sbjct: 259 P------RPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 302
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 133/294 (45%), Gaps = 34/294 (11%)
Query: 326 KLGEGGFGDI----YKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
+LG+G FG + Y N G++VAVKKL + L DFE E+ ++ ++ H N+++
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVK 78
Query: 381 LLGCCSQGPE--LILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
G C L L+ EY+ SL +L K ++ + +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK- 136
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--TLGYTAPEYAIH 496
R IHRD+ N+L++++ + KI DFGL ++LP+++ K G + + APE
Sbjct: 137 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 497 GQLSEKVDAYSFGVLVLEIISGTKSSETKGEE----------GEYLLKRAWRLYENGTHW 546
+ S D +SFGV++ E+ + + S++ E G+ ++ L +N
Sbjct: 195 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 254
Query: 547 ELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
P+ C E + I C + N RP+ ++ + ++ G
Sbjct: 255 P------RPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 298
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 133/294 (45%), Gaps = 34/294 (11%)
Query: 326 KLGEGGFGDI----YKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
+LG+G FG + Y N G++VAVKKL + L DFE E+ ++ ++ H N+++
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVK 75
Query: 381 LLGCCSQGPE--LILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
G C L L+ EY+ SL +L K ++ + +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK- 133
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--TLGYTAPEYAIH 496
R IHRD+ N+L++++ + KI DFGL ++LP+++ K G + + APE
Sbjct: 134 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 497 GQLSEKVDAYSFGVLVLEIISGTKSSETKGEE----------GEYLLKRAWRLYENGTHW 546
+ S D +SFGV++ E+ + + S++ E G+ ++ L +N
Sbjct: 192 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 251
Query: 547 ELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
P+ C E + I C + N RP+ ++ + ++ G
Sbjct: 252 P------RPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 295
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 48/296 (16%)
Query: 320 KFSEENKLGEGGFGDIY--------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLIS 371
K + LGEG FG + K K VAVK L + + LSD +E+ ++
Sbjct: 28 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 87
Query: 372 NV-HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRF--------- 421
+ H+N+I LLG C+Q L ++ EY + +L ++L + + +
Sbjct: 88 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 147
Query: 422 --DIILGT---ARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQS 476
D++ T ARG+ YL + IHRD+ NVL+ ++ KIADFGLAR + N
Sbjct: 148 FKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNID 203
Query: 477 HLSTKFAGTL--GYTAPEYAIHGQLSEKVDAYSFGVLVLEI--ISGTKSSETKGEEGEYL 532
+ G L + APE + + D +SFGVL+ EI + G+ EE L
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 263
Query: 533 LKRAWRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
LK R MD+ P CT E + + C + + RPT ++V
Sbjct: 264 LKEGHR----------MDK---PANCTNELYMMMRD----CWHAVPSQRPTFKQLV 302
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 133/280 (47%), Gaps = 25/280 (8%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAI-GISRRTLSDFENEVRLISNVHHRNLIRLLG 383
++G G FG +YKG VAVK L + + + L F+NEV ++ H N++ +G
Sbjct: 42 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
++ P+L +V ++ SSL L + + DI TA+G+ YLH II
Sbjct: 100 YSTK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAK---SII 154
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSHLSTKFAGTLGYTAPEYAIHGQ---- 498
HRD+K +N+ L +DL KI DFGLA + SH + +G++ + APE I Q
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE-VIRMQDKNP 213
Query: 499 LSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNEC 558
S + D Y+FG+++ E+++G + ++ G + D S + C
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-------IFMVGRGYLSPDLSKVRSNC 266
Query: 559 TKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSL 598
K + E C + + RP +++A ++ + SL
Sbjct: 267 PKAMKRLMAE----CLKKKRDERPLFPQILASIELLARSL 302
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 48/296 (16%)
Query: 320 KFSEENKLGEGGFGDIY--------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLIS 371
K + LGEG FG + K K VAVK L + + LSD +E+ ++
Sbjct: 25 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 84
Query: 372 NV-HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRF--------- 421
+ H+N+I LLG C+Q L ++ EY + +L ++L + + +
Sbjct: 85 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 144
Query: 422 --DIILGT---ARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQS 476
D++ T ARG+ YL + IHRD+ NVL+ ++ KIADFGLAR + N
Sbjct: 145 FKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNID 200
Query: 477 HLSTKFAGTL--GYTAPEYAIHGQLSEKVDAYSFGVLVLEI--ISGTKSSETKGEEGEYL 532
+ G L + APE + + D +SFGVL+ EI + G+ EE L
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 260
Query: 533 LKRAWRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
LK R MD+ P CT E + + C + + RPT ++V
Sbjct: 261 LKEGHR----------MDK---PANCTNELYMMMRD----CWHAVPSQRPTFKQLV 299
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 130/296 (43%), Gaps = 48/296 (16%)
Query: 320 KFSEENKLGEGGFGDIY--------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLIS 371
K + LGEG FG + K K VAVK L + LSD +E+ ++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMK 95
Query: 372 NV-HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRF--------- 421
+ H+N+I LLG C+Q L ++ EY + +L ++L + + +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 422 --DIILGT---ARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQS 476
D++ T ARG+ YL + IHRD+ NVL+ ++ KIADFGLAR + N
Sbjct: 156 FKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNID 211
Query: 477 HLSTKFAGTL--GYTAPEYAIHGQLSEKVDAYSFGVLVLEI--ISGTKSSETKGEEGEYL 532
+ G L + APE + + D +SFGVL+ EI + G+ EE L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 533 LKRAWRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
LK R MD+ P CT E + + C + + RPT ++V
Sbjct: 272 LKEGHR----------MDK---PANCTNELYMMMRD----CWHAVPSQRPTFKQLV 310
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 132/294 (44%), Gaps = 34/294 (11%)
Query: 326 KLGEGGFGDI----YKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
+LG+G FG + Y N G++VAVKKL + L DFE E+ ++ ++ H N+++
Sbjct: 15 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVK 73
Query: 381 LLGCCSQGPE--LILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
G C L L+ EY+ SL +L K ++ + +G+ YL
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK- 131
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--TLGYTAPEYAIH 496
R IHRD+ N+L++++ + KI DFGL ++LP+++ K G + + APE
Sbjct: 132 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 189
Query: 497 GQLSEKVDAYSFGVLVLEIISGTKSSETKGEE----------GEYLLKRAWRLYENGTHW 546
+ S D +SFGV++ E+ + + S++ E G+ ++ L +N
Sbjct: 190 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 249
Query: 547 ELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
P+ C E + I C + N RP+ ++ + + G
Sbjct: 250 P------RPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMAG 293
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 131/296 (44%), Gaps = 48/296 (16%)
Query: 320 KFSEENKLGEGGFGDIY--------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLIS 371
K + LGEG FG + K K VAVK L + + LSD +E+ ++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 372 NV-HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRF--------- 421
+ H+N+I LLG C+Q L ++ EY + +L ++L + + +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 422 --DIILGT---ARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQS 476
D++ T ARG+ YL + IHRD+ NVL+ ++ +IADFGLAR + N
Sbjct: 156 FKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDI-NNID 211
Query: 477 HLSTKFAGTL--GYTAPEYAIHGQLSEKVDAYSFGVLVLEI--ISGTKSSETKGEEGEYL 532
+ G L + APE + + D +SFGVL+ EI + G+ EE L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 533 LKRAWRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
LK R MD+ P CT E + + C + + RPT ++V
Sbjct: 272 LKEGHR----------MDK---PANCTNELYMMMRD----CWHAVPSQRPTFKQLV 310
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 131/295 (44%), Gaps = 46/295 (15%)
Query: 320 KFSEENKLGEGGFGDIY--------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLIS 371
K + LGEG FG + K K VAVK L + + LSD +E+ ++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 372 NV-HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRF--------- 421
+ H+N+I LLG C+Q L ++ EY + +L ++L + + +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 422 --DIILGT---ARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQ 475
D++ T ARG+ YL + IHRD+ NVL+ ++ KIADFGLAR + +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDX 212
Query: 476 SHLSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEI--ISGTKSSETKGEEGEYLL 533
+T + + APE + + D +SFGVL+ EI + G+ EE LL
Sbjct: 213 XKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272
Query: 534 KRAWRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
K R MD+ P CT E + + C + + RPT ++V
Sbjct: 273 KEGHR----------MDK---PANCTNELYMMMRD----CWHAVPSQRPTFKQLV 310
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 133/294 (45%), Gaps = 34/294 (11%)
Query: 326 KLGEGGFGDI----YKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
+LG+G FG + Y N G++VAVKKL + L DFE E+ ++ ++ H N+++
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVK 93
Query: 381 LLGCCSQGPE--LILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
G C L L+ EY+ SL +L K ++ + +G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK- 151
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--TLGYTAPEYAIH 496
R IHRD+ N+L++++ + KI DFGL ++LP+++ K G + + APE
Sbjct: 152 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 497 GQLSEKVDAYSFGVLVLEIISGTKSSETKGEE----------GEYLLKRAWRLYENGTHW 546
+ S D +SFGV++ E+ + + S++ E G+ ++ L +N
Sbjct: 210 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 269
Query: 547 ELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
P+ C E + I C + N RP+ ++ + ++ G
Sbjct: 270 P------RPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 313
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 134/294 (45%), Gaps = 34/294 (11%)
Query: 326 KLGEGGFGDI----YKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
+LG+G FG + Y N G++VAVKKL + L DFE E+ ++ ++ H N+++
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVK 76
Query: 381 LLGCCSQGPE--LILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
G C L L+ EY+ SL +L K ++ + +G+ YL
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK- 134
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--TLGYTAPEYAIH 496
R IHR++ N+L++++ + KI DFGL ++LP+++ + K G + + APE
Sbjct: 135 --RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTE 192
Query: 497 GQLSEKVDAYSFGVLVLEIISGTKSSETKGEE----------GEYLLKRAWRLYENGTHW 546
+ S D +SFGV++ E+ + + S++ E G+ ++ L +N
Sbjct: 193 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 252
Query: 547 ELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
P+ C E + I C + N RP+ ++ + ++ G
Sbjct: 253 P------RPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 296
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 121/292 (41%), Gaps = 33/292 (11%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCCS 386
LG+G FG K T + V V K I T F EV+++ + H N+++ +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 387 QGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRD 446
+ L + EY+ +L + + W QR A G+AYLH + IIHRD
Sbjct: 78 KDKRLNFITEYIKGGTL-RGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRD 133
Query: 447 IKPSNVLLDDDLQPKIADFGLARLL------PENQSHLSTK-------FAGTLGYTAPEY 493
+ N L+ ++ +ADFGLARL+ PE L G + APE
Sbjct: 134 LNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM 193
Query: 494 AIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWE-LMDES 552
EKVD +SFG+++ EII + + +YL R + G + +D
Sbjct: 194 INGRSYDEKVDVFSFGIVLCEIIGRVNA------DPDYLP----RTMDFGLNVRGFLDRY 243
Query: 553 LDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLGNKPL 604
PN I + C RP+ ++ L++ L G+ PL
Sbjct: 244 CPPN-----CPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGHLPL 290
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 126/292 (43%), Gaps = 54/292 (18%)
Query: 327 LGEGGFGDIY--------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRN 377
LGEG FG + K VAVK L + + LSD +E+ ++ + H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 378 LIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNW--------------KQRFDI 423
+I LLG C+Q L ++ EY + +L ++L + L + K
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 424 ILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA 483
ARG+ YL + IHRD+ NVL+ +D KIADFGLAR + H+
Sbjct: 141 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 193
Query: 484 GTLG-----YTAPEYAIHGQLSEKVDAYSFGVLVLEI--ISGTKSSETKGEEGEYLLKRA 536
T G + APE + + D +SFGVL+ EI + G+ EE LLK
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 253
Query: 537 WRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
R MD+ P+ CT E + + C + + RPT ++V
Sbjct: 254 HR----------MDK---PSNCTNELYMMMRD----CWHAVPSQRPTFKQLV 288
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 134/296 (45%), Gaps = 38/296 (12%)
Query: 326 KLGEGGFGDI----YKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
+LG+G FG + Y N G++VAVKKL + L DFE E+ ++ ++ H N+++
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVK 78
Query: 381 LLGCCSQGPE--LILVYEYMANSSLDKFL--FGEKRGSLNWKQRFDIILGTARGLAYLHE 436
G C L L+ EY+ SL +L E+ + Q I +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQI---CKGMEYLGT 135
Query: 437 DFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--TLGYTAPEYA 494
R IHRD+ N+L++++ + KI DFGL ++LP+++ K G + + APE
Sbjct: 136 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 495 IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEE----------GEYLLKRAWRLYENGT 544
+ S D +SFGV++ E+ + + S++ E G+ ++ L +N
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 252
Query: 545 HWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
P+ C E + I C + N RP+ ++ + ++ G
Sbjct: 253 RLP------RPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 298
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 126/292 (43%), Gaps = 54/292 (18%)
Query: 327 LGEGGFGDIY--------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRN 377
LGEG FG + K VAVK L + + LSD +E+ ++ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 378 LIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNW--------------KQRFDI 423
+I LLG C+Q L ++ EY + +L ++L + L + K
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 424 ILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA 483
ARG+ YL + IHRD+ NVL+ +D KIADFGLAR + H+
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDXXKK 208
Query: 484 GTLG-----YTAPEYAIHGQLSEKVDAYSFGVLVLEI--ISGTKSSETKGEEGEYLLKRA 536
T G + APE + + D +SFGVL+ EI + G+ EE LLK
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 268
Query: 537 WRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
R MD+ P+ CT E + + C + + RPT ++V
Sbjct: 269 HR----------MDK---PSNCTNELYMMMRD----CWHAVPSQRPTFKQLV 303
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 109/227 (48%), Gaps = 28/227 (12%)
Query: 305 GPVNYRLKDLVSATRKFSEENKLGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISR 357
GP + L+D F LG+G FG++Y K K I+A+K L G+
Sbjct: 1 GPRQWALED-------FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH 53
Query: 358 RTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNW 417
+ EV + S++ H N++RL G + L+ EY ++ + L +K +
Sbjct: 54 Q----LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDE 107
Query: 418 KQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH 477
++ I A L+Y H R+IHRDIKP N+LL + KIADFG + P ++
Sbjct: 108 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-- 162
Query: 478 LSTKFAGTLGYTAPEYAIHGQLS-EKVDAYSFGVLVLEIISGTKSSE 523
T+ GTL Y PE I G++ EKVD +S GVL E + G E
Sbjct: 163 -RTELCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 126/292 (43%), Gaps = 54/292 (18%)
Query: 327 LGEGGFGDIY--------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRN 377
LGEG FG + K VAVK L + + LSD +E+ ++ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 378 LIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNW--------------KQRFDI 423
+I LLG C+Q L ++ EY + +L ++L + L + K
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 424 ILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA 483
ARG+ YL + IHRD+ NVL+ +D KIADFGLAR + H+
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 208
Query: 484 GTLG-----YTAPEYAIHGQLSEKVDAYSFGVLVLEI--ISGTKSSETKGEEGEYLLKRA 536
T G + APE + + D +SFGVL+ EI + G+ EE LLK
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 268
Query: 537 WRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
R MD+ P+ CT E + + C + + RPT ++V
Sbjct: 269 HR----------MDK---PSNCTNELYMMMRD----CWHAVPSQRPTFKQLV 303
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 134/294 (45%), Gaps = 34/294 (11%)
Query: 326 KLGEGGFGDI----YKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
+LG+G FG + Y N G++VAVKKL + L DFE E+ ++ ++ H N+++
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVK 78
Query: 381 LLGCCSQGPE--LILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
G C L L+ E++ SL ++L K ++ + +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK- 136
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--TLGYTAPEYAIH 496
R IHRD+ N+L++++ + KI DFGL ++LP+++ K G + + APE
Sbjct: 137 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 497 GQLSEKVDAYSFGVLVLEIISGTKSSETKGEE----------GEYLLKRAWRLYENGTHW 546
+ S D +SFGV++ E+ + + S++ E G+ ++ L +N
Sbjct: 195 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 254
Query: 547 ELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
P+ C E + I C + N RP+ ++ + ++ G
Sbjct: 255 P------RPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 298
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 126/292 (43%), Gaps = 54/292 (18%)
Query: 327 LGEGGFGDIY--------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRN 377
LGEG FG + K VAVK L + + LSD +E+ ++ + H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 378 LIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNW--------------KQRFDI 423
+I LLG C+Q L ++ EY + +L ++L + L + K
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 424 ILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA 483
ARG+ YL + IHRD+ NVL+ +D KIADFGLAR + H+
Sbjct: 197 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 249
Query: 484 GTLG-----YTAPEYAIHGQLSEKVDAYSFGVLVLEI--ISGTKSSETKGEEGEYLLKRA 536
T G + APE + + D +SFGVL+ EI + G+ EE LLK
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 309
Query: 537 WRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
R MD+ P+ CT E + + C + + RPT ++V
Sbjct: 310 HR----------MDK---PSNCTNELYMMMRD----CWHAVPSQRPTFKQLV 344
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 108/212 (50%), Gaps = 14/212 (6%)
Query: 326 KLGEGGFGDI----YKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
+LG+G FG + Y N G++VAVKKL + L DFE E+ ++ ++ H N+++
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVK 74
Query: 381 LLGCCSQGPE--LILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
G C L L+ EY+ SL +L K ++ + +G+ YL
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK- 132
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--TLGYTAPEYAIH 496
R IHRD+ N+L++++ + KI DFGL ++LP+++ K G + + APE
Sbjct: 133 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 190
Query: 497 GQLSEKVDAYSFGVLVLEIISGTKSSETKGEE 528
+ S D +SFGV++ E+ + + S++ E
Sbjct: 191 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAE 222
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 126/292 (43%), Gaps = 54/292 (18%)
Query: 327 LGEGGFGDIY--------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRN 377
LGEG FG + K VAVK L + + LSD +E+ ++ + H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 378 LIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNW--------------KQRFDI 423
+I LLG C+Q L ++ EY + +L ++L + L + K
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 424 ILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA 483
ARG+ YL + IHRD+ NVL+ +D KIADFGLAR + H+
Sbjct: 149 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 201
Query: 484 GTLG-----YTAPEYAIHGQLSEKVDAYSFGVLVLEI--ISGTKSSETKGEEGEYLLKRA 536
T G + APE + + D +SFGVL+ EI + G+ EE LLK
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 261
Query: 537 WRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
R MD+ P+ CT E + + C + + RPT ++V
Sbjct: 262 HR----------MDK---PSNCTNELYMMMRD----CWHAVPSQRPTFKQLV 296
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 128/295 (43%), Gaps = 46/295 (15%)
Query: 320 KFSEENKLGEGGFGDIY--------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLIS 371
K + LGEG FG + K K VAVK L + + LSD +E+ ++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 372 NV-HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEK--------------RGSLN 416
+ H+N+I LLG C+Q L ++ EY + +L ++L + +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMT 155
Query: 417 WKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQ 475
+K ARG+ YL + IHRD+ NVL+ ++ KIADFGLAR + +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDX 212
Query: 476 SHLSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEI--ISGTKSSETKGEEGEYLL 533
+T + + APE + + D +SFGVL+ EI + G+ EE LL
Sbjct: 213 XKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272
Query: 534 KRAWRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
K R MD+ P CT E + + C + + RPT ++V
Sbjct: 273 KEGHR----------MDK---PANCTNELYMMMRD----CWHAVPSQRPTFKQLV 310
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 126/292 (43%), Gaps = 54/292 (18%)
Query: 327 LGEGGFGDIY--------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRN 377
LGEG FG + K VAVK L + + LSD +E+ ++ + H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 378 LIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNW--------------KQRFDI 423
+I LLG C+Q L ++ EY + +L ++L + L + K
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 424 ILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA 483
ARG+ YL + IHRD+ NVL+ +D KIADFGLAR + H+
Sbjct: 148 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 200
Query: 484 GTLG-----YTAPEYAIHGQLSEKVDAYSFGVLVLEI--ISGTKSSETKGEEGEYLLKRA 536
T G + APE + + D +SFGVL+ EI + G+ EE LLK
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 260
Query: 537 WRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
R MD+ P+ CT E + + C + + RPT ++V
Sbjct: 261 HR----------MDK---PSNCTNELYMMMRD----CWHAVPSQRPTFKQLV 295
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 126/292 (43%), Gaps = 54/292 (18%)
Query: 327 LGEGGFGDIY--------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRN 377
LGEG FG + K VAVK L + + LSD +E+ ++ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 378 LIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNW--------------KQRFDI 423
+I LLG C+Q L ++ EY + +L ++L + L + K
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 424 ILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA 483
ARG+ YL + IHRD+ NVL+ +D KIADFGLAR + H+
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 208
Query: 484 GTLG-----YTAPEYAIHGQLSEKVDAYSFGVLVLEI--ISGTKSSETKGEEGEYLLKRA 536
T G + APE + + D +SFGVL+ EI + G+ EE LLK
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 268
Query: 537 WRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
R MD+ P+ CT E + + C + + RPT ++V
Sbjct: 269 HR----------MDK---PSNCTNELYMMMRD----CWHAVPSQRPTFKQLV 303
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 126/292 (43%), Gaps = 54/292 (18%)
Query: 327 LGEGGFGDIY--------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRN 377
LGEG FG + K VAVK L + + LSD +E+ ++ + H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 378 LIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNW--------------KQRFDI 423
+I LLG C+Q L ++ EY + +L ++L + L + K
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 424 ILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA 483
ARG+ YL + IHRD+ NVL+ +D KIADFGLAR + H+
Sbjct: 145 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 197
Query: 484 GTLG-----YTAPEYAIHGQLSEKVDAYSFGVLVLEI--ISGTKSSETKGEEGEYLLKRA 536
T G + APE + + D +SFGVL+ EI + G+ EE LLK
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 257
Query: 537 WRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
R MD+ P+ CT E + + C + + RPT ++V
Sbjct: 258 HR----------MDK---PSNCTNELYMMMRD----CWHAVPSQRPTFKQLV 292
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 321 FSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLAIG--ISRRTLSDFENEVRLISNVHHRN 377
FS+ ++G G FG +Y ++N ++VA+KK++ S D EVR + + H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 378 LIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHED 437
I+ GC + LV EY S+ D L + L + + G +GLAYLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 173
Query: 438 FHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEYAI- 495
+IHRD+K N+LL + K+ DFG A ++ P N F GT + APE +
Sbjct: 174 ---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWMAPEVILA 224
Query: 496 --HGQLSEKVDAYSFGVLVLEI 515
GQ KVD +S G+ +E+
Sbjct: 225 MDEGQYDGKVDVWSLGITCIEL 246
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 100/205 (48%), Gaps = 21/205 (10%)
Query: 327 LGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRLISNVHHRNLI 379
LG+G FG++Y K K I+A+K L G+ + EV + S++ H N++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEIQSHLRHPNIL 76
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
RL G + L+ EY + K L +K + ++ I A L+Y H
Sbjct: 77 RLYGYFHDATRVYLILEYAPRGEVYKEL--QKLSKFDEQRTATYITELANALSYCHSK-- 132
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
R+IHRDIKP N+LL + KIADFG + P ++ T GTL Y PE I G++
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPE-MIEGRM 187
Query: 500 S-EKVDAYSFGVLVLEIISGTKSSE 523
EKVD +S GVL E + G E
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 130/295 (44%), Gaps = 45/295 (15%)
Query: 326 KLGEGGFGDIYKGTLKN------GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
+LGEG FG ++ N +VAVK L S DF+ E L++ + H++++
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIV 106
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLF-----------GE--KRGSLNWKQRFDIILG 426
R G C++G L++V+EYM + L++FL GE G L Q +
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 427 TARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLAR-LLPENQSHLSTKFAGT 485
A G+ YL + +HRD+ N L+ L KI DFG++R + + + +
Sbjct: 167 VAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 223
Query: 486 LGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTH 545
+ + PE ++ + + + D +SFGV++ EI T G K+ W N
Sbjct: 224 IRWMPPESILYRKFTTESDVWSFGVVLWEIF-------TYG-------KQPWYQLSNTEA 269
Query: 546 WELMDESLD---PNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
+ + + + P C E V I C Q R ++ +V A L++ + +
Sbjct: 270 IDCITQGRELERPRACPPE----VYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 130/295 (44%), Gaps = 45/295 (15%)
Query: 326 KLGEGGFGDIYKGTLKN------GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
+LGEG FG ++ N +VAVK L S DF+ E L++ + H++++
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIV 83
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLF-----------GEK--RGSLNWKQRFDIILG 426
R G C++G L++V+EYM + L++FL GE G L Q +
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 427 TARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLAR-LLPENQSHLSTKFAGT 485
A G+ YL + +HRD+ N L+ L KI DFG++R + + + +
Sbjct: 144 VAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 200
Query: 486 LGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTH 545
+ + PE ++ + + + D +SFGV++ EI T G K+ W N
Sbjct: 201 IRWMPPESILYRKFTTESDVWSFGVVLWEIF-------TYG-------KQPWYQLSNTEA 246
Query: 546 WELMDESLD---PNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
+ + + + P C E V I C Q R ++ +V A L++ + +
Sbjct: 247 IDCITQGRELERPRACPPE----VYAIMRGCWQREPQQRHSIKDVHARLQALAQA 297
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 305 GPVNYRLKDLVSATRKFSEENKLGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISR 357
GP + L+D F LG+G FG++Y K K I+A+K L G+
Sbjct: 1 GPRQWALED-------FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH 53
Query: 358 RTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNW 417
+ EV + S++ H N++RL G + L+ EY ++ + L +K +
Sbjct: 54 Q----LRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDE 107
Query: 418 KQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH 477
++ I A L+Y H R+IHRDIKP N+LL + KIADFG + P ++
Sbjct: 108 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-- 162
Query: 478 LSTKFAGTLGYTAPEYAIHGQLS-EKVDAYSFGVLVLEIISGTKSSETKGEEGEY 531
T GTL Y PE I G++ EKVD +S GVL E + G E + Y
Sbjct: 163 -RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 215
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 130/296 (43%), Gaps = 48/296 (16%)
Query: 320 KFSEENKLGEGGFGDIY--------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLIS 371
K + LGEG FG + K K VAVK L + + LSD +E+ ++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 372 NV-HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRF--------- 421
+ H+N+I LLG C+Q L ++ Y + +L ++L + + +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 422 --DIILGT---ARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQS 476
D++ T ARG+ YL + IHRD+ NVL+ ++ KIADFGLAR + N
Sbjct: 156 FKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNID 211
Query: 477 HLSTKFAGTL--GYTAPEYAIHGQLSEKVDAYSFGVLVLEI--ISGTKSSETKGEEGEYL 532
+ G L + APE + + D +SFGVL+ EI + G+ EE L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 533 LKRAWRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
LK R MD+ P CT E + + C + + RPT ++V
Sbjct: 272 LKEGHR----------MDK---PANCTNELYMMMRD----CWHAVPSQRPTFKQLV 310
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 108/212 (50%), Gaps = 14/212 (6%)
Query: 326 KLGEGGFGDI----YKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
+LG+G FG + Y N G++VAVKKL + L DFE E+ ++ ++ H N+++
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVK 93
Query: 381 LLGCCSQGPE--LILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
G C L L+ EY+ SL +L K ++ + +G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK- 151
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--TLGYTAPEYAIH 496
R IHRD+ N+L++++ + KI DFGL ++LP+++ K G + + APE
Sbjct: 152 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 497 GQLSEKVDAYSFGVLVLEIISGTKSSETKGEE 528
+ S D +SFGV++ E+ + + S++ E
Sbjct: 210 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAE 241
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 130/295 (44%), Gaps = 45/295 (15%)
Query: 326 KLGEGGFGDIYKGTLKN------GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
+LGEG FG ++ N +VAVK L S DF+ E L++ + H++++
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIV 77
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLF-----------GEK--RGSLNWKQRFDIILG 426
R G C++G L++V+EYM + L++FL GE G L Q +
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 427 TARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLAR-LLPENQSHLSTKFAGT 485
A G+ YL + +HRD+ N L+ L KI DFG++R + + + +
Sbjct: 138 VAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 194
Query: 486 LGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTH 545
+ + PE ++ + + + D +SFGV++ EI T G K+ W N
Sbjct: 195 IRWMPPESILYRKFTTESDVWSFGVVLWEIF-------TYG-------KQPWYQLSNTEA 240
Query: 546 WELMDESLD---PNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSS 597
+ + + + P C E V I C Q R ++ +V A L++ + +
Sbjct: 241 IDCITQGRELERPRACPPE----VYAIMRGCWQREPQQRHSIKDVHARLQALAQA 291
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 321 FSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLAIG--ISRRTLSDFENEVRLISNVHHRN 377
FS+ ++G G FG +Y ++N ++VA+KK++ S D EVR + + H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 378 LIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHED 437
I+ GC + LV EY S+ D L + L + + G +GLAYLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 134
Query: 438 FHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEYAI- 495
+IHRD+K N+LL + K+ DFG A ++ P N F GT + APE +
Sbjct: 135 ---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWMAPEVILA 185
Query: 496 --HGQLSEKVDAYSFGVLVLEI 515
GQ KVD +S G+ +E+
Sbjct: 186 MDEGQYDGKVDVWSLGITCIEL 207
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 126/292 (43%), Gaps = 54/292 (18%)
Query: 327 LGEGGFGDIY--------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRN 377
LGEG FG + K VAVK L + + LSD +E+ ++ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 378 LIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNW--------------KQRFDI 423
+I LLG C+Q L ++ EY + +L ++L + L + K
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 424 ILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA 483
ARG+ YL + IHRD+ NVL+ +D KIADFGLAR + H+
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 208
Query: 484 GTLG-----YTAPEYAIHGQLSEKVDAYSFGVLVLEI--ISGTKSSETKGEEGEYLLKRA 536
T G + APE + + D +SFGVL+ EI + G+ EE LLK
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 268
Query: 537 WRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
R MD+ P+ CT E + + C + + RPT ++V
Sbjct: 269 HR----------MDK---PSNCTNELYMMMRD----CWHAVPSQRPTFKQLV 303
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 128/285 (44%), Gaps = 33/285 (11%)
Query: 327 LGEGGFGDIYKGTL--KNGKIV--AVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+G G FG +Y GTL +GK + AVK L +S F E ++ + H N++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 383 GCC--SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G C S+G L+ V YM + L F+ E K L A+G+ YL
Sbjct: 97 GICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASK--- 151
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQS---HLSTKFAGTLGYTAPEYAIHG 497
+ +HRD+ N +LD+ K+ADFGLAR + + + H T + + A E
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQ 211
Query: 498 QLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDP 555
+ + K D +SFGVL+ E+++ + + L + RL L P
Sbjct: 212 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL-------------LQP 258
Query: 556 NECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
C + + E+ L C A RP+ SE+V+ + + S+ +G
Sbjct: 259 EYC----PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 299
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 128/285 (44%), Gaps = 33/285 (11%)
Query: 327 LGEGGFGDIYKGTL--KNGKIV--AVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+G G FG +Y GTL +GK + AVK L +S F E ++ + H N++ LL
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 383 GCC--SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G C S+G L+ V YM + L F+ E K L A+G+ YL
Sbjct: 90 GICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASK--- 144
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQ---SHLSTKFAGTLGYTAPEYAIHG 497
+ +HRD+ N +LD+ K+ADFGLAR + + + H T + + A E
Sbjct: 145 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 204
Query: 498 QLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDP 555
+ + K D +SFGVL+ E+++ + + L + RL L P
Sbjct: 205 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL-------------LQP 251
Query: 556 NECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
C + + E+ L C A RP+ SE+V+ + + S+ +G
Sbjct: 252 EYC----PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 292
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 130/296 (43%), Gaps = 48/296 (16%)
Query: 320 KFSEENKLGEGGFGDIY--------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLIS 371
K + LGEG FG + K K VAVK L + + LSD +E+ ++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 372 NV-HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRF--------- 421
+ H+N+I LLG C+Q L ++ Y + +L ++L + + +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 422 --DIILGT---ARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQS 476
D++ T ARG+ YL + IHRD+ NVL+ ++ KIADFGLAR + N
Sbjct: 156 FKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNID 211
Query: 477 HLSTKFAGTL--GYTAPEYAIHGQLSEKVDAYSFGVLVLEI--ISGTKSSETKGEEGEYL 532
+ G L + APE + + D +SFGVL+ EI + G+ EE L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 533 LKRAWRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
LK R MD+ P CT E + + C + + RPT ++V
Sbjct: 272 LKEGHR----------MDK---PANCTNELYMMMRD----CWHAVPSQRPTFKQLV 310
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 128/285 (44%), Gaps = 33/285 (11%)
Query: 327 LGEGGFGDIYKGTL--KNGKIV--AVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+G G FG +Y GTL +GK + AVK L +S F E ++ + H N++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 383 GCC--SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G C S+G L+ V YM + L F+ E K L A+G+ YL
Sbjct: 97 GICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASK--- 151
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQ---SHLSTKFAGTLGYTAPEYAIHG 497
+ +HRD+ N +LD+ K+ADFGLAR + + + H T + + A E
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 211
Query: 498 QLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDP 555
+ + K D +SFGVL+ E+++ + + L + RL L P
Sbjct: 212 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL-------------LQP 258
Query: 556 NECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
C + + E+ L C A RP+ SE+V+ + + S+ +G
Sbjct: 259 EYC----PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 299
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 128/285 (44%), Gaps = 33/285 (11%)
Query: 327 LGEGGFGDIYKGTL--KNGKIV--AVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+G G FG +Y GTL +GK + AVK L +S F E ++ + H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 383 GCC--SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G C S+G L+ V YM + L F+ E K L A+G+ YL
Sbjct: 98 GICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASK--- 152
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQ---SHLSTKFAGTLGYTAPEYAIHG 497
+ +HRD+ N +LD+ K+ADFGLAR + + + H T + + A E
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 212
Query: 498 QLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDP 555
+ + K D +SFGVL+ E+++ + + L + RL L P
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL-------------LQP 259
Query: 556 NECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
C + + E+ L C A RP+ SE+V+ + + S+ +G
Sbjct: 260 EYC----PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 300
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 128/285 (44%), Gaps = 33/285 (11%)
Query: 327 LGEGGFGDIYKGTL--KNGKIV--AVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+G G FG +Y GTL +GK + AVK L +S F E ++ + H N++ LL
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 383 GCC--SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G C S+G L+ V YM + L F+ E K L A+G+ YL
Sbjct: 117 GICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASK--- 171
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQ---SHLSTKFAGTLGYTAPEYAIHG 497
+ +HRD+ N +LD+ K+ADFGLAR + + + H T + + A E
Sbjct: 172 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 231
Query: 498 QLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDP 555
+ + K D +SFGVL+ E+++ + + L + RL L P
Sbjct: 232 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL-------------LQP 278
Query: 556 NECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
C + + E+ L C A RP+ SE+V+ + + S+ +G
Sbjct: 279 EYC----PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 319
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 101/205 (49%), Gaps = 21/205 (10%)
Query: 327 LGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRLISNVHHRNLI 379
LG+G FG++Y K K I+A+K L G+ + EV + S++ H N++
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEIQSHLRHPNIL 97
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
RL G + L+ EY ++ + L +K + ++ I A L+Y H
Sbjct: 98 RLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSK-- 153
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
R+IHRDIKP N+LL + KIADFG + P ++ T GTL Y PE I G++
Sbjct: 154 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPE-MIEGRM 208
Query: 500 -SEKVDAYSFGVLVLEIISGTKSSE 523
EKVD +S GVL E + G E
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 128/285 (44%), Gaps = 33/285 (11%)
Query: 327 LGEGGFGDIYKGTL--KNGKIV--AVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+G G FG +Y GTL +GK + AVK L +S F E ++ + H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 383 GCC--SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G C S+G L+ V YM + L F+ E K L A+G+ YL
Sbjct: 98 GICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASK--- 152
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQ---SHLSTKFAGTLGYTAPEYAIHG 497
+ +HRD+ N +LD+ K+ADFGLAR + + + H T + + A E
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 212
Query: 498 QLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDP 555
+ + K D +SFGVL+ E+++ + + L + RL L P
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL-------------LQP 259
Query: 556 NECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
C + + E+ L C A RP+ SE+V+ + + S+ +G
Sbjct: 260 EYC----PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 300
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 128/285 (44%), Gaps = 33/285 (11%)
Query: 327 LGEGGFGDIYKGTL--KNGKIV--AVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+G G FG +Y GTL +GK + AVK L +S F E ++ + H N++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 383 GCC--SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G C S+G L+ V YM + L F+ E K L A+G+ YL
Sbjct: 96 GICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASK--- 150
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQ---SHLSTKFAGTLGYTAPEYAIHG 497
+ +HRD+ N +LD+ K+ADFGLAR + + + H T + + A E
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 210
Query: 498 QLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDP 555
+ + K D +SFGVL+ E+++ + + L + RL L P
Sbjct: 211 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL-------------LQP 257
Query: 556 NECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
C + + E+ L C A RP+ SE+V+ + + S+ +G
Sbjct: 258 EYC----PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 298
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 128/285 (44%), Gaps = 33/285 (11%)
Query: 327 LGEGGFGDIYKGTL--KNGKIV--AVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+G G FG +Y GTL +GK + AVK L +S F E ++ + H N++ LL
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 383 GCC--SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G C S+G L+ V YM + L F+ E K L A+G+ YL
Sbjct: 116 GICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASK--- 170
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQ---SHLSTKFAGTLGYTAPEYAIHG 497
+ +HRD+ N +LD+ K+ADFGLAR + + + H T + + A E
Sbjct: 171 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 230
Query: 498 QLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDP 555
+ + K D +SFGVL+ E+++ + + L + RL L P
Sbjct: 231 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL-------------LQP 277
Query: 556 NECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
C + + E+ L C A RP+ SE+V+ + + S+ +G
Sbjct: 278 EYC----PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 318
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 128/285 (44%), Gaps = 33/285 (11%)
Query: 327 LGEGGFGDIYKGTL--KNGKIV--AVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+G G FG +Y GTL +GK + AVK L +S F E ++ + H N++ LL
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 383 GCC--SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G C S+G L+ V YM + L F+ E K L A+G+ YL
Sbjct: 93 GICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASK--- 147
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQ---SHLSTKFAGTLGYTAPEYAIHG 497
+ +HRD+ N +LD+ K+ADFGLAR + + + H T + + A E
Sbjct: 148 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 207
Query: 498 QLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDP 555
+ + K D +SFGVL+ E+++ + + L + RL L P
Sbjct: 208 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL-------------LQP 254
Query: 556 NECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
C + + E+ L C A RP+ SE+V+ + + S+ +G
Sbjct: 255 EYC----PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 128/285 (44%), Gaps = 33/285 (11%)
Query: 327 LGEGGFGDIYKGTL--KNGKIV--AVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+G G FG +Y GTL +GK + AVK L +S F E ++ + H N++ LL
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 383 GCC--SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G C S+G L+ V YM + L F+ E K L A+G+ YL
Sbjct: 95 GICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASK--- 149
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQ---SHLSTKFAGTLGYTAPEYAIHG 497
+ +HRD+ N +LD+ K+ADFGLAR + + + H T + + A E
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 209
Query: 498 QLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDP 555
+ + K D +SFGVL+ E+++ + + L + RL L P
Sbjct: 210 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL-------------LQP 256
Query: 556 NECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
C + + E+ L C A RP+ SE+V+ + + S+ +G
Sbjct: 257 EYC----PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 297
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 101/205 (49%), Gaps = 21/205 (10%)
Query: 327 LGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRLISNVHHRNLI 379
LG+G FG++Y K K I+A+K L G+ + EV + S++ H N++
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEIQSHLRHPNIL 88
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
RL G + L+ EY ++ + L +K + ++ I A L+Y H
Sbjct: 89 RLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSK-- 144
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
R+IHRDIKP N+LL + KIADFG + P ++ T GTL Y PE I G++
Sbjct: 145 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPE-MIEGRM 199
Query: 500 -SEKVDAYSFGVLVLEIISGTKSSE 523
EKVD +S GVL E + G E
Sbjct: 200 HDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 327 LGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRLISNVHHRNLI 379
LG+G FG++Y K K I+A+K L G+ + EV + S++ H N++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEIQSHLRHPNIL 74
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
RL G + L+ EY ++ + L +K + ++ I A L+Y H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSK-- 130
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
R+IHRDIKP N+LL + KIADFG + P ++ T GTL Y PE I G++
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPE-MIEGRM 185
Query: 500 S-EKVDAYSFGVLVLEIISGTKSSETKGEEGEY 531
EKVD +S GVL E + G E + Y
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 218
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
F++ K+G+G FG+++KG + K+VA+K + + + + D + E+ ++S +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+ G + +L ++ EY+ S L + G L+ Q I+ +GL YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSE-- 123
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
+ IHRDIK +NVLL + + K+ADFG+A L + Q +T F GT + APE
Sbjct: 124 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEVIKQSAY 181
Query: 500 SEKVDAYSFGVLVLEIISG 518
K D +S G+ +E+ G
Sbjct: 182 DSKADIWSLGITAIELARG 200
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 105/223 (47%), Gaps = 21/223 (9%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRL 369
A F LG+G FG++Y K K I+A+K L G+ + EV +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEI 61
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
S++ H N++RL G + L+ EY ++ + L +K + ++ I A
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELAN 119
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYT 489
L+Y H R+IHRDIKP N+LL + KIADFG + P ++ T GTL Y
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYL 173
Query: 490 APEYAIHGQLS-EKVDAYSFGVLVLEIISGTKSSETKGEEGEY 531
PE I G++ EKVD +S GVL E + G E + Y
Sbjct: 174 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 215
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 105/223 (47%), Gaps = 21/223 (9%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRL 369
A F LG+G FG++Y K K I+A+K L G+ + EV +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEI 62
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
S++ H N++RL G + L+ EY ++ + L +K + ++ I A
Sbjct: 63 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELAN 120
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYT 489
L+Y H R+IHRDIKP N+LL + KIADFG + P ++ T GTL Y
Sbjct: 121 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYL 174
Query: 490 APEYAIHGQLS-EKVDAYSFGVLVLEIISGTKSSETKGEEGEY 531
PE I G++ EKVD +S GVL E + G E + Y
Sbjct: 175 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 216
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 105/223 (47%), Gaps = 21/223 (9%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRL 369
A F LG+G FG++Y K K I+A+K L G+ + EV +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEI 66
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
S++ H N++RL G + L+ EY ++ + L +K + ++ I A
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELAN 124
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYT 489
L+Y H R+IHRDIKP N+LL + KIADFG + P ++ T GTL Y
Sbjct: 125 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 178
Query: 490 APEYAIHGQLS-EKVDAYSFGVLVLEIISGTKSSETKGEEGEY 531
PE I G++ EKVD +S GVL E + G E + Y
Sbjct: 179 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 220
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 8/199 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
F++ K+G+G FG+++KG + K+VA+K + + + + D + E+ ++S +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+ G + +L ++ EY+ S L + G L+ Q I+ +GL YLH +
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSE-- 143
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
+ IHRDIK +NVLL + + K+ADFG+A L + Q +T F GT + APE
Sbjct: 144 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEVIKQSAY 201
Query: 500 SEKVDAYSFGVLVLEIISG 518
K D +S G+ +E+ G
Sbjct: 202 DSKADIWSLGITAIELARG 220
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 105/223 (47%), Gaps = 21/223 (9%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRL 369
A F LG+G FG++Y K K I+A+K L G+ + EV +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEI 66
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
S++ H N++RL G + L+ EY ++ + L +K + ++ I A
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELAN 124
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYT 489
L+Y H R+IHRDIKP N+LL + KIADFG + P ++ T GTL Y
Sbjct: 125 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYL 178
Query: 490 APEYAIHGQLS-EKVDAYSFGVLVLEIISGTKSSETKGEEGEY 531
PE I G++ EKVD +S GVL E + G E + Y
Sbjct: 179 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 220
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 327 LGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRLISNVHHRNLI 379
LG+G FG++Y K K I+A+K L G+ + EV + S++ H N++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEIQSHLRHPNIL 72
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
RL G + L+ EY ++ + L +K + ++ I A L+Y H
Sbjct: 73 RLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSK-- 128
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
R+IHRDIKP N+LL + KIADFG + P ++ T +GTL Y PE I G++
Sbjct: 129 -RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR---RTTLSGTLDYLPPE-MIEGRM 183
Query: 500 S-EKVDAYSFGVLVLEIISGTKSSE 523
EKVD +S GVL E + G E
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 105/223 (47%), Gaps = 21/223 (9%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRL 369
A F LG+G FG++Y K K I+A+K L G+ + EV +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEI 61
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
S++ H N++RL G + L+ EY ++ + L +K + ++ I A
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELAN 119
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYT 489
L+Y H R+IHRDIKP N+LL + KIADFG + P ++ T GTL Y
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYL 173
Query: 490 APEYAIHGQLS-EKVDAYSFGVLVLEIISGTKSSETKGEEGEY 531
PE I G++ EKVD +S GVL E + G E + Y
Sbjct: 174 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 215
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 134/292 (45%), Gaps = 35/292 (11%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGKI-------VAVKKLAIGISRRTLSDFENEVRL 369
A K + +LG+G FG +Y+G K G + VA+K + S R +F NE +
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 71
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN--------WKQRF 421
+ + +++RLLG SQG +++ E M L +L + N +
Sbjct: 72 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 131
Query: 422 DIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLS-T 480
+ A G+AYL+ + + +HRD+ N ++ +D KI DFG+ R + E +
Sbjct: 132 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 188
Query: 481 KFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLY 540
K + + +PE G + D +SFGV++ EI + + +G E +L+ +
Sbjct: 189 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSNEQVLR---FVM 244
Query: 541 ENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLK 592
E G L+D+ P+ C + + E+ MC Q RP+ E+++ +K
Sbjct: 245 EGG----LLDK---PDNC----PDMLFELMRMCWQYNPKMRPSFLEIISSIK 285
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 99/205 (48%), Gaps = 21/205 (10%)
Query: 327 LGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRLISNVHHRNLI 379
LG+G FG++Y K K I+A+K L G+ + EV + S++ H N++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEIQSHLRHPNIL 76
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
RL G + L+ EY + K L +K + ++ I A L+Y H
Sbjct: 77 RLYGYFHDATRVYLILEYAPRGEVYKEL--QKLSKFDEQRTATYITELANALSYCHSK-- 132
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
R+IHRDIKP N+LL + KIADFG + P ++ GTL Y PE I G++
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLXGTLDYLPPE-MIEGRM 187
Query: 500 S-EKVDAYSFGVLVLEIISGTKSSE 523
EKVD +S GVL E + G E
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRL 369
A F LG+G FG++Y K K I+A+K L G+ + EV +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEI 65
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
S++ H N++RL G + L+ EY ++ + L +K + ++ I A
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELAN 123
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYT 489
L+Y H R+IHRDIKP N+LL + KIADFG + P ++ T GTL Y
Sbjct: 124 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 177
Query: 490 APEYAIHGQLS-EKVDAYSFGVLVLEIISGTKSSE 523
PE I G++ EKVD +S GVL E + G E
Sbjct: 178 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 128/285 (44%), Gaps = 33/285 (11%)
Query: 327 LGEGGFGDIYKGTL--KNGKIV--AVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+G G FG +Y GTL +GK + AVK L +S F E ++ + H N++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 383 GCC--SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G C S+G L+ V YM + L F+ E K L A+G+ +L
Sbjct: 96 GICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASK--- 150
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQ---SHLSTKFAGTLGYTAPEYAIHG 497
+ +HRD+ N +LD+ K+ADFGLAR + + + H T + + A E
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 210
Query: 498 QLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDP 555
+ + K D +SFGVL+ E+++ + + L + RL L P
Sbjct: 211 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL-------------LQP 257
Query: 556 NECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
C + + E+ L C A RP+ SE+V+ + + S+ +G
Sbjct: 258 EYC----PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 298
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 100/199 (50%), Gaps = 8/199 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLKNGK-IVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
F++ +++G+G FG++YKG + K +VA+K + + + + D + E+ ++S +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
R G + +L ++ EY+ S L K G L I+ +GL YLH +
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLL---KPGPLEETYIATILREILKGLDYLHSE-- 135
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
R IHRDIK +NVLL + K+ADFG+A L + Q F GT + APE
Sbjct: 136 -RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPEVIKQSAY 193
Query: 500 SEKVDAYSFGVLVLEIISG 518
K D +S G+ +E+ G
Sbjct: 194 DFKADIWSLGITAIELAKG 212
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 128/285 (44%), Gaps = 33/285 (11%)
Query: 327 LGEGGFGDIYKGTL--KNGKIV--AVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+G G FG +Y GTL +GK + AVK L +S F E ++ + H N++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 383 GCC--SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G C S+G L+ V YM + L F+ E K L A+G+ +L
Sbjct: 99 GICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASK--- 153
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQ---SHLSTKFAGTLGYTAPEYAIHG 497
+ +HRD+ N +LD+ K+ADFGLAR + + + H T + + A E
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 213
Query: 498 QLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDP 555
+ + K D +SFGVL+ E+++ + + L + RL L P
Sbjct: 214 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL-------------LQP 260
Query: 556 NECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
C + + E+ L C A RP+ SE+V+ + + S+ +G
Sbjct: 261 EYC----PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 301
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 130/277 (46%), Gaps = 42/277 (15%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLS-----DFENEVRLISNVHHRNLIR 380
LG G FG +YKG + G+ V + +AI I T +F +E +++++ H +L+R
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIP-VAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 381 LLGCCSQGPELILVYEYMANSSLDKFLFGEKR--GS---LNWKQRFDIILGTARGLAYLH 435
LLG C P + LV + M + L +++ K GS LNW + A+G+ YL
Sbjct: 82 LLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLE 134
Query: 436 EDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGT-LGYTAPEYA 494
E R++HRD+ NVL+ KI DFGLARLL ++ + + + A E
Sbjct: 135 ER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 495 IHGQLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKRAWRLYENGTHWELMDES 552
+ + + + D +S+GV + E+++ G E LL++ RL +
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQ----------- 240
Query: 553 LDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVA 589
P CT + V + + C A+SRP E+ A
Sbjct: 241 --PPICTID----VYMVMVKCWMIDADSRPKFKELAA 271
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 134/292 (45%), Gaps = 35/292 (11%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGKI-------VAVKKLAIGISRRTLSDFENEVRL 369
A K + +LG+G FG +Y+G K G + VA+K + S R +F NE +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 81
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN--------WKQRF 421
+ + +++RLLG SQG +++ E M L +L + N +
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 141
Query: 422 DIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLS-T 480
+ A G+AYL+ + + +HRD+ N ++ +D KI DFG+ R + E +
Sbjct: 142 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 198
Query: 481 KFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLY 540
K + + +PE G + D +SFGV++ EI + + +G E +L+ +
Sbjct: 199 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSNEQVLR---FVM 254
Query: 541 ENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLK 592
E G L+D+ P+ C + + E+ MC Q RP+ E+++ +K
Sbjct: 255 EGG----LLDK---PDNC----PDMLFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 128/285 (44%), Gaps = 33/285 (11%)
Query: 327 LGEGGFGDIYKGTL--KNGKIV--AVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+G G FG +Y GTL +GK + AVK L +S F E ++ + H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 383 GCC--SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G C S+G L+ V YM + L F+ E K L A+G+ +L
Sbjct: 98 GICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASK--- 152
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQ---SHLSTKFAGTLGYTAPEYAIHG 497
+ +HRD+ N +LD+ K+ADFGLAR + + + H T + + A E
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 498 QLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDP 555
+ + K D +SFGVL+ E+++ + + L + RL L P
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL-------------LQP 259
Query: 556 NECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
C + + E+ L C A RP+ SE+V+ + + S+ +G
Sbjct: 260 EYC----PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 300
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRL 369
A F LG+G FG++Y K K I+A+K L G+ + EV +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEI 61
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
S++ H N++RL G + L+ EY ++ + L +K + ++ I A
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELAN 119
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYT 489
L+Y H R+IHRDIKP N+LL + KIADFG + P ++ T GTL Y
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTXLCGTLDYL 173
Query: 490 APEYAIHGQLS-EKVDAYSFGVLVLEIISGTKSSE 523
PE I G++ EKVD +S GVL E + G E
Sbjct: 174 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 105/223 (47%), Gaps = 21/223 (9%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRL 369
A F LG+G FG++Y K K I+A+K L G+ + EV +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEI 60
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
S++ H N++RL G + L+ EY ++ + L +K + ++ I A
Sbjct: 61 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELAN 118
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYT 489
L+Y H R+IHRDIKP N+LL + KIADFG + P ++ T GTL Y
Sbjct: 119 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 172
Query: 490 APEYAIHGQLS-EKVDAYSFGVLVLEIISGTKSSETKGEEGEY 531
PE I G++ EKVD +S GVL E + G E + Y
Sbjct: 173 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 214
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 128/285 (44%), Gaps = 33/285 (11%)
Query: 327 LGEGGFGDIYKGTL--KNGKIV--AVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+G G FG +Y GTL +GK + AVK L +S F E ++ + H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 383 GCC--SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G C S+G L+ V YM + L F+ E K L A+G+ +L
Sbjct: 98 GICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASK--- 152
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQ---SHLSTKFAGTLGYTAPEYAIHG 497
+ +HRD+ N +LD+ K+ADFGLAR + + + H T + + A E
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 498 QLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDP 555
+ + K D +SFGVL+ E+++ + + L + RL L P
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL-------------LQP 259
Query: 556 NECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
C + + E+ L C A RP+ SE+V+ + + S+ +G
Sbjct: 260 EYC----PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 300
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRL 369
A F LG+G FG++Y K K I+A+K L G+ + EV +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEI 64
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
S++ H N++RL G + L+ EY ++ + L +K + ++ I A
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELAN 122
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYT 489
L+Y H R+IHRDIKP N+LL + KIADFG + P ++ T GTL Y
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 176
Query: 490 APEYAIHGQLS-EKVDAYSFGVLVLEIISGTKSSE 523
PE I G++ EKVD +S GVL E + G E
Sbjct: 177 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 128/285 (44%), Gaps = 33/285 (11%)
Query: 327 LGEGGFGDIYKGTL--KNGKIV--AVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+G G FG +Y GTL +GK + AVK L +S F E ++ + H N++ LL
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 383 GCC--SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G C S+G L+ V YM + L F+ E K L A+G+ +L
Sbjct: 103 GICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASK--- 157
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQ---SHLSTKFAGTLGYTAPEYAIHG 497
+ +HRD+ N +LD+ K+ADFGLAR + + + H T + + A E
Sbjct: 158 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 217
Query: 498 QLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDP 555
+ + K D +SFGVL+ E+++ + + L + RL L P
Sbjct: 218 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL-------------LQP 264
Query: 556 NECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
C + + E+ L C A RP+ SE+V+ + + S+ +G
Sbjct: 265 EYC----PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 305
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 327 LGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRLISNVHHRNLI 379
LG+G FG++Y + K I+A+K L G+ + EV + S++ H N++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQ----LRREVEIQSHLRHPNIL 75
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
RL G + L+ EY ++ + L +K + ++ I A L+Y H
Sbjct: 76 RLYGYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQRTATYITELANALSYCHSK-- 131
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
R+IHRDIKP N+LL + + KIADFG + P ++ T GTL Y PE I G++
Sbjct: 132 -RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPE-MIEGRM 186
Query: 500 S-EKVDAYSFGVLVLEIISGTKSSETKGEEGEY 531
EKVD +S GVL E + G E + Y
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETY 219
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 128/285 (44%), Gaps = 33/285 (11%)
Query: 327 LGEGGFGDIYKGTL--KNGKIV--AVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+G G FG +Y GTL +GK + AVK L +S F E ++ + H N++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 383 GCC--SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G C S+G L+ V YM + L F+ E K L A+G+ +L
Sbjct: 99 GICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASK--- 153
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQ---SHLSTKFAGTLGYTAPEYAIHG 497
+ +HRD+ N +LD+ K+ADFGLAR + + + H T + + A E
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQ 213
Query: 498 QLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDP 555
+ + K D +SFGVL+ E+++ + + L + RL L P
Sbjct: 214 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL-------------LQP 260
Query: 556 NECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
C + + E+ L C A RP+ SE+V+ + + S+ +G
Sbjct: 261 EYC----PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 301
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 128/285 (44%), Gaps = 33/285 (11%)
Query: 327 LGEGGFGDIYKGTL--KNGKIV--AVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+G G FG +Y GTL +GK + AVK L +S F E ++ + H N++ LL
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 383 GCC--SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G C S+G L+ V YM + L F+ E K L A+G+ +L
Sbjct: 157 GICLRSEGSPLV-VLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASK--- 211
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQ---SHLSTKFAGTLGYTAPEYAIHG 497
+ +HRD+ N +LD+ K+ADFGLAR + + + H T + + A E
Sbjct: 212 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 271
Query: 498 QLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDP 555
+ + K D +SFGVL+ E+++ + + L + RL L P
Sbjct: 272 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL-------------LQP 318
Query: 556 NECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
C + + E+ L C A RP+ SE+V+ + + S+ +G
Sbjct: 319 EYC----PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 359
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 19/214 (8%)
Query: 314 LVSATRKFSEENKLGEGGFGDIYKG-TLKNG-KIVAVKKLAI-----GISRRTLSDFENE 366
L A +++ ++GEG +G ++K LKNG + VA+K++ + G+ T+ +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV- 64
Query: 367 VRLISNVHHRNLIRLLGCCS-----QGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRF 421
+R + H N++RL C+ + +L LV+E++ + L +L + +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK 123
Query: 422 DIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTK 481
D++ RGL +LH R++HRD+KP N+L+ Q K+ADFGLAR+ + T
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTS 178
Query: 482 FAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEI 515
TL Y APE + + VD +S G + E+
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 12/210 (5%)
Query: 326 KLGEGGFGDIYKGTLKNGKI---VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+LG G FG + +G + K VA+K L G + + E +++ + + ++RL+
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C Q L+LV E L KFL G KR + +++ + G+ YL E
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEK---NF 131
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGT--LGYTAPEYAIHGQLS 500
+HRD+ NVLL + KI+DFGL++ L + S+ + + AG L + APE + S
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 501 EKVDAYSFGVLVLEIIS-GTKS-SETKGEE 528
+ D +S+GV + E +S G K + KG E
Sbjct: 192 SRSDVWSYGVTMWEALSYGQKPYKKMKGPE 221
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 135/292 (46%), Gaps = 35/292 (11%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGKI-------VAVKKLAIGISRRTLSDFENEVRL 369
A K + +LG+G FG +Y+G K G + VA+K + S R +F NE +
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 66
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN--------WKQRF 421
+ + +++RLLG SQG +++ E M L +L + N +
Sbjct: 67 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 126
Query: 422 DIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSHLST 480
+ A G+AYL+ + + +HRD+ N ++ +D KI DFG+ R + E +
Sbjct: 127 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGG 183
Query: 481 KFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLY 540
K + + +PE G + D +SFGV++ EI + + +G E +L+ +
Sbjct: 184 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSNEQVLR---FVM 239
Query: 541 ENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLK 592
E G L+D+ P+ C + ++E+ MC Q RP+ E+++ +K
Sbjct: 240 EGG----LLDK---PDNC----PDMLLELMRMCWQYNPKMRPSFLEIISSIK 280
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 130/277 (46%), Gaps = 42/277 (15%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLS-----DFENEVRLISNVHHRNLIR 380
LG G FG +YKG + G+ V + +AI I T +F +E +++++ H +L+R
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIP-VAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 104
Query: 381 LLGCCSQGPELILVYEYMANSSLDKFLFGEKR--GS---LNWKQRFDIILGTARGLAYLH 435
LLG C P + LV + M + L +++ K GS LNW + A+G+ YL
Sbjct: 105 LLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLE 157
Query: 436 EDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGT-LGYTAPEYA 494
E R++HRD+ NVL+ KI DFGLARLL ++ + + + A E
Sbjct: 158 ER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 214
Query: 495 IHGQLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKRAWRLYENGTHWELMDES 552
+ + + + D +S+GV + E+++ G E LL++ RL +
Sbjct: 215 HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQ----------- 263
Query: 553 LDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVA 589
P CT + V + + C A+SRP E+ A
Sbjct: 264 --PPICTID----VYMVMVKCWMIDADSRPKFKELAA 294
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 327 LGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRLISNVHHRNLI 379
LG+G FG++Y K K I+A+K L G+ + EV + S++ H N++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEIQSHLRHPNIL 76
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
RL G + L+ EY ++ + L +K + ++ I A L+Y H
Sbjct: 77 RLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSK-- 132
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
R+IHRDIKP N+LL + KIADFG + P ++ T GTL Y PE
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEXIEGRXH 188
Query: 500 SEKVDAYSFGVLVLEIISGTKSSE 523
EKVD +S GVL E + G E
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 19/214 (8%)
Query: 314 LVSATRKFSEENKLGEGGFGDIYKG-TLKNG-KIVAVKKLAI-----GISRRTLSDFENE 366
L A +++ ++GEG +G ++K LKNG + VA+K++ + G+ T+ +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV- 64
Query: 367 VRLISNVHHRNLIRLLGCCS-----QGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRF 421
+R + H N++RL C+ + +L LV+E++ + L +L + +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK 123
Query: 422 DIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTK 481
D++ RGL +LH R++HRD+KP N+L+ Q K+ADFGLAR+ + T
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTS 178
Query: 482 FAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEI 515
TL Y APE + + VD +S G + E+
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 105/223 (47%), Gaps = 21/223 (9%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRL 369
A F LG+G FG++Y K K I+A+K L G+ + EV +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQ----LRREVEI 58
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
S++ H N++RL G + L+ EY ++ + L +K + ++ I A
Sbjct: 59 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELAN 116
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYT 489
L+Y H R+IHRDIKP N+LL + KIADFG + P ++ T GTL Y
Sbjct: 117 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 170
Query: 490 APEYAIHGQLS-EKVDAYSFGVLVLEIISGTKSSETKGEEGEY 531
PE I G++ EKVD +S GVL E + G E + Y
Sbjct: 171 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 212
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 105/223 (47%), Gaps = 21/223 (9%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRL 369
A F LG+G FG++Y KN K I+A+K L G+ + EV +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQ----LRREVEI 61
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
S++ H N++RL G + L+ EY ++ + L +K + ++ I A
Sbjct: 62 QSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELAN 119
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYT 489
L+Y H ++IHRDIKP N+LL + KIADFG + P ++ GTL Y
Sbjct: 120 ALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYL 173
Query: 490 APEYAIHGQLS-EKVDAYSFGVLVLEIISGTKSSETKGEEGEY 531
PE I G++ EKVD +S GVL E + G E + Y
Sbjct: 174 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTY 215
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 103/199 (51%), Gaps = 8/199 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
F++ ++G+G FG+++KG + ++VA+K + + + + D + E+ ++S +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+ G +G +L ++ EY+ S L + G + Q ++ +GL YLH +
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLL---RAGPFDEFQIATMLKEILKGLDYLHSE-- 139
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
+ IHRDIK +NVLL + K+ADFG+A L + Q +T F GT + APE
Sbjct: 140 -KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEVIQQSAY 197
Query: 500 SEKVDAYSFGVLVLEIISG 518
K D +S G+ +E+ G
Sbjct: 198 DSKADIWSLGITAIELAKG 216
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 134/292 (45%), Gaps = 35/292 (11%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGKI-------VAVKKLAIGISRRTLSDFENEVRL 369
A K + +LG+G FG +Y+G K G + VA+K + S R +F NE +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 75
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN--------WKQRF 421
+ + +++RLLG SQG +++ E M L +L + N +
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 422 DIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSHLST 480
+ A G+AYL+ + + +HRD+ N ++ +D KI DFG+ R + E +
Sbjct: 136 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGG 192
Query: 481 KFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLY 540
K + + +PE G + D +SFGV++ EI + + +G E +L+ +
Sbjct: 193 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSNEQVLR---FVM 248
Query: 541 ENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLK 592
E G L+D+ P+ C + + E+ MC Q RP+ E+++ +K
Sbjct: 249 EGG----LLDK---PDNC----PDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 19/214 (8%)
Query: 314 LVSATRKFSEENKLGEGGFGDIYKG-TLKNG-KIVAVKKLAI-----GISRRTLSDFENE 366
L A +++ ++GEG +G ++K LKNG + VA+K++ + G+ T+ +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV- 64
Query: 367 VRLISNVHHRNLIRLLGCCS-----QGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRF 421
+R + H N++RL C+ + +L LV+E++ + L +L + +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK 123
Query: 422 DIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTK 481
D++ RGL +LH R++HRD+KP N+L+ Q K+ADFGLAR+ + T
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTS 178
Query: 482 FAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEI 515
TL Y APE + + VD +S G + E+
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 104/223 (46%), Gaps = 21/223 (9%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRL 369
A F LG+G FG++Y K K I+A+K L G+ + EV +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEI 64
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
S++ H N++RL G + L+ EY ++ + L +K + ++ I A
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELAN 122
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYT 489
L+Y H R+IHRDIKP N+LL + KIADFG + P ++ GTL Y
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYL 176
Query: 490 APEYAIHGQLS-EKVDAYSFGVLVLEIISGTKSSETKGEEGEY 531
PE I G++ EKVD +S GVL E + G E + Y
Sbjct: 177 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 218
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 8/199 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
F++ K+G+G FG+++KG + K+VA+K + + + + D + E+ ++S +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+ G + +L ++ EY+ S L + G L+ Q I+ +GL YLH +
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSE-- 138
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
+ IHRDIK +NVLL + + K+ADFG+A L + Q F GT + APE
Sbjct: 139 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPEVIKQSAY 196
Query: 500 SEKVDAYSFGVLVLEIISG 518
K D +S G+ +E+ G
Sbjct: 197 DSKADIWSLGITAIELARG 215
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 8/199 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
F++ K+G+G FG+++KG + K+VA+K + + + + D + E+ ++S +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+ G + +L ++ EY+ S L + G L+ Q I+ +GL YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSE-- 123
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
+ IHRDIK +NVLL + + K+ADFG+A L + Q F GT + APE
Sbjct: 124 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPEVIKQSAY 181
Query: 500 SEKVDAYSFGVLVLEIISG 518
K D +S G+ +E+ G
Sbjct: 182 DSKADIWSLGITAIELARG 200
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 327 LGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRLISNVHHRNLI 379
LG+G FG++Y K K I+A+K L G+ + EV + S++ H N++
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEIQSHLRHPNIL 73
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
RL G + L+ EY ++ + L +K + ++ I A L+Y H
Sbjct: 74 RLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSK-- 129
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
R+IHRDIKP N+LL + KIA+FG + P ++ T GTL Y PE I G++
Sbjct: 130 -RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGTLDYLPPE-MIEGRM 184
Query: 500 S-EKVDAYSFGVLVLEIISGTKSSETKGEEGEY 531
EKVD +S GVL E + G E + Y
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 217
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 104/223 (46%), Gaps = 21/223 (9%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRL 369
A F LG+G FG++Y K K I+A+K L G+ + EV +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEI 63
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
S++ H N++RL G + L+ EY ++ + L +K + ++ I A
Sbjct: 64 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELAN 121
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYT 489
L+Y H R+IHRDIKP N+LL + KIADFG + P ++ GTL Y
Sbjct: 122 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYL 175
Query: 490 APEYAIHGQLS-EKVDAYSFGVLVLEIISGTKSSETKGEEGEY 531
PE I G++ EKVD +S GVL E + G E + Y
Sbjct: 176 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 217
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 100/205 (48%), Gaps = 21/205 (10%)
Query: 327 LGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRLISNVHHRNLI 379
LG+G FG++Y K K I+A+K L G+ + EV + S++ H N++
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEIQSHLRHPNIL 97
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
RL G + L+ EY ++ + L +K + ++ I A L+Y H
Sbjct: 98 RLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSK-- 153
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
R+IHRDIKP N+LL + KIADFG + P ++ GTL Y PE I G++
Sbjct: 154 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDDLCGTLDYLPPE-MIEGRM 208
Query: 500 -SEKVDAYSFGVLVLEIISGTKSSE 523
EKVD +S GVL E + G E
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 122/249 (48%), Gaps = 26/249 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAI-----GISRRTLSDFENEVRLISNVH 374
K+ K+GEG +G +YK G+ A+KK+ + GI T+ E+ ++ +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTI----REISILKELK 58
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
H N+++L L+LV+E++ + L K L G L +L G+AY
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL--LPENQSHLSTKFAGTLGYTAPE 492
H+ R++HRD+KP N+L++ + + KIADFGLAR +P + T TL Y AP+
Sbjct: 117 HDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK---YTHEVVTLWYRAPD 170
Query: 493 YAI-HGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLY--ENGTHWELM 549
+ + S +D +S G + E+++GT E + L R +R+ N +W +
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ--LMRIFRILGTPNSKNWPNV 228
Query: 550 DE--SLDPN 556
E DPN
Sbjct: 229 TELPKYDPN 237
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 134/292 (45%), Gaps = 35/292 (11%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGKI-------VAVKKLAIGISRRTLSDFENEVRL 369
A K + +LG+G FG +Y+G K G + VA+K + S R +F NE +
Sbjct: 14 AREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 72
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN--------WKQRF 421
+ + +++RLLG SQG +++ E M L +L + N +
Sbjct: 73 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 132
Query: 422 DIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLS-T 480
+ A G+AYL+ + + +HRD+ N ++ +D KI DFG+ R + E +
Sbjct: 133 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 189
Query: 481 KFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLY 540
K + + +PE G + D +SFGV++ EI + + +G E +L+ +
Sbjct: 190 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSNEQVLR---FVM 245
Query: 541 ENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLK 592
E G L+D+ P+ C + + E+ MC Q RP+ E+++ +K
Sbjct: 246 EGG----LLDK---PDNC----PDMLFELMRMCWQYNPKMRPSFLEIISSIK 286
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 104/211 (49%), Gaps = 26/211 (12%)
Query: 324 ENKLGEGGFGDIYKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+ +LG GGFG + + ++ G+ VA+K+ +S + + E++++ ++H N++
Sbjct: 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR 78
Query: 383 ----GCCSQGPE--LILVYEYMANSSLDKFL------FGEKRGSLNWKQRFDIILGTARG 430
G P +L EY L K+L G K G + ++ +
Sbjct: 79 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDISSA 133
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQ---PKIADFGLARLLPENQSHLSTKFAGTLG 487
L YLHE+ RIIHRD+KP N++L Q KI D G A+ L +Q L T+F GTL
Sbjct: 134 LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQ 188
Query: 488 YTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
Y APE + + VD +SFG L E I+G
Sbjct: 189 YLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 134/292 (45%), Gaps = 35/292 (11%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGKI-------VAVKKLAIGISRRTLSDFENEVRL 369
A K + +LG+G FG +Y+G K G + VA+K + S R +F NE +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 75
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN--------WKQRF 421
+ + +++RLLG SQG +++ E M L +L + N +
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 422 DIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLS-T 480
+ A G+AYL+ + + +HRD+ N ++ +D KI DFG+ R + E +
Sbjct: 136 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 192
Query: 481 KFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLY 540
K + + +PE G + D +SFGV++ EI + + +G E +L+ +
Sbjct: 193 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSNEQVLR---FVM 248
Query: 541 ENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLK 592
E G L+D+ P+ C + + E+ MC Q RP+ E+++ +K
Sbjct: 249 EGG----LLDK---PDNC----PDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 104/223 (46%), Gaps = 21/223 (9%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRL 369
A F LG+G FG++Y K K I+A+K L G+ + EV +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEI 62
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
S++ H N++RL G + L+ EY ++ + L +K + ++ I A
Sbjct: 63 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELAN 120
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYT 489
L+Y H R+IHRDIKP N+LL + KIADFG + P ++ GTL Y
Sbjct: 121 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDTLCGTLDYL 174
Query: 490 APEYAIHGQLS-EKVDAYSFGVLVLEIISGTKSSETKGEEGEY 531
PE I G++ EKVD +S GVL E + G E + Y
Sbjct: 175 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 216
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 104/211 (49%), Gaps = 26/211 (12%)
Query: 324 ENKLGEGGFGDIYKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+ +LG GGFG + + ++ G+ VA+K+ +S + + E++++ ++H N++
Sbjct: 20 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR 79
Query: 383 ----GCCSQGPE--LILVYEYMANSSLDKFL------FGEKRGSLNWKQRFDIILGTARG 430
G P +L EY L K+L G K G + ++ +
Sbjct: 80 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDISSA 134
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQ---PKIADFGLARLLPENQSHLSTKFAGTLG 487
L YLHE+ RIIHRD+KP N++L Q KI D G A+ L +Q L T+F GTL
Sbjct: 135 LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQ 189
Query: 488 YTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
Y APE + + VD +SFG L E I+G
Sbjct: 190 YLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 134/292 (45%), Gaps = 35/292 (11%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGKI-------VAVKKLAIGISRRTLSDFENEVRL 369
A K + +LG+G FG +Y+G K G + VA+K + S R +F NE +
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN--------WKQRF 421
+ + +++RLLG SQG +++ E M L +L + N +
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 422 DIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLS-T 480
+ A G+AYL+ + + +HRD+ N ++ +D KI DFG+ R + E +
Sbjct: 135 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 191
Query: 481 KFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLY 540
K + + +PE G + D +SFGV++ EI + + +G E +L+ +
Sbjct: 192 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSNEQVLR---FVM 247
Query: 541 ENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLK 592
E G L+D+ P+ C + + E+ MC Q RP+ E+++ +K
Sbjct: 248 EGG----LLDK---PDNC----PDMLFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 134/292 (45%), Gaps = 35/292 (11%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGKI-------VAVKKLAIGISRRTLSDFENEVRL 369
A K + +LG+G FG +Y+G K G + VA+K + S R +F NE +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN--------WKQRF 421
+ + +++RLLG SQG +++ E M L +L + N +
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 422 DIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLS-T 480
+ A G+AYL+ + + +HRD+ N ++ +D KI DFG+ R + E +
Sbjct: 129 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 185
Query: 481 KFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLY 540
K + + +PE G + D +SFGV++ EI + + +G E +L+ +
Sbjct: 186 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSNEQVLR---FVM 241
Query: 541 ENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLK 592
E G L+D+ P+ C + + E+ MC Q RP+ E+++ +K
Sbjct: 242 EGG----LLDK---PDNC----PDMLFELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 105/223 (47%), Gaps = 21/223 (9%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRL 369
A F LG+G FG++Y K K I+A+K L G+ + EV +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEI 64
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
S++ H N++RL G + L+ EY ++ + L +K + ++ I A
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELAN 122
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYT 489
L+Y H R+IHRDIKP N+LL + KIA+FG + P ++ T GTL Y
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGTLDYL 176
Query: 490 APEYAIHGQLS-EKVDAYSFGVLVLEIISGTKSSETKGEEGEY 531
PE I G++ EKVD +S GVL E + G E + Y
Sbjct: 177 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 218
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 104/223 (46%), Gaps = 21/223 (9%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRL 369
A F LG+G FG++Y K K I+A+K L G+ + EV +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEI 61
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
S++ H N++RL G + L+ EY ++ + L +K + ++ I A
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELAN 119
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYT 489
L+Y H R+IHRDIKP N+LL + KIADFG + P ++ GTL Y
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYL 173
Query: 490 APEYAIHGQLS-EKVDAYSFGVLVLEIISGTKSSETKGEEGEY 531
PE I G++ EKVD +S GVL E + G E + Y
Sbjct: 174 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 215
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 134/292 (45%), Gaps = 35/292 (11%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGKI-------VAVKKLAIGISRRTLSDFENEVRL 369
A K + +LG+G FG +Y+G K G + VA+K + S R +F NE +
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN--------WKQRF 421
+ + +++RLLG SQG +++ E M L +L + N +
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 422 DIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLS-T 480
+ A G+AYL+ + + +HRD+ N ++ +D KI DFG+ R + E +
Sbjct: 135 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 191
Query: 481 KFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLY 540
K + + +PE G + D +SFGV++ EI + + +G E +L+ +
Sbjct: 192 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSNEQVLR---FVM 247
Query: 541 ENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLK 592
E G L+D+ P+ C + + E+ MC Q RP+ E+++ +K
Sbjct: 248 EGG----LLDK---PDNC----PDMLFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 134/292 (45%), Gaps = 35/292 (11%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGKI-------VAVKKLAIGISRRTLSDFENEVRL 369
A K + +LG+G FG +Y+G K G + VA+K + S R +F NE +
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 103
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN--------WKQRF 421
+ + +++RLLG SQG +++ E M L +L + N +
Sbjct: 104 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 163
Query: 422 DIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLS-T 480
+ A G+AYL+ + + +HRD+ N ++ +D KI DFG+ R + E +
Sbjct: 164 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 220
Query: 481 KFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLY 540
K + + +PE G + D +SFGV++ EI + + +G E +L+ +
Sbjct: 221 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSNEQVLR---FVM 276
Query: 541 ENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLK 592
E G L+D+ P+ C + + E+ MC Q RP+ E+++ +K
Sbjct: 277 EGG----LLDK---PDNC----PDMLFELMRMCWQYNPKMRPSFLEIISSIK 317
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 134/292 (45%), Gaps = 35/292 (11%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGKI-------VAVKKLAIGISRRTLSDFENEVRL 369
A K + +LG+G FG +Y+G K G + VA+K + S R +F NE +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 81
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN--------WKQRF 421
+ + +++RLLG SQG +++ E M L +L + N +
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 141
Query: 422 DIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLS-T 480
+ A G+AYL+ + + +HRD+ N ++ +D KI DFG+ R + E +
Sbjct: 142 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 198
Query: 481 KFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLY 540
K + + +PE G + D +SFGV++ EI + + +G E +L+ +
Sbjct: 199 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSNEQVLR---FVM 254
Query: 541 ENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLK 592
E G L+D+ P+ C + + E+ MC Q RP+ E+++ +K
Sbjct: 255 EGG----LLDK---PDNC----PDMLFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRL 369
A F LG+G FG++Y K K I+A+K L G+ + EV +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEI 61
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
S++ H N++RL G + L+ EY ++ + L +K + ++ I A
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELAN 119
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYT 489
L+Y H R+IHRDIKP N+LL + KIADFG + P ++ GTL Y
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYL 173
Query: 490 APEYAIHGQLS-EKVDAYSFGVLVLEIISGTKSSE 523
PE I G++ EKVD +S GVL E + G E
Sbjct: 174 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 122/249 (48%), Gaps = 26/249 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAI-----GISRRTLSDFENEVRLISNVH 374
K+ K+GEG +G +YK G+ A+KK+ + GI T+ E+ ++ +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTI----REISILKELK 58
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
H N+++L L+LV+E++ + L K L G L +L G+AY
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL--LPENQSHLSTKFAGTLGYTAPE 492
H+ R++HRD+KP N+L++ + + KIADFGLAR +P + T TL Y AP+
Sbjct: 117 HDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK---YTHEIVTLWYRAPD 170
Query: 493 YAI-HGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLY--ENGTHWELM 549
+ + S +D +S G + E+++GT E + L R +R+ N +W +
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ--LMRIFRILGTPNSKNWPNV 228
Query: 550 DE--SLDPN 556
E DPN
Sbjct: 229 TELPKYDPN 237
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRL 369
A F LG+G FG++Y K K I+A+K L G+ + EV +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEI 64
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
S++ H N++RL G + L+ EY ++ + L +K + ++ I A
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELAN 122
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYT 489
L+Y H R+IHRDIKP N+LL + KIADFG + P ++ GTL Y
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYL 176
Query: 490 APEYAIHGQLS-EKVDAYSFGVLVLEIISGTKSSE 523
PE I G++ EKVD +S GVL E + G E
Sbjct: 177 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 111/221 (50%), Gaps = 12/221 (5%)
Query: 326 KLGEGGFGDIYKGTLKNGKI---VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+LG G FG + +G + K VA+K L G + + E +++ + + ++RL+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G C Q L+LV E L KFL G KR + +++ + G+ YL E
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEK---NF 457
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--TLGYTAPEYAIHGQLS 500
+HR++ NVLL + KI+DFGL++ L + S+ + + AG L + APE + S
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 501 EKVDAYSFGVLVLEIIS-GTKS-SETKGEEGEYLLKRAWRL 539
+ D +S+GV + E +S G K + KG E +++ R+
Sbjct: 518 SRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM 558
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 105/200 (52%), Gaps = 13/200 (6%)
Query: 327 LGEGGFGDI----YKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRL 381
LGEG FG + Y N G+ VAVK L ++D + E+ ++ N++H N+++
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 382 LGCCSQ--GPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
G C++ G + L+ E++ + SL ++L + + +N KQ+ + +G+ YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLGSR-- 145
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTK--FAGTLGYTAPEYAIHG 497
+ +HRD+ NVL++ + Q KI DFGL + + ++ + K + + APE +
Sbjct: 146 -QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 204
Query: 498 QLSEKVDAYSFGVLVLEIIS 517
+ D +SFGV + E+++
Sbjct: 205 KFYIASDVWSFGVTLHELLT 224
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 104/198 (52%), Gaps = 17/198 (8%)
Query: 326 KLGEGGFGDIYKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
K+GEG G + T K+ GK VAVKK+ + +R F NEV ++ + HH N++ +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLF-NEVVIMRDYHHDNVVDMYSS 110
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
G EL +V E++ +L + + +N +Q + L R L+YLH +IH
Sbjct: 111 YLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIATVCLSVLRALSYLHNQ---GVIH 164
Query: 445 RDIKPSNVLLDDDLQPKIADFG----LARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLS 500
RDIK ++LL D + K++DFG +++ +P+ + GT + APE
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKX-----LVGTPYWMAPEVISRLPYG 219
Query: 501 EKVDAYSFGVLVLEIISG 518
+VD +S G++V+E+I G
Sbjct: 220 TEVDIWSLGIMVIEMIDG 237
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRL 369
A F LG+G FG++Y K K I+A+K L G+ + EV +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ----LRREVEI 64
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
S++ H N++RL G + L+ EY ++ + L +K + ++ I A
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELAN 122
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYT 489
L+Y H R+IHRDIKP N+LL + KIADFG + P ++ GTL Y
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDDLCGTLDYL 176
Query: 490 APEYAIHGQLS-EKVDAYSFGVLVLEIISGTKSSE 523
PE I G++ EKVD +S GVL E + G E
Sbjct: 177 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 327 LGEGGFGDIYKGTLKNGK-IVAVKKL------AIGISRRTLSDFENEVRLISNVHHRNLI 379
LG+G FG++Y + K I+A+K L G+ + EV + S++ H N++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQ----LRREVEIQSHLRHPNIL 75
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
RL G + L+ EY ++ + L +K + ++ I A L+Y H
Sbjct: 76 RLYGYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQRTATYITELANALSYCHSK-- 131
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
R+IHRDIKP N+LL + + KIADFG + P ++ GTL Y PE I G++
Sbjct: 132 -RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RDTLCGTLDYLPPE-MIEGRM 186
Query: 500 S-EKVDAYSFGVLVLEIISGTKSSETKGEEGEY 531
EKVD +S GVL E + G E + Y
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETY 219
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 134/292 (45%), Gaps = 35/292 (11%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGTLKNGKI-------VAVKKLAIGISRRTLSDFENEVRL 369
A K + +LG+G FG +Y+G K G + VA+K + S R +F NE +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN--------WKQRF 421
+ + +++RLLG SQG +++ E M L +L + N +
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 422 DIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLS-T 480
+ A G+AYL+ + + +HRD+ N + +D KI DFG+ R + E +
Sbjct: 129 QMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGG 185
Query: 481 KFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLY 540
K + + +PE G + D +SFGV++ EI + + +G E +L+ +
Sbjct: 186 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSNEQVLR---FVM 241
Query: 541 ENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLK 592
E G L+D+ P+ C + ++E+ MC Q RP+ E+++ +K
Sbjct: 242 EGG----LLDK---PDNC----PDMLLELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 105/200 (52%), Gaps = 13/200 (6%)
Query: 327 LGEGGFGDI----YKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRL 381
LGEG FG + Y N G+ VAVK L ++D + E+ ++ N++H N+++
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 382 LGCCSQ--GPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
G C++ G + L+ E++ + SL ++L + + +N KQ+ + +G+ YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLGSR-- 133
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTK--FAGTLGYTAPEYAIHG 497
+ +HRD+ NVL++ + Q KI DFGL + + ++ + K + + APE +
Sbjct: 134 -QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 192
Query: 498 QLSEKVDAYSFGVLVLEIIS 517
+ D +SFGV + E+++
Sbjct: 193 KFYIASDVWSFGVTLHELLT 212
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVAVKKL-AIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
++G G FG +YKG VAVK L + + F NEV ++ H N++ +G
Sbjct: 43 RIGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
++ L +V ++ SSL K L ++ Q DI TA+G+ YLH IIH
Sbjct: 101 MTKD-NLAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAK---NIIH 155
Query: 445 RDIKPSNVLLDDDLQPKIADFGLARLLPE-NQSHLSTKFAGTLGYTAPEYAIHGQ----L 499
RD+K +N+ L + L KI DFGLA + + S + G++ + APE I Q
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPE-VIRMQDNNPF 214
Query: 500 SEKVDAYSFGVLVLEIISG 518
S + D YS+G+++ E+++G
Sbjct: 215 SFQSDVYSYGIVLYELMTG 233
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 132/292 (45%), Gaps = 51/292 (17%)
Query: 327 LGEGGFGDIYKGTLKNGK------IVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
LGEG FG + K T + K VAVK L S L D +E ++ V+H ++I+
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 381 LLGCCSQGPELILVYEYMANSSLDKFLFGEKR--------------GSLNWKQRFDIILG 426
L G CSQ L+L+ EY SL FL ++ SL+ + +G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 427 --------TARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHL 478
++G+ YL E ++++HRD+ N+L+ + + KI+DFGL+R + E S++
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 479 S-TKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKR 535
++ + + A E + + D +SFGVL+ EI++ G E LLK
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKT 267
Query: 536 AWRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEV 587
R+ P+ C+ E++ + L C + + RP +++
Sbjct: 268 GHRMER-------------PDNCS----EEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 32/220 (14%)
Query: 327 LGEGGFGDIYKG------TLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
+GEG FG +++ + +VAVK L S +DF+ E L++ + N+++
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 381 LLGCCSQGPELILVYEYMANSSLDKFLFGEKRGS----------------------LNWK 418
LLG C+ G + L++EYMA L++FL + L+
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 419 QRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLAR-LLPENQSH 477
++ I A G+AYL E + +HRD+ N L+ +++ KIADFGL+R + +
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 478 LSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS 517
A + + PE + + + + D +++GV++ EI S
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 121/249 (48%), Gaps = 26/249 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAI-----GISRRTLSDFENEVRLISNVH 374
K+ K+GEG +G +YK G+ A+KK+ + GI T+ E+ ++ +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTI----REISILKELK 58
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
H N+++L L+LV+E++ + L K L G L +L G+AY
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL--LPENQSHLSTKFAGTLGYTAPE 492
H+ R++HRD+KP N+L++ + + KIADFGLAR +P + T TL Y AP+
Sbjct: 117 HDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK---YTHEVVTLWYRAPD 170
Query: 493 YAI-HGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLY--ENGTHWELM 549
+ + S +D +S G + E+++G E + L R +R+ N +W +
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQ--LMRIFRILGTPNSKNWPNV 228
Query: 550 DE--SLDPN 556
E DPN
Sbjct: 229 TELPKYDPN 237
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR T TL Y APE + +
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGXK 179
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 112/215 (52%), Gaps = 22/215 (10%)
Query: 313 DLVSATRKFSEENKLGEGGFGDIYKGTLKN-GKIVAVKKLAIG--------ISRRTLSDF 363
D+ S +++ + + LGEG F +YK KN +IVA+KK+ +G I+R L
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL--- 60
Query: 364 ENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDI 423
E++L+ + H N+I LL + LV+++M + + + L
Sbjct: 61 -REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDL--EVIIKDNSLVLTPSHIKAY 117
Query: 424 ILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKF 482
+L T +GL YLH+ + I+HRD+KP+N+LLD++ K+ADFGLA+ N+++
Sbjct: 118 MLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQ-- 172
Query: 483 AGTLGYTAPEYAIHGQL-SEKVDAYSFGVLVLEII 516
T Y APE ++ VD ++ G ++ E++
Sbjct: 173 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 129
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR T TL Y APE + +
Sbjct: 130 --RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGXK 186
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 187 YYSTAVDIWSLGCIFAEMVT 206
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 121
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR T TL Y APE + +
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 179 YYSTAVDIWSLGCIFAEMVT 198
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR T TL Y APE + +
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 121
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR T TL Y APE + +
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 179 YYSTAVDIWSLGCIFAEMVT 198
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 129
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR T TL Y APE + +
Sbjct: 130 --RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCK 186
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 187 YYSTAVDIWSLGCIFAEMVT 206
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 123
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR T TL Y APE + +
Sbjct: 124 --RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCK 180
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 181 YYSTAVDIWSLGCIFAEMVT 200
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 125/290 (43%), Gaps = 46/290 (15%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI---VAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
++ +GEG FG + K +K + A+K++ S+ DF E+ ++ + HH N+I
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEK--------------RGSLNWKQRFDIIL 425
LLG C L L EY + +L FL + +L+ +Q
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 426 GTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGT 485
ARG+ YL + + IHRD+ N+L+ ++ KIADFGL+R Q K G
Sbjct: 140 DVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVKKTMGR 192
Query: 486 LG--YTAPEYAIHGQLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKRAWRLYE 541
L + A E + + D +S+GVL+ EI+S GT E L + +RL +
Sbjct: 193 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEK 252
Query: 542 NGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P C E V ++ C + RP+ ++++ L
Sbjct: 253 -------------PLNCDDE----VYDLMRQCWREKPYERPSFAQILVSL 285
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR T TL Y APE + +
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 131/292 (44%), Gaps = 51/292 (17%)
Query: 327 LGEGGFGDIYKGTLKNGK------IVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
LGEG FG + K T + K VAVK L S L D +E ++ V+H ++I+
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 381 LLGCCSQGPELILVYEYMANSSLDKFLFGEKR--------------GSLNWKQRFDIILG 426
L G CSQ L+L+ EY SL FL ++ SL+ + +G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 427 --------TARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHL 478
++G+ YL E ++++HRD+ N+L+ + + KI+DFGL+R + E S +
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 479 S-TKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKR 535
++ + + A E + + D +SFGVL+ EI++ G E LLK
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKT 267
Query: 536 AWRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEV 587
R+ P+ C+ E++ + L C + + RP +++
Sbjct: 268 GHRMER-------------PDNCS----EEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 125/290 (43%), Gaps = 46/290 (15%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI---VAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
++ +GEG FG + K +K + A+K++ S+ DF E+ ++ + HH N+I
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEK--------------RGSLNWKQRFDIIL 425
LLG C L L EY + +L FL + +L+ +Q
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 426 GTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGT 485
ARG+ YL + + IHRD+ N+L+ ++ KIADFGL+R Q K G
Sbjct: 150 DVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVKKTMGR 202
Query: 486 LG--YTAPEYAIHGQLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKRAWRLYE 541
L + A E + + D +S+GVL+ EI+S GT E L + +RL +
Sbjct: 203 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEK 262
Query: 542 NGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P C E V ++ C + RP+ ++++ L
Sbjct: 263 -------------PLNCDDE----VYDLMRQCWREKPYERPSFAQILVSL 295
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 126
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR T TL Y APE + +
Sbjct: 127 --RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCK 183
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 184 YYSTAVDIWSLGCIFAEMVT 203
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 325 NKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLG 383
++G G FG+++ G L+ + +VAVK + + F E R++ H N++RL+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
C+Q + +V E + FL E L K ++ A G+ YL I
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG----TLGYTAPEYAIHGQL 499
HRD+ N L+ + KI+DFG++R E + G + +TAPE +G+
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSR---EEADGVXAASGGLRQVPVKWTAPEALNYGRY 292
Query: 500 SEKVDAYSFGVLVLEIIS 517
S + D +SFG+L+ E S
Sbjct: 293 SSESDVWSFGILLWETFS 310
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 108/221 (48%), Gaps = 25/221 (11%)
Query: 330 GGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCCSQGP 389
G FG ++K L N + VAVK I + +++E V + + H N+++ +G +G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEYE--VYSLPGMKHENILQFIGAEKRGT 91
Query: 390 ----ELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF------- 438
+L L+ + SL FL K ++W + I ARGLAYLHED
Sbjct: 92 SVDVDLWLITAFHEKGSLSDFL---KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGH 148
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKF-AGTLGYTAPEY---A 494
I HRDIK NVLL ++L IADFGLA +S T GT Y APE A
Sbjct: 149 KPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGA 208
Query: 495 IHGQLSE--KVDAYSFGVLVLEIISGTKSSETKGEEGEYLL 533
I+ Q ++D Y+ G+++ E+ S + + G EY+L
Sbjct: 209 INFQRDAFLRIDMYAMGLVLWELAS--RCTAADGPVDEYML 247
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR + TL Y APE + +
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 179
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR + TL Y APE + +
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 179
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR + TL Y APE + +
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 179
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 121
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR + TL Y APE + +
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 178
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 179 YYSTAVDIWSLGCIFAEMVT 198
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 121
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR + TL Y APE + +
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 178
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 179 YYSTAVDIWSLGCIFAEMVT 198
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR + TL Y APE + +
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 179
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 124
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR + TL Y APE + +
Sbjct: 125 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 181
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 182 YYSTAVDIWSLGCIFAEMVT 201
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 21/279 (7%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LG G F ++ K K+VA+K +A ENE+ ++ + H N++ L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 386 SQGPELILVYEYMANSSL-DKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
G L L+ + ++ L D+ + ++G + +I + YLH+ + I+H
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIV---EKGFYTERDASRLIFQVLDAVKYLHD---LGIVH 139
Query: 445 RDIKPSNVL---LDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSE 501
RD+KP N+L LD+D + I+DFGL+++ E+ + + GT GY APE S+
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
Query: 502 KVDAYSFGVLVLEIISGTKS--SETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECT 559
VD +S GV+ ++ G E + E +LK + + +W+ + +S +
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF--DSPYWDDISDS--AKDFI 253
Query: 560 KEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSL 598
+ EK E C Q A P ++ AL K+ S+
Sbjct: 254 RHLMEKDPEKRFTCEQ--ALQHPWIAGDTALDKNIHQSV 290
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 123
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR + TL Y APE + +
Sbjct: 124 --RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 180
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 181 YYSTAVDIWSLGCIFAEMVT 200
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 124
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR + TL Y APE + +
Sbjct: 125 --RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 181
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 182 YYSTAVDIWSLGCIFAEMVT 201
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 15/227 (6%)
Query: 299 EATELQGPVNYRLKDLV--SATRK----FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKL 351
E +L+ P +LK L S T++ F KLGEG +G +YK K G+IVA+K++
Sbjct: 3 ETVQLRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV 62
Query: 352 AIGISRRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEK 411
+ L + E+ ++ ++++ G + +L +V EY S+ +
Sbjct: 63 PV---ESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN 119
Query: 412 RGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL 471
+ +L + I+ T +GL YLH +R IHRDIK N+LL+ + K+ADFG+A L
Sbjct: 120 K-TLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175
Query: 472 PENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
+ + GT + APE + D +S G+ +E+ G
Sbjct: 176 TDXMAK-RNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEG 221
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 325 NKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLG 383
++G G FG+++ G L+ + +VAVK + + F E R++ H N++RL+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
C+Q + +V E + FL E L K ++ A G+ YL I
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG----TLGYTAPEYAIHGQL 499
HRD+ N L+ + KI+DFG++R E + G + +TAPE +G+
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSR---EEADGVYAASGGLRQVPVKWTAPEALNYGRY 292
Query: 500 SEKVDAYSFGVLVLEIIS 517
S + D +SFG+L+ E S
Sbjct: 293 SSESDVWSFGILLWETFS 310
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 126
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR + TL Y APE + +
Sbjct: 127 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 183
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 184 YYSTAVDIWSLGCIFAEMVT 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 125
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR + TL Y APE + +
Sbjct: 126 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 183 YYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 124
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR + TL Y APE + +
Sbjct: 125 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 181
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 182 YYSTAVDIWSLGCIFAEMVT 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 125
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR + TL Y APE + +
Sbjct: 126 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 183 YYSTAVDIWSLGCIFAEMVT 202
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 123
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR + TL Y APE + +
Sbjct: 124 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 180
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 181 YYSTAVDIWSLGCIFAEMVT 200
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 21/279 (7%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LG G F ++ K K+VA+K +A ENE+ ++ + H N++ L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 386 SQGPELILVYEYMANSSL-DKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
G L L+ + ++ L D+ + ++G + +I + YLH+ + I+H
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIV---EKGFYTERDASRLIFQVLDAVKYLHD---LGIVH 139
Query: 445 RDIKPSNVL---LDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSE 501
RD+KP N+L LD+D + I+DFGL+++ E+ + + GT GY APE S+
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
Query: 502 KVDAYSFGVLVLEIISGTKS--SETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECT 559
VD +S GV+ ++ G E + E +LK + + +W+ + +S +
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF--DSPYWDDISDS--AKDFI 253
Query: 560 KEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSL 598
+ EK E C Q A P ++ AL K+ S+
Sbjct: 254 RHLMEKDPEKRFTCEQ--ALQHPWIAGDTALDKNIHQSV 290
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 123
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR + TL Y APE + +
Sbjct: 124 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 180
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 181 YYSTAVDIWSLGCIFAEMVT 200
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GL++ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH- 122
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR T TL Y APE + +
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E+++ L KF+ + + +GLA+ H
Sbjct: 66 VKLLDVIHTENKLYLVFEFLS-MDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 123
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR + TL Y APE + +
Sbjct: 124 --RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 180
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 181 YYSTAVDIWSLGCIFAEMVT 200
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 12/195 (6%)
Query: 327 LGEGGFGDIYK-GTLKNGKIVAVKKLA--IGISRRTLSDFENEVRLISNVHHRNLIRLLG 383
LG G FG ++ + NG+ A+K L I + + + +E ++S V H +IR+ G
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
++ ++ +Y+ L L +R N +F L YLH II
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQRFP-NPVAKF-YAAEVCLALEYLHSK---DII 128
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKV 503
+RD+KP N+LLD + KI DFG A+ +P+ ++ GT Y APE ++ +
Sbjct: 129 YRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGTPDYIAPEVVSTKPYNKSI 184
Query: 504 DAYSFGVLVLEIISG 518
D +SFG+L+ E+++G
Sbjct: 185 DWWSFGILIYEMLAG 199
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 21/279 (7%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LG G F ++ K K+VA+K +A ENE+ ++ + H N++ L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 386 SQGPELILVYEYMANSSL-DKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
G L L+ + ++ L D+ + ++G + +I + YLH+ + I+H
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIV---EKGFYTERDASRLIFQVLDAVKYLHD---LGIVH 139
Query: 445 RDIKPSNVL---LDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSE 501
RD+KP N+L LD+D + I+DFGL+++ E+ + + GT GY APE S+
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
Query: 502 KVDAYSFGVLVLEIISGTKS--SETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECT 559
VD +S GV+ ++ G E + E +LK + + +W+ + +S +
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF--DSPYWDDISDS--AKDFI 253
Query: 560 KEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSL 598
+ EK E C Q A P ++ AL K+ S+
Sbjct: 254 RHLMEKDPEKRFTCEQ--ALQHPWIAGDTALDKNIHQSV 290
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E+++ L KF+ + + +GLA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEFLS-MDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 125
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR + TL Y APE + +
Sbjct: 126 --RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 183 YYSTAVDIWSLGCIFAEMVT 202
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 21/279 (7%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LG G F ++ K K+VA+K +A ENE+ ++ + H N++ L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 386 SQGPELILVYEYMANSSL-DKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
G L L+ + ++ L D+ + ++G + +I + YLH+ + I+H
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIV---EKGFYTERDASRLIFQVLDAVKYLHD---LGIVH 139
Query: 445 RDIKPSNVL---LDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSE 501
RD+KP N+L LD+D + I+DFGL+++ E+ + + GT GY APE S+
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
Query: 502 KVDAYSFGVLVLEIISGTKS--SETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECT 559
VD +S GV+ ++ G E + E +LK + + +W+ + +S +
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF--DSPYWDDISDS--AKDFI 253
Query: 560 KEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSL 598
+ EK E C Q A P ++ AL K+ S+
Sbjct: 254 RHLMEKDPEKRFTCEQ--ALQHPWIAGDTALDKNIHQSV 290
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 51/292 (17%)
Query: 327 LGEGGFGDIYKGTLKNGK------IVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
LGEG FG + K T + K VAVK L S L D +E ++ V+H ++I+
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 381 LLGCCSQGPELILVYEYMANSSLDKFLFGEKR--------------GSLNWKQRFDIILG 426
L G CSQ L+L+ EY SL FL ++ SL+ + +G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 427 --------TARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHL 478
++G+ YL E + ++HRD+ N+L+ + + KI+DFGL+R + E S +
Sbjct: 151 DLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 479 S-TKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKR 535
++ + + A E + + D +SFGVL+ EI++ G E LLK
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKT 267
Query: 536 AWRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEV 587
R+ P+ C+ E++ + L C + + RP +++
Sbjct: 268 GHRMER-------------PDNCS----EEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 128/269 (47%), Gaps = 30/269 (11%)
Query: 327 LGEGGFGDIYKGT-LKNG---KI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRL 381
LG G FG ++KG + G KI V +K + R++ + + I ++ H +++RL
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
LG C G L LV +Y+ SL + + RG+L + + + A+G+ YL E
Sbjct: 81 LGLCP-GSSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQIAKGMYYLEEH---G 135
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGT-LGYTAPEYAIHGQLS 500
++HR++ NVLL Q ++ADFG+A LLP + L A T + + A E G+ +
Sbjct: 136 MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYT 195
Query: 501 EKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNEC 558
+ D +S+GV V E+++ + + E LL++ RL + P C
Sbjct: 196 HQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQ-------------PQIC 242
Query: 559 TKEAAEKVVEIALMCTQSAANSRPTMSEV 587
T + V + + C N RPT E+
Sbjct: 243 TID----VYMVMVKCWMIDENIRPTFKEL 267
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 128/269 (47%), Gaps = 30/269 (11%)
Query: 327 LGEGGFGDIYKGT-LKNG---KI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRL 381
LG G FG ++KG + G KI V +K + R++ + + I ++ H +++RL
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
LG C G L LV +Y+ SL + + RG+L + + + A+G+ YL E
Sbjct: 99 LGLCP-GSSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQIAKGMYYLEEH---G 153
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGT-LGYTAPEYAIHGQLS 500
++HR++ NVLL Q ++ADFG+A LLP + L A T + + A E G+ +
Sbjct: 154 MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYT 213
Query: 501 EKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNEC 558
+ D +S+GV V E+++ + + E LL++ RL + P C
Sbjct: 214 HQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQ-------------PQIC 260
Query: 559 TKEAAEKVVEIALMCTQSAANSRPTMSEV 587
T + V + + C N RPT E+
Sbjct: 261 TID----VYMVMVKCWMIDENIRPTFKEL 285
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 125
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR + TL Y APE + +
Sbjct: 126 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 183 YYSTAVDIWSLGCIFAEMVT 202
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+ K+ + + S E+ L+ ++H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR T TL Y APE + +
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+ K+ + + S E+ L+ ++H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L KF+ + + +GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 121
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR T TL Y APE + +
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 179 YYSTAVDIWSLGCIFAEMVT 198
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 125/290 (43%), Gaps = 46/290 (15%)
Query: 324 ENKLGEGGFGDIYKGTLKNGKI---VAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
++ +GEG FG + K +K + A+K++ S+ DF E+ ++ + HH N+I
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEK--------------RGSLNWKQRFDIIL 425
LLG C L L EY + +L FL + +L+ +Q
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 426 GTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGT 485
ARG+ YL + + IHR++ N+L+ ++ KIADFGL+R Q K G
Sbjct: 147 DVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR----GQEVYVKKTMGR 199
Query: 486 LG--YTAPEYAIHGQLSEKVDAYSFGVLVLEIIS--GTKSSETKGEEGEYLLKRAWRLYE 541
L + A E + + D +S+GVL+ EI+S GT E L + +RL +
Sbjct: 200 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEK 259
Query: 542 NGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P C E V ++ C + RP+ ++++ L
Sbjct: 260 -------------PLNCDDE----VYDLMRQCWREKPYERPSFAQILVSL 292
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 94/194 (48%), Gaps = 16/194 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC-C 385
+G+G FGD+ G + K VAVK + + T F E +++ + H NL++LLG
Sbjct: 201 IGKGEFGDVMLGDYRGNK-VAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLLGVIV 256
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+ L +V EYMA SL +L R L L + YL + +HR
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 313
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTL--GYTAPEYAIHGQLSEKV 503
D+ NVL+ +D K++DFGL + ST+ G L +TAPE + S K
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFSTKS 367
Query: 504 DAYSFGVLVLEIIS 517
D +SFG+L+ EI S
Sbjct: 368 DVWSFGILLWEIYS 381
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 16/220 (7%)
Query: 319 RKFSEENKLGEGGFGDI----YKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
R ++LG+G FG + Y N G +VAVK+L + DF+ E++++ +
Sbjct: 7 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ-RDFQREIQILKAL 65
Query: 374 HHRNLIRLLGCCSQGP---ELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
H +++ G S GP EL LV EY+ + L FL R L+ + +G
Sbjct: 66 HSDFIVKYRGV-SYGPGRPELRLVMEYLPSGCLRDFL-QRHRARLDASRLLLYSSQICKG 123
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--TLGY 488
+ YL R +HRD+ N+L++ + KIADFGLA+LLP ++ + G + +
Sbjct: 124 MEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFW 180
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEE 528
APE S + D +SFGV++ E+ + S + E
Sbjct: 181 YAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 220
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 14/214 (6%)
Query: 310 RLKDLVSA---TRKFSEENKLGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDFEN 365
+L+ +VS +K++ K+G+G G +Y + G+ VA++++ + + N
Sbjct: 8 KLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK-ELIIN 66
Query: 366 EVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIIL 425
E+ ++ + N++ L G EL +V EY+A SL + ++ Q +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCR 123
Query: 426 GTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGL-ARLLPENQSHLSTKFAG 484
+ L +LH + ++IHRDIK N+LL D K+ DFG A++ PE QS ST G
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE-QSKRST-MVG 178
Query: 485 TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
T + APE KVD +S G++ +E+I G
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 103/198 (52%), Gaps = 17/198 (8%)
Query: 326 KLGEGGFGDIYKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
K+GEG G + T+++ GK+VAVKK+ + +R F NEV ++ + H N++ +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNS 216
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
G EL +V E++ +L + + +N +Q + L + L+ LH +IH
Sbjct: 217 YLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG---VIH 270
Query: 445 RDIKPSNVLLDDDLQPKIADFG----LARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLS 500
RDIK ++LL D + K++DFG +++ +P + GT + APE
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPELISRLPYG 325
Query: 501 EKVDAYSFGVLVLEIISG 518
+VD +S G++V+E++ G
Sbjct: 326 PEVDIWSLGIMVIEMVDG 343
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 94/194 (48%), Gaps = 16/194 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC-C 385
+G+G FGD+ G + K VAVK + + T F E +++ + H NL++LLG
Sbjct: 29 IGKGEFGDVMLGDYRGNK-VAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+ L +V EYMA SL +L R L L + YL + +HR
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 141
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTL--GYTAPEYAIHGQLSEKV 503
D+ NVL+ +D K++DFGL + ST+ G L +TAPE + S K
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFSTKS 195
Query: 504 DAYSFGVLVLEIIS 517
D +SFG+L+ EI S
Sbjct: 196 DVWSFGILLWEIYS 209
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 94/194 (48%), Gaps = 16/194 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC-C 385
+G+G FGD+ G + K VAVK + + T F E +++ + H NL++LLG
Sbjct: 14 IGKGEFGDVMLGDYRGNK-VAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+ L +V EYMA SL +L R L L + YL + +HR
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 126
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTL--GYTAPEYAIHGQLSEKV 503
D+ NVL+ +D K++DFGL + ST+ G L +TAPE + S K
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFSTKS 180
Query: 504 DAYSFGVLVLEIIS 517
D +SFG+L+ EI S
Sbjct: 181 DVWSFGILLWEIYS 194
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 16/209 (7%)
Query: 319 RKFSEENKLGEGGFGDI----YKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
R ++LG+G FG + Y N G +VAVK+L + DF+ E++++ +
Sbjct: 11 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ-RDFQREIQILKAL 69
Query: 374 HHRNLIRLLGCCSQGP---ELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
H +++ G S GP L LV EY+ + L FL R L+ + +G
Sbjct: 70 HSDFIVKYRGV-SYGPGRQSLRLVMEYLPSGCLRDFL-QRHRARLDASRLLLYSSQICKG 127
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--TLGY 488
+ YL R +HRD+ N+L++ + KIADFGLA+LLP ++ + + G + +
Sbjct: 128 MEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 184
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIIS 517
APE S + D +SFGV++ E+ +
Sbjct: 185 YAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 16/209 (7%)
Query: 319 RKFSEENKLGEGGFGDI----YKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
R ++LG+G FG + Y N G +VAVK+L + DF+ E++++ +
Sbjct: 10 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ-RDFQREIQILKAL 68
Query: 374 HHRNLIRLLGCCSQGP---ELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
H +++ G S GP L LV EY+ + L FL R L+ + +G
Sbjct: 69 HSDFIVKYRGV-SYGPGRQSLRLVMEYLPSGCLRDFL-QRHRARLDASRLLLYSSQICKG 126
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--TLGY 488
+ YL R +HRD+ N+L++ + KIADFGLA+LLP ++ + + G + +
Sbjct: 127 MEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 183
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIIS 517
APE S + D +SFGV++ E+ +
Sbjct: 184 YAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L F+ + + +GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 121
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR T TL Y APE + +
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 179 YYSTAVDIWSLGCIFAEMVT 198
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 111/203 (54%), Gaps = 26/203 (12%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTL--SDF----ENEVRLISNVHHRNLI 379
LGEG FG + T K + VA+K ISR+ L SD E E+ + + H ++I
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALK----FISRQLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRF--DIILGTARGLAYLHED 437
+L + ++++V EY A L ++ +KR + + +RF II + Y H
Sbjct: 73 KLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICA----IEYCHRH 127
Query: 438 FHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHG 497
+I+HRD+KP N+LLDD+L KIADFGL+ ++ + + L T G+ Y APE I+G
Sbjct: 128 ---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG-NFLKTS-CGSPNYAAPE-VING 181
Query: 498 QL--SEKVDAYSFGVLVLEIISG 518
+L +VD +S G+++ ++ G
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVG 204
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 138/308 (44%), Gaps = 32/308 (10%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
F + LG G F ++ K GK+ AVK + + S ENE+ ++ + H N++
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 380 RLLGCCSQGPELILVYEYMANSSL-----DKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
L L LV + ++ L +K + EK S +Q D + YL
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVY-------YL 136
Query: 435 HEDFHVRIIHRDIKPSNVLL---DDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAP 491
H + I+HRD+KP N+L D++ + I+DFGL+++ E + + + GT GY AP
Sbjct: 137 H---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAP 191
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISGTKS--SETKGEEGEYLLKRAWRLYENGTHWELM 549
E S+ VD +S GV+ ++ G E + E +LK + + +W+ +
Sbjct: 192 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEF--DSPYWDDI 249
Query: 550 DESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLGNKPLLKPTF 609
+S + + EK C Q+A + P ++ AL K+ S+ ++ F
Sbjct: 250 SDS--AKDFIRNLMEKDPNKRYTCEQAARH--PWIAGDTALNKNIHESVSAQ---IRKNF 302
Query: 610 VETDYRKT 617
++ +R+
Sbjct: 303 AKSKWRQA 310
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 13/217 (5%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFEN---EVRLISNVHHR 376
F + LG GGFG+++ +K GK+ A KKL ++ ++ E ++++ VH R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG-YQGAMVEKKILAKVHSR 245
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR---GLAY 433
++ L +L LV M + ++ + + Q I TA+ GL +
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF-QEPRAIFYTAQIVSGLEH 304
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
LH+ II+RD+KP NVLLDDD +I+D GLA L Q+ + +AGT G+ APE
Sbjct: 305 LHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPEL 360
Query: 494 AIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGE 530
+ + VD ++ GV + E+I+ +GE+ E
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE 397
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 16/209 (7%)
Query: 319 RKFSEENKLGEGGFGDI----YKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
R ++LG+G FG + Y N G +VAVK+L + DF+ E++++ +
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ-RDFQREIQILKAL 81
Query: 374 HHRNLIRLLGCCSQGP---ELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
H +++ G S GP L LV EY+ + L FL R L+ + +G
Sbjct: 82 HSDFIVKYRGV-SYGPGRQSLRLVMEYLPSGCLRDFL-QRHRARLDASRLLLYSSQICKG 139
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--TLGY 488
+ YL R +HRD+ N+L++ + KIADFGLA+LLP ++ + + G + +
Sbjct: 140 MEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 196
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIIS 517
APE S + D +SFGV++ E+ +
Sbjct: 197 YAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L F+ + + +GLA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 125
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR + TL Y APE + +
Sbjct: 126 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 183 YYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E++ + L F+ + + +GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR + TL Y APE + +
Sbjct: 123 --RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 179
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 93/194 (47%), Gaps = 16/194 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC-C 385
+G+G FGD+ G + K VAVK + + T F E +++ + H NL++LLG
Sbjct: 20 IGKGEFGDVMLGDYRGNK-VAVKCIK---NDATAQAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+ L +V EYMA SL +L R L L + YL + +HR
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 132
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTL--GYTAPEYAIHGQLSEKV 503
D+ NVL+ +D K++DFGL + ST+ G L +TAPE S K
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREAAFSTKS 186
Query: 504 DAYSFGVLVLEIIS 517
D +SFG+L+ EI S
Sbjct: 187 DVWSFGILLWEIYS 200
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 13/217 (5%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFEN---EVRLISNVHHR 376
F + LG GGFG+++ +K GK+ A KKL ++ ++ E ++++ VH R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG-YQGAMVEKKILAKVHSR 245
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR---GLAY 433
++ L +L LV M + ++ + + Q I TA+ GL +
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF-QEPRAIFYTAQIVSGLEH 304
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
LH+ II+RD+KP NVLLDDD +I+D GLA L Q+ + +AGT G+ APE
Sbjct: 305 LHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPEL 360
Query: 494 AIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGE 530
+ + VD ++ GV + E+I+ +GE+ E
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE 397
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 103/198 (52%), Gaps = 17/198 (8%)
Query: 326 KLGEGGFGDIYKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
K+GEG G + T+++ GK+VAVKK+ + +R F NEV ++ + H N++ +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNS 94
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
G EL +V E++ +L + + +N +Q + L + L+ LH +IH
Sbjct: 95 YLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQ---GVIH 148
Query: 445 RDIKPSNVLLDDDLQPKIADFG----LARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLS 500
RDIK ++LL D + K++DFG +++ +P + GT + APE
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPELISRLPYG 203
Query: 501 EKVDAYSFGVLVLEIISG 518
+VD +S G++V+E++ G
Sbjct: 204 PEVDIWSLGIMVIEMVDG 221
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 20/218 (9%)
Query: 311 LKDLVSATRKFSEEN------KLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFE 364
+K TR + E+ +LG+G FG +YK K ++A K+ S L D+
Sbjct: 23 MKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYM 82
Query: 365 NEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDII 424
E+ ++++ H N+++LL L ++ E+ A ++D + +R L Q +
Sbjct: 83 VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-PLTESQIQVVC 141
Query: 425 LGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTK--F 482
T L YLH++ +IIHRD+K N+L D K+ADFG++ +N + + F
Sbjct: 142 KQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRXIQRRDSF 195
Query: 483 AGTLGYTAPEYAI-----HGQLSEKVDAYSFGVLVLEI 515
GT + APE + K D +S G+ ++E+
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 20/218 (9%)
Query: 311 LKDLVSATRKFSEEN------KLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFE 364
+K TR + E+ +LG+G FG +YK K ++A K+ S L D+
Sbjct: 23 MKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYM 82
Query: 365 NEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDII 424
E+ ++++ H N+++LL L ++ E+ A ++D + +R L Q +
Sbjct: 83 VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-PLTESQIQVVC 141
Query: 425 LGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTK--F 482
T L YLH++ +IIHRD+K N+L D K+ADFG++ +N + + F
Sbjct: 142 KQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRXIQRRDXF 195
Query: 483 AGTLGYTAPEYAI-----HGQLSEKVDAYSFGVLVLEI 515
GT + APE + K D +S G+ ++E+
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 13/217 (5%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFEN---EVRLISNVHHR 376
F + LG GGFG+++ +K GK+ A KKL ++ ++ E ++++ VH R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG-YQGAMVEKKILAKVHSR 245
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR---GLAY 433
++ L +L LV M + ++ + + Q I TA+ GL +
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF-QEPRAIFYTAQIVSGLEH 304
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
LH+ II+RD+KP NVLLDDD +I+D GLA L Q+ + +AGT G+ APE
Sbjct: 305 LHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPEL 360
Query: 494 AIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGE 530
+ + VD ++ GV + E+I+ +GE+ E
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE 397
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 13/217 (5%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFEN---EVRLISNVHHR 376
F + LG GGFG+++ +K GK+ A KKL ++ ++ E ++++ VH R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG-YQGAMVEKKILAKVHSR 245
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR---GLAY 433
++ L +L LV M + ++ + + Q I TA+ GL +
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF-QEPRAIFYTAQIVSGLEH 304
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
LH+ II+RD+KP NVLLDDD +I+D GLA L Q+ + +AGT G+ APE
Sbjct: 305 LHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPEL 360
Query: 494 AIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGE 530
+ + VD ++ GV + E+I+ +GE+ E
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE 397
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 32/232 (13%)
Query: 310 RLKDLVSATRKFSEENKLGEGGFGDIYKGTL------KNGKIVAVKKLAIGISRRTLSDF 363
+LK++ + +F EE LGE FG +YKG L + + VA+K L +F
Sbjct: 19 KLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF 76
Query: 364 ENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEK------------ 411
+E L + + H N++ LLG ++ L +++ Y ++ L +FL
Sbjct: 77 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 136
Query: 412 --RGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLAR 469
+ +L ++ A G+ YL ++H+D+ NVL+ D L KI+D GL R
Sbjct: 137 TVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFR 193
Query: 470 LLPENQSHLSTKFAGT----LGYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS 517
E + K G + + APE ++G+ S D +S+GV++ E+ S
Sbjct: 194 ---EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 20/218 (9%)
Query: 311 LKDLVSATRKFSEEN------KLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFE 364
+K TR + E+ +LG+G FG +YK K ++A K+ S L D+
Sbjct: 23 MKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYM 82
Query: 365 NEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDII 424
E+ ++++ H N+++LL L ++ E+ A ++D + +R L Q +
Sbjct: 83 VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-PLTESQIQVVC 141
Query: 425 LGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTK--F 482
T L YLH++ +IIHRD+K N+L D K+ADFG++ +N + + F
Sbjct: 142 KQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRTIQRRDSF 195
Query: 483 AGTLGYTAPEYAI-----HGQLSEKVDAYSFGVLVLEI 515
GT + APE + K D +S G+ ++E+
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 103/198 (52%), Gaps = 17/198 (8%)
Query: 326 KLGEGGFGDIYKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
K+GEG G + T+++ GK+VAVKK+ + +R F NEV ++ + H N++ +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNS 85
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
G EL +V E++ +L + + +N +Q + L + L+ LH +IH
Sbjct: 86 YLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQ---GVIH 139
Query: 445 RDIKPSNVLLDDDLQPKIADFG----LARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLS 500
RDIK ++LL D + K++DFG +++ +P + GT + APE
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPELISRLPYG 194
Query: 501 EKVDAYSFGVLVLEIISG 518
+VD +S G++V+E++ G
Sbjct: 195 PEVDIWSLGIMVIEMVDG 212
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 103/198 (52%), Gaps = 17/198 (8%)
Query: 326 KLGEGGFGDIYKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
K+GEG G + T+++ GK+VAVKK+ + +R F NEV ++ + H N++ +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNS 96
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
G EL +V E++ +L + + +N +Q + L + L+ LH +IH
Sbjct: 97 YLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQ---GVIH 150
Query: 445 RDIKPSNVLLDDDLQPKIADFG----LARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLS 500
RDIK ++LL D + K++DFG +++ +P + GT + APE
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPELISRLPYG 205
Query: 501 EKVDAYSFGVLVLEIISG 518
+VD +S G++V+E++ G
Sbjct: 206 PEVDIWSLGIMVIEMVDG 223
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 316 SATRKFSEENKLGEGGFGDIYKGTLKN-GKIVAVKKLAIGISRRTLSDFE-NEVRLISNV 373
+ K+ +GEG +G + K K+ G+IVA+KK + + E++L+ +
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKF-LFGEKRGSLNWKQRFDIILGTARGLA 432
H NL+ LL C + LV+E++ ++ LD LF L+++ + G+
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFP---NGLDYQVVQKYLFQIINGIG 138
Query: 433 YLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPE 492
+ H IIHRDIKP N+L+ K+ DFG AR L + A T Y APE
Sbjct: 139 FCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA-TRWYRAPE 194
Query: 493 YAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ + + VD ++ G LV E+ G
Sbjct: 195 LLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E+++ L F+ + + +GLA+ H
Sbjct: 67 VKLLDVIHTENKLYLVFEFLS-MDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 124
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR + TL Y APE + +
Sbjct: 125 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 181
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 182 YYSTAVDIWSLGCIFAEMVT 201
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 103/198 (52%), Gaps = 17/198 (8%)
Query: 326 KLGEGGFGDIYKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
K+GEG G + T+++ GK+VAVKK+ + +R F NEV ++ + H N++ +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNS 89
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
G EL +V E++ +L + + +N +Q + L + L+ LH +IH
Sbjct: 90 YLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQ---GVIH 143
Query: 445 RDIKPSNVLLDDDLQPKIADFG----LARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLS 500
RDIK ++LL D + K++DFG +++ +P + GT + APE
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPELISRLPYG 198
Query: 501 EKVDAYSFGVLVLEIISG 518
+VD +S G++V+E++ G
Sbjct: 199 PEVDIWSLGIMVIEMVDG 216
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 8/200 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTL-SDFENEVRLISNVHHRNL 378
F + K+GEG +G +YK K G++VA+KK+ + + S E+ L+ ++H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++LL +L LV+E+++ L F+ + + +GLA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEFLS-MDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 125
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
R++HRD+KP N+L++ + K+ADFGLAR + TL Y APE + +
Sbjct: 126 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 499 -LSEKVDAYSFGVLVLEIIS 517
S VD +S G + E+++
Sbjct: 183 YYSTAVDIWSLGCIFAEMVT 202
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 310 RLKDLVSA---TRKFSEENKLGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDFEN 365
+L+ +VS +K++ K+G+G G +Y + G+ VA++++ + + N
Sbjct: 8 KLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK-ELIIN 66
Query: 366 EVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIIL 425
E+ ++ + N++ L G EL +V EY+A SL + ++ Q +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCR 123
Query: 426 GTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGL-ARLLPENQSHLSTKFAG 484
+ L +LH + ++IHRDIK N+LL D K+ DFG A++ PE ++ G
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SEMVG 178
Query: 485 TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
T + APE KVD +S G++ +E+I G
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 26/229 (11%)
Query: 310 RLKDLVSATRKFSEENKLGEGGFGDIYKGTL------KNGKIVAVKKLAIGISRRTLSDF 363
+LK++ + +F EE LGE FG +YKG L + + VA+K L +F
Sbjct: 2 KLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF 59
Query: 364 ENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEK------------ 411
+E L + + H N++ LLG ++ L +++ Y ++ L +FL
Sbjct: 60 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 119
Query: 412 --RGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLAR 469
+ +L ++ A G+ YL ++H+D+ NVL+ D L KI+D GL R
Sbjct: 120 TVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFR 176
Query: 470 -LLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS 517
+ + L + + APE ++G+ S D +S+GV++ E+ S
Sbjct: 177 EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 125/271 (46%), Gaps = 30/271 (11%)
Query: 327 LGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRL 381
LG G FG +YKG +N KI VA+K L S + + +E +++ V + RL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
LG C + LV + M L + E RG L + + + A+G++YL + VR
Sbjct: 85 LGICLTS-TVQLVTQLMPYGCLLDHV-RENRGRLGSQDLLNWCMQIAKGMSYLED---VR 139
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGT-LGYTAPEYAIHGQLS 500
++HRD+ NVL+ KI DFGLARLL +++ + + A E + + +
Sbjct: 140 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFT 199
Query: 501 EKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDESLDPNEC 558
+ D +S+GV V E+++ G K + E LL++ RL + P C
Sbjct: 200 HQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQ-------------PPIC 246
Query: 559 TKEAAEKVVEIALMCTQSAANSRPTMSEVVA 589
T + V I + C + RP E+V+
Sbjct: 247 TID----VYMIMVKCWMIDSECRPRFRELVS 273
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 103/198 (52%), Gaps = 17/198 (8%)
Query: 326 KLGEGGFGDIYKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
K+GEG G + T+++ GK+VAVKK+ + +R F NEV ++ + H N++ +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNS 139
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
G EL +V E++ +L + + +N +Q + L + L+ LH +IH
Sbjct: 140 YLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG---VIH 193
Query: 445 RDIKPSNVLLDDDLQPKIADFG----LARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLS 500
RDIK ++LL D + K++DFG +++ +P + GT + APE
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPELISRLPYG 248
Query: 501 EKVDAYSFGVLVLEIISG 518
+VD +S G++V+E++ G
Sbjct: 249 PEVDIWSLGIMVIEMVDG 266
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 104/222 (46%), Gaps = 26/222 (11%)
Query: 330 GGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCCSQGP 389
G FG ++K L N VAVK + + S E E+ + H NL++ + +G
Sbjct: 26 GRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQS--EREIFSTPGMKHENLLQFIAAEKRGS 82
Query: 390 ----ELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF------- 438
EL L+ + SL +L G + W + + +RGL+YLHED
Sbjct: 83 NLEVELWLITAFHDKGSLTDYLKG---NIITWNELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 439 -HVRIIHRDIKPSNVLLDDDLQPKIADFGLA-RLLPENQSHLSTKFAGTLGYTAPEY--- 493
I HRD K NVLL DL +ADFGLA R P + GT Y APE
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEG 199
Query: 494 AIHGQLSE--KVDAYSFGVLVLEIISGTKSSETKGEEGEYLL 533
AI+ Q ++D Y+ G+++ E++S K+++ G EY+L
Sbjct: 200 AINFQRDAFLRIDMYAMGLVLWELVSRCKAAD--GPVDEYML 239
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 14/214 (6%)
Query: 310 RLKDLVSA---TRKFSEENKLGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDFEN 365
+L+ +VS +K++ K+G+G G +Y + G+ VA++++ + + N
Sbjct: 8 KLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK-ELIIN 66
Query: 366 EVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIIL 425
E+ ++ + N++ L G EL +V EY+A SL + ++ Q +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCR 123
Query: 426 GTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGL-ARLLPENQSHLSTKFAG 484
+ L +LH + ++IHRDIK N+LL D K+ DFG A++ PE + G
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVG 178
Query: 485 TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
T + APE KVD +S G++ +E+I G
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 14/214 (6%)
Query: 310 RLKDLVSA---TRKFSEENKLGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDFEN 365
+L+ +VS +K++ K+G+G G +Y + G+ VA++++ + + N
Sbjct: 9 KLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK-ELIIN 67
Query: 366 EVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIIL 425
E+ ++ + N++ L G EL +V EY+A SL + ++ Q +
Sbjct: 68 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCR 124
Query: 426 GTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGL-ARLLPENQSHLSTKFAG 484
+ L +LH + ++IHRDIK N+LL D K+ DFG A++ PE + G
Sbjct: 125 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVG 179
Query: 485 TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
T + APE KVD +S G++ +E+I G
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 80 NPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 137
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFGLA+LL E + + + + + A E
Sbjct: 138 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 194
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 195 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 244
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I + C A+SRP E++
Sbjct: 245 ---PPICTID----VYMIMVKCWMIDADSRPKFRELI 274
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 77 NPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 134
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFGLA+LL E + + + + + A E
Sbjct: 135 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 191
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 192 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 241
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I + C A+SRP E++
Sbjct: 242 ---PPICTID----VYMIMVKCWMIDADSRPKFRELI 271
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 77 NPHVCRLLGICLTS-TVQLIMQLMPFGXLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 134
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFGLA+LL E + + + + + A E
Sbjct: 135 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 191
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 192 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 241
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I + C A+SRP E++
Sbjct: 242 ---PPICTID----VYMIMVKCWMIDADSRPKFRELI 271
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 78 NPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFGLA+LL E + + + + + A E
Sbjct: 136 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 242
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I + C A+SRP E++
Sbjct: 243 ---PPICTID----VYMIMVKCWMIDADSRPKFRELI 272
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 27/213 (12%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
F E +G GGFG ++K + +GK +K++ + E EV+ ++ + H N++
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA-----EREVKALAKLDHVNIV 67
Query: 380 RLLGCCS---QGPE-------------LILVYEYMANSSLDKFLFGEKRGSLNWKQRFDI 423
GC PE L + E+ +L++++ + L+ ++
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALEL 127
Query: 424 ILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA 483
+G+ Y+H ++I+RD+KPSN+ L D Q KI DFGL L + +K
Sbjct: 128 FEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK-- 182
Query: 484 GTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEII 516
GTL Y +PE ++VD Y+ G+++ E++
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 79 NPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFGLA+LL E + + + + + A E
Sbjct: 137 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 243
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I + C A+SRP E++
Sbjct: 244 ---PPICTID----VYMIMVKCWMIDADSRPKFRELI 273
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 76 NPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFGLA+LL E + + + + + A E
Sbjct: 134 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 240
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I + C A+SRP E++
Sbjct: 241 ---PPICTID----VYMIMVKCWMIDADSRPKFRELI 270
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 98/223 (43%), Gaps = 19/223 (8%)
Query: 311 LKDLVSATRK-FSEENKLGEGGFGDIYKGTL------KNGKIVAVKKLAIGISRRTLSDF 363
+ DL RK + LG G FG++Y+G + + VAVK L S + DF
Sbjct: 22 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 81
Query: 364 ENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWK 418
E +IS ++H+N++R +G Q ++ E MA L FL + SL
Sbjct: 82 LMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 419 QRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLD---DDLQPKIADFGLARLLPENQ 475
+ A G YL E+ IHRDI N LL KI DFG+AR +
Sbjct: 142 DLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS 198
Query: 476 SHLSTKFAG-TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS 517
+ A + + PE + G + K D +SFGVL+ EI S
Sbjct: 199 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 98/223 (43%), Gaps = 19/223 (8%)
Query: 311 LKDLVSATRK-FSEENKLGEGGFGDIYKGTL------KNGKIVAVKKLAIGISRRTLSDF 363
+ DL RK + LG G FG++Y+G + + VAVK L S + DF
Sbjct: 36 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 95
Query: 364 ENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWK 418
E +IS ++H+N++R +G Q ++ E MA L FL + SL
Sbjct: 96 LMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 155
Query: 419 QRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLL---DDDLQPKIADFGLARLLPENQ 475
+ A G YL E+ IHRDI N LL KI DFG+AR +
Sbjct: 156 DLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS 212
Query: 476 SHLSTKFAG-TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS 517
+ A + + PE + G + K D +SFGVL+ EI S
Sbjct: 213 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 113/270 (41%), Gaps = 35/270 (12%)
Query: 326 KLGEGGFGDIYKGTL--KNGKIV--AVKKLAIGI--SRRTLSDFENEVRLISNVHHRNLI 379
KLG+G FG + +G +GK V AVK L + + DF EV + ++ HRNLI
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
RL G P ++ S LD+ + L R+ + A G+ YL
Sbjct: 79 RLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 134
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPEN------QSHLSTKFAGTLGYTAPEY 493
R IHRD+ N+LL KI DFGL R LP+N Q H FA + APE
Sbjct: 135 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA----WCAPES 189
Query: 494 AIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESL 553
S D + FGV + E+ T G+E L + L++ E +
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMF-------TYGQEPWIGLNGSQILHKIDKEGERLPR-- 240
Query: 554 DPNECTKEAAEKVVEIALMCTQSAANSRPT 583
P +C ++ + + + C RPT
Sbjct: 241 -PEDCPQD----IYNVMVQCWAHKPEDRPT 265
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 79 NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFGLA+LL E + + + + + A E
Sbjct: 137 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 243
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I + C A+SRP E++
Sbjct: 244 ---PPICTID----VYMIMVKCWMIDADSRPKFRELI 273
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 20/245 (8%)
Query: 319 RKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLAI-----GISRRTLSDFENEVRLISN 372
+K+ + K+GEG +G ++K + +IVA+K++ + G+ L E+ L+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSAL----REICLLKE 57
Query: 373 VHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLA 432
+ H+N++RL +L LV+E+ + L K+ F G L+ + + +GL
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEF-CDQDLKKY-FDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 433 YLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPE 492
+ H ++HRD+KP N+L++ + + K+ADFGLAR S + TL Y P+
Sbjct: 116 FCHSR---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPD 171
Query: 493 YAIHGQL-SEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGT--HWELM 549
+L S +D +S G + E+ + + G + + LKR +RL T W M
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAARPL-FPGNDVDDQLKRIFRLLGTPTEEQWPSM 230
Query: 550 DESLD 554
+ D
Sbjct: 231 TKLPD 235
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 79 NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFGLA+LL E + + + + + A E
Sbjct: 137 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 243
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I + C A+SRP E++
Sbjct: 244 ---PPICTID----VYMIMVKCWMIDADSRPKFRELI 273
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 78 NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFGLA+LL E + + + + + A E
Sbjct: 136 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 242
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I + C A+SRP E++
Sbjct: 243 ---PPICTID----VYMIMVKCWMIDADSRPKFRELI 272
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 96/223 (43%), Gaps = 19/223 (8%)
Query: 311 LKDLVSATRK-FSEENKLGEGGFGDIYKGTLKNGK------IVAVKKLAIGISRRTLSDF 363
+ DL RK + LG G FG++Y+G + VAVK L S + DF
Sbjct: 36 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 95
Query: 364 ENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWK 418
E +IS +H+N++R +G Q ++ E MA L FL + SL
Sbjct: 96 LMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML 155
Query: 419 QRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLL---DDDLQPKIADFGLARLLPENQ 475
+ A G YL E+ IHRDI N LL KI DFG+AR +
Sbjct: 156 DLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS 212
Query: 476 SHLSTKFAG-TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS 517
+ A + + PE + G + K D +SFGVL+ EI S
Sbjct: 213 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 70 NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 127
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFGLA+LL E + + + + + A E
Sbjct: 128 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 184
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 185 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 234
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I + C A+SRP E++
Sbjct: 235 ---PPICTID----VYMIMVKCWMIDADSRPKFRELI 264
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 101 NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 158
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFGLA+LL E + + + + + A E
Sbjct: 159 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 215
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 216 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 265
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I + C A+SRP E++
Sbjct: 266 ---PPICTID----VYMIMVKCWMIDADSRPKFRELI 295
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 83 NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFGLA+LL E + + + + + A E
Sbjct: 141 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 247
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I + C A+SRP E++
Sbjct: 248 ---PPICTID----VYMIMVKCWMIDADSRPKFRELI 277
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 76 NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFGLA+LL E + + + + + A E
Sbjct: 134 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 240
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I + C A+SRP E++
Sbjct: 241 ---PPICTID----VYMIMVKCWMIDADSRPKFRELI 270
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 76 NPHVCRLLGICLTS-TVQLITQLMPFGXLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFGLA+LL E + + + + + A E
Sbjct: 134 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 240
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I + C A+SRP E++
Sbjct: 241 ---PPICTID----VYMIMVKCWMIDADSRPKFRELI 270
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 113/271 (41%), Gaps = 35/271 (12%)
Query: 325 NKLGEGGFGDIYKGTL--KNGKIV--AVKKLAIGI--SRRTLSDFENEVRLISNVHHRNL 378
KLG+G FG + +G +GK V AVK L + + DF EV + ++ HRNL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
IRL G P ++ S LD+ + L R+ + A G+ YL
Sbjct: 84 IRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 140
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPEN------QSHLSTKFAGTLGYTAPE 492
R IHRD+ N+LL KI DFGL R LP+N Q H FA + APE
Sbjct: 141 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA----WCAPE 194
Query: 493 YAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDES 552
S D + FGV + E+ T G+E L + L++ E +
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMF-------TYGQEPWIGLNGSQILHKIDKEGERLPR- 246
Query: 553 LDPNECTKEAAEKVVEIALMCTQSAANSRPT 583
P +C ++ + + + C RPT
Sbjct: 247 --PEDCPQD----IYNVMVQCWAHKPEDRPT 271
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 82 NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 139
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFGLA+LL E + + + + + A E
Sbjct: 140 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 196
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 197 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 246
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I + C A+SRP E++
Sbjct: 247 ---PPICTID----VYMIMVKCWMIDADSRPKFRELI 276
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 311 LKDLVSATRK-FSEENKLGEGGFGDIYKGTL------KNGKIVAVKKLAIGISRRTLSDF 363
+ DL RK + LG G FG++Y+G + + VAVK L S + DF
Sbjct: 21 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 80
Query: 364 ENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWK 418
E +IS +H+N++R +G Q ++ E MA L FL + SL
Sbjct: 81 LMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML 140
Query: 419 QRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLD---DDLQPKIADFGLARLLPENQ 475
+ A G YL E+ IHRDI N LL KI DFG+AR +
Sbjct: 141 DLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS 197
Query: 476 SHLSTKFAG-TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS 517
+ A + + PE + G + K D +SFGVL+ EI S
Sbjct: 198 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 311 LKDLVSATRK-FSEENKLGEGGFGDIYKGTL------KNGKIVAVKKLAIGISRRTLSDF 363
+ DL RK + LG G FG++Y+G + + VAVK L S + DF
Sbjct: 21 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 80
Query: 364 ENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWK 418
E +IS +H+N++R +G Q ++ E MA L FL + SL
Sbjct: 81 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 140
Query: 419 QRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLD---DDLQPKIADFGLARLLPENQ 475
+ A G YL E+ IHRDI N LL KI DFG+AR +
Sbjct: 141 DLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS 197
Query: 476 SHLSTKFAG-TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS 517
+ A + + PE + G + K D +SFGVL+ EI S
Sbjct: 198 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 113/271 (41%), Gaps = 35/271 (12%)
Query: 325 NKLGEGGFGDIYKGTL--KNGKIV--AVKKLAIGI--SRRTLSDFENEVRLISNVHHRNL 378
KLG+G FG + +G +GK V AVK L + + DF EV + ++ HRNL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
IRL G P ++ S LD+ + L R+ + A G+ YL
Sbjct: 84 IRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 140
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPEN------QSHLSTKFAGTLGYTAPE 492
R IHRD+ N+LL KI DFGL R LP+N Q H FA + APE
Sbjct: 141 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA----WCAPE 194
Query: 493 YAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDES 552
S D + FGV + E+ T G+E L + L++ E +
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMF-------TYGQEPWIGLNGSQILHKIDKEGERLPR- 246
Query: 553 LDPNECTKEAAEKVVEIALMCTQSAANSRPT 583
P +C ++ + + + C RPT
Sbjct: 247 --PEDCPQD----IYNVMVQCWAHKPEDRPT 271
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 22/227 (9%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKN-GKIVAVKKLAIGISRRTLSDFE-NEVRLISNVHHRN 377
K+ + K+GEG +G ++K ++ G+IVA+KK + E+R++ + H N
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 378 LIRLLGCCSQGPELILVYEYMANS---SLDKFLFGEKRG---SLNWKQRFDIILGTARGL 431
L+ LL + L LV+EY ++ LD++ G S+ W+ T + +
Sbjct: 64 LVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ--------TLQAV 115
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAP 491
+ H+ IHRD+KP N+L+ K+ DFG ARLL + + A T Y +P
Sbjct: 116 NFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA-TRWYRSP 171
Query: 492 EYAI-HGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGE-YLLKRA 536
E + Q VD ++ G + E++SG K + + YL+++
Sbjct: 172 ELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKT 218
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 107/214 (50%), Gaps = 14/214 (6%)
Query: 310 RLKDLVSA---TRKFSEENKLGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDFEN 365
+L+ +VS +K++ K+G+G G +Y + G+ VA++++ + + N
Sbjct: 9 KLRIIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK-ELIIN 67
Query: 366 EVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIIL 425
E+ ++ + N++ L G EL +V EY+A SL + ++ Q +
Sbjct: 68 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCR 124
Query: 426 GTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGL-ARLLPENQSHLSTKFAG 484
+ L +LH + ++IHR+IK N+LL D K+ DFG A++ PE QS ST G
Sbjct: 125 ECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPE-QSKRST-MVG 179
Query: 485 TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
T + APE KVD +S G++ +E+I G
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 13/200 (6%)
Query: 325 NKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRR--TLSDFENEVRLISNVHHRNLIRL 381
+ LG G FG + G + G VAVK L R + E++ + H ++I+L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
S ++ +V EY++ L F + K G L+ K+ + G+ Y H
Sbjct: 82 YQVISTPSDIFMVMEYVSGGEL--FDYICKNGRLDEKESRRLFQQILSGVDYCHRHM--- 136
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL-- 499
++HRD+KP NVLLD + KIADFGL+ ++ + + G+ Y APE I G+L
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRXSCGSPNYAAPE-VISGRLYA 193
Query: 500 SEKVDAYSFGVLVLEIISGT 519
+VD +S GV++ ++ GT
Sbjct: 194 GPEVDIWSSGVILYALLCGT 213
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 96/223 (43%), Gaps = 19/223 (8%)
Query: 311 LKDLVSATRK-FSEENKLGEGGFGDIYKGTLKNGK------IVAVKKLAIGISRRTLSDF 363
+ DL RK + LG G FG++Y+G + VAVK L S + DF
Sbjct: 13 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 72
Query: 364 ENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWK 418
E +IS +H+N++R +G Q ++ E MA L FL + SL
Sbjct: 73 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 132
Query: 419 QRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLL---DDDLQPKIADFGLARLLPENQ 475
+ A G YL E+ IHRDI N LL KI DFG+AR +
Sbjct: 133 DLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS 189
Query: 476 SHLSTKFAG-TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS 517
+ A + + PE + G + K D +SFGVL+ EI S
Sbjct: 190 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 26/197 (13%)
Query: 327 LGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSD------FENEVRLISNVHHRN 377
LGEG FG + Y T G+ VA+K I+++ L+ E E+ + + H +
Sbjct: 22 LGEGSFGKVKLAYHTT--TGQKVALKI----INKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 378 LIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHED 437
+I+L E+I+V EY N D + +K ++ F I+ + Y H
Sbjct: 76 IIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIIS---AVEYCHRH 132
Query: 438 FHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHG 497
+I+HRD+KP N+LLD+ L KIADFGL+ ++ + + L T G+ Y APE I G
Sbjct: 133 ---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NFLKTS-CGSPNYAAPE-VISG 186
Query: 498 QL--SEKVDAYSFGVLV 512
+L +VD +S GV++
Sbjct: 187 KLYAGPEVDVWSCGVIL 203
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 113/270 (41%), Gaps = 35/270 (12%)
Query: 326 KLGEGGFGDIYKGTL--KNGKIV--AVKKLAIGI--SRRTLSDFENEVRLISNVHHRNLI 379
KLG+G FG + +G +GK V AVK L + + DF EV + ++ HRNLI
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
RL G P ++ S LD+ + L R+ + A G+ YL
Sbjct: 75 RLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 130
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPEN------QSHLSTKFAGTLGYTAPEY 493
R IHRD+ N+LL KI DFGL R LP+N Q H FA + APE
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA----WCAPES 185
Query: 494 AIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESL 553
S D + FGV + E+ T G+E L + L++ E +
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMF-------TYGQEPWIGLNGSQILHKIDKEGERLPR-- 236
Query: 554 DPNECTKEAAEKVVEIALMCTQSAANSRPT 583
P +C ++ + + + C RPT
Sbjct: 237 -PEDCPQD----IYNVMVQCWAHKPEDRPT 261
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 311 LKDLVSATRK-FSEENKLGEGGFGDIYKGTL------KNGKIVAVKKLAIGISRRTLSDF 363
+ DL RK + LG G FG++Y+G + + VAVK L S + DF
Sbjct: 38 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 97
Query: 364 ENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWK 418
E +IS +H+N++R +G Q ++ E MA L FL + SL
Sbjct: 98 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 157
Query: 419 QRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLD---DDLQPKIADFGLARLLPENQ 475
+ A G YL E+ IHRDI N LL KI DFG+AR +
Sbjct: 158 DLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS 214
Query: 476 SHLSTKFAG-TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS 517
+ A + + PE + G + K D +SFGVL+ EI S
Sbjct: 215 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 129/284 (45%), Gaps = 36/284 (12%)
Query: 327 LGEGGFGDIYK----GTLKNG--KIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
LG G FG + + G K + VAVK L G + +E++++ ++ HH N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 380 RLLGCCSQ-GPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILG----------TA 428
LLG C++ G L+++ E+ +L +L ++ + +K + L A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG-TLG 487
+G+ +L + IHRD+ N+LL + KI DFGLAR + ++ ++ A L
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 488 YTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWE 547
+ APE + + D +SFGVL+ EI S S + E +R + GT
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL----KEGTRMR 267
Query: 548 LMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P+ T E + +++ C + RPT SE+V L
Sbjct: 268 A------PDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 301
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 113/270 (41%), Gaps = 35/270 (12%)
Query: 326 KLGEGGFGDIYKGTL--KNGKIV--AVKKLAIGI--SRRTLSDFENEVRLISNVHHRNLI 379
KLG+G FG + +G +GK V AVK L + + DF EV + ++ HRNLI
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
RL G P ++ S LD+ + L R+ + A G+ YL
Sbjct: 79 RLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 134
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPEN------QSHLSTKFAGTLGYTAPEY 493
R IHRD+ N+LL KI DFGL R LP+N Q H FA + APE
Sbjct: 135 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA----WCAPES 189
Query: 494 AIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESL 553
S D + FGV + E+ T G+E L + L++ E +
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMF-------TYGQEPWIGLNGSQILHKIDKEGERLPR-- 240
Query: 554 DPNECTKEAAEKVVEIALMCTQSAANSRPT 583
P +C ++ + + + C RPT
Sbjct: 241 -PEDCPQD----IYNVMVQCWAHKPEDRPT 265
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 26/197 (13%)
Query: 327 LGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSD------FENEVRLISNVHHRN 377
LGEG FG + Y T G+ VA+K I+++ L+ E E+ + + H +
Sbjct: 21 LGEGSFGKVKLAYHTT--TGQKVALKI----INKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 378 LIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHED 437
+I+L E+I+V EY N D + +K ++ F I+ + Y H
Sbjct: 75 IIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIIS---AVEYCHRH 131
Query: 438 FHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHG 497
+I+HRD+KP N+LLD+ L KIADFGL+ ++ + + L T G+ Y APE I G
Sbjct: 132 ---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NFLKTS-CGSPNYAAPE-VISG 185
Query: 498 QL--SEKVDAYSFGVLV 512
+L +VD +S GV++
Sbjct: 186 KLYAGPEVDVWSCGVIL 202
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 311 LKDLVSATRK-FSEENKLGEGGFGDIYKGTL------KNGKIVAVKKLAIGISRRTLSDF 363
+ DL RK + LG G FG++Y+G + + VAVK L S + DF
Sbjct: 22 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 81
Query: 364 ENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWK 418
E +IS +H+N++R +G Q ++ E MA L FL + SL
Sbjct: 82 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 419 QRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLD---DDLQPKIADFGLARLLPENQ 475
+ A G YL E+ IHRDI N LL KI DFG+AR +
Sbjct: 142 DLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS 198
Query: 476 SHLSTKFAG-TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS 517
+ A + + PE + G + K D +SFGVL+ EI S
Sbjct: 199 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 311 LKDLVSATRK-FSEENKLGEGGFGDIYKGTL------KNGKIVAVKKLAIGISRRTLSDF 363
+ DL RK + LG G FG++Y+G + + VAVK L S + DF
Sbjct: 28 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 87
Query: 364 ENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWK 418
E +IS +H+N++R +G Q ++ E MA L FL + SL
Sbjct: 88 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 147
Query: 419 QRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLD---DDLQPKIADFGLARLLPENQ 475
+ A G YL E+ IHRDI N LL KI DFG+AR +
Sbjct: 148 DLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS 204
Query: 476 SHLSTKFAG-TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS 517
+ A + + PE + G + K D +SFGVL+ EI S
Sbjct: 205 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 311 LKDLVSATRK-FSEENKLGEGGFGDIYKGTL------KNGKIVAVKKLAIGISRRTLSDF 363
+ DL RK + LG G FG++Y+G + + VAVK L S + DF
Sbjct: 36 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDF 95
Query: 364 ENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWK 418
E +IS +H+N++R +G Q ++ E MA L FL + SL
Sbjct: 96 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 155
Query: 419 QRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLL---DDDLQPKIADFGLARLLPENQ 475
+ A G YL E+ IHRDI N LL KI DFG+AR +
Sbjct: 156 DLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS 212
Query: 476 SHLSTKFAG-TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS 517
+ A + + PE + G + K D +SFGVL+ EI S
Sbjct: 213 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 113/270 (41%), Gaps = 35/270 (12%)
Query: 326 KLGEGGFGDIYKGTL--KNGKIV--AVKKLAIGI--SRRTLSDFENEVRLISNVHHRNLI 379
KLG+G FG + +G +GK V AVK L + + DF EV + ++ HRNLI
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
RL G P ++ S LD+ + L R+ + A G+ YL
Sbjct: 75 RLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 130
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPEN------QSHLSTKFAGTLGYTAPEY 493
R IHRD+ N+LL KI DFGL R LP+N Q H FA + APE
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA----WCAPES 185
Query: 494 AIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESL 553
S D + FGV + E+ T G+E L + L++ E +
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMF-------TYGQEPWIGLNGSQILHKIDKEGERLPR-- 236
Query: 554 DPNECTKEAAEKVVEIALMCTQSAANSRPT 583
P +C ++ + + + C RPT
Sbjct: 237 -PEDCPQD----IYNVMVQCWAHKPEDRPT 261
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 135/306 (44%), Gaps = 37/306 (12%)
Query: 310 RLKDLVSATRKFSEENKLGEGGFGDIYKGTLKN----GKIVAVKKLAI-GISRRTLSDFE 364
+L+D+V LGEG FG + +G LK VAVK + + S+R + +F
Sbjct: 25 KLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFL 84
Query: 365 NEVRLISNVHHRNLIRLLGCC----SQG-PELILVYEYMANSSLDKFLF------GEKRG 413
+E + + H N+IRLLG C SQG P+ +++ +M L +L G K
Sbjct: 85 SEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHI 144
Query: 414 SLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPE 473
L +F ++ A G+ YL + +HRD+ N +L DD+ +ADFGL++ +
Sbjct: 145 PLQTLLKF--MVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYS 199
Query: 474 NQSHLSTKFAGT-LGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYL 532
+ + A + + A E + K D ++FGV + EI + + + E
Sbjct: 200 GDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE-- 257
Query: 533 LKRAWRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLK 592
+Y+ H + + P +C E + EI C ++ RPT S + L+
Sbjct: 258 ------MYDYLLHGHRLKQ---PEDCLDE----LYEIMYSCWRTDPLDRPTFSVLRLQLE 304
Query: 593 STSSSL 598
SL
Sbjct: 305 KLLESL 310
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 311 LKDLVSATRK-FSEENKLGEGGFGDIYKGTL------KNGKIVAVKKLAIGISRRTLSDF 363
+ DL RK + LG G FG++Y+G + + VAVK L S + DF
Sbjct: 48 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 107
Query: 364 ENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWK 418
E +IS +H+N++R +G Q ++ E MA L FL + SL
Sbjct: 108 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 167
Query: 419 QRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLD---DDLQPKIADFGLARLLPENQ 475
+ A G YL E+ IHRDI N LL KI DFG+AR +
Sbjct: 168 DLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS 224
Query: 476 SHLSTKFAG-TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS 517
+ A + + PE + G + K D +SFGVL+ EI S
Sbjct: 225 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 37/289 (12%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDFE-----NEVRLISNV-HHRNLI 379
LG G FG + + T GK AV K+A+ + + T E +E++++S++ H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFL------------FGEKRGSLNWKQRFDIILGT 427
LLG C+ G ++++ EY L FL F +L+ +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 428 ARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG-TL 486
A+G+A+L IHRD+ NVLL + KI DFGLAR + + +++ A +
Sbjct: 174 AQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 487 GYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHW 546
+ APE + + D +S+G+L+ EI S + G + + ++L ++G +
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP----GILVNSKFYKLVKDG--Y 284
Query: 547 ELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTS 595
++ + P + + I C RPT ++ + L+ +
Sbjct: 285 QMAQPAFAP--------KNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 66 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 117
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 118 KXQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARH 174
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 26/197 (13%)
Query: 327 LGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSD------FENEVRLISNVHHRN 377
LGEG FG + Y T G+ VA+K I+++ L+ E E+ + + H +
Sbjct: 12 LGEGSFGKVKLAYHTT--TGQKVALKI----INKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 378 LIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHED 437
+I+L E+I+V EY N D + +K ++ F I+ + Y H
Sbjct: 66 IIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIIS---AVEYCHRH 122
Query: 438 FHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHG 497
+I+HRD+KP N+LLD+ L KIADFGL+ ++ + + L T G+ Y APE I G
Sbjct: 123 ---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NFLKTS-CGSPNYAAPE-VISG 176
Query: 498 QL--SEKVDAYSFGVLV 512
+L +VD +S GV++
Sbjct: 177 KLYAGPEVDVWSCGVIL 193
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 311 LKDLVSATRK-FSEENKLGEGGFGDIYKGTL------KNGKIVAVKKLAIGISRRTLSDF 363
+ DL RK + LG G FG++Y+G + + VAVK L S + DF
Sbjct: 62 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 121
Query: 364 ENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWK 418
E +IS +H+N++R +G Q ++ E MA L FL + SL
Sbjct: 122 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 181
Query: 419 QRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLD---DDLQPKIADFGLARLLPENQ 475
+ A G YL E+ IHRDI N LL KI DFG+AR +
Sbjct: 182 DLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAG 238
Query: 476 SHLSTKFAG-TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS 517
+ A + + PE + G + K D +SFGVL+ EI S
Sbjct: 239 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 113/270 (41%), Gaps = 35/270 (12%)
Query: 326 KLGEGGFGDIYKGTL--KNGKIV--AVKKLAIGI--SRRTLSDFENEVRLISNVHHRNLI 379
KLG+G FG + +G +GK V AVK L + + DF EV + ++ HRNLI
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
RL G P ++ S LD+ + L R+ + A G+ YL
Sbjct: 75 RLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK-- 130
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPEN------QSHLSTKFAGTLGYTAPEY 493
R IHRD+ N+LL KI DFGL R LP+N Q H FA + APE
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA----WCAPES 185
Query: 494 AIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESL 553
S D + FGV + E+ T G+E L + L++ E +
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMF-------TYGQEPWIGLNGSQILHKIDKEGERLPR-- 236
Query: 554 DPNECTKEAAEKVVEIALMCTQSAANSRPT 583
P +C ++ + + + C RPT
Sbjct: 237 -PEDCPQD----IYNVMVQCWAHKPEDRPT 261
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 66 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 117
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 118 KXQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 96/223 (43%), Gaps = 19/223 (8%)
Query: 311 LKDLVSATRK-FSEENKLGEGGFGDIYKGTLKNGK------IVAVKKLAIGISRRTLSDF 363
+ DL RK + LG G FG++Y+G + VAVK L S + DF
Sbjct: 39 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 98
Query: 364 ENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWK 418
E +IS +H+N++R +G Q ++ E MA L FL + SL
Sbjct: 99 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 158
Query: 419 QRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLL---DDDLQPKIADFGLARLLPENQ 475
+ A G YL E+ IHRDI N LL KI DFG+AR +
Sbjct: 159 DLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAG 215
Query: 476 SHLSTKFAG-TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS 517
+ A + + PE + G + K D +SFGVL+ EI S
Sbjct: 216 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 129/284 (45%), Gaps = 36/284 (12%)
Query: 327 LGEGGFGDIYK----GTLKNG--KIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
LG G FG + + G K + VAVK L G + +E++++ ++ HH N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 380 RLLGCCSQ-GPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILG----------TA 428
LLG C++ G L+++ E+ +L +L ++ + +K + L A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG-TLG 487
+G+ +L + IHRD+ N+LL + KI DFGLAR + ++ ++ A L
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 488 YTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWE 547
+ APE + + D +SFGVL+ EI S S + E +R + GT
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRL----KEGTRMR 267
Query: 548 LMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P+ T E + +++ C + RPT SE+V L
Sbjct: 268 A------PDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 301
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 26/197 (13%)
Query: 327 LGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSD------FENEVRLISNVHHRN 377
LGEG FG + Y T G+ VA+K I+++ L+ E E+ + + H +
Sbjct: 16 LGEGSFGKVKLAYHTT--TGQKVALKI----INKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 378 LIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHED 437
+I+L E+I+V EY N D + +K ++ F I+ Y H
Sbjct: 70 IIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVE---YCHRH 126
Query: 438 FHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHG 497
+I+HRD+KP N+LLD+ L KIADFGL+ ++ + + L T G+ Y APE I G
Sbjct: 127 ---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NFLKTS-CGSPNYAAPE-VISG 180
Query: 498 QL--SEKVDAYSFGVLV 512
+L +VD +S GV++
Sbjct: 181 KLYAGPEVDVWSCGVIL 197
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 65
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 66 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 117
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 31/231 (13%)
Query: 304 QGPVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IG 354
+ P YR K + ++ + +G G +G + +K+G +AVKKL+ I
Sbjct: 33 ERPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSII 92
Query: 355 ISRRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGS 414
++RT E+RL+ ++ H N+I LL + L E + L L G +
Sbjct: 93 HAKRTY----RELRLLKHMKHENVIGLLDVFTPATSL----EEFNDVYLVTHLMGADLNN 144
Query: 415 LNWKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLA 468
+ Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLA
Sbjct: 145 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 201
Query: 469 RLLPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
R + T + T Y APE ++ + VD +S G ++ E+++G
Sbjct: 202 RHTDDEM----TGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTG 248
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 66 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 117
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 65
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 66 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 117
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ + F T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 175 TDDEMA----GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 132/277 (47%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 86 NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 143
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFGLA+LL E + + + + + A E
Sbjct: 144 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 200
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 201 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 250
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I C A+SRP E++
Sbjct: 251 ---PPICTID----VYMIMRKCWMIDADSRPKFRELI 280
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 73 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 124
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR- 180
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ + T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 181 ---HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 62 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 113
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 171 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 132/277 (47%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A G+ YL
Sbjct: 73 NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAEGMNYL 130
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFGLA+LL E + + + + + A E
Sbjct: 131 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 187
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 188 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 237
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I + C A+SRP E++
Sbjct: 238 ---PPICTID----VYMIMVKCWMIDADSRPKFRELI 267
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 70
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 71 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 122
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARH 179
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 180 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 65
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 66 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 117
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ + F T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 175 TDDEMA----GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 26 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 85
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 86 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 137
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 138 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 194
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 195 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 137/301 (45%), Gaps = 36/301 (11%)
Query: 314 LVSATRKFSEENK-LGEGGFGDIYKGTL----KNGKIVAVKKLAIGISRRTLSDFENEVR 368
L+ R + ++ +G+G FG +Y G +N A+K L+ + + F E
Sbjct: 15 LIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGL 74
Query: 369 LISNVHHRNLIRLLGCC--SQG-PELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIIL 425
L+ ++H N++ L+G +G P ++L YM + L +F+ +R K L
Sbjct: 75 LMRGLNHPNVLALIGIMLPPEGLPHVLL--PYMCHGDLLQFIRSPQRNP-TVKDLISFGL 131
Query: 426 GTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPEN-----QSHLST 480
ARG+ YL E + +HRD+ N +LD+ K+ADFGLAR + + Q H
Sbjct: 132 QVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHA 188
Query: 481 KFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLY 540
+ + +TA E + + K D +SFGVL+ E++ T+ + + L
Sbjct: 189 RLP--VKWTALESLQTYRFTTKSDVWSFGVLLWELL--TRGAPPYRHIDPFDL------- 237
Query: 541 ENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSSSLLG 600
TH+ L E ++ +V++ C ++ RPT +V ++ S+LLG
Sbjct: 238 ---THFLAQGRRLPQPEYCPDSLYQVMQ---QCWEADPAVRPTFRVLVGEVEQIVSALLG 291
Query: 601 N 601
+
Sbjct: 292 D 292
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 73 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 124
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR- 180
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ + T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 181 ---HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 71
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 72 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 123
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 180
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 181 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 132/277 (47%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 79 NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFGLA+LL E + + + + + A E
Sbjct: 137 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 243
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I C A+SRP E++
Sbjct: 244 ---PPICTID----VYMIMRKCWMIDADSRPKFRELI 273
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 40/226 (17%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
F E +G GGFG ++K + +GK ++++ + E EV+ ++ + H N++
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA-----EREVKALAKLDHVNIV 68
Query: 380 RLLGC-----------------CSQGPE------------LILVYEYMANSSLDKFLFGE 410
GC PE L + E+ +L++++
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 411 KRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
+ L+ ++ +G+ Y+H ++IHRD+KPSN+ L D Q KI DFGL
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTS 185
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEII 516
L + T+ GTL Y +PE ++VD Y+ G+++ E++
Sbjct: 186 LKNDGKR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 62 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 113
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ + F T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 171 TDDEMA----GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 25 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 84
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 85 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 136
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 137 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 193
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 194 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 31/243 (12%)
Query: 292 IQRGNISEATELQGPVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVA 347
+ RG+ + P YR K + ++ + +G G +G + K G VA
Sbjct: 15 VPRGSHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA 74
Query: 348 VKKLA-----IGISRRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSS 402
VKKL+ I ++RT E+RL+ ++ H N+I LL + L E +
Sbjct: 75 VKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVY 126
Query: 403 LDKFLFGEKRGSLNWKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDD 456
L L G ++ Q+ +I RGL Y+H IIHRD+KPSN+ +++
Sbjct: 127 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 183
Query: 457 DLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEI 515
D + KI DFGLAR + T + T Y APE ++ ++ VD +S G ++ E+
Sbjct: 184 DCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 239
Query: 516 ISG 518
++G
Sbjct: 240 LTG 242
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 73 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 124
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR- 180
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ + T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 181 ---HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 70
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 71 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 122
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARH 179
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 180 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 13 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 73 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 124
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 181
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 182 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 66 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 117
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 66 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 117
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 15/197 (7%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LG G F +++ + GK+ A+K + + R S ENE+ ++ + H N++ L
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRD-SSLENEIAVLKKIKHENIVTLEDIY 75
Query: 386 SQGPELILVYEYMANSSL-DKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
LV + ++ L D+ L +RG K +I + YLHE+ I+H
Sbjct: 76 ESTTHYYLVMQLVSGGELFDRIL---ERGVYTEKDASLVIQQVLSAVKYLHEN---GIVH 129
Query: 445 RDIKPSNVLL---DDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSE 501
RD+KP N+L +++ + I DFGL+++ Q+ + + GT GY APE S+
Sbjct: 130 RDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEVLAQKPYSK 186
Query: 502 KVDAYSFGVLVLEIISG 518
VD +S GV+ ++ G
Sbjct: 187 AVDCWSIGVITYILLCG 203
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 66 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 117
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 66 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 117
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 29/228 (12%)
Query: 306 PVNYR---LKDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 2 PTFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPEL-----ILVYEYMANSSLDKFLFGEK 411
+RT E+RL+ ++ H N+I LL + L + + ++ + L+ + K
Sbjct: 62 KRTY----RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---K 114
Query: 412 RGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL 471
L +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 115 CAKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT 171
Query: 472 PENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 172 DDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 67
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 68 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 119
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 176
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 177 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 18 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHA 77
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 78 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 129
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 130 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 186
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 187 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 67
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 68 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 119
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 176
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 177 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 132/277 (47%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 76 NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFGLA+LL E + + + + + A E
Sbjct: 134 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 240
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I C A+SRP E++
Sbjct: 241 ---PPICTID----VYMIMRKCWMIDADSRPKFRELI 270
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 18 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 77
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 78 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 129
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 130 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 186
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 187 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 18 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 77
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 78 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 129
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 130 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 186
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 187 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 71
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 72 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 123
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 180
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 181 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 132/277 (47%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 80 NPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 137
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFG A+LL E + + + + + A E
Sbjct: 138 EDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 194
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 195 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 244
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I + C A+SRP E++
Sbjct: 245 ---PPICTID----VYMIMVKCWMIDADSRPKFRELI 274
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 17 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 76
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 77 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 128
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 129 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARH 185
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 186 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 132/277 (47%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + L G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 83 NPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFGLA+LL E + + + + + A E
Sbjct: 141 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 247
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I + C A+SRP E++
Sbjct: 248 ---PPICTID----VYMIMVKCWMIDADSRPKFRELI 277
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 67
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 68 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 119
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 176
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 177 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 66 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 117
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 13/208 (6%)
Query: 317 ATRKFSEEN---KLGE-GGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISN 372
TR + E+ +GE G FG +YK K ++A K+ S L D+ E+ ++++
Sbjct: 4 VTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILAS 63
Query: 373 VHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLA 432
H N+++LL L ++ E+ A ++D + +R L Q + T L
Sbjct: 64 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-PLTESQIQVVCKQTLDALN 122
Query: 433 YLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPE 492
YLH++ +IIHRD+K N+L D K+ADFG++ F GT + APE
Sbjct: 123 YLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPE 179
Query: 493 YAI-----HGQLSEKVDAYSFGVLVLEI 515
+ K D +S G+ ++E+
Sbjct: 180 VVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 70
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 71 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 122
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 179
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 180 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 11 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 70
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 71 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 122
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 179
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 180 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 5 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 64
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 65 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 116
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 117 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 173
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 174 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 218
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ +G G +G + K G VAVKKL+ I +
Sbjct: 16 PTFYRQELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 75
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 76 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 127
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 128 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 184
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 185 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 229
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 66 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 117
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 17 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 76
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 77 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 128
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 129 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 185
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 186 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDFE-----NEVRLISNV-HHRNLI 379
LG G FG + + T GK AV K+A+ + + T E +E++++S++ H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
LLG C+ G ++++ EY L FL + R L F I TA LH
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSR-VLETDPAFAIANSTASTRDLLHFSSQ 172
Query: 440 V----------RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG-TLGY 488
V IHRD+ NVLL + KI DFGLAR + + +++ A + +
Sbjct: 173 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW 232
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWEL 548
APE + + D +S+G+L+ EI S + G + + ++L ++G +++
Sbjct: 233 MAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP----GILVNSKFYKLVKDG--YQM 286
Query: 549 MDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTS 595
+ P + + I C RPT ++ + L+ +
Sbjct: 287 AQPAFAP--------KNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 3 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 62
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 63 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 114
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 115 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 171
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 172 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 327 LGEGGFGDIY---KGTLKN-GKIVAVKKLAIGISRRTLSDFEN---EVRLISNVHHRNLI 379
LG+GG+G ++ K T N GKI A+K L + R D + E ++ V H ++
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L+ G +L L+ EY++ L F+ E+ G + + L +LH+
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALGHLHQK-- 140
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
II+RD+KP N++L+ K+ DFGL + + + ++ F GT+ Y APE +
Sbjct: 141 -GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTIEYMAPEILMRSGH 198
Query: 500 SEKVDAYSFGVLVLEIISG 518
+ VD +S G L+ ++++G
Sbjct: 199 NRAVDWWSLGALMYDMLTG 217
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 4 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 63
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 64 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 115
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 116 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 172
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 173 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 61
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 62 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 113
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 171 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 66 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 117
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 128/287 (44%), Gaps = 39/287 (13%)
Query: 327 LGEGGFGDIYK----GTLKNG--KIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
LG G FG + + G K + VAVK L G + +E++++ ++ HH N++
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 380 RLLGCCSQ-GPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDII-------------L 425
LLG C++ G L+++ E+ +L +L ++ + +K D+
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 426 GTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG- 484
A+G+ +L + IHRD+ N+LL + KI DFGLAR + ++ + A
Sbjct: 156 QVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 485 TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGT 544
L + APE + + D +SFGVL+ EI S S + E +R + GT
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----LKEGT 268
Query: 545 HWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P+ T E + +++ C + RPT SE+V L
Sbjct: 269 RMRA------PDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 305
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 327 LGEGGFGDIY---KGTLKN-GKIVAVKKLAIGISRRTLSDFEN---EVRLISNVHHRNLI 379
LG+GG+G ++ K T N GKI A+K L + R D + E ++ V H ++
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L+ G +L L+ EY++ L F+ E+ G + + L +LH+
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALGHLHQK-- 140
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
II+RD+KP N++L+ K+ DFGL + + + ++ F GT+ Y APE +
Sbjct: 141 -GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTIEYMAPEILMRSGH 198
Query: 500 SEKVDAYSFGVLVLEIISG 518
+ VD +S G L+ ++++G
Sbjct: 199 NRAVDWWSLGALMYDMLTG 217
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 26 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 85
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 86 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 137
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 138 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 194
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 195 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 33/285 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDFE-----NEVRLISNV-HHRNLI 379
LG G FG + + T GK AV K+A+ + + T E +E++++S++ H N++
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIIL--------GTARGL 431
LLG C+ G ++++ EY L FL + L+ + + L A+G+
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG-TLGYTA 490
A+L IHRD+ NVLL + KI DFGLAR + + +++ A + + A
Sbjct: 166 AFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 222
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMD 550
PE + + D +S+G+L+ EI S + G + + ++L ++G +++
Sbjct: 223 PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP----GILVNSKFYKLVKDG--YQMAQ 276
Query: 551 ESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTS 595
+ P + + I C RPT ++ + L+ +
Sbjct: 277 PAFAP--------KNIYSIMQACWALEPTHRPTFQQICSFLQEQA 313
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 71
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 72 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 123
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 180
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 181 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 33/285 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDFE-----NEVRLISNV-HHRNLI 379
LG G FG + + T GK AV K+A+ + + T E +E++++S++ H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIIL--------GTARGL 431
LLG C+ G ++++ EY L FL + L+ + + L A+G+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG-TLGYTA 490
A+L IHRD+ NVLL + KI DFGLAR + + +++ A + + A
Sbjct: 174 AFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 230
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMD 550
PE + + D +S+G+L+ EI S + G + + ++L ++G +++
Sbjct: 231 PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP----GILVNSKFYKLVKDG--YQMAQ 284
Query: 551 ESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTS 595
+ P + + I C RPT ++ + L+ +
Sbjct: 285 PAFAP--------KNIYSIMQACWALEPTHRPTFQQICSFLQEQA 321
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 3 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 62
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 63 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 114
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 115 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 171
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 172 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 25 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 84
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 85 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 136
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 137 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 193
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 194 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 132/277 (47%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 78 NPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFG A+LL E + + + + + A E
Sbjct: 136 EDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 242
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I + C A+SRP E++
Sbjct: 243 ---PPICTID----VYMIMVKCWMIDADSRPKFRELI 272
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 13/222 (5%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFE--NEVRLISNVHHRN 377
F + LG+GGFG++ ++ GK+ A KKL ++ + NE +++ V+ R
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 378 LIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHED 437
++ L L LV M L ++ + + GL LH +
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 438 FHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHG 497
RI++RD+KP N+LLDD +I+D GLA +PE Q+ GT+GY APE +
Sbjct: 306 ---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR--VGTVGYMAPEVVKNE 360
Query: 498 QLSEKVDAYSFGVLVLEIISG-----TKSSETKGEEGEYLLK 534
+ + D ++ G L+ E+I+G + + K EE E L+K
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK 402
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 132/277 (47%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + L G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 76 NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFGLA+LL E + + + + + A E
Sbjct: 134 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 240
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I + C A+SRP E++
Sbjct: 241 ---PPICTID----VYMIMVKCWMIDADSRPKFRELI 270
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 311 LKDLVSATRK-FSEENKLGEGGFGDIYKGTL------KNGKIVAVKKLAIGISRRTLSDF 363
+ DL RK + LG G FG++Y+G + + VAVK L S + DF
Sbjct: 22 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 81
Query: 364 ENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWK 418
E +IS +H+N++R +G Q ++ E MA L FL + SL
Sbjct: 82 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 419 QRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLD---DDLQPKIADFGLARLLPENQ 475
+ A G YL E+ IHRDI N LL KI DFG+A+ +
Sbjct: 142 DLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRAS 198
Query: 476 SHLSTKFAG-TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS 517
+ A + + PE + G + K D +SFGVL+ EI S
Sbjct: 199 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 132/277 (47%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + L G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 83 NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFGLA+LL E + + + + + A E
Sbjct: 141 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 247
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I + C A+SRP E++
Sbjct: 248 ---PPICTID----VYMIMVKCWMIDADSRPKFRELI 277
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 8 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 67
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 68 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 119
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARH 176
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 177 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 119/245 (48%), Gaps = 20/245 (8%)
Query: 319 RKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLAI-----GISRRTLSDFENEVRLISN 372
+K+ + K+GEG +G ++K + +IVA+K++ + G+ L E+ L+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSAL----REICLLKE 57
Query: 373 VHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLA 432
+ H+N++RL +L LV+E+ + L K+ F G L+ + + +GL
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEF-CDQDLKKY-FDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 433 YLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPE 492
+ H ++HRD+KP N+L++ + + K+A+FGLAR S + TL Y P+
Sbjct: 116 FCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPD 171
Query: 493 YAIHGQL-SEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGT--HWELM 549
+L S +D +S G + E+ + + G + + LKR +RL T W M
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAGRPL-FPGNDVDDQLKRIFRLLGTPTEEQWPSM 230
Query: 550 DESLD 554
+ D
Sbjct: 231 TKLPD 235
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 132/277 (47%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 76 NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFG A+LL E + + + + + A E
Sbjct: 134 EDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 240
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I + C A+SRP E++
Sbjct: 241 ---PPICTID----VYMIMVKCWMIDADSRPKFRELI 270
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 13/222 (5%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFE--NEVRLISNVHHRN 377
F + LG+GGFG++ ++ GK+ A KKL ++ + NE +++ V+ R
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 378 LIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHED 437
++ L L LV M L ++ + + GL LH +
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 438 FHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHG 497
RI++RD+KP N+LLDD +I+D GLA +PE Q+ GT+GY APE +
Sbjct: 306 ---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR--VGTVGYMAPEVVKNE 360
Query: 498 QLSEKVDAYSFGVLVLEIISG-----TKSSETKGEEGEYLLK 534
+ + D ++ G L+ E+I+G + + K EE E L+K
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK 402
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 132/277 (47%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+ +L S + + +E ++++V
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 110 NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 167
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFGLA+LL E + + + + + A E
Sbjct: 168 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 224
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 225 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 274
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I + C A+SRP E++
Sbjct: 275 ---PPICTID----VYMIMVKCWMIDADSRPKFRELI 304
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 12 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 71
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 72 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 123
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARH 180
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 181 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 132/277 (47%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 83 NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFG A+LL E + + + + + A E
Sbjct: 141 EDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 247
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I + C A+SRP E++
Sbjct: 248 ---PPICTID----VYMIMVKCWMIDADSRPKFRELI 277
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
+LG+G FG +YK K +A K+ S L D+ E+ +++ H +++LLG
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+L ++ E+ ++D + RG L Q + L +LH RIIHR
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSK---RIIHR 133
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTK--FAGTLGYTAPEYAIHGQLSE-- 501
D+K NVL+ + ++ADFG++ +N L + F GT + APE + + +
Sbjct: 134 DLKAGNVLMTLEGDIRLADFGVSA---KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 190
Query: 502 ---KVDAYSFGVLVLEI 515
K D +S G+ ++E+
Sbjct: 191 YDYKADIWSLGITLIEM 207
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
+LG+G FG +YK K +A K+ S L D+ E+ +++ H +++LLG
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+L ++ E+ ++D + RG L Q + L +LH RIIHR
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSK---RIIHR 141
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTK--FAGTLGYTAPEYAIHGQLSE-- 501
D+K NVL+ + ++ADFG++ +N L + F GT + APE + + +
Sbjct: 142 DLKAGNVLMTLEGDIRLADFGVSA---KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 198
Query: 502 ---KVDAYSFGVLVLEI 515
K D +S G+ ++E+
Sbjct: 199 YDYKADIWSLGITLIEM 215
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 107/223 (47%), Gaps = 18/223 (8%)
Query: 318 TRKFSEEN-----KLGEGGFGDIYKGTLKNGK-IVAVKKL-AIGISRRTLS-DFENEVRL 369
TR F+ ++ LG+G FG++Y K IVA+K L I + + E+ +
Sbjct: 17 TRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEI 76
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
+++HH N++RL + L+ EY L K L +K + + ++ I+ A
Sbjct: 77 QAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL--QKSCTFDEQRTATIMEELAD 134
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYT 489
L Y H ++IHRDIKP N+LL + KIADFG + P S GTL Y
Sbjct: 135 ALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAP---SLRRKTMCGTLDYL 188
Query: 490 APEYAIHGQL-SEKVDAYSFGVLVLEIISGTKSSETKGEEGEY 531
PE I G++ +EKVD + GVL E++ G E+ Y
Sbjct: 189 PPE-MIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETY 230
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 18/210 (8%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGT-LKNGKIVAVKKLAI-----GISRRTLSDFENEVRLI 370
AT ++ ++G G +G +YK +G VA+K + + G+ T+ + +R +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVAL-LRRL 60
Query: 371 SNVHHRNLIRLLGCCS-----QGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIIL 425
H N++RL+ C+ + ++ LV+E++ + L +L L + D++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 426 GTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGT 485
RGL +LH + I+HRD+KP N+L+ K+ADFGLAR+ Q L+ T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY-SYQMALAPVVV-T 174
Query: 486 LGYTAPEYAIHGQLSEKVDAYSFGVLVLEI 515
L Y APE + + VD +S G + E+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 66 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 117
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI D+GLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLARH 174
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LGEG +G++ + + VAVK + + + + + E+ + ++H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+G L EY + L + + QRF G+ YLH + I HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHR 128
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLP-ENQSHLSTKFAGTLGYTAPEYAIHGQL-SEKV 503
DIKP N+LLD+ KI+DFGLA + N+ L K GTL Y APE + +E V
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 504 DAYSFGVLVLEIISG 518
D +S G+++ +++G
Sbjct: 189 DVWSCGIVLTAMLAG 203
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LGEG +G++ + + VAVK + + + + + E+ + ++H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+G L EY + L + + QRF G+ YLH + I HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHR 128
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLP-ENQSHLSTKFAGTLGYTAPEYAIHGQL-SEKV 503
DIKP N+LLD+ KI+DFGLA + N+ L K GTL Y APE + +E V
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 504 DAYSFGVLVLEIISG 518
D +S G+++ +++G
Sbjct: 189 DVWSCGIVLTAMLAG 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LGEG +G++ + + VAVK + + + + + E+ + ++H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+G L EY + L + + QRF G+ YLH + I HR
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHR 129
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLP-ENQSHLSTKFAGTLGYTAPEYAIHGQL-SEKV 503
DIKP N+LLD+ KI+DFGLA + N+ L K GTL Y APE + +E V
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 504 DAYSFGVLVLEIISG 518
D +S G+++ +++G
Sbjct: 190 DVWSCGIVLTAMLAG 204
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 66 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 117
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGL R
Sbjct: 118 KSQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCRH 174
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGT-LKNGKIVAVKKLAI-----GISRRTLSDFENEVRLI 370
AT ++ ++G G +G +YK +G VA+K + + G+ T+ + +R +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVAL-LRRL 60
Query: 371 SNVHHRNLIRLLGCCS-----QGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIIL 425
H N++RL+ C+ + ++ LV+E++ + L +L L + D++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 426 GTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGT 485
RGL +LH + I+HRD+KP N+L+ K+ADFGLAR+ + T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPV--VVT 174
Query: 486 LGYTAPEYAIHGQLSEKVDAYSFGVLVLEI 515
L Y APE + + VD +S G + E+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 130/288 (45%), Gaps = 40/288 (13%)
Query: 327 LGEGGFGDIYK----GTLKNG--KIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
LG G FG + + G K + VAVK L G + +E++++ ++ HH N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 380 RLLGCCSQ-GPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDII-------------- 424
LLG C++ G L+++ E+ +L +L ++ + +K+ + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 425 LGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG 484
A+G+ +L + IHRD+ N+LL + KI DFGLAR + ++ ++ A
Sbjct: 157 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 485 -TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENG 543
L + APE + + D +SFGVL+ EI S S + E +R + G
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----LKEG 269
Query: 544 THWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
T P+ T E + +++ C + RPT SE+V L
Sbjct: 270 TRMRA------PDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 307
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LGEG +G++ + + VAVK + + + + + E+ + ++H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+G L EY + L + + QRF G+ YLH + I HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHR 128
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLP-ENQSHLSTKFAGTLGYTAPEYAIHGQL-SEKV 503
DIKP N+LLD+ KI+DFGLA + N+ L K GTL Y APE + +E V
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 188
Query: 504 DAYSFGVLVLEIISG 518
D +S G+++ +++G
Sbjct: 189 DVWSCGIVLTAMLAG 203
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LGEG +G++ + + VAVK + + + + + E+ + ++H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+G L EY + L + + QRF G+ YLH + I HR
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHR 129
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLP-ENQSHLSTKFAGTLGYTAPEYAIHGQL-SEKV 503
DIKP N+LLD+ KI+DFGLA + N+ L K GTL Y APE + +E V
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 189
Query: 504 DAYSFGVLVLEIISG 518
D +S G+++ +++G
Sbjct: 190 DVWSCGIVLTAMLAG 204
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LGEG +G++ + + VAVK + + + + + E+ + + ++H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+G L EY + L + + QRF G+ YLH + I HR
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHR 129
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLP-ENQSHLSTKFAGTLGYTAPEYAIHGQL-SEKV 503
DIKP N+LLD+ KI+DFGLA + N+ L K GTL Y APE + +E V
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 504 DAYSFGVLVLEIISG 518
D +S G+++ +++G
Sbjct: 190 DVWSCGIVLTAMLAG 204
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 130/291 (44%), Gaps = 39/291 (13%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDFE-----NEVRLISNV-HHRNLI 379
LG G FG + + T GK AV K+A+ + + T E +E++++S++ H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNW--------------KQRFDIIL 425
LLG C+ G ++++ EY L FL ++ L + +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 426 GTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG- 484
A+G+A+L IHRD+ NVLL + KI DFGLAR + + +++ A
Sbjct: 174 QVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 485 TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGT 544
+ + APE + + D +S+G+L+ EI S + G + + ++L ++G
Sbjct: 231 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP----GILVNSKFYKLVKDG- 285
Query: 545 HWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTS 595
+++ + P + + I C RPT ++ + L+ +
Sbjct: 286 -YQMAQPAFAP--------KNIYSIMQACWALEPTHRPTFQQICSFLQEQA 327
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LGEG +G++ + + VAVK + + + + + E+ + ++H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+G L EY + L + + QRF G+ YLH + I HR
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHR 129
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLP-ENQSHLSTKFAGTLGYTAPEYAIHGQL-SEKV 503
DIKP N+LLD+ KI+DFGLA + N+ L K GTL Y APE + +E V
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 504 DAYSFGVLVLEIISG 518
D +S G+++ +++G
Sbjct: 190 DVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LGEG +G++ + + VAVK + + + + + E+ + ++H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+G L EY + L + + QRF G+ YLH + I HR
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHR 129
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLP-ENQSHLSTKFAGTLGYTAPEYAIHGQL-SEKV 503
DIKP N+LLD+ KI+DFGLA + N+ L K GTL Y APE + +E V
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 504 DAYSFGVLVLEIISG 518
D +S G+++ +++G
Sbjct: 190 DVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LGEG +G++ + + VAVK + + + + + E+ + ++H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+G L EY + L + + QRF G+ YLH + I HR
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHR 129
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLP-ENQSHLSTKFAGTLGYTAPEYAIHGQL-SEKV 503
DIKP N+LLD+ KI+DFGLA + N+ L K GTL Y APE + +E V
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 504 DAYSFGVLVLEIISG 518
D +S G+++ +++G
Sbjct: 190 DVWSCGIVLTAMLAG 204
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 319 RKFSEEN-----KLGEGGFGDIYKGTLKNGKIVAVKKLAI-------GISRRTLSDFENE 366
RKF+ ++ LG+G FG++Y K K + K+ G+ + E
Sbjct: 10 RKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ----LRRE 65
Query: 367 VRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILG 426
+ + S++ H N++R+ + L+ E+ L K L +K G + ++ +
Sbjct: 66 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQRSATFMEE 123
Query: 427 TARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTL 486
A L Y HE ++IHRDIKP N+L+ + KIADFG + P S GTL
Sbjct: 124 LADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTL 177
Query: 487 GYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGT 519
Y PE EKVD + GVL E + G
Sbjct: 178 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGM 210
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 131/277 (47%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 78 NPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFG A+LL E + + + + + A E
Sbjct: 136 EDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 242
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I C A+SRP E++
Sbjct: 243 ---PPICTID----VYMIMRKCWMIDADSRPKFRELI 272
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LGEG +G++ + + VAVK + + + + + E+ + ++H N+++ G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+G L EY + L + + QRF G+ YLH + I HR
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHR 127
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLP-ENQSHLSTKFAGTLGYTAPEYAIHGQL-SEKV 503
DIKP N+LLD+ KI+DFGLA + N+ L K GTL Y APE + +E V
Sbjct: 128 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 187
Query: 504 DAYSFGVLVLEIISG 518
D +S G+++ +++G
Sbjct: 188 DVWSCGIVLTAMLAG 202
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 18/210 (8%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGT-LKNGKIVAVKKLAI-----GISRRTLSDFENEVRLI 370
AT ++ ++G G +G +YK +G VA+K + + G+ T+ + +R +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVAL-LRRL 60
Query: 371 SNVHHRNLIRLLGCCS-----QGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIIL 425
H N++RL+ C+ + ++ LV+E++ + L +L L + D++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 426 GTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGT 485
RGL +LH + I+HRD+KP N+L+ K+ADFGLAR+ Q L T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY-SYQMALDPVVV-T 174
Query: 486 LGYTAPEYAIHGQLSEKVDAYSFGVLVLEI 515
L Y APE + + VD +S G + E+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 29 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 88
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 89 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 140
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 141 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 197
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 198 TDDEMX----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LGEG +G++ + + VAVK + + + + + E+ + ++H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+G L EY + L + + QRF G+ YLH + I HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHR 128
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLP-ENQSHLSTKFAGTLGYTAPEYAIHGQL-SEKV 503
DIKP N+LLD+ KI+DFGLA + N+ L K GTL Y APE + +E V
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 504 DAYSFGVLVLEIISG 518
D +S G+++ +++G
Sbjct: 189 DVWSCGIVLTAMLAG 203
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 108/232 (46%), Gaps = 37/232 (15%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 26 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 85
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 86 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 137
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 138 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR- 193
Query: 471 LPENQSHLSTKFAGTLG---YTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
H + G + Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 194 ------HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LGEG +G++ + + VAVK + + + + + E+ + ++H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+G L EY + L + + QRF G+ YLH + I HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHR 128
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLP-ENQSHLSTKFAGTLGYTAPEYAIHGQL-SEKV 503
DIKP N+LLD+ KI+DFGLA + N+ L K GTL Y APE + +E V
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 504 DAYSFGVLVLEIISG 518
D +S G+++ +++G
Sbjct: 189 DVWSCGIVLTAMLAG 203
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKL-AIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
+G+G F + + GK VAVK + ++ +L EVR++ ++H N+++L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
L LV EY + + +L G + K+ + Y H+ F I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQKF---IVH 136
Query: 445 RDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTK---FAGTLGYTAPEYAIHGQLSE 501
RD+K N+LLD D+ KIADFG + N+ K F G+ Y APE G+ +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFS-----NEFTFGNKLDTFCGSPPYAAPE-LFQGKKYD 190
Query: 502 --KVDAYSFGVLVLEIISGT 519
+VD +S GV++ ++SG+
Sbjct: 191 GPEVDVWSLGVILYTLVSGS 210
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 319 RKFSEEN-----KLGEGGFGDIYKGTLKNGKIVAVKKLAI-------GISRRTLSDFENE 366
RKF+ ++ LG+G FG++Y K K + K+ G+ + E
Sbjct: 9 RKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ----LRRE 64
Query: 367 VRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILG 426
+ + S++ H N++R+ + L+ E+ L K L +K G + ++ +
Sbjct: 65 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQRSATFMEE 122
Query: 427 TARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTL 486
A L Y HE ++IHRDIKP N+L+ + KIADFG + P S GTL
Sbjct: 123 LADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTL 176
Query: 487 GYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGT 519
Y PE EKVD + GVL E + G
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGM 209
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 319 RKFSEEN-----KLGEGGFGDIYKGTLKNGKIVAVKKLAI-------GISRRTLSDFENE 366
RKF+ ++ LG+G FG++Y K K + K+ G+ + E
Sbjct: 9 RKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ----LRRE 64
Query: 367 VRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILG 426
+ + S++ H N++R+ + L+ E+ L K L +K G + ++ +
Sbjct: 65 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQRSATFMEE 122
Query: 427 TARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTL 486
A L Y HE ++IHRDIKP N+L+ + KIADFG + P S GTL
Sbjct: 123 LADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTL 176
Query: 487 GYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGT 519
Y PE EKVD + GVL E + G
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGM 209
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKL-AIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
+G+G F + + GK VAVK + ++ +L EVR++ ++H N+++L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
L LV EY + + +L G + K+ + Y H+ F I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQKF---IVH 136
Query: 445 RDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTK---FAGTLGYTAPEYAIHGQLSE 501
RD+K N+LLD D+ KIADFG + N+ K F G+ Y APE G+ +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFS-----NEFTFGNKLDTFCGSPPYAAPE-LFQGKKYD 190
Query: 502 --KVDAYSFGVLVLEIISGT 519
+VD +S GV++ ++SG+
Sbjct: 191 GPEVDVWSLGVILYTLVSGS 210
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LGEG +G++ + + VAVK + + + + + E+ + ++H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+G L EY + L + + QRF G+ YLH + I HR
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHR 129
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLP-ENQSHLSTKFAGTLGYTAPEYAIHGQL-SEKV 503
DIKP N+LLD+ KI+DFGLA + N+ L K GTL Y APE + +E V
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 504 DAYSFGVLVLEIISG 518
D +S G+++ +++G
Sbjct: 190 DVWSCGIVLTAMLAG 204
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 131/277 (47%), Gaps = 30/277 (10%)
Query: 320 KFSEENKLGEGGFGDIYKGTL----KNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVH 374
+F + LG G FG +YKG + KI VA+K+L S + + +E ++++V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+ ++ RLLG C + L+ + M L ++ E + ++ + + + A+G+ YL
Sbjct: 78 NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEY 493
+ R++HRD+ NVL+ KI DFG A+LL E + + + + + A E
Sbjct: 136 EDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 494 AIHGQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRLYENGTHWELMDE 551
+H + + D +S+GV V E+++ G+K + E +L++ RL +
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---------- 242
Query: 552 SLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVV 588
P CT + V I C A+SRP E++
Sbjct: 243 ---PPICTID----VYMIMRKCWMIDADSRPKFRELI 272
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 66 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 117
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DFGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 175 TDDEM----TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LGEG +G++ + + VAVK + + + + + E+ + ++H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+G L EY + L + + QRF G+ YLH + I HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHR 128
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLP-ENQSHLSTKFAGTLGYTAPEYAIHGQL-SEKV 503
DIKP N+LLD+ KI+DFGLA + N+ L K GTL Y APE + +E V
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 504 DAYSFGVLVLEIISG 518
D +S G+++ +++G
Sbjct: 189 DVWSCGIVLTAMLAG 203
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 31/231 (13%)
Query: 304 QGPVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IG 354
+ P YR K + ++ + +G G +G + K G VAVKKL+ I
Sbjct: 4 ERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSII 63
Query: 355 ISRRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGS 414
++RT E+RL+ ++ H N+I LL + L E + L L G +
Sbjct: 64 HAKRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNN 115
Query: 415 LNWKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLA 468
+ Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI DF LA
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLA 172
Query: 469 RLLPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
R + T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 173 RHTDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 106/225 (47%), Gaps = 20/225 (8%)
Query: 303 LQGPVNYRLKDLVSATRKFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTL-- 360
QGP + + ++ + LG+G FG++ L KI + IS+R +
Sbjct: 16 FQGPGMFVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQ 72
Query: 361 -SDFEN---EVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+D E+ EV+L+ + H N+++L LV E L + KR S
Sbjct: 73 KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV 132
Query: 417 WKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLD---DDLQPKIADFGLARLLPE 473
R II G+ Y+H++ +I+HRD+KP N+LL+ D +I DFGL+ E
Sbjct: 133 DAAR--IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-E 186
Query: 474 NQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
+ K GT Y APE +HG EK D +S GV++ ++SG
Sbjct: 187 ASKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LGEG +G++ + + VAVK + + + + + E+ + ++H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+G L EY + L + + QRF G+ YLH + I HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHR 128
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLP-ENQSHLSTKFAGTLGYTAPEYAIHGQL-SEKV 503
DIKP N+LLD+ KI+DFGLA + N+ L K GTL Y APE + +E V
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 504 DAYSFGVLVLEIISG 518
D +S G+++ +++G
Sbjct: 189 DVWSCGIVLTAMLAG 203
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 23/219 (10%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGI------SRRTLSDFENEVRLISNVHHRNLIR 380
LG+G FG++ LK + ++ A+ + + S EV L+ + H N+++
Sbjct: 30 LGKGSFGEV----LKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 381 LLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
L +V E L + KR S + R II G+ Y+H+
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGITYMHKH--- 140
Query: 441 RIIHRDIKPSNVLLDD---DLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHG 497
I+HRD+KP N+LL+ D KI DFGL+ +N GT Y APE + G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR--IGTAYYIAPE-VLRG 197
Query: 498 QLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRA 536
EK D +S GV++ ++SGT K E +LKR
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD--ILKRV 234
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LGEG +G++ + + VAVK + + + + + E+ + ++H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+G L EY + L + + QRF G+ YLH + I HR
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHR 129
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLP-ENQSHLSTKFAGTLGYTAPEYAIHGQL-SEKV 503
DIKP N+LLD+ KI+DFGLA + N+ L K GTL Y APE + +E V
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 504 DAYSFGVLVLEIISG 518
D +S G+++ +++G
Sbjct: 190 DVWSCGIVLTAMLAG 204
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 23/219 (10%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGI------SRRTLSDFENEVRLISNVHHRNLIR 380
LG+G FG++ LK + ++ A+ + + S EV L+ + H N+++
Sbjct: 30 LGKGSFGEV----LKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 381 LLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
L +V E L + KR S + R II G+ Y+H+
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGITYMHKH--- 140
Query: 441 RIIHRDIKPSNVLLDD---DLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHG 497
I+HRD+KP N+LL+ D KI DFGL+ +N GT Y APE + G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR--IGTAYYIAPE-VLRG 197
Query: 498 QLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRA 536
EK D +S GV++ ++SGT K E +LKR
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD--ILKRV 234
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LGEG +G++ + + VAVK + + + + + E+ + ++H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+G L EY + L + + QRF G+ YLH + I HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHR 128
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLP-ENQSHLSTKFAGTLGYTAPEYAIHGQL-SEKV 503
DIKP N+LLD+ KI+DFGLA + N+ L K GTL Y APE + +E V
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 504 DAYSFGVLVLEIISG 518
D +S G+++ +++G
Sbjct: 189 DVWSCGIVLTAMLAG 203
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LGEG +G++ + + VAVK + + + + + E+ + ++H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+G L EY + L + + QRF G+ YLH + I HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHR 128
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLP-ENQSHLSTKFAGTLGYTAPEYAIHGQL-SEKV 503
DIKP N+LLD+ KI+DFGLA + N+ L K GTL Y APE + +E V
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 188
Query: 504 DAYSFGVLVLEIISG 518
D +S G+++ +++G
Sbjct: 189 DVWSCGIVLTAMLAG 203
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 42/305 (13%)
Query: 314 LVSATRKFSE----ENKLGEGGFGDIYKGTLKN------GKIVAVKKLAIGISRRTLSDF 363
+++A+ KFS+ + +LG+G F + + K KI+ KKL S R
Sbjct: 20 MMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL----SARDFQKL 75
Query: 364 ENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSL-----DKFLFGEKRGSLNWK 418
E E R+ + H N++RL + LV++ + L + + E S +
Sbjct: 76 EREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ 135
Query: 419 QRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQ---PKIADFGLARLLPENQ 475
Q + I AY H + I+HR++KP N+LL + K+ADFGLA + N
Sbjct: 136 QILESI-------AYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVND 183
Query: 476 SHLSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKR 535
S FAGT GY +PE S+ VD ++ GV++ ++ G + + Y +
Sbjct: 184 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIK 243
Query: 536 AWRLYENGTHWE--------LMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEV 587
A W+ L+D L N + A++ +++ +C + S +
Sbjct: 244 AGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDT 303
Query: 588 VALLK 592
V LK
Sbjct: 304 VDCLK 308
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 31/232 (13%)
Query: 296 NISEATELQGPV-NYRLKDLVSATRKFSEENKLGEGGFGDIYKGT-LKNGKIVAVKKL-A 352
+I+ AT+ Q + NYRL + +G+G F + + G+ VAVK +
Sbjct: 3 SITSATDEQPHIGNYRL------------QKTIGKGNFAKVKLARHVLTGREVAVKIIDK 50
Query: 353 IGISRRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKR 412
++ +L EVR++ ++H N+++L L LV EY + + +L
Sbjct: 51 TQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-- 108
Query: 413 GSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLP 472
G + K+ + Y H+ + I+HRD+K N+LLD D+ KIADFG +
Sbjct: 109 GRMKEKEARAKFRQIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFS---- 161
Query: 473 ENQSHLSTK---FAGTLGYTAPEYAIHGQLSE--KVDAYSFGVLVLEIISGT 519
N+ + K F G+ Y APE G+ + +VD +S GV++ ++SG+
Sbjct: 162 -NEFTVGNKLDTFCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGS 211
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKL-AIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
+G+G F + + GK VAVK + ++ +L EVR++ ++H N+++L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
L LV EY + + +L G + K+ + Y H+ F I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQKF---IVH 136
Query: 445 RDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTK---FAGTLGYTAPEYAIHGQLSE 501
RD+K N+LLD D+ KIADFG + N+ K F G Y APE G+ +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFS-----NEFTFGNKLDAFCGAPPYAAPE-LFQGKKYD 190
Query: 502 --KVDAYSFGVLVLEIISGT 519
+VD +S GV++ ++SG+
Sbjct: 191 GPEVDVWSLGVILYTLVSGS 210
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LGEG +G++ + + VAVK + + + + + E+ + ++H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+G L EY + L + + QRF G+ YLH + I HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHR 128
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLP-ENQSHLSTKFAGTLGYTAPEYAIHGQL-SEKV 503
DIKP N+LLD+ KI+DFGLA + N+ L K GTL Y APE + +E V
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 188
Query: 504 DAYSFGVLVLEIISG 518
D +S G+++ +++G
Sbjct: 189 DVWSCGIVLTAMLAG 203
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 19/212 (8%)
Query: 317 ATRKFSEENKLGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDFE----NEVRLIS 371
AT ++ ++G G +G +YK +G VA+K + + EV L+
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 372 NVH---HRNLIRLLGCCS-----QGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDI 423
+ H N++RL+ C+ + ++ LV+E++ + L +L L + D+
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDL 125
Query: 424 ILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA 483
+ RGL +LH + I+HRD+KP N+L+ K+ADFGLAR+ + T
Sbjct: 126 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LTPVV 180
Query: 484 GTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEI 515
TL Y APE + + VD +S G + E+
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 23/219 (10%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGI------SRRTLSDFENEVRLISNVHHRNLIR 380
LG+G FG++ LK + ++ A+ + + S EV L+ + H N+++
Sbjct: 30 LGKGSFGEV----LKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 381 LLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
L +V E L + KR S + R II G+ Y+H+
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGITYMHKH--- 140
Query: 441 RIIHRDIKPSNVLLDD---DLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHG 497
I+HRD+KP N+LL+ D KI DFGL+ +N + + + GT Y APE + G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRG 197
Query: 498 QLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRA 536
EK D +S GV++ ++SGT K E +LKR
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD--ILKRV 234
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 98/201 (48%), Gaps = 14/201 (6%)
Query: 327 LGEGGFGDIYKG-TLKNGKIVAVKKLAIGISRRT--LSDFENEVRLISNVHHRNLIRLLG 383
LG GG +++ L++ + VAVK L ++R F E + + ++H ++ +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 384 C----CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
GP +V EY+ +L + E G + K+ ++I + L + H++
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNG- 136
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPE--NQSHLSTKFAGTLGYTAPEYAIHG 497
IIHRD+KP+N+L+ K+ DFG+AR + + N + GT Y +PE A
Sbjct: 137 --IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGD 194
Query: 498 QLSEKVDAYSFGVLVLEIISG 518
+ + D YS G ++ E+++G
Sbjct: 195 SVDARSDVYSLGCVLYEVLTG 215
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LGEG +G++ + + VAVK + + + + + E+ + ++H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+G L EY + L + + QRF G+ YLH + I HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHR 128
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLP-ENQSHLSTKFAGTLGYTAPEYAIHGQL-SEKV 503
DIKP N+LLD+ KI+DFGLA + N+ L K GTL Y APE + +E V
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 188
Query: 504 DAYSFGVLVLEIISG 518
D +S G+++ +++G
Sbjct: 189 DVWSCGIVLTAMLAG 203
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 327 LGEGGFGDIYK----GTLKNG--KIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
LG G FG + + G K + VAVK L G + +E++++ ++ HH N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 380 RLLGCCSQ-GPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDII-------------- 424
LLG C++ G L+++ E+ +L +L ++ + +K + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 425 LGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG 484
A+G+ +L + IHRD+ N+LL + KI DFGLAR + ++ ++ A
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 485 -TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENG 543
L + APE + + D +SFGVL+ EI S S + E +R + G
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----LKEG 267
Query: 544 THWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
T P+ T E + +++ C + RPT SE+V L
Sbjct: 268 TRMRA------PDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 305
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 103/199 (51%), Gaps = 8/199 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
F + ++LG G G ++K + K +G ++A K + + I + E++++ + ++
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 129
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
G E+ + E+M SLD+ L +K G + + + + +GL YL E
Sbjct: 130 GFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH- 186
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
+I+HRD+KPSN+L++ + K+ DFG++ L ++ ++ F GT Y +PE
Sbjct: 187 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHY 242
Query: 500 SEKVDAYSFGVLVLEIISG 518
S + D +S G+ ++E+ G
Sbjct: 243 SVQSDIWSMGLSLVEMAVG 261
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVR-------LISNVHHRNLI 379
LGEG F + ++ ++ AI I + EN+V ++S + H +
Sbjct: 45 LGEGSFSTVVLAR----ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 100
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+L C +L Y N L K++ K GS + L YLH
Sbjct: 101 KLYFCFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGK-- 156
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEYAIHGQ 498
IIHRD+KP N+LL++D+ +I DFG A++L PE++ + F GT Y +PE
Sbjct: 157 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 215
Query: 499 LSEKVDAYSFGVLVLEIISG 518
+ D ++ G ++ ++++G
Sbjct: 216 ACKSSDLWALGCIIYQLVAG 235
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKL-AIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
+G+G F + + GK VAV+ + ++ +L EVR++ ++H N+++L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
L LV EY + + +L G + K+ + Y H+ F I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQKF---IVH 136
Query: 445 RDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTK---FAGTLGYTAPEYAIHGQLSE 501
RD+K N+LLD D+ KIADFG + N+ K F G+ Y APE G+ +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFS-----NEFTFGNKLDEFCGSPPYAAPE-LFQGKKYD 190
Query: 502 --KVDAYSFGVLVLEIISGT 519
+VD +S GV++ ++SG+
Sbjct: 191 GPEVDVWSLGVILYTLVSGS 210
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 327 LGEGGFGDIYK----GTLKNG--KIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
LG G FG + + G K + VAVK L G + +E++++ ++ HH N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 380 RLLGCCSQ-GPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDII-------------- 424
LLG C++ G L+++ E+ +L +L ++ + +K + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 425 LGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG 484
A+G+ +L + IHRD+ N+LL + KI DFGLAR + ++ ++ A
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 485 -TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENG 543
L + APE + + D +SFGVL+ EI S S + E +R + G
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----LKEG 258
Query: 544 THWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
T P+ T E + +++ C + RPT SE+V L
Sbjct: 259 TRMRA------PDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 296
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 125/287 (43%), Gaps = 26/287 (9%)
Query: 321 FSEENKLGEGGFGDIYKGT-LKNGKIVAVKKLAIG--ISRRTLSDFENEVRLISNVHHRN 377
F E K+G G F ++Y+ L +G VA+KK+ I + + +D E+ L+ ++H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 378 LIRLLGCCSQGPELILVYEYMANSSLDKFL--FGEKRGSLNWKQRFDIILGTARGLAYLH 435
+I+ + EL +V E L + + F +++ + + + + L ++H
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 436 EDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAI 495
R++HRDIKP+NV + K+ D GL R +++ + GT Y +PE
Sbjct: 154 SR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF-SSKTTAAHSLVGTPYYMSPERIH 209
Query: 496 HGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDP 555
+ K D +S G L+ E+ S G++ LY E D P
Sbjct: 210 ENGYNFKSDIWSLGCLLYEM--AALQSPFYGDK--------MNLYSLCKKIEQCDYPPLP 259
Query: 556 NECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKS----TSSSL 598
++ E ++V MC RP ++ V + K T+SSL
Sbjct: 260 SDHYSEELRQLVN---MCINPDPEKRPDVTYVYDVAKRMHACTASSL 303
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKL-AIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
+G+G F + + GK VAV+ + ++ +L EVR++ ++H N+++L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
L LV EY + + +L G + K+ + Y H+ F I+H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQKF---IVH 136
Query: 445 RDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTK---FAGTLGYTAPEYAIHGQLSE 501
RD+K N+LLD D+ KIADFG + N+ K F G+ Y APE G+ +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFS-----NEFTFGNKLDTFCGSPPYAAPE-LFQGKKYD 190
Query: 502 --KVDAYSFGVLVLEIISGT 519
+VD +S GV++ ++SG+
Sbjct: 191 GPEVDVWSLGVILYTLVSGS 210
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 325 NKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLG 383
+KLGEG + +YKG K +VA+K++ + EV L+ ++ H N++ L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
L LV+EY+ + L ++L + +N + RGLAY H +++
Sbjct: 68 IIHTEKSLTLVFEYL-DKDLKQYL-DDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVL 122
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKF----AGTLGYTAPEYAIHG-Q 498
HRD+KP N+L+++ + K+ADFGLAR + TK TL Y P+ +
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLAR-----AKSIPTKTYDNEVVTLWYRPPDILLGSTD 177
Query: 499 LSEKVDAYSFGVLVLEIISG 518
S ++D + G + E+ +G
Sbjct: 178 YSTQIDMWGVGCIFYEMATG 197
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 126/286 (44%), Gaps = 38/286 (13%)
Query: 327 LGEGGFGDIYK----GTLKNG--KIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
LG G FG + + G K + VAVK L G + +E++++ ++ HH N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 380 RLLGCCSQ-GPELILVYEYMANSSLDKFLFGEK------------RGSLNWKQRFDIILG 426
LLG C++ G L+++ E+ +L +L ++ + L +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 427 TARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG-T 485
A+G+ +L + IHRD+ N+LL + KI DFGLAR + ++ + A
Sbjct: 157 VAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 486 LGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTH 545
L + APE + + D +SFGVL+ EI S S + E +R + GT
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----LKEGTR 269
Query: 546 WELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P+ T E + +++ C + RPT SE+V L
Sbjct: 270 MRA------PDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 305
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 101/201 (50%), Gaps = 14/201 (6%)
Query: 327 LGEGGFGDIYKG-TLKNGKIVAVKKLAIGISRRT--LSDFENEVRLISNVHHRNLIRLLG 383
LG GG +++ L++ + VAVK L ++R F E + + ++H ++ +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 384 C----CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
GP +V EY+ +L + E G + K+ ++I + L + H++
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNG- 136
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA--GTLGYTAPEYAIHG 497
IIHRD+KP+N+++ K+ DFG+AR + ++ + ++ A GT Y +PE A
Sbjct: 137 --IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 498 QLSEKVDAYSFGVLVLEIISG 518
+ + D YS G ++ E+++G
Sbjct: 195 SVDARSDVYSLGCVLYEVLTG 215
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 28/205 (13%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKL-AIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
+G+G F + + GK VAVK + ++ +L EVR++ ++H N+++L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 385 CSQGPELILVYEYMANSSLDKFLFG-----EKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L LV EY + + +L EK ++Q + Y H+ F
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQ-------IVSAVQYCHQKF- 126
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTK---FAGTLGYTAPEYAIH 496
I+HRD+K N+LLD D+ KIADFG + N+ K F G+ Y APE
Sbjct: 127 --IVHRDLKAENLLLDADMNIKIADFGFS-----NEFTFGNKLDTFCGSPPYAAPE-LFQ 178
Query: 497 GQLSE--KVDAYSFGVLVLEIISGT 519
G+ + +VD +S GV++ ++SG+
Sbjct: 179 GKKYDGPEVDVWSLGVILYTLVSGS 203
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 101/201 (50%), Gaps = 14/201 (6%)
Query: 327 LGEGGFGDIYKG-TLKNGKIVAVKKLAIGISRRT--LSDFENEVRLISNVHHRNLIRLLG 383
LG GG +++ L++ + VAVK L ++R F E + + ++H ++ +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 384 C----CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
GP +V EY+ +L + E G + K+ ++I + L + H++
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNG- 136
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA--GTLGYTAPEYAIHG 497
IIHRD+KP+N+++ K+ DFG+AR + ++ + ++ A GT Y +PE A
Sbjct: 137 --IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 498 QLSEKVDAYSFGVLVLEIISG 518
+ + D YS G ++ E+++G
Sbjct: 195 SVDARSDVYSLGCVLYEVLTG 215
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 327 LGEGGFGDIYK----GTLKNG--KIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
LG G FG + + G K + VAVK L G + +E++++ ++ HH N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 380 RLLGCCSQ-GPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDII-------------- 424
LLG C++ G L+++ E+ +L +L ++ + +K + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 425 LGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG 484
A+G+ +L + IHRD+ N+LL + KI DFGLAR + ++ ++ A
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 485 -TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENG 543
L + APE + + D +SFGVL+ EI S S + E +R + G
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----LKEG 258
Query: 544 THWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
T P+ T E + +++ C + RPT SE+V L
Sbjct: 259 TRMRA------PDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 296
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 6/201 (2%)
Query: 317 ATRKFSEENKLGEGGFGD-IYKGTLKNGKIVAVKKLAIG-ISRRTLSDFENEVRLISNVH 374
+ K+ K+GEG FG I + ++G+ +K++ I +S + + EV +++N+
Sbjct: 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK 81
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
H N+++ + L +V +Y L K + +K Q D + L ++
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYA 494
H+ +I+HRDIK N+ L D ++ DFG+AR+L + L+ GT Y +PE
Sbjct: 142 HDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVL-NSTVELARACIGTPYYLSPEIC 197
Query: 495 IHGQLSEKVDAYSFGVLVLEI 515
+ + K D ++ G ++ E+
Sbjct: 198 ENKPYNNKSDIWALGCVLYEL 218
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLIRLLGC 384
+G G +G +YKG +K G++ A+K + ++ + + E+ ++ HHRN+ G
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIK--VMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 385 -CSQGP-----ELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
+ P +L LV E+ S+ + K +L + I RGL++LH+
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH- 148
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
++IHRDIK NVLL ++ + K+ DFG++ L +T F GT + APE +
Sbjct: 149 --KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT-FIGTPYWMAPEVIACDE 205
Query: 499 LSE-----KVDAYSFGVLVLEIISG 518
+ K D +S G+ +E+ G
Sbjct: 206 NPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 327 LGEGGFGDIYK----GTLKNG--KIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
LG G FG + + G K + VAVK L G + +E++++ ++ HH N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 380 RLLGCCSQ-GPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDII-------------- 424
LLG C++ G L+++ E+ +L +L ++ + +K + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 425 LGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG 484
A+G+ +L + IHRD+ N+LL + KI DFGLAR + ++ ++ A
Sbjct: 192 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 485 -TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENG 543
L + APE + + D +SFGVL+ EI S S + E +R + G
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----LKEG 304
Query: 544 THWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
T P+ T E + +++ C + RPT SE+V L
Sbjct: 305 TRMRA------PDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 342
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 32/207 (15%)
Query: 327 LGEGGFGDI---YKGTLKNGKIVAVKKLA-----IGISRRTLSDFENEVRLISNVHHRNL 378
+G G +G + Y L+ VAVKKL+ + +RRT E+RL+ ++ H N+
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTY----RELRLLKHLKHENV 89
Query: 379 IRLLGCCSQG------PELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLA 432
I LL + E+ LV M + L+ + K +L+ + ++ RGL
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIV---KSQALSDEHVQFLVYQLLRGLK 145
Query: 433 YLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPE 492
Y+H IIHRD+KPSNV +++D + +I DFGLAR E T + T Y APE
Sbjct: 146 YIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEM----TGYVATRWYRAPE 198
Query: 493 YAIHG-QLSEKVDAYSFGVLVLEIISG 518
++ ++ VD +S G ++ E++ G
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQG 225
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 40/288 (13%)
Query: 327 LGEGGFGDIYK----GTLKNG--KIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
LG G FG + + G K + VAVK L G + +E++++ ++ HH N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 380 RLLGCCSQ-GPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDII-------------- 424
LLG C++ G L+++ E+ +L +L ++ + +K + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 425 LGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG 484
A+G+ +L + IHRD+ N+LL + KI DFGLAR + ++ + A
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 485 -TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENG 543
L + APE + + D +SFGVL+ EI S S + E +R + G
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----LKEG 267
Query: 544 THWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
T P+ T E + +++ C + RPT SE+V L
Sbjct: 268 TRMRA------PDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 305
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 66 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 117
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI FGLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLARH 174
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 321 FSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSD--FENEVRLISNVHHRNL 378
F E++LG G +Y+ K + K A+ + ++T+ E+ ++ + H N+
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQ----KPYALKVLKKTVDKKIVRTEIGVLLRLSHPNI 110
Query: 379 IRLLGCCSQGPELILVYEYMANSSL-DKFLFGEKRGSLNWKQRFDIILGTARGLAYLHED 437
I+L E+ LV E + L D+ + ++G + + D + +AYLHE+
Sbjct: 111 IKLKEIFETPTEISLVLELVTGGELFDRIV---EKGYYSERDAADAVKQILEAVAYLHEN 167
Query: 438 FHVRIIHRDIKPSNVLLD---DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYA 494
I+HRD+KP N+L D KIADFGL++++ E+Q + T GT GY APE
Sbjct: 168 ---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV-EHQVLMKT-VCGTPGYCAPEIL 222
Query: 495 IHGQLSEKVDAYSFGVLVLEIISG 518
+VD +S G++ ++ G
Sbjct: 223 RGCAYGPEVDMWSVGIITYILLCG 246
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 17/198 (8%)
Query: 326 KLGEGGFGDIYKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
K+GEG G + K+ G+ VAVK + + +R F NEV ++ + H N++ +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLF-NEVVIMRDYQHFNVVEMYKS 110
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
G EL ++ E++ +L + + LN +Q + + LAYLH +IH
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHAQ---GVIH 164
Query: 445 RDIKPSNVLLDDDLQPKIADFG----LARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLS 500
RDIK ++LL D + K++DFG +++ +P+ + GT + APE +
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKX-----LVGTPYWMAPEVISRSLYA 219
Query: 501 EKVDAYSFGVLVLEIISG 518
+VD +S G++V+E++ G
Sbjct: 220 TEVDIWSLGIMVIEMVDG 237
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 66 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 117
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI D GLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLARH 174
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 40/288 (13%)
Query: 327 LGEGGFGDIYK----GTLKNG--KIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
LG G FG + + G K + VAVK L G + +E++++ ++ HH N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 380 RLLGCCSQ-GPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDII-------------- 424
LLG C++ G L+++ E+ +L +L ++ + +K + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 425 LGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG 484
A+G+ +L + IHRD+ N+LL + KI DFGLAR + ++ + A
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 485 -TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENG 543
L + APE + + D +SFGVL+ EI S S + E +R + G
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----LKEG 258
Query: 544 THWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
T P+ T E + +++ C + RPT SE+V L
Sbjct: 259 TRMRA------PDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 296
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 33/215 (15%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL---- 382
+G G +G +YKG+L + + VAVK + +R+ + +N R + + H N+ R +
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVFSFA-NRQNFINEKNIYR-VPLMEHDNIARFIVGDE 77
Query: 383 GCCSQGP-ELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF--- 438
+ G E +LV EY N SL K+L + +W + RGLAYLH +
Sbjct: 78 RVTADGRMEYLLVMEYYPNGSLXKYL---SLHTSDWVSSCRLAHSVTRGLAYLHTELPRG 134
Query: 439 -HVR--IIHRDIKPSNVLLDDDLQPKIADFGLARLL-------PENQSHLSTKFAGTLGY 488
H + I HRD+ NVL+ +D I+DFGL+ L P + + + GT+ Y
Sbjct: 135 DHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRY 194
Query: 489 TAPEYAIHGQLS--------EKVDAYSFGVLVLEI 515
APE + G ++ ++VD Y+ G++ EI
Sbjct: 195 MAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 103/199 (51%), Gaps = 8/199 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
F + ++LG G G ++K + K +G ++A K + + I + E++++ + ++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
G E+ + E+M SLD+ L +K G + + + + +GL YL E
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH- 124
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
+I+HRD+KPSN+L++ + K+ DFG++ L ++ ++ F GT Y +PE
Sbjct: 125 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHY 180
Query: 500 SEKVDAYSFGVLVLEIISG 518
S + D +S G+ ++E+ G
Sbjct: 181 SVQSDIWSMGLSLVEMAVG 199
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 103/199 (51%), Gaps = 8/199 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
F + ++LG G G ++K + K +G ++A K + + I + E++++ + ++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
G E+ + E+M SLD+ L +K G + + + + +GL YL E
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH- 124
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
+I+HRD+KPSN+L++ + K+ DFG++ L ++ ++ F GT Y +PE
Sbjct: 125 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHY 180
Query: 500 SEKVDAYSFGVLVLEIISG 518
S + D +S G+ ++E+ G
Sbjct: 181 SVQSDIWSMGLSLVEMAVG 199
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 103/199 (51%), Gaps = 8/199 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
F + ++LG G G ++K + K +G ++A K + + I + E++++ + ++
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 70
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
G E+ + E+M SLD+ L +K G + + + + +GL YL E
Sbjct: 71 GFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH- 127
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
+I+HRD+KPSN+L++ + K+ DFG++ L + ++ +F GT Y +PE
Sbjct: 128 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE---MANEFVGTRSYMSPERLQGTHY 183
Query: 500 SEKVDAYSFGVLVLEIISG 518
S + D +S G+ ++E+ G
Sbjct: 184 SVQSDIWSMGLSLVEMAVG 202
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTL---SDFEN---EVRLISNV 373
++ + LG+G FG++ L KI + IS+R + +D E+ EV+L+ +
Sbjct: 27 RYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
H N+++L LV E L + KR S R II G+ Y
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITY 141
Query: 434 LHEDFHVRIIHRDIKPSNVLLDD---DLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+H++ +I+HRD+KP N+LL+ D +I DFGL+ E + K GT Y A
Sbjct: 142 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIA 196
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISG 518
PE +HG EK D +S GV++ ++SG
Sbjct: 197 PE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 40/288 (13%)
Query: 327 LGEGGFGDIYK----GTLKNG--KIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
LG G FG + + G K + VAVK L G + +E++++ ++ HH N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 380 RLLGCCSQ-GPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDII-------------- 424
LLG C++ G L+++ E+ +L +L ++ + +K + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 425 LGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG 484
A+G+ +L + IHRD+ N+LL + KI DFGLAR + ++ + A
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 485 -TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENG 543
L + APE + + D +SFGVL+ EI S S + E +R + G
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----LKEG 258
Query: 544 THWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
T P+ T E + +++ C + RPT SE+V L
Sbjct: 259 TRMRA------PDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 296
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 32/207 (15%)
Query: 327 LGEGGFGDI---YKGTLKNGKIVAVKKLA-----IGISRRTLSDFENEVRLISNVHHRNL 378
+G G +G + Y L+ VAVKKL+ + +RRT E+RL+ ++ H N+
Sbjct: 28 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTY----RELRLLKHLKHENV 81
Query: 379 IRLLGCCSQG------PELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLA 432
I LL + E+ LV M + L+ + K +L+ + ++ RGL
Sbjct: 82 IGLLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIV---KCQALSDEHVQFLVYQLLRGLK 137
Query: 433 YLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPE 492
Y+H IIHRD+KPSNV +++D + +I DFGLAR E T + T Y APE
Sbjct: 138 YIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEM----TGYVATRWYRAPE 190
Query: 493 YAIHG-QLSEKVDAYSFGVLVLEIISG 518
++ ++ VD +S G ++ E++ G
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLQG 217
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 66 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 117
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI D GLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLARH 174
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 40/288 (13%)
Query: 327 LGEGGFGDIYK----GTLKNG--KIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
LG G FG + + G K + VAVK L G + +E++++ ++ HH N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 380 RLLGCCSQ-GPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDII-------------- 424
LLG C++ G L+++ E+ +L +L ++ + +K + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 425 LGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG 484
A+G+ +L + IHRD+ N+LL + KI DFGLAR + ++ + A
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 485 -TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENG 543
L + APE + + D +SFGVL+ EI S S + E +R + G
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----LKEG 267
Query: 544 THWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
T P+ T E + +++ C + RPT SE+V L
Sbjct: 268 TRMRA------PDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 305
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 103/199 (51%), Gaps = 8/199 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
F + ++LG G G ++K + K +G ++A K + + I + E++++ + ++
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
G E+ + E+M SLD+ L +K G + + + + +GL YL E
Sbjct: 95 GFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH- 151
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
+I+HRD+KPSN+L++ + K+ DFG++ L ++ ++ F GT Y +PE
Sbjct: 152 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHY 207
Query: 500 SEKVDAYSFGVLVLEIISG 518
S + D +S G+ ++E+ G
Sbjct: 208 SVQSDIWSMGLSLVEMAVG 226
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 97/203 (47%), Gaps = 23/203 (11%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTL------SDFENEVRLISNVHHRNLI 379
KLG G +G++ L K+ V++ AI I R+T S EV ++ + H N++
Sbjct: 44 KLGSGAYGEV---LLCRDKVTHVER-AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIM 99
Query: 380 RLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
+L LV E Y D+ + R N II G+ YLH+
Sbjct: 100 KLYDFFEDKRNYYLVMECYKGGELFDEII---HRMKFNEVDAAVIIKQVLSGVTYLHKH- 155
Query: 439 HVRIIHRDIKPSNVLLDD---DLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAI 495
I+HRD+KP N+LL+ D KI DFGL+ + ENQ + + GT Y APE +
Sbjct: 156 --NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF-ENQKKMKERL-GTAYYIAPE-VL 210
Query: 496 HGQLSEKVDAYSFGVLVLEIISG 518
+ EK D +S GV++ +++G
Sbjct: 211 RKKYDEKCDVWSIGVILFILLAG 233
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 103/199 (51%), Gaps = 8/199 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
F + ++LG G G ++K + K +G ++A K + + I + E++++ + ++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
G E+ + E+M SLD+ L +K G + + + + +GL YL E
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH- 124
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
+I+HRD+KPSN+L++ + K+ DFG++ L ++ ++ F GT Y +PE
Sbjct: 125 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHY 180
Query: 500 SEKVDAYSFGVLVLEIISG 518
S + D +S G+ ++E+ G
Sbjct: 181 SVQSDIWSMGLSLVEMAVG 199
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 103/199 (51%), Gaps = 8/199 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
F + ++LG G G ++K + K +G ++A K + + I + E++++ + ++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
G E+ + E+M SLD+ L +K G + + + + +GL YL E
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH- 124
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
+I+HRD+KPSN+L++ + K+ DFG++ L ++ ++ F GT Y +PE
Sbjct: 125 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHY 180
Query: 500 SEKVDAYSFGVLVLEIISG 518
S + D +S G+ ++E+ G
Sbjct: 181 SVQSDIWSMGLSLVEMAVG 199
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 103/199 (51%), Gaps = 8/199 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
F + ++LG G G ++K + K +G ++A K + + I + E++++ + ++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
G E+ + E+M SLD+ L +K G + + + + +GL YL E
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH- 124
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
+I+HRD+KPSN+L++ + K+ DFG++ L ++ ++ F GT Y +PE
Sbjct: 125 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHY 180
Query: 500 SEKVDAYSFGVLVLEIISG 518
S + D +S G+ ++E+ G
Sbjct: 181 SVQSDIWSMGLSLVEMAVG 199
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 44/229 (19%)
Query: 321 FSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHH---- 375
F E LG+G FG + K + + A+KK I + LS +EV L+++++H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKK--IRHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 376 ---------RNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFD---- 422
RN ++ + + L + EY N +L + E N Q+ D
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE-----NLNQQRDEYWR 120
Query: 423 IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLAR------------- 469
+ L+Y+H IIHRD+KP N+ +D+ KI DFGLA+
Sbjct: 121 LFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 470 -LLPENQSHLSTKFAGTLGYTAPEYAI-HGQLSEKVDAYSFGVLVLEII 516
LP + +L++ GT Y A E G +EK+D YS G++ E+I
Sbjct: 178 QNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LGEG G++ + + VAVK + + + + + E+ + ++H N+++ G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
+G L EY + L + + QRF G+ YLH + I HR
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHR 128
Query: 446 DIKPSNVLLDDDLQPKIADFGLARLLP-ENQSHLSTKFAGTLGYTAPEYAIHGQL-SEKV 503
DIKP N+LLD+ KI+DFGLA + N+ L K GTL Y APE + +E V
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 504 DAYSFGVLVLEIISG 518
D +S G+++ +++G
Sbjct: 189 DVWSCGIVLTAMLAG 203
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTL---SDFEN---EVRLISNV 373
++ + LG+G FG++ L KI + IS+R + +D E+ EV+L+ +
Sbjct: 50 RYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
H N+++L LV E L + KR S R II G+ Y
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITY 164
Query: 434 LHEDFHVRIIHRDIKPSNVLLDD---DLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+H++ +I+HRD+KP N+LL+ D +I DFGL+ E + K GT Y A
Sbjct: 165 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIA 219
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISG 518
PE +HG EK D +S GV++ ++SG
Sbjct: 220 PE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTL---SDFEN---EVRLISNV 373
++ + LG+G FG++ L KI + IS+R + +D E+ EV+L+ +
Sbjct: 51 RYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
H N+++L LV E L + KR S R II G+ Y
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITY 165
Query: 434 LHEDFHVRIIHRDIKPSNVLLDD---DLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+H++ +I+HRD+KP N+LL+ D +I DFGL+ E + K GT Y A
Sbjct: 166 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIA 220
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISG 518
PE +HG EK D +S GV++ ++SG
Sbjct: 221 PE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 44/229 (19%)
Query: 321 FSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHH---- 375
F E LG+G FG + K + + A+KK I + LS +EV L+++++H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKK--IRHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 376 ---------RNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFD---- 422
RN ++ + + L + EY N +L + E N Q+ D
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSE-----NLNQQRDEYWR 120
Query: 423 IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLAR------------- 469
+ L+Y+H IIHRD+KP N+ +D+ KI DFGLA+
Sbjct: 121 LFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 470 -LLPENQSHLSTKFAGTLGYTAPEYAI-HGQLSEKVDAYSFGVLVLEII 516
LP + +L++ GT Y A E G +EK+D YS G++ E+I
Sbjct: 178 QNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 103/199 (51%), Gaps = 8/199 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
F + ++LG G G ++K + K +G ++A K + + I + E++++ + ++
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 86
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
G E+ + E+M SLD+ L +K G + + + + +GL YL E
Sbjct: 87 GFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH- 143
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
+I+HRD+KPSN+L++ + K+ DFG++ L ++ ++ F GT Y +PE
Sbjct: 144 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHY 199
Query: 500 SEKVDAYSFGVLVLEIISG 518
S + D +S G+ ++E+ G
Sbjct: 200 SVQSDIWSMGLSLVEMAVG 218
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 31/229 (13%)
Query: 306 PVNYRL---KDLVSATRKFSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLA-----IGIS 356
P YR K + ++ + +G G +G + K G VAVKKL+ I +
Sbjct: 6 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLN 416
+RT E+RL+ ++ H N+I LL + L E + L L G ++
Sbjct: 66 KRTY----RELRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIV 117
Query: 417 WKQRFD------IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
Q+ +I RGL Y+H IIHRD+KPSN+ +++D + KI D GLAR
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLARH 174
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
+ T + T Y APE ++ ++ VD +S G ++ E+++G
Sbjct: 175 TDDEM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 327 LGEGGFGDIYKG-TLKNGKIVAVKKLAIGISRRT--LSDFENEVRLISNVHHRNLIRLLG 383
LG GG +++ L+ + VAVK L ++R F E + + ++H ++ +
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYA 79
Query: 384 C----CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
GP +V EY+ +L + E G + K+ ++I + L + H++
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNG- 136
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA--GTLGYTAPEYAIHG 497
IIHRD+KP+N+++ K+ DFG+AR + ++ + ++ A GT Y +PE A
Sbjct: 137 --IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 498 QLSEKVDAYSFGVLVLEIISG 518
+ + D YS G ++ E+++G
Sbjct: 195 SVDARSDVYSLGCVLYEVLTG 215
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 32/207 (15%)
Query: 327 LGEGGFGDI---YKGTLKNGKIVAVKKLA-----IGISRRTLSDFENEVRLISNVHHRNL 378
+G G +G + Y L+ VAVKKL+ + +RRT E+RL+ ++ H N+
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTY----RELRLLKHLKHENV 89
Query: 379 IRLLGCCSQG------PELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLA 432
I LL + E+ LV M + L+ + K +L+ + ++ RGL
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIV---KCQALSDEHVQFLVYQLLRGLK 145
Query: 433 YLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPE 492
Y+H IIHRD+KPSNV +++D + +I DFGLAR E T + T Y APE
Sbjct: 146 YIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEM----TGYVATRWYRAPE 198
Query: 493 YAIHG-QLSEKVDAYSFGVLVLEIISG 518
++ ++ VD +S G ++ E++ G
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQG 225
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 9/210 (4%)
Query: 312 KDLVSATRKFSEENKLGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDFENEVRLI 370
KD + + +G GGF + + G++VA+K + L + E+ +
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEAL 62
Query: 371 SNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
N+ H+++ +L ++ +V EY L ++ + R L+ ++ +
Sbjct: 63 KNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR--LSEEETRVVFRQIVSA 120
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+AY+H + HRD+KP N+L D+ + K+ DFGL N+ + G+L Y A
Sbjct: 121 VAYVHSQGYA---HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAA 177
Query: 491 PEYAIHGQ--LSEKVDAYSFGVLVLEIISG 518
PE I G+ L + D +S G+L+ ++ G
Sbjct: 178 PE-LIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 114/258 (44%), Gaps = 33/258 (12%)
Query: 321 FSEENKLGEGGFGDIYKGTLKN-GKIVAVKKLAIGISRRTLSDFE---NEVRLISNVHHR 376
F LG+G FG ++ K + A+K L + D E E R++S
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMD-DDVECTMVEKRVLSLAWEH 78
Query: 377 NLIRLLGCCSQGPE-LILVYEYMANSSLDKFLFGEKRGSLNWKQRF--DIILGTARGLAY 433
+ + C Q E L V EY+ L + + L+ + +IILG L +
Sbjct: 79 PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG----LQF 134
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQ--SHLSTKFAGTLGYTAP 491
LH I++RD+K N+LLD D KIADFG+ + EN + +F GT Y AP
Sbjct: 135 LHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNEFCGTPDYIAP 188
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDE 551
E + + + VD +SFGVL+ E++ G S G++ E L H MD
Sbjct: 189 EILLGQKYNHSVDWWSFGVLLYEMLIG--QSPFHGQDEEELF-----------HSIRMDN 235
Query: 552 SLDPNECTKEAAEKVVEI 569
P KEA + +V++
Sbjct: 236 PFYPRWLEKEAKDLLVKL 253
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVA----VKKLAIGISRRTLS--DFENEVRLISNVHHRNLI 379
+LG G F + K K+ + +KK SRR +S D E EV ++ + H N+I
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L ++IL+ E +A L F F ++ SL ++ + + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHS--- 132
Query: 440 VRIIHRDIKPSNVLLDDDLQP----KIADFGLARLLPENQSHLSTKFA---GTLGYTAPE 492
++I H D+KP N++L D P KI DFGLA ++ +F GT + APE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEFKNIFGTPAFVAPE 187
Query: 493 YAIHGQLSEKVDAYSFGVLVLEIISG 518
+ L + D +S GV+ ++SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 327 LGEGGFGDIYKGTLKNGK----IVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+GEG FGD+++G + + VA+K S F E + H ++++L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G ++ P I++ E L FL ++ SL+ + LAYL R
Sbjct: 80 GVITENPVWIIM-ELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLESK---RF 134
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEK 502
+HRDI NVL+ + K+ DFGL+R + ++ + ++K + + APE + +
Sbjct: 135 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 194
Query: 503 VDAYSFGVLVLEII-------SGTKSSETKG--EEGEYL 532
D + FGV + EI+ G K+++ G E GE L
Sbjct: 195 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL 233
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 107/235 (45%), Gaps = 21/235 (8%)
Query: 305 GPVNYRLKDLVSATRKFSEENKLGEGGFGDI----YKGTLKNGKIVAVKKLAIGISRRTL 360
G N + +V + EE LG G F + KGT K +KK + SRR +
Sbjct: 14 GTENLYFQSMVEDHYEMGEE--LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGV 71
Query: 361 S--DFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWK 418
S + E EV ++ + H N+I L +++L+ E ++ L FL ++ SL
Sbjct: 72 SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKESLTED 129
Query: 419 QRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP----KIADFGLARLLPEN 474
+ + G+ YLH RI H D+KP N++L D P K+ DFG+A + E
Sbjct: 130 EATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI-EA 185
Query: 475 QSHLSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKS--SETKGE 527
+ F GT + APE + L + D +S GV+ ++SG ETK E
Sbjct: 186 GNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 239
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 18/248 (7%)
Query: 298 SEATELQGPVNYRLKDLVSATRKFSEENKLGEGGFGDIYKGTLKNGK----IVAVKKLAI 353
+E QG + +D + +GEG FGD+++G + + VA+K
Sbjct: 17 TENLYFQGAMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN 76
Query: 354 GISRRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRG 413
S F E + H ++++L+G ++ P I++ E L FL ++
Sbjct: 77 CTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFL-QVRKY 134
Query: 414 SLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPE 473
SL+ + LAYL R +HRDI NVL+ + K+ DFGL+R + +
Sbjct: 135 SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 191
Query: 474 NQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEII-------SGTKSSETKG 526
+ + ++K + + APE + + D + FGV + EI+ G K+++ G
Sbjct: 192 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 251
Query: 527 --EEGEYL 532
E GE L
Sbjct: 252 RIENGERL 259
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 18/219 (8%)
Query: 327 LGEGGFGDIYKGTLKN----GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+GEG FGD+++G + VA+K S F E + H ++++L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G ++ P I++ E L FL ++ SL+ + LAYL R
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLESK---RF 132
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEK 502
+HRDI NVL+ + K+ DFGL+R + ++ + ++K + + APE + +
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 192
Query: 503 VDAYSFGVLVLEII-------SGTKSSETKG--EEGEYL 532
D + FGV + EI+ G K+++ G E GE L
Sbjct: 193 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL 231
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 12/208 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L+ VA+KKL+ +T + E+ L+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVG 138
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISG 518
PE + E VD +S GV++ E+I G
Sbjct: 194 PEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 327 LGEGGFGDIYKGTLKNGK----IVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+GEG FGD+++G + + VA+K S F E + H ++++L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G ++ P I++ E L FL ++ SL+ + LAYL R
Sbjct: 81 GVITENPVWIIM-ELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLESK---RF 135
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEK 502
+HRDI NVL+ + K+ DFGL+R + ++ + ++K + + APE + +
Sbjct: 136 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 195
Query: 503 VDAYSFGVLVLEII-------SGTKSSETKG--EEGEYL 532
D + FGV + EI+ G K+++ G E GE L
Sbjct: 196 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL 234
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 327 LGEGGFGDIYKGTLKNGK----IVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+GEG FGD+++G + + VA+K S F E + H ++++L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G ++ P I++ E L FL ++ SL+ + LAYL R
Sbjct: 75 GVITENPVWIIM-ELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLESK---RF 129
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEK 502
+HRDI NVL+ + K+ DFGL+R + ++ + ++K + + APE + +
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 189
Query: 503 VDAYSFGVLVLEII-------SGTKSSETKG--EEGEYL 532
D + FGV + EI+ G K+++ G E GE L
Sbjct: 190 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL 228
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 327 LGEGGFGDIYKGTLKNGK----IVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+GEG FGD+++G + + VA+K S F E + H ++++L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G ++ P I++ E L FL ++ SL+ + LAYL R
Sbjct: 83 GVITENPVWIIM-ELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLESK---RF 137
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEK 502
+HRDI NVL+ + K+ DFGL+R + ++ + ++K + + APE + +
Sbjct: 138 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 197
Query: 503 VDAYSFGVLVLEII-------SGTKSSETKG--EEGEYL 532
D + FGV + EI+ G K+++ G E GE L
Sbjct: 198 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL 236
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 327 LGEGGFGDIYKGTLKNGK----IVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+GEG FGD+++G + + VA+K S F E + H ++++L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G ++ P I++ E L FL ++ SL+ + LAYL R
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLESK---RF 132
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEK 502
+HRDI NVL+ + K+ DFGL+R + ++ + ++K + + APE + +
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 192
Query: 503 VDAYSFGVLVLEII-------SGTKSSETKG--EEGEYL 532
D + FGV + EI+ G K+++ G E GE L
Sbjct: 193 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL 231
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 327 LGEGGFGDIYKG-TLKNGKIVAVKKLAIGISRRT--LSDFENEVRLISNVHHRNLIRLLG 383
LG GG +++ L+ + VAVK L ++R F E + + ++H ++ +
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 384 C----CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
GP +V EY+ +L + E G + K+ ++I + L + H++
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNG- 136
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA--GTLGYTAPEYAIHG 497
IIHRD+KP+N+++ K+ DFG+AR + ++ + ++ A GT Y +PE A
Sbjct: 137 --IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 498 QLSEKVDAYSFGVLVLEIISG 518
+ + D YS G ++ E+++G
Sbjct: 195 SVDARSDVYSLGCVLYEVLTG 215
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 31/233 (13%)
Query: 304 QGPVNYRLKDLVSATR--KFSEENKLGEGGFGDIYKG--TLKNGKIVAVKKLAI-----G 354
QGP + + SAT ++ KLGEG +G++YK T+ N + VA+K++ + G
Sbjct: 17 QGPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTN-ETVAIKRIRLEHEEEG 75
Query: 355 ISRRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGS 414
+ + EV L+ + HRN+I L L L++EY A + L K++ +K
Sbjct: 76 VPGTAI----REVSLLKELQHRNIIELKSVIHHNHRLHLIFEY-AENDLKKYM--DKNPD 128
Query: 415 LNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLL---DDDLQP--KIADFGLAR 469
++ + + G+ + H R +HRD+KP N+LL D P KI DFGLAR
Sbjct: 129 VSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
Query: 470 L--LPENQSHLSTKFAGTLGYTAPEYAIHGQ-LSEKVDAYSFGVLVLEIISGT 519
+P Q T TL Y PE + + S VD +S + E++ T
Sbjct: 186 AFGIPIRQ---FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKT 235
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 12/208 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L+ VA+KKL+ +T + E+ L+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVG 138
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISG 518
PE + E VD +S GV++ E+I G
Sbjct: 194 PEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVR-------LISNVHHRNLI 379
LGEG F + ++ ++ AI I + EN+V ++S + H +
Sbjct: 40 LGEGSFSTVVLAR----ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+L +L Y N L K++ K GS + L YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGCLLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGK-- 151
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEYAIHGQ 498
IIHRD+KP N+LL++D+ +I DFG A++L PE++ + F GT Y +PE
Sbjct: 152 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 210
Query: 499 LSEKVDAYSFGVLVLEIISG 518
S+ D ++ G ++ ++++G
Sbjct: 211 ASKSSDLWALGCIIYQLVAG 230
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 326 KLGEGGFGDI----YKGTLKNGKIVAVKKLAIGISRRTLS--DFENEVRLISNVHHRNLI 379
+LG G F + KGT K +KK + SRR +S + E EV ++ + H N+I
Sbjct: 19 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 78
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L +++L+ E ++ L FL ++ SL + + G+ YLH
Sbjct: 79 TLHDIFENKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVHYLHSK-- 134
Query: 440 VRIIHRDIKPSNVLLDDDLQP----KIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAI 495
RI H D+KP N++L D P K+ DFG+A + E + F GT + APE
Sbjct: 135 -RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI-EAGNEFKNIF-GTPEFVAPEIVN 191
Query: 496 HGQLSEKVDAYSFGVLVLEIISGTKS--SETKGE 527
+ L + D +S GV+ ++SG ETK E
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGETKQE 225
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 111/225 (49%), Gaps = 14/225 (6%)
Query: 323 EENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHR----NL 378
E+ +LG G FG + KG + K+V + I + ++E+ +NV + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
+R++G C + +LV E L+K+L ++ + K +++ + G+ YL E
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES- 146
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGT--LGYTAPEYAIH 496
+HRD+ NVLL KI+DFGL++ L ++++ + G + + APE +
Sbjct: 147 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 204
Query: 497 GQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRL 539
+ S K D +SFGVL+ E S G K KG E +L++ R+
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 249
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 111/225 (49%), Gaps = 14/225 (6%)
Query: 323 EENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHR----NL 378
E+ +LG G FG + KG + K+V + I + ++E+ +NV + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
+R++G C + +LV E L+K+L ++ + K +++ + G+ YL E
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES- 146
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGT--LGYTAPEYAIH 496
+HRD+ NVLL KI+DFGL++ L ++++ + G + + APE +
Sbjct: 147 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 204
Query: 497 GQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRL 539
+ S K D +SFGVL+ E S G K KG E +L++ R+
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 249
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 103/207 (49%), Gaps = 29/207 (14%)
Query: 327 LGEGGFGDIY---------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRN 377
LG+G FG ++ G L K++ KK + + R + E ++ +++V+H
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVL--KKATLKVRDRVRTKMERDI--LADVNHPF 91
Query: 378 LIRLLGCCSQGPELILVYEYMANSSL-----DKFLFGEKRGSLNWKQRFDIILGTARGLA 432
+++L +L L+ +++ L + +F E+ + A GL
Sbjct: 92 VVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE-------LALGLD 144
Query: 433 YLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPE 492
+LH + II+RD+KP N+LLD++ K+ DFGL++ +++ + F GT+ Y APE
Sbjct: 145 HLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKK-AYSFCGTVEYMAPE 200
Query: 493 YAIHGQLSEKVDAYSFGVLVLEIISGT 519
S D +S+GVL+ E+++G+
Sbjct: 201 VVNRQGHSHSADWWSYGVLMFEMLTGS 227
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 100/205 (48%), Gaps = 14/205 (6%)
Query: 321 FSEENKLGEGGFGDIYKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
F + KLG G FGD++ ++ G +K + S+ + E E+ ++ ++ H N+I
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 380 RLLGCCSQGPELILVYEYMANSSL-DKFLFGEKRG-SLNWKQRFDIILGTARGLAYLHED 437
++ + +V E L ++ + + RG +L+ +++ LAY H
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 438 FHVRIIHRDIKPSNVLLDDDLQP----KIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
++H+D+KP N+L D P KI DFGLA L ++ ST AGT Y APE
Sbjct: 144 ---HVVHKDLKPENILFQDT-SPHSPIKIIDFGLAELFKSDEH--STNAAGTALYMAPE- 196
Query: 494 AIHGQLSEKVDAYSFGVLVLEIISG 518
++ K D +S GV++ +++G
Sbjct: 197 VFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 108/223 (48%), Gaps = 21/223 (9%)
Query: 323 EENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHR----NL 378
E+ +LG G FG + KG + K+V + I + ++E+ +NV + +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
+R++G C + +LV E L+K+L ++ + K +++ + G+ YL E
Sbjct: 71 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES- 126
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGT--LGYTAPEYAIH 496
+HRD+ NVLL KI+DFGL++ L ++++ + G + + APE +
Sbjct: 127 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 184
Query: 497 GQLSEKVDAYSFGVLVLEIIS-------GTKSSETKG--EEGE 530
+ S K D +SFGVL+ E S G K SE E+GE
Sbjct: 185 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 227
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 18/200 (9%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKL-AIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
+G+G F + + G+ VA+K + ++ +L EVR++ ++H N+++L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
L L+ EY + + +L G + K+ + Y H+ RI+H
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQK---RIVH 134
Query: 445 RDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTK---FAGTLGYTAPEYAIHGQLSE 501
RD+K N+LLD D+ KIADFG + N+ + K F G+ Y APE G+ +
Sbjct: 135 RDLKAENLLLDADMNIKIADFGFS-----NEFTVGGKLDTFCGSPPYAAPE-LFQGKKYD 188
Query: 502 --KVDAYSFGVLVLEIISGT 519
+VD +S GV++ ++SG+
Sbjct: 189 GPEVDVWSLGVILYTLVSGS 208
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 326 KLGEGGFGDI----YKGTLKNGKIVAVKKLAIGISRRTLS--DFENEVRLISNVHHRNLI 379
+LG G F + KGT K +KK + SRR +S + E EV ++ + H N+I
Sbjct: 12 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 71
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L +++L+ E ++ L FL ++ SL + + G+ YLH
Sbjct: 72 TLHDIFENKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVHYLHSK-- 127
Query: 440 VRIIHRDIKPSNVLLDDDLQP----KIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAI 495
RI H D+KP N++L D P K+ DFG+A + E + F GT + APE
Sbjct: 128 -RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI-EAGNEFKNIF-GTPEFVAPEIVN 184
Query: 496 HGQLSEKVDAYSFGVLVLEIISGTKS--SETKGE 527
+ L + D +S GV+ ++SG ETK E
Sbjct: 185 YEPLGLEADMWSIGVITYILLSGASPFLGETKQE 218
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 24/209 (11%)
Query: 326 KLGEGGFGDIYKGTLKNGK----IVAVKKLAIGISR-----RTLSDFE----NEVRLISN 372
KLG G +G++ KNG I +KK R + + F NE+ L+ +
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 373 VHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLA 432
+ H N+I+L LV E+ L + + R + +I+ G+
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGIC 160
Query: 433 YLHEDFHVRIIHRDIKPSNVLLDDD---LQPKIADFGLARLLPENQSHLSTKFAGTLGYT 489
YLH+ I+HRDIKP N+LL++ L KI DFGL+ ++ L + GT Y
Sbjct: 161 YLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK-LRDRL-GTAYYI 215
Query: 490 APEYAIHGQLSEKVDAYSFGVLVLEIISG 518
APE + + +EK D +S GV++ ++ G
Sbjct: 216 APE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 18/219 (8%)
Query: 327 LGEGGFGDIYKGTLKN----GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+GEG FGD+++G + VA+K S F E + H ++++L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G ++ P I++ E L FL ++ SL+ + LAYL R
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLESK---RF 132
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEK 502
+HRDI NVL+ + K+ DFGL+R + ++ ++K + + APE + +
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSA 192
Query: 503 VDAYSFGVLVLEII-------SGTKSSETKG--EEGEYL 532
D + FGV + EI+ G K+++ G E GE L
Sbjct: 193 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL 231
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 8/199 (4%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
F ++LG G G + K + +G I+A K + + I + E++++ + ++
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 77
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
G E+ + E+M SLD+ L KR + I RGLAYL E
Sbjct: 78 GFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSI--AVLRGLAYLREKH- 134
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
+I+HRD+KPSN+L++ + K+ DFG++ L ++ ++ F GT Y APE
Sbjct: 135 -QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMAPERLQGTHY 190
Query: 500 SEKVDAYSFGVLVLEIISG 518
S + D +S G+ ++E+ G
Sbjct: 191 SVQSDIWSMGLSLVELAVG 209
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 112/252 (44%), Gaps = 33/252 (13%)
Query: 327 LGEGGFGDIYKGTLKN-GKIVAVKKLAIGISRRTLSDFE---NEVRLISNVHHRNLIRLL 382
LG+G FG ++ K + A+K L + D E E R++S + +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMD-DDVECTMVEKRVLSLAWEHPFLTHM 83
Query: 383 GCCSQGPE-LILVYEYMANSSLDKFLFGEKRGSLNWKQRF--DIILGTARGLAYLHEDFH 439
C Q E L V EY+ L + + L+ + +IILG L +LH
Sbjct: 84 FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG----LQFLHSK-- 137
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQ--SHLSTKFAGTLGYTAPEYAIHG 497
I++RD+K N+LLD D KIADFG+ + EN + F GT Y APE +
Sbjct: 138 -GIVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNXFCGTPDYIAPEILLGQ 193
Query: 498 QLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNE 557
+ + VD +SFGVL+ E++ G S G++ E L H MD P
Sbjct: 194 KYNHSVDWWSFGVLLYEMLIG--QSPFHGQDEEELF-----------HSIRMDNPFYPRW 240
Query: 558 CTKEAAEKVVEI 569
KEA + +V++
Sbjct: 241 LEKEAKDLLVKL 252
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVA----VKKLAIGISRRTLS--DFENEVRLISNVHHRNLI 379
+LG G F + K K+ + +KK SRR +S D E EV ++ + H N+I
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L ++IL+ E +A L F F ++ SL ++ + + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHS--- 132
Query: 440 VRIIHRDIKPSNVLLDDDLQP----KIADFGLARLLPENQSHLSTKFAGTLG---YTAPE 492
++I H D+KP N++L D P KI DFGLA ++ +F G + APE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEFKNIFGTPEFVAPE 187
Query: 493 YAIHGQLSEKVDAYSFGVLVLEIISG 518
+ L + D +S GV+ ++SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 111/225 (49%), Gaps = 14/225 (6%)
Query: 323 EENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHR----NL 378
E+ +LG G FG + KG + K+V + I + ++E+ +NV + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
+R++G C + +LV E L+K+L ++ + K +++ + G+ YL E
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES- 130
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGT--LGYTAPEYAIH 496
+HRD+ NVLL KI+DFGL++ L ++++ + G + + APE +
Sbjct: 131 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 188
Query: 497 GQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRL 539
+ S K D +SFGVL+ E S G K KG E +L++ R+
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 233
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKL-AIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
+G+G F + + G+ VA+K + ++ +L EVR++ ++H N+++L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIH 444
L L+ EY + + +L G + K+ + Y H+ RI+H
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQK---RIVH 137
Query: 445 RDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTK---FAGTLGYTAPEYAIHGQLSE 501
RD+K N+LLD D+ KIADFG + N+ + K F G Y APE G+ +
Sbjct: 138 RDLKAENLLLDADMNIKIADFGFS-----NEFTVGGKLDAFCGAPPYAAPE-LFQGKKYD 191
Query: 502 --KVDAYSFGVLVLEIISGT 519
+VD +S GV++ ++SG+
Sbjct: 192 GPEVDVWSLGVILYTLVSGS 211
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 108/223 (48%), Gaps = 21/223 (9%)
Query: 323 EENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHR----NL 378
E+ +LG G FG + KG + K+V + I + ++E+ +NV + +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
+R++G C + +LV E L+K+L ++ + K +++ + G+ YL E
Sbjct: 69 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES- 124
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGT--LGYTAPEYAIH 496
+HRD+ NVLL KI+DFGL++ L ++++ + G + + APE +
Sbjct: 125 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 182
Query: 497 GQLSEKVDAYSFGVLVLEIIS-------GTKSSETKG--EEGE 530
+ S K D +SFGVL+ E S G K SE E+GE
Sbjct: 183 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 225
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 111/225 (49%), Gaps = 14/225 (6%)
Query: 323 EENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHR----NL 378
E+ +LG G FG + KG + K+V + I + ++E+ +NV + +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
+R++G C + +LV E L+K+L ++ + K +++ + G+ YL E
Sbjct: 433 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES- 488
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--TLGYTAPEYAIH 496
+HRD+ NVLL KI+DFGL++ L ++++ + G + + APE +
Sbjct: 489 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 546
Query: 497 GQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRL 539
+ S K D +SFGVL+ E S G K KG E +L++ R+
Sbjct: 547 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 591
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 129/298 (43%), Gaps = 46/298 (15%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDFE-----NEVRLISNV-HHRNLI 379
LG G FG + + T GK AV K+A+ + + T E +E++++S++ H N++
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFL-------FG--------------EKRGSLNWK 418
LLG C+ G ++++ EY L FL G E L +
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 419 QRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHL 478
A+G+A+L IHRD+ NVLL + KI DFGLAR + + +++
Sbjct: 159 DLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 215
Query: 479 STKFAG-TLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAW 537
A + + APE + + D +S+G+L+ EI S + G + + +
Sbjct: 216 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP----GILVNSKFY 271
Query: 538 RLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTS 595
+L ++G +++ + P + + I C RPT ++ + L+ +
Sbjct: 272 KLVKDG--YQMAQPAFAP--------KNIYSIMQACWALEPTHRPTFQQICSFLQEQA 319
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 111/225 (49%), Gaps = 14/225 (6%)
Query: 323 EENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHR----NL 378
E+ +LG G FG + KG + K+V + I + ++E+ +NV + +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
+R++G C + +LV E L+K+L ++ + K +++ + G+ YL E
Sbjct: 81 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES- 136
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGT--LGYTAPEYAIH 496
+HRD+ NVLL KI+DFGL++ L ++++ + G + + APE +
Sbjct: 137 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 194
Query: 497 GQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRL 539
+ S K D +SFGVL+ E S G K KG E +L++ R+
Sbjct: 195 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 239
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 111/225 (49%), Gaps = 14/225 (6%)
Query: 323 EENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHR----NL 378
E+ +LG G FG + KG + K+V + I + ++E+ +NV + +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
+R++G C + +LV E L+K+L ++ + K +++ + G+ YL E
Sbjct: 89 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES- 144
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGT--LGYTAPEYAIH 496
+HRD+ NVLL KI+DFGL++ L ++++ + G + + APE +
Sbjct: 145 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 202
Query: 497 GQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRL 539
+ S K D +SFGVL+ E S G K KG E +L++ R+
Sbjct: 203 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 247
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVA----VKKLAIGISRRTLS--DFENEVRLISNVHHRNLI 379
+LG G F + K K+ + +KK SRR +S D E EV ++ + H N+I
Sbjct: 18 ELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L ++IL+ E +A L FL ++ SL ++ + + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS--- 132
Query: 440 VRIIHRDIKPSNVLLDDDLQP----KIADFGLARLLPENQSHLSTKFA---GTLGYTAPE 492
++I H D+KP N++L D P KI DFGLA ++ +F GT + APE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEFKNIFGTPEFVAPE 187
Query: 493 YAIHGQLSEKVDAYSFGVLVLEIISG 518
+ L + D +S GV+ ++SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 19/180 (10%)
Query: 348 VKKLAIGISRRTLS--DFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDK 405
+KK SRR +S D E EV ++ + H N+I L ++IL+ E +A L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 406 FLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP----K 461
FL ++ SL ++ + + G+ YLH ++I H D+KP N++L D P K
Sbjct: 104 FL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 462 IADFGLARLLPENQSHLSTKFA---GTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
I DFGLA ++ +F GT + APE + L + D +S GV+ ++SG
Sbjct: 159 IIDFGLA-----HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 20/201 (9%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKL-AIGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
+G+G F + + GK VAVK + ++ +L EVR+ ++H N+++L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 385 CSQGPELILVYEYMANSSLDKFLFGEKRGS-LNWKQRFDIILGTARGLAYLHEDFHVRII 443
L LV EY + + +L R + +F I+ + Y H+ F I+
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQ---YCHQKF---IV 135
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTK---FAGTLGYTAPEYAIHGQLS 500
HRD+K N+LLD D KIADFG + N+ K F G Y APE G+
Sbjct: 136 HRDLKAENLLLDADXNIKIADFGFS-----NEFTFGNKLDAFCGAPPYAAPE-LFQGKKY 189
Query: 501 E--KVDAYSFGVLVLEIISGT 519
+ +VD +S GV++ ++SG+
Sbjct: 190 DGPEVDVWSLGVILYTLVSGS 210
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 104/206 (50%), Gaps = 24/206 (11%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKL-----AIGISRRTLSDFENEVRLISNVHHRNLIR 380
+G G +G + + G+ VA+KK+ + ++RTL E++++ + H N+I
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL----RELKILKHFKHDNIIA 118
Query: 381 L---LGCCSQGPELILVYEYM--ANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLH 435
+ L E VY + S L + + + +L + F + RGL Y+H
Sbjct: 119 IKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYF--LYQLLRGLKYMH 176
Query: 436 EDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL---PENQSHLSTKFAGTLGYTAPE 492
++IHRD+KPSN+L++++ + KI DFG+AR L P + T++ T Y APE
Sbjct: 177 S---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 233
Query: 493 YAIH-GQLSEKVDAYSFGVLVLEIIS 517
+ + ++ +D +S G + E+++
Sbjct: 234 LMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVA----VKKLAIGISRRTLS--DFENEVRLISNVHHRNLI 379
+LG G F + K K+ + +KK SRR +S D E EV ++ + H N+I
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L ++IL+ E +A L FL ++ SL ++ + + G+ YLH
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS--- 131
Query: 440 VRIIHRDIKPSNVLLDDDLQP----KIADFGLARLLPENQSHLSTKFA---GTLGYTAPE 492
++I H D+KP N++L D P KI DFGLA ++ +F GT + APE
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEFKNIFGTPEFVAPE 186
Query: 493 YAIHGQLSEKVDAYSFGVLVLEIISG 518
+ L + D +S GV+ ++SG
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVA----VKKLAIGISRRTLS--DFENEVRLISNVHHRNLI 379
+LG G F + K K+ + +KK SRR +S D E EV ++ + H N+I
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L ++IL+ E +A L FL ++ SL ++ + + G+ YLH
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS--- 131
Query: 440 VRIIHRDIKPSNVLLDDDLQP----KIADFGLARLLPENQSHLSTKFA---GTLGYTAPE 492
++I H D+KP N++L D P KI DFGLA ++ +F GT + APE
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEFKNIFGTPEFVAPE 186
Query: 493 YAIHGQLSEKVDAYSFGVLVLEIISG 518
+ L + D +S GV+ ++SG
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 19/180 (10%)
Query: 348 VKKLAIGISRRTLS--DFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDK 405
+KK SRR +S D E EV ++ + H N+I L ++IL+ E +A L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 406 FLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP----K 461
FL ++ SL ++ + + G+ YLH ++I H D+KP N++L D P K
Sbjct: 104 FL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 462 IADFGLARLLPENQSHLSTKFAGTLG---YTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
I DFGLA ++ +F G + APE + L + D +S GV+ ++SG
Sbjct: 159 IIDFGLA-----HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVA----VKKLAIGISRRTLS--DFENEVRLISNVHHRNLI 379
+LG G F + K K+ + +KK SRR +S D E EV ++ + H N+I
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L ++IL+ E +A L FL ++ SL ++ + + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS--- 132
Query: 440 VRIIHRDIKPSNVLLDDDLQP----KIADFGLARLLPENQSHLSTKFA---GTLGYTAPE 492
++I H D+KP N++L D P KI DFGLA ++ +F GT + APE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEFKNIFGTPEFVAPE 187
Query: 493 YAIHGQLSEKVDAYSFGVLVLEIISG 518
+ L + D +S GV+ ++SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 111/225 (49%), Gaps = 14/225 (6%)
Query: 323 EENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHR----NL 378
E+ +LG G FG + KG + K+V + I + ++E+ +NV + +
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
+R++G C + +LV E L+K+L ++ + K +++ + G+ YL E
Sbjct: 434 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES- 489
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG--TLGYTAPEYAIH 496
+HRD+ NVLL KI+DFGL++ L ++++ + G + + APE +
Sbjct: 490 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 547
Query: 497 GQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRL 539
+ S K D +SFGVL+ E S G K KG E +L++ R+
Sbjct: 548 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 592
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 35/217 (16%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIG----ISRRTLSDFENEVRLISNVHH 375
F ++ LGEG +G + T K G+IVA+KK+ + RTL E++++ + H
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL----REIKILKHFKH 68
Query: 376 RNLIRLLGCCSQGP-------ELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTA 428
N+I + Q P E+ ++ E M + L + + + S + Q F I T
Sbjct: 69 ENIITIFNI--QRPDSFENFNEVYIIQELM-QTDLHRVI-STQMLSDDHIQYF--IYQTL 122
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL---------PENQSHLS 479
R + LH +IHRD+KPSN+L++ + K+ DFGLAR++ P Q
Sbjct: 123 RAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 480 TKFAGTLGYTAPEYAI-HGQLSEKVDAYSFGVLVLEI 515
T++ T Y APE + + S +D +S G ++ E+
Sbjct: 180 TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 327 LGEGGFGDIYKGTLKNGK----IVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+GEG FGD+++G + + VA+K S F E + H ++++L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G ++ P I++ E L FL ++ SL+ + LAYL R
Sbjct: 458 GVITENPVWIIM-ELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLESK---RF 512
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEK 502
+HRDI NVL+ + K+ DFGL+R + ++ + ++K + + APE + +
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 572
Query: 503 VDAYSFGVLVLEII-------SGTKSSETKG--EEGEYL 532
D + FGV + EI+ G K+++ G E GE L
Sbjct: 573 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL 611
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 15/201 (7%)
Query: 325 NKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRR--TLSDFENEVRLISNVHHRNLIRL 381
+ LG G FG + G + G VAVK L R + + E++ + H ++I+L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKR-GSLNWKQRFDIILGTARGLAYLHEDFHV 440
S + +V EY++ L ++ R + ++ F IL + Y H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSA---VDYCHRHM-- 131
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL- 499
++HRD+KP NVLLD + KIADFGL+ ++ + + L T G+ Y APE I G+L
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF-LRTS-CGSPNYAAPE-VISGRLY 187
Query: 500 -SEKVDAYSFGVLVLEIISGT 519
+VD +S GV++ ++ GT
Sbjct: 188 AGPEVDIWSCGVILYALLCGT 208
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 14/225 (6%)
Query: 323 EENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHR----NL 378
E+ +LG G FG + KG + K+V + I + ++E+ +NV + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
+R++G C + +LV E L+K+L ++ + K +++ + G+ YL E
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES- 130
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL--PENQSHLSTKFAGTLGYTAPEYAIH 496
+HRD+ NVLL KI+DFGL++ L EN T + + APE +
Sbjct: 131 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINY 188
Query: 497 GQLSEKVDAYSFGVLVLEIIS-GTKSSE-TKGEEGEYLLKRAWRL 539
+ S K D +SFGVL+ E S G K KG E +L++ R+
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 233
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 18/219 (8%)
Query: 327 LGEGGFGDIYKGTLKN----GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+GEG FGD+++G + VA+K S F E + H ++++L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G ++ P I++ E L FL ++ SL+ + LAYL R
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLESK---RF 132
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEK 502
+HRDI NVL+ K+ DFGL+R + ++ + ++K + + APE + +
Sbjct: 133 VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 192
Query: 503 VDAYSFGVLVLEII-------SGTKSSETKG--EEGEYL 532
D + FGV + EI+ G K+++ G E GE L
Sbjct: 193 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL 231
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 19/180 (10%)
Query: 348 VKKLAIGISRRTLS--DFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDK 405
+KK SRR +S D E EV ++ + H N+I L ++IL+ E +A L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 406 FLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP----K 461
FL ++ SL ++ + + G+ YLH ++I H D+KP N++L D P K
Sbjct: 104 FL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 462 IADFGLARLLPENQSHLSTKFA---GTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
I DFGLA ++ +F GT + APE + L + D +S GV+ ++SG
Sbjct: 159 IIDFGLA-----HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 19/180 (10%)
Query: 348 VKKLAIGISRRTLS--DFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDK 405
+KK SRR +S D E EV ++ + H N+I L ++IL+ E +A L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 406 FLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP----K 461
FL ++ SL ++ + + G+ YLH ++I H D+KP N++L D P K
Sbjct: 104 FL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 462 IADFGLARLLPENQSHLSTKFA---GTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
I DFGLA ++ +F GT + APE + L + D +S GV+ ++SG
Sbjct: 159 IIDFGLA-----HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVR-------LISNVHHRNLI 379
LGEG F T+ ++ ++ AI I + EN+V ++S + H +
Sbjct: 38 LGEGSFST----TVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+L +L Y N L K++ K GS + L YLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGK-- 149
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEYAIHGQ 498
IIHRD+KP N+LL++D+ +I DFG A++L PE++ + F GT Y +PE
Sbjct: 150 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 208
Query: 499 LSEKVDAYSFGVLVLEIISG 518
+ D ++ G ++ ++++G
Sbjct: 209 ACKSSDLWALGCIIYQLVAG 228
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 327 LGEGGFGDIYKG-TLKNGKIVAVKKLAIGISRRT--LSDFENEVRLISNVHHRNLIRLLG 383
LG GG +++ L+ + VAVK L ++R F E + + ++H ++ +
Sbjct: 37 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 96
Query: 384 C----CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
GP +V EY+ +L + E G + K+ ++I + L + H++
Sbjct: 97 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNG- 153
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA--GTLGYTAPEYAIHG 497
IIHRD+KP+N+++ K+ DFG+AR + ++ + ++ A GT Y +PE A
Sbjct: 154 --IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 211
Query: 498 QLSEKVDAYSFGVLVLEIISG 518
+ + D YS G ++ E+++G
Sbjct: 212 SVDARSDVYSLGCVLYEVLTG 232
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 19/180 (10%)
Query: 348 VKKLAIGISRRTLS--DFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDK 405
+KK SRR +S D E EV ++ + H N+I L ++IL+ E +A L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 406 FLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP----K 461
FL ++ SL ++ + + G+ YLH ++I H D+KP N++L D P K
Sbjct: 104 FL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 462 IADFGLARLLPENQSHLSTKFA---GTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
I DFGLA ++ +F GT + APE + L + D +S GV+ ++SG
Sbjct: 159 IIDFGLA-----HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 35/217 (16%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIG----ISRRTLSDFENEVRLISNVHH 375
F ++ LGEG +G + T K G+IVA+KK+ + RTL E++++ + H
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL----REIKILKHFKH 68
Query: 376 RNLIRLLGCCSQGP-------ELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTA 428
N+I + Q P E+ ++ E M + L + + + S + Q F I T
Sbjct: 69 ENIITIFNI--QRPDSFENFNEVYIIQELM-QTDLHRVI-STQMLSDDHIQYF--IYQTL 122
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL---------PENQSHLS 479
R + LH +IHRD+KPSN+L++ + K+ DFGLAR++ P Q
Sbjct: 123 RAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 480 TKFAGTLGYTAPEYAI-HGQLSEKVDAYSFGVLVLEI 515
+F T Y APE + + S +D +S G ++ E+
Sbjct: 180 VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 19/180 (10%)
Query: 348 VKKLAIGISRRTLS--DFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDK 405
+KK SRR +S D E EV ++ + H N+I L ++IL+ E +A L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 406 FLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP----K 461
FL ++ SL ++ + + G+ YLH ++I H D+KP N++L D P K
Sbjct: 104 FL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 462 IADFGLARLLPENQSHLSTKFAGTLG---YTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
I DFGLA ++ +F G + APE + L + D +S GV+ ++SG
Sbjct: 159 IIDFGLA-----HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 19/180 (10%)
Query: 348 VKKLAIGISRRTLS--DFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDK 405
+KK SRR +S D E EV ++ + H N+I L ++IL+ E +A L
Sbjct: 44 IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFD 103
Query: 406 FLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP----K 461
FL ++ SL ++ + + G+ YLH ++I H D+KP N++L D P K
Sbjct: 104 FL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIK 158
Query: 462 IADFGLARLLPENQSHLSTKFAGTLG---YTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
I DFGLA ++ +F G + APE + L + D +S GV+ ++SG
Sbjct: 159 IIDFGLA-----HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 104/206 (50%), Gaps = 24/206 (11%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKL-----AIGISRRTLSDFENEVRLISNVHHRNLIR 380
+G G +G + + G+ VA+KK+ + ++RTL E++++ + H N+I
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL----RELKILKHFKHDNIIA 117
Query: 381 L---LGCCSQGPELILVYEYM--ANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLH 435
+ L E VY + S L + + + +L + F + RGL Y+H
Sbjct: 118 IKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYF--LYQLLRGLKYMH 175
Query: 436 EDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL---PENQSHLSTKFAGTLGYTAPE 492
++IHRD+KPSN+L++++ + KI DFG+AR L P + T++ T Y APE
Sbjct: 176 S---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 232
Query: 493 YAIH-GQLSEKVDAYSFGVLVLEIIS 517
+ + ++ +D +S G + E+++
Sbjct: 233 LMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 133/297 (44%), Gaps = 34/297 (11%)
Query: 305 GPVNYRL----KDLVSATRKFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTL 360
P ++R+ + V++ S+ LG G FG ++K +K A I R +
Sbjct: 71 APFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKC---EETATGLKLAAKIIKTRGM 127
Query: 361 SDFE---NEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNW 417
D E NE+ +++ + H NLI+L +++LV EY+ L + E S N
Sbjct: 128 KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDE---SYNL 184
Query: 418 KQRFDIILGTAR---GLAYLHEDFHVRIIHRDIKPSNVLL--DDDLQPKIADFGLARLLP 472
+ D IL + G+ ++H+ + I+H D+KP N+L D Q KI DFGLAR
Sbjct: 185 TE-LDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYK 240
Query: 473 ENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYL 532
+ L F GT + APE + +S D +S GV+ ++SG S G+
Sbjct: 241 PREK-LKVNF-GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGL--SPFLGDNDAET 296
Query: 533 LKRAWRLYENGTHWELMDESL-DPNECTKEAAEKVV--EIALMCTQSAANSRPTMSE 586
L W+L DE D +E KE K++ E + + S A P +S+
Sbjct: 297 LNNIL-----ACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSD 348
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 325 NKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRR--TLSDFENEVRLISNVHHRNLIRL 381
+ LG G FG + G + G VAVK L R + + E++ + H ++I+L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKR-GSLNWKQRFDIILGTARGLAYLHEDFHV 440
S + +V EY++ L ++ R + ++ F IL + Y H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSA---VDYCHRHM-- 131
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL- 499
++HRD+KP NVLLD + KIADFGL+ ++ + + G+ Y APE I G+L
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRDSCGSPNYAAPE-VISGRLY 187
Query: 500 -SEKVDAYSFGVLVLEIISGT 519
+VD +S GV++ ++ GT
Sbjct: 188 AGPEVDIWSCGVILYALLCGT 208
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 121/287 (42%), Gaps = 42/287 (14%)
Query: 320 KFSE----ENKLGEGGFGDIYKGTLKN------GKIVAVKKLAIGISRRTLSDFENEVRL 369
KFS+ + +LG+G F + + K KI+ KKL S R E E R+
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL----SARDFQKLEREARI 57
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSL-----DKFLFGEKRGSLNWKQRFDII 424
+ H N++RL + LV++ + L + + E S +Q +
Sbjct: 58 CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE-- 115
Query: 425 LGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQ---PKIADFGLARLLPENQSHLSTK 481
+AY H + I+HR++KP N+LL + K+ADFGLA + N S
Sbjct: 116 -----SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHG 165
Query: 482 FAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYE 541
FAGT GY +PE S+ VD ++ GV++ ++ G + + Y +A
Sbjct: 166 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 225
Query: 542 NGTHWE--------LMDESLDPNECTKEAAEKVVEIALMCTQSAANS 580
W+ L+D L N + A++ +++ +C + S
Sbjct: 226 PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVAS 272
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L+ VA+KKL+ +T + E+ L+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG 138
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISG 518
PE + E VD +S G ++ E+I G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVR-------LISNVHHRNLI 379
LGEG F + ++ ++ AI I + EN+V ++S + H +
Sbjct: 40 LGEGSFSTVVLAR----ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+L +L Y N L K++ K GS + L YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGK-- 151
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEYAIHGQ 498
IIHRD+KP N+LL++D+ +I DFG A++L PE++ + F GT Y +PE
Sbjct: 152 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 499 LSEKVDAYSFGVLVLEIISG 518
+ D ++ G ++ ++++G
Sbjct: 211 ACKSSDLWALGCIIYQLVAG 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVR-------LISNVHHRNLI 379
LGEG F + ++ ++ AI I + EN+V ++S + H +
Sbjct: 38 LGEGSFSTVVLAR----ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+L +L Y N L K++ K GS + L YLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGK-- 149
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEYAIHGQ 498
IIHRD+KP N+LL++D+ +I DFG A++L PE++ + F GT Y +PE
Sbjct: 150 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 208
Query: 499 LSEKVDAYSFGVLVLEIISG 518
+ D ++ G ++ ++++G
Sbjct: 209 ACKSSDLWALGCIIYQLVAG 228
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 13/200 (6%)
Query: 323 EENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVH-HRNLIRL 381
++ LGEG F K K K+ IS+R ++ + E+ + H N+++L
Sbjct: 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKI---ISKRMEANTQKEITALKLCEGHPNIVKL 71
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
LV E + L F +K+ + + I+ ++++H+ V
Sbjct: 72 HEVFHDQLHTFLVMELLNGGEL--FERIKKKKHFSETEASYIMRKLVSAVSHMHD---VG 126
Query: 442 IIHRDIKPSNVLL---DDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
++HRD+KP N+L +D+L+ KI DFG ARL P + L T TL Y APE
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP-CFTLHYAAPELLNQNG 185
Query: 499 LSEKVDAYSFGVLVLEIISG 518
E D +S GV++ ++SG
Sbjct: 186 YDESCDLWSLGVILYTMLSG 205
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVR-------LISNVHHRNLI 379
LGEG F + ++ ++ AI I + EN+V ++S + H +
Sbjct: 38 LGEGSFSTVVLAR----ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+L +L Y N L K++ K GS + L YLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGK-- 149
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEYAIHGQ 498
IIHRD+KP N+LL++D+ +I DFG A++L PE++ + F GT Y +PE
Sbjct: 150 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKS 208
Query: 499 LSEKVDAYSFGVLVLEIISG 518
+ D ++ G ++ ++++G
Sbjct: 209 ACKSSDLWALGCIIYQLVAG 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVR-------LISNVHHRNLI 379
LGEG F + ++ ++ AI I + EN+V ++S + H +
Sbjct: 40 LGEGSFSTVVLAR----ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+L +L Y N L K++ K GS + L YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGK-- 151
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEYAIHGQ 498
IIHRD+KP N+LL++D+ +I DFG A++L PE++ + F GT Y +PE
Sbjct: 152 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 499 LSEKVDAYSFGVLVLEIISG 518
+ D ++ G ++ ++++G
Sbjct: 211 ACKSSDLWALGCIIYQLVAG 230
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVR-------LISNVHHRNLI 379
LGEG F + ++ ++ AI I + EN+V ++S + H +
Sbjct: 40 LGEGSFSTVVLAR----ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+L +L Y N L K++ K GS + L YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGK-- 151
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEYAIHGQ 498
IIHRD+KP N+LL++D+ +I DFG A++L PE++ + F GT Y +PE
Sbjct: 152 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 499 LSEKVDAYSFGVLVLEIISG 518
+ D ++ G ++ ++++G
Sbjct: 211 AXKSSDLWALGCIIYQLVAG 230
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFE---NEVRLISNVHHRNLIRLL 382
LG+G FG + +K G + AVK L + + D E E R++S + + L
Sbjct: 31 LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQD-DDVECTMTEKRILSLARNHPFLTQL 89
Query: 383 GCCSQGPE-LILVYEYMANSSLDKFLFGEKRGSLNWKQRF---DIILGTARGLAYLHEDF 438
CC Q P+ L V E++ L F + R + RF +II L +LH+
Sbjct: 90 FCCFQTPDRLFFVMEFVNGGDL-MFHIQKSRRFDEARARFYAAEII----SALMFLHDK- 143
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
II+RD+K NVLLD + K+ADFG+ + N +T F GT Y APE
Sbjct: 144 --GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT-FCGTPDYIAPEILQEML 200
Query: 499 LSEKVDAYSFGVLVLEIISGTKSSETKGEE 528
VD ++ GVL+ E++ G E + E+
Sbjct: 201 YGPAVDWWAMGVLLYEMLCGHAPFEAENED 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVR-------LISNVHHRNLI 379
LGEG F + ++ ++ AI I + EN+V ++S + H +
Sbjct: 41 LGEGSFSTVVLAR----ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 96
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+L +L Y N L K++ K GS + L YLH
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGK-- 152
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEYAIHGQ 498
IIHRD+KP N+LL++D+ +I DFG A++L PE++ + F GT Y +PE
Sbjct: 153 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 211
Query: 499 LSEKVDAYSFGVLVLEIISG 518
+ D ++ G ++ ++++G
Sbjct: 212 ACKSSDLWALGCIIYQLVAG 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVR-------LISNVHHRNLI 379
LGEG F + ++ ++ AI I + EN+V ++S + H +
Sbjct: 40 LGEGSFSTVVLAR----ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+L +L Y N L K++ K GS + L YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGK-- 151
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEYAIHGQ 498
IIHRD+KP N+LL++D+ +I DFG A++L PE++ + F GT Y +PE
Sbjct: 152 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 499 LSEKVDAYSFGVLVLEIISG 518
+ D ++ G ++ ++++G
Sbjct: 211 ACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVR-------LISNVHHRNLI 379
LGEG F + ++ ++ AI I + EN+V ++S + H +
Sbjct: 38 LGEGSFSTVVLAR----ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+L +L Y N L K++ K GS + L YLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGK-- 149
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEYAIHGQ 498
IIHRD+KP N+LL++D+ +I DFG A++L PE++ + F GT Y +PE
Sbjct: 150 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 208
Query: 499 LSEKVDAYSFGVLVLEIISG 518
+ D ++ G ++ ++++G
Sbjct: 209 ACKSSDLWALGCIIYQLVAG 228
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 121/287 (42%), Gaps = 42/287 (14%)
Query: 320 KFSE----ENKLGEGGFGDIYKGTLKN------GKIVAVKKLAIGISRRTLSDFENEVRL 369
KFS+ + +LG+G F + + K KI+ KKL S R E E R+
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL----SARDFQKLEREARI 58
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSL-----DKFLFGEKRGSLNWKQRFDII 424
+ H N++RL + LV++ + L + + E S +Q +
Sbjct: 59 CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE-- 116
Query: 425 LGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQ---PKIADFGLARLLPENQSHLSTK 481
+AY H + I+HR++KP N+LL + K+ADFGLA + N S
Sbjct: 117 -----SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHG 166
Query: 482 FAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYE 541
FAGT GY +PE S+ VD ++ GV++ ++ G + + Y +A
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 542 NGTHWE--------LMDESLDPNECTKEAAEKVVEIALMCTQSAANS 580
W+ L+D L N + A++ +++ +C + S
Sbjct: 227 PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVAS 273
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVR-------LISNVHHRNLI 379
LGEG F + ++ ++ AI I + EN+V ++S + H +
Sbjct: 40 LGEGSFSTVVLAR----ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+L +L Y N L K++ K GS + L YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGK-- 151
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEYAIHGQ 498
IIHRD+KP N+LL++D+ +I DFG A++L PE++ + F GT Y +PE
Sbjct: 152 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 499 LSEKVDAYSFGVLVLEIISG 518
+ D ++ G ++ ++++G
Sbjct: 211 ACKSSDLWALGCIIYQLVAG 230
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVR-------LISNVHHRNLI 379
LGEG F + ++ ++ AI I + EN+V ++S + H +
Sbjct: 41 LGEGSFSTVVLAR----ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 96
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+L +L Y N L K++ K GS + L YLH
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGK-- 152
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEYAIHGQ 498
IIHRD+KP N+LL++D+ +I DFG A++L PE++ + F GT Y +PE
Sbjct: 153 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 211
Query: 499 LSEKVDAYSFGVLVLEIISG 518
+ D ++ G ++ ++++G
Sbjct: 212 ACKSSDLWALGCIIYQLVAG 231
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L+ VA+KKL+ +T + E+ L+
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 79
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 80 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG 139
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 140 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 194
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISG 518
PE + E VD +S G ++ E+I G
Sbjct: 195 PEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVR-------LISNVHHRNLI 379
LGEG F + ++ ++ AI I + EN+V ++S + H +
Sbjct: 16 LGEGSFSTVVLAR----ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 71
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+L +L Y N L K++ K GS + L YLH
Sbjct: 72 KLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGK-- 127
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEYAIHGQ 498
IIHRD+KP N+LL++D+ +I DFG A++L PE++ + F GT Y +PE
Sbjct: 128 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 186
Query: 499 LSEKVDAYSFGVLVLEIISG 518
+ D ++ G ++ ++++G
Sbjct: 187 ACKSSDLWALGCIIYQLVAG 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVR-------LISNVHHRNLI 379
LGEG F + ++ ++ AI I + EN+V ++S + H +
Sbjct: 15 LGEGSFSTVVLAR----ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 70
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+L +L Y N L K++ K GS + L YLH
Sbjct: 71 KLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGK-- 126
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEYAIHGQ 498
IIHRD+KP N+LL++D+ +I DFG A++L PE++ + F GT Y +PE
Sbjct: 127 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 185
Query: 499 LSEKVDAYSFGVLVLEIISG 518
+ D ++ G ++ ++++G
Sbjct: 186 ACKSSDLWALGCIIYQLVAG 205
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVA----VKKLAIGISRRTLS--DFENEVRLISNVHHRNLI 379
+LG G F + K K+ + +KK SRR +S D E EV ++ + H N+I
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L ++IL+ E +A L FL ++ SL ++ + + G+ YLH
Sbjct: 78 TLHEVYENKTDVILIGELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS--- 132
Query: 440 VRIIHRDIKPSNVLLDDDLQP----KIADFGLARLLPENQSHLSTKFA---GTLGYTAPE 492
++I H D+KP N++L D P KI DFGLA ++ +F GT + APE
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFGNEFKNIFGTPEFVAPE 187
Query: 493 YAIHGQLSEKVDAYSFGVLVLEIISG 518
+ L + D +S GV+ ++SG
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVR-------LISNVHHRNLI 379
LGEG F + ++ ++ AI I + EN+V ++S + H +
Sbjct: 18 LGEGSFSTVVLAR----ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 73
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+L +L Y N L K++ K GS + L YLH
Sbjct: 74 KLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGK-- 129
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEYAIHGQ 498
IIHRD+KP N+LL++D+ +I DFG A++L PE++ + F GT Y +PE
Sbjct: 130 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 188
Query: 499 LSEKVDAYSFGVLVLEIISG 518
+ D ++ G ++ ++++G
Sbjct: 189 ACKSSDLWALGCIIYQLVAG 208
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVR-------LISNVHHRNLI 379
LGEG F + ++ ++ AI I + EN+V ++S + H +
Sbjct: 43 LGEGSFSTVVLAR----ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 98
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+L +L Y N L K++ K GS + L YLH
Sbjct: 99 KLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGK-- 154
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEYAIHGQ 498
IIHRD+KP N+LL++D+ +I DFG A++L PE++ + F GT Y +PE
Sbjct: 155 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 213
Query: 499 LSEKVDAYSFGVLVLEIISG 518
+ D ++ G ++ ++++G
Sbjct: 214 ACKSSDLWALGCIIYQLVAG 233
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVR-------LISNVHHRNLI 379
LGEG F + ++ ++ AI I + EN+V ++S + H +
Sbjct: 17 LGEGSFSTVVLAR----ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 72
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+L +L Y N L K++ K GS + L YLH
Sbjct: 73 KLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGK-- 128
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEYAIHGQ 498
IIHRD+KP N+LL++D+ +I DFG A++L PE++ + F GT Y +PE
Sbjct: 129 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 187
Query: 499 LSEKVDAYSFGVLVLEIISG 518
+ D ++ G ++ ++++G
Sbjct: 188 ACKSSDLWALGCIIYQLVAG 207
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEV-------RLISNVHHRNLI 379
LGEG F + ++ ++ AI I + EN+V ++S + H +
Sbjct: 37 LGEGSFSTVVLAR----ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 92
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+L +L Y N L K++ K GS + L YLH
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGK-- 148
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEYAIHGQ 498
IIHRD+KP N+LL++D+ +I DFG A++L PE++ + F GT Y +PE
Sbjct: 149 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 207
Query: 499 LSEKVDAYSFGVLVLEIISG 518
+ D ++ G ++ ++++G
Sbjct: 208 ACKSSDLWALGCIIYQLVAG 227
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L+ VA+KKL+ +T + E+ L+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVG 138
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISG 518
PE + E VD +S G ++ E+I G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L+ VA+KKL+ +T + E+ L+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG 138
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISG 518
PE + E VD +S G ++ E+I G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 120/282 (42%), Gaps = 42/282 (14%)
Query: 320 KFSE----ENKLGEGGFGDIYKGTLKN------GKIVAVKKLAIGISRRTLSDFENEVRL 369
KFS+ + +LG+G F + + K KI+ KKL S R E E R+
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL----SARDFQKLEREARI 58
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSL-----DKFLFGEKRGSLNWKQRFDII 424
+ H N++RL + LV++ + L + + E S +Q +
Sbjct: 59 CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE-- 116
Query: 425 LGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQ---PKIADFGLARLLPENQSHLSTK 481
+AY H + I+HR++KP N+LL + K+ADFGLA + N S
Sbjct: 117 -----SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHG 166
Query: 482 FAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYE 541
FAGT GY +PE S+ VD ++ GV++ ++ G + + Y +A
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 542 NGTHWE--------LMDESLDPNECTKEAAEKVVEIALMCTQ 575
W+ L+D L N + A++ +++ +C +
Sbjct: 227 PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR 268
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEV-------RLISNVHHRNLI 379
LGEG F + ++ ++ AI I + EN+V ++S + H +
Sbjct: 37 LGEGSFSTVVLAR----ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 92
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+L +L Y N L K++ K GS + L YLH
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGK-- 148
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEYAIHGQ 498
IIHRD+KP N+LL++D+ +I DFG A++L PE++ + F GT Y +PE
Sbjct: 149 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 207
Query: 499 LSEKVDAYSFGVLVLEIISG 518
+ D ++ G ++ ++++G
Sbjct: 208 ACKSSDLWALGCIIYQLVAG 227
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEV-------RLISNVHHRNLI 379
LGEG F + ++ ++ AI I + EN+V ++S + H +
Sbjct: 22 LGEGSFSTVVLAR----ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 77
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
+L +L Y N L K++ K GS + L YLH
Sbjct: 78 KLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGK-- 133
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLL-PENQSHLSTKFAGTLGYTAPEYAIHGQ 498
IIHRD+KP N+LL++D+ +I DFG A++L PE++ + F GT Y +PE
Sbjct: 134 -GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 192
Query: 499 LSEKVDAYSFGVLVLEIISG 518
+ D ++ G ++ ++++G
Sbjct: 193 ACKSSDLWALGCIIYQLVAG 212
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 12/209 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ + +G G G + + L G VAVKKL+ +T + E+ L+
Sbjct: 19 TVLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLK 76
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L L+ ++ ++ G
Sbjct: 77 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCG 136
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR N + T + T Y A
Sbjct: 137 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTN--FMMTPYVVTRYYRA 191
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISGT 519
PE + E VD +S G ++ E++ G+
Sbjct: 192 PEVILGMGYKENVDIWSVGCIMGELVKGS 220
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L VA+KKL+ +T + E+ L+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXG 138
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEII 516
PE + E VD +S G ++ E++
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 12/208 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L+ VA+KKL+ +T + E+ L+
Sbjct: 23 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 80
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 81 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG 140
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + F T Y A
Sbjct: 141 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMVPFVVTRYYRA 195
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISG 518
PE + E VD +S G ++ E+I G
Sbjct: 196 PEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 18/219 (8%)
Query: 327 LGEGGFGDIYKGTLKNGK----IVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+GEG FGD+++G + + VA+K S F E + H ++++L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G ++ P I++ E L FL ++ SL+ + LAYL R
Sbjct: 458 GVITENPVWIIM-ELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLESK---RF 512
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEK 502
+HRDI NVL+ K+ DFGL+R + ++ + ++K + + APE + +
Sbjct: 513 VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 572
Query: 503 VDAYSFGVLVLEII-------SGTKSSETKG--EEGEYL 532
D + FGV + EI+ G K+++ G E GE L
Sbjct: 573 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL 611
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 98/208 (47%), Gaps = 20/208 (9%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTL---SDFEN---EVRLISNV 373
++ + LG+G FG++ L KI + IS+R + +D E+ EV+L+ +
Sbjct: 27 RYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
H N+ +L LV E L + KR S R II G+ Y
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITY 141
Query: 434 LHEDFHVRIIHRDIKPSNVLLDD---DLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
H++ +I+HRD+KP N+LL+ D +I DFGL+ ++ GT Y A
Sbjct: 142 XHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK--IGTAYYIA 196
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISG 518
PE +HG EK D +S GV++ ++SG
Sbjct: 197 PE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 91/185 (49%), Gaps = 16/185 (8%)
Query: 346 VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDK 405
VA+K++ + + ++ + E++ +S HH N++ EL LV + ++ S+
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 406 FLF-----GE-KRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQ 459
+ GE K G L+ I+ GL YLH++ IHRD+K N+LL +D
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGS 159
Query: 460 PKIADFGLARLLPE----NQSHLSTKFAGTLGYTAPEYA--IHGQLSEKVDAYSFGVLVL 513
+IADFG++ L ++ + F GT + APE + G K D +SFG+ +
Sbjct: 160 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAI 218
Query: 514 EIISG 518
E+ +G
Sbjct: 219 ELATG 223
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L+ VA+KKL+ +T + E+ L+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCG 138
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISG 518
PE + E VD +S G ++ E+I G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L+ VA+KKL+ +T + E+ L+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCG 138
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISG 518
PE + E VD +S G ++ E+I G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 100/205 (48%), Gaps = 25/205 (12%)
Query: 327 LGEGGFGDIYKGTLKNGK-------IVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
LG+G FG ++ +G + +KK + + R + E ++ + V+H ++
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI--LVEVNHPFIV 89
Query: 380 RLLGCCSQGPELILVYEYMANSSL-----DKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+L +L L+ +++ L + +F E+ + A L +L
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE-------LALALDHL 142
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYA 494
H + II+RD+KP N+LLD++ K+ DFGL++ +++ + F GT+ Y APE
Sbjct: 143 HS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK-AYSFCGTVEYMAPEVV 198
Query: 495 IHGQLSEKVDAYSFGVLVLEIISGT 519
++ D +SFGVL+ E+++GT
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGT 223
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 23/255 (9%)
Query: 346 VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDK 405
VA+K++ + + ++ + E++ +S HH N++ EL LV + ++ S+
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 406 FLF-----GE-KRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQ 459
+ GE K G L+ I+ GL YLH++ IHRD+K N+LL +D
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGS 154
Query: 460 PKIADFGLARLLPE----NQSHLSTKFAGTLGYTAPEYA--IHGQLSEKVDAYSFGVLVL 513
+IADFG++ L ++ + F GT + APE + G K D +SFG+ +
Sbjct: 155 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAI 213
Query: 514 EIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMC 573
E+ +G +Y + L L + + E K+ + ++ +C
Sbjct: 214 ELATGAAPYH------KYPPMKVLMLTLQNDPPSL-ETGVQDKEMLKKYGKSFRKMISLC 266
Query: 574 TQSAANSRPTMSEVV 588
Q RPT +E++
Sbjct: 267 LQKDPEKRPTAAELL 281
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L+ VA+KKL+ +T + E+ L+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCG 138
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISG 518
PE + E VD +S G ++ E+I G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 35/217 (16%)
Query: 321 FSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIG----ISRRTLSDFENEVRLISNVHH 375
F ++ LGEG +G + T K G+IVA+KK+ + RTL E++++ + H
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL----REIKILKHFKH 68
Query: 376 RNLIRLLGCCSQGP-------ELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTA 428
N+I + Q P E+ ++ E M + L + + + S + Q F I T
Sbjct: 69 ENIITIFNI--QRPDSFENFNEVYIIQELM-QTDLHRVI-STQMLSDDHIQYF--IYQTL 122
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL---------PENQSHLS 479
R + LH +IHRD+KPSN+L++ + K+ DFGLAR++ P Q
Sbjct: 123 RAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 480 TKFAGTLGYTAPEYAI-HGQLSEKVDAYSFGVLVLEI 515
T+ T Y APE + + S +D +S G ++ E+
Sbjct: 180 TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 22/208 (10%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSDFE-NEVRLISNVHHRNL 378
+ + +G G +G + + G VA+KKL + E+RL+ ++ H N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 379 IRLLGCCSQGPEL------ILVYEYMANSSLDKFLFGEKRGSLNWKQRFD-IILGTARGL 431
I LL + L LV +M + L K + EK G + R ++ +GL
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMG-TDLGKLMKHEKLG----EDRIQFLVYQMLKGL 141
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAP 491
Y+H IIHRD+KP N+ +++D + KI DFGLAR + S + T Y AP
Sbjct: 142 RYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXVV-TRWYRAP 194
Query: 492 EYAIHG-QLSEKVDAYSFGVLVLEIISG 518
E ++ + ++ VD +S G ++ E+I+G
Sbjct: 195 EVILNWMRYTQTVDIWSVGCIMAEMITG 222
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIG-ISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
+G G +G K K +GKI+ K+L G ++ +EV L+ + H N++R
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 385 C--SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR- 441
L +V EY L + + + F + + T LA ++ H R
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL--KECHRRS 131
Query: 442 -----IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIH 496
++HRD+KP+NV LD K+ DFGLAR+L + S T F GT Y +PE
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT-FVGTPYYMSPEQMNR 190
Query: 497 GQLSEKVDAYSFGVLVLEI 515
+EK D +S G L+ E+
Sbjct: 191 MSYNEKSDIWSLGCLLYEL 209
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L VA+KKL+ +T + E+ L+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXG 138
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEII 516
PE + E VD +S G ++ E++
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L VA+KKL+ +T + E+ L+
Sbjct: 59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 116
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 117 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG 176
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 177 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 231
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEII 516
PE + E VD +S G ++ E++
Sbjct: 232 PEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 42/228 (18%)
Query: 321 FSEENKLGEGGFGDIYKG-TLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHH---- 375
F E LG+G FG + K + + A+KK I + LS +EV L+++++H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKK--IRHTEEKLSTILSEVXLLASLNHQYVV 65
Query: 376 ---------RNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQR---FDI 423
RN ++ + L + EY N +L + E +LN +QR + +
Sbjct: 66 RYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSE---NLN-QQRDEYWRL 121
Query: 424 ILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLAR-------------- 469
L+Y+H IIHR++KP N+ +D+ KI DFGLA+
Sbjct: 122 FRQILEALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 470 LLPENQSHLSTKFAGTLGYTAPEYAI-HGQLSEKVDAYSFGVLVLEII 516
LP + +L++ GT Y A E G +EK+D YS G++ E I
Sbjct: 179 NLPGSSDNLTSAI-GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L VA+KKL+ +T + E+ L+
Sbjct: 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 71
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 72 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXG 131
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 132 IKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRA 186
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEII 516
PE + E VD +S G ++ E++
Sbjct: 187 PEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 14/215 (6%)
Query: 327 LGEGGFGDIYKG-TLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LG+G +G +Y G L N +A+K++ SR + E+ L ++ H+N+++ LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS-QPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR---GLAYLHEDFHVRI 442
S+ + + E + SL L K G L ++ I T + GL YLH++ +I
Sbjct: 89 SENGFIKIFMEQVPGGSLSALL-RSKWGPLKDNEQ-TIGFYTKQILEGLKYLHDN---QI 143
Query: 443 IHRDIKPSNVLLDD-DLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ--L 499
+HRDIK NVL++ KI+DFG ++ L T F GTL Y APE G
Sbjct: 144 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMAPEIIDKGPRGY 202
Query: 500 SEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLK 534
+ D +S G ++E+ +G GE + K
Sbjct: 203 GKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK 237
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 18/208 (8%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
+++ + +GEG +G + K+ VA+KK++ + E++++ H N+
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFD------IILGTARGLA 432
I + + P + E M + L L G L Q + RGL
Sbjct: 104 IGI-NDIIRAPTI----EQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLK 158
Query: 433 YLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH--LSTKFAGTLGYTA 490
Y+H ++HRD+KPSN+LL+ KI DFGLAR+ + H T++ T Y A
Sbjct: 159 YIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 215
Query: 491 PEYAIHGQ-LSEKVDAYSFGVLVLEIIS 517
PE ++ + ++ +D +S G ++ E++S
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 100/205 (48%), Gaps = 25/205 (12%)
Query: 327 LGEGGFGDIYKGTLKNGK-------IVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
LG+G FG ++ +G + +KK + + R + E ++ + V+H ++
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI--LVEVNHPFIV 90
Query: 380 RLLGCCSQGPELILVYEYMANSSL-----DKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+L +L L+ +++ L + +F E+ + A L +L
Sbjct: 91 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE-------LALALDHL 143
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYA 494
H + II+RD+KP N+LLD++ K+ DFGL++ +++ + F GT+ Y APE
Sbjct: 144 HS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK-AYSFCGTVEYMAPEVV 199
Query: 495 IHGQLSEKVDAYSFGVLVLEIISGT 519
++ D +SFGVL+ E+++GT
Sbjct: 200 NRRGHTQSADWWSFGVLMFEMLTGT 224
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L VA+KKL+ +T + E+ L+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCG 138
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEII 516
PE + E VD +S G ++ E++
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 100/205 (48%), Gaps = 25/205 (12%)
Query: 327 LGEGGFGDIYKGTLKNGK-------IVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLI 379
LG+G FG ++ +G + +KK + + R + E ++ + V+H ++
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI--LVEVNHPFIV 89
Query: 380 RLLGCCSQGPELILVYEYMANSSL-----DKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+L +L L+ +++ L + +F E+ + A L +L
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAE-------LALALDHL 142
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYA 494
H + II+RD+KP N+LLD++ K+ DFGL++ +++ + F GT+ Y APE
Sbjct: 143 HS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK-AYSFCGTVEYMAPEVV 198
Query: 495 IHGQLSEKVDAYSFGVLVLEIISGT 519
++ D +SFGVL+ E+++GT
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGT 223
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 9/198 (4%)
Query: 327 LGEGGFGDIYKGTLKNGK----IVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
LGEG FG++Y+G N K VAVK + F +E ++ N+ H ++++L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G + P I++ E L +L + SL L + +AYL +
Sbjct: 80 GIIEEEPTWIIM-ELYPYGELGHYL-ERNKNSLKVLTLVLYSLQICKAMAYLES---INC 134
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEK 502
+HRDI N+L+ K+ DFGL+R + + + ++ + + +PE + +
Sbjct: 135 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 194
Query: 503 VDAYSFGVLVLEIISGTK 520
D + F V + EI+S K
Sbjct: 195 SDVWMFAVCMWEILSFGK 212
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 9/198 (4%)
Query: 327 LGEGGFGDIYKGTLKNGK----IVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
LGEG FG++Y+G N K VAVK + F +E ++ N+ H ++++L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G + P I++ E L +L + SL L + +AYL +
Sbjct: 76 GIIEEEPTWIIM-ELYPYGELGHYL-ERNKNSLKVLTLVLYSLQICKAMAYLES---INC 130
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEK 502
+HRDI N+L+ K+ DFGL+R + + + ++ + + +PE + +
Sbjct: 131 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 190
Query: 503 VDAYSFGVLVLEIISGTK 520
D + F V + EI+S K
Sbjct: 191 SDVWMFAVCMWEILSFGK 208
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIG-ISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
+G G +G K K +GKI+ K+L G ++ +EV L+ + H N++R
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 385 C--SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR- 441
L +V EY L + + + F + + T LA ++ H R
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL--KECHRRS 131
Query: 442 -----IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIH 496
++HRD+KP+NV LD K+ DFGLAR+L ++ + +F GT Y +PE
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED-FAKEFVGTPYYMSPEQMNR 190
Query: 497 GQLSEKVDAYSFGVLVLEI 515
+EK D +S G L+ E+
Sbjct: 191 MSYNEKSDIWSLGCLLYEL 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLAIG-ISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
+G G +G K K +GKI+ K+L G ++ +EV L+ + H N++R
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 385 C--SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR- 441
L +V EY L + + + F + + T LA ++ H R
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL--KECHRRS 131
Query: 442 -----IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIH 496
++HRD+KP+NV LD K+ DFGLAR+L + S + F GT Y +PE
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS-FAKAFVGTPYYMSPEQMNR 190
Query: 497 GQLSEKVDAYSFGVLVLEI 515
+EK D +S G L+ E+
Sbjct: 191 MSYNEKSDIWSLGCLLYEL 209
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
+++ + +GEG +G + K+ VA+KK++ + E++++ H N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 379 IRL-----LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
I + Q ++ +V + M + L K L K L+ + RGL Y
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL---KTQHLSNDHICYFLYQILRGLKY 139
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH--LSTKFAGTLGYTAP 491
+H ++HRD+KPSN+LL+ KI DFGLAR+ + H T++ T Y AP
Sbjct: 140 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 492 EYAIHGQ-LSEKVDAYSFGVLVLEIISG 518
E ++ + ++ +D +S G ++ E++S
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 104/216 (48%), Gaps = 22/216 (10%)
Query: 319 RKFSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFEN-------EVRLI 370
+K+ ++ +G G + + + G AVK + + R + E E ++
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 371 SNVH-HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
V H ++I L+ + LV++ M L F + ++ +L+ K+ I+
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGEL--FDYLTEKVALSEKETRSIMRSLLE 211
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYT 489
+++LH + I+HRD+KP N+LLDD++Q +++DFG + L + + GT GY
Sbjct: 212 AVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--LRELCGTPGYL 266
Query: 490 APEY------AIHGQLSEKVDAYSFGVLVLEIISGT 519
APE H ++VD ++ GV++ +++G+
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILFTLLAGS 302
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
+++ + +GEG +G + K+ VA+KK++ + E++++ H N+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 85
Query: 379 IRL-----LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
I + Q ++ +V + M + L K L K L+ + RGL Y
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL---KTQHLSNDHICYFLYQILRGLKY 141
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH--LSTKFAGTLGYTAP 491
+H ++HRD+KPSN+LL+ KI DFGLAR+ + H T++ T Y AP
Sbjct: 142 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 492 EYAIHGQ-LSEKVDAYSFGVLVLEIIS 517
E ++ + ++ +D +S G ++ E++S
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 24/212 (11%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKI-VAVKKLAI----GISRRTLSDFENEVRLISNVH 374
+++ + +GEG +G + K+ VA+KK++ +RTL E++++
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL----REIKILLRFR 79
Query: 375 HRNLIRL-----LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
H N+I + Q ++ +V + M + L K L K L+ + R
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL---KTQHLSNDHICYFLYQILR 135
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH--LSTKFAGTLG 487
GL Y+H ++HRD+KPSN+LL+ KI DFGLAR+ + H T++ T
Sbjct: 136 GLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 488 YTAPEYAIHGQ-LSEKVDAYSFGVLVLEIISG 518
Y APE ++ + ++ +D +S G ++ E++S
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 9/198 (4%)
Query: 327 LGEGGFGDIYKGTLKNGK----IVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
LGEG FG++Y+G N K VAVK + F +E ++ N+ H ++++L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
G + P I++ E L +L + SL L + +AYL +
Sbjct: 92 GIIEEEPTWIIM-ELYPYGELGHYL-ERNKNSLKVLTLVLYSLQICKAMAYLES---INC 146
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEK 502
+HRDI N+L+ K+ DFGL+R + + + ++ + + +PE + +
Sbjct: 147 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 206
Query: 503 VDAYSFGVLVLEIISGTK 520
D + F V + EI+S K
Sbjct: 207 SDVWMFAVCMWEILSFGK 224
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 14/215 (6%)
Query: 327 LGEGGFGDIYKG-TLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LG+G +G +Y G L N +A+K++ SR + E+ L ++ H+N+++ LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS-QPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR---GLAYLHEDFHVRI 442
S+ + + E + SL L K G L ++ I T + GL YLH++ +I
Sbjct: 75 SENGFIKIFMEQVPGGSLSALL-RSKWGPLKDNEQ-TIGFYTKQILEGLKYLHDN---QI 129
Query: 443 IHRDIKPSNVLLDD-DLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ--L 499
+HRDIK NVL++ KI+DFG ++ L + + F GTL Y APE G
Sbjct: 130 VHRDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPRGY 188
Query: 500 SEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLK 534
+ D +S G ++E+ +G GE + K
Sbjct: 189 GKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK 223
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 20/213 (9%)
Query: 321 FSEENKLGEGGFGDIYKG-TLKNGKIVAVKKL------AIGISRRTLSDFENEVRLISNV 373
F N LG+G F +Y+ ++ G VA+K + G+ +R +NEV++ +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRV----QNEVKIHCQL 68
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGE-KRGSLNWKQRFDIILGTARGLA 432
H +++ L + LV E N ++++L K S N + F + G+
Sbjct: 69 KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHF--MHQIITGML 126
Query: 433 YLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLA-RLLPENQSHLSTKFAGTLGYTAP 491
YLH I+HRD+ SN+LL ++ KIADFGLA +L ++ H + GT Y +P
Sbjct: 127 YLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISP 181
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISGTKSSET 524
E A + D +S G + ++ G +T
Sbjct: 182 EIATRSAHGLESDVWSLGCMFYTLLIGRPPFDT 214
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L VA+KKL+ +T + E+ L+
Sbjct: 59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 116
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 117 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG 176
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 177 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 231
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEII 516
PE + E VD +S G ++ E++
Sbjct: 232 PEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
+++ + +GEG +G + K+ VA+KK++ + E++++ H N+
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 91
Query: 379 IRL-----LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
I + Q ++ +V + M + L K L K L+ + RGL Y
Sbjct: 92 IGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL---KTQHLSNDHICYFLYQILRGLKY 147
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH--LSTKFAGTLGYTAP 491
+H ++HRD+KPSN+LL+ KI DFGLAR+ + H T++ T Y AP
Sbjct: 148 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 204
Query: 492 EYAIHGQ-LSEKVDAYSFGVLVLEIIS 517
E ++ + ++ +D +S G ++ E++S
Sbjct: 205 EIMLNSKGYTKSIDIWSVGCILAEMLS 231
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
+++ + +GEG +G + K+ VA+KK++ + E++++ H N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 379 IRL-----LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
I + Q ++ +V + M + L K L K L+ + RGL Y
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL---KTQHLSNDHICYFLYQILRGLKY 139
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH--LSTKFAGTLGYTAP 491
+H ++HRD+KPSN+LL+ KI DFGLAR+ + H T++ T Y AP
Sbjct: 140 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 492 EYAIHGQ-LSEKVDAYSFGVLVLEIIS 517
E ++ + ++ +D +S G ++ E++S
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L VA+KKL+ +T + E+ L+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG 138
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEII 516
PE + E VD +S G ++ E++
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
+++ + +GEG +G + K+ VA+KK++ + E++++ H N+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 379 IRL-----LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
I + Q ++ +V + M + L K L K L+ + RGL Y
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL---KTQHLSNDHICYFLYQILRGLKY 141
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH--LSTKFAGTLGYTAP 491
+H ++HRD+KPSN+LL+ KI DFGLAR+ + H T++ T Y AP
Sbjct: 142 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 492 EYAIHGQ-LSEKVDAYSFGVLVLEIIS 517
E ++ + ++ +D +S G ++ E++S
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
+++ + +GEG +G + K+ VA+KK++ + E++++ H N+
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 379 IRL-----LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
I + Q ++ +V + M + L K L K L+ + RGL Y
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL---KTQHLSNDHICYFLYQILRGLKY 144
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH--LSTKFAGTLGYTAP 491
+H ++HRD+KPSN+LL+ KI DFGLAR+ + H T++ T Y AP
Sbjct: 145 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 201
Query: 492 EYAIHGQ-LSEKVDAYSFGVLVLEIIS 517
E ++ + ++ +D +S G ++ E++S
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
+++ + +GEG +G + K+ VA+KK++ + E++++ H N+
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 89
Query: 379 IRL-----LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
I + Q ++ +V + M + L K L K L+ + RGL Y
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL---KTQHLSNDHICYFLYQILRGLKY 145
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH--LSTKFAGTLGYTAP 491
+H ++HRD+KPSN+LL+ KI DFGLAR+ + H T++ T Y AP
Sbjct: 146 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 202
Query: 492 EYAIHGQ-LSEKVDAYSFGVLVLEIIS 517
E ++ + ++ +D +S G ++ E++S
Sbjct: 203 EIMLNSKGYTKSIDIWSVGCILAEMLS 229
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
+++ + +GEG +G + K+ VA+KK++ + E++++ H N+
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 80
Query: 379 IRL-----LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
I + Q ++ +V + M + L K L K L+ + RGL Y
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL---KTQHLSNDHICYFLYQILRGLKY 136
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH--LSTKFAGTLGYTAP 491
+H ++HRD+KPSN+LL+ KI DFGLAR+ + H T++ T Y AP
Sbjct: 137 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 193
Query: 492 EYAIHGQ-LSEKVDAYSFGVLVLEIIS 517
E ++ + ++ +D +S G ++ E++S
Sbjct: 194 EIMLNSKGYTKSIDIWSVGCILAEMLS 220
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
+++ + +GEG +G + K+ VA+KK++ + E++++ H N+
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 379 IRL-----LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
I + Q ++ +V + M + L K L K L+ + RGL Y
Sbjct: 104 IGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL---KTQHLSNDHICYFLYQILRGLKY 159
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH--LSTKFAGTLGYTAP 491
+H ++HRD+KPSN+LL+ KI DFGLAR+ + H T++ T Y AP
Sbjct: 160 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 492 EYAIHGQ-LSEKVDAYSFGVLVLEIIS 517
E ++ + ++ +D +S G ++ E++S
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
+++ + +GEG +G + K+ VA+KK++ + E++++ H N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 379 IRL-----LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
I + Q ++ +V + M + L K L K L+ + RGL Y
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL---KTQHLSNDHICYFLYQILRGLKY 143
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH--LSTKFAGTLGYTAP 491
+H ++HRD+KPSN+LL+ KI DFGLAR+ + H T++ T Y AP
Sbjct: 144 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 492 EYAIHGQ-LSEKVDAYSFGVLVLEIIS 517
E ++ + ++ +D +S G ++ E++S
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
+++ + +GEG +G + K+ VA+KK++ + E++++ H N+
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 379 IRL-----LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
I + Q ++ +V + M + L K L K L+ + RGL Y
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL---KTQHLSNDHICYFLYQILRGLKY 137
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH--LSTKFAGTLGYTAP 491
+H ++HRD+KPSN+LL+ KI DFGLAR+ + H T++ T Y AP
Sbjct: 138 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 492 EYAIHGQ-LSEKVDAYSFGVLVLEIIS 517
E ++ + ++ +D +S G ++ E++S
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLS 221
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 24/212 (11%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKI-VAVKKLAI----GISRRTLSDFENEVRLISNVH 374
+++ + +GEG +G + K+ VA+KK++ +RTL E++++
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 79
Query: 375 HRNLIRL-----LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
H N+I + Q ++ +V + M + L K L K L+ + R
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL---KTQHLSNDHICYFLYQILR 135
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH--LSTKFAGTLG 487
GL Y+H ++HRD+KPSN+LL+ KI DFGLAR+ + H T++ T
Sbjct: 136 GLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 488 YTAPEYAIHGQ-LSEKVDAYSFGVLVLEIISG 518
Y APE ++ + ++ +D +S G ++ E++S
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L VA+KKL+ +T + E+ L+
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 79
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 80 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG 139
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 140 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 194
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEII 516
PE + E VD +S G ++ E++
Sbjct: 195 PEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
+++ + +GEG +G + K+ VA+KK++ + E++++ H N+
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 379 IRL-----LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
I + Q ++ +V + M + L K L K L+ + RGL Y
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL---KTQHLSNDHICYFLYQILRGLKY 137
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH--LSTKFAGTLGYTAP 491
+H ++HRD+KPSN+LL+ KI DFGLAR+ + H T++ T Y AP
Sbjct: 138 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 492 EYAIHGQ-LSEKVDAYSFGVLVLEIIS 517
E ++ + ++ +D +S G ++ E++S
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLS 221
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
+++ + +GEG +G + K+ VA+KK++ + E++++ H N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENI 87
Query: 379 IRL-----LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
I + Q ++ +V + M + L K L K L+ + RGL Y
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL---KTQHLSNDHICYFLYQILRGLKY 143
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH--LSTKFAGTLGYTAP 491
+H ++HRD+KPSN+LL+ KI DFGLAR+ + H T++ T Y AP
Sbjct: 144 IHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 492 EYAIHGQ-LSEKVDAYSFGVLVLEIIS 517
E ++ + ++ +D +S G ++ E++S
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L VA+KKL+ +T + E+ L+
Sbjct: 20 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 77
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 78 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG 137
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 138 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 192
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEII 516
PE + E VD +S G ++ E++
Sbjct: 193 PEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L VA+KKL+ +T + E+ L+
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 79
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 80 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG 139
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 140 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 194
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEII 516
PE + E VD +S G ++ E++
Sbjct: 195 PEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L VA+KKL+ +T + E+ L+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG 138
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEII 516
PE + E VD +S G ++ E++
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
+++ + +GEG +G + K+ VA+KK++ + E++++ H N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 379 IRL-----LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
I + Q ++ +V + M + L K L K L+ + RGL Y
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL---KTQHLSNDHICYFLYQILRGLKY 143
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH--LSTKFAGTLGYTAP 491
+H ++HRD+KPSN+LL+ KI DFGLAR+ + H T++ T Y AP
Sbjct: 144 IHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 492 EYAIHGQ-LSEKVDAYSFGVLVLEIIS 517
E ++ + ++ +D +S G ++ E++S
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 32/268 (11%)
Query: 327 LGEGGFGDIYKGT------LKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
LG+GGF ++ + + GKIV L R +S E+ + ++ H++++
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS---MEISIHRSLAHQHVVG 85
Query: 381 LLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G + +V E SL + ++R +L + + G YLH +
Sbjct: 86 FHGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRN--- 140
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLS 500
R+IHRD+K N+ L++DL+ KI DFGLA + E GT Y APE S
Sbjct: 141 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTPNYIAPEVLSKKGHS 199
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
+VD +S G ++ ++ G ET + YL R+ +N E P
Sbjct: 200 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYL-----RIKKN--------EYSIPKHINP 246
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEVV 588
AA + ++ Q+ +RPT++E++
Sbjct: 247 VAASLIQKM----LQTDPTARPTINELL 270
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L VA+KKL+ +T + E+ L+
Sbjct: 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 71
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 72 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG 131
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 132 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 186
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEII 516
PE + E VD +S G ++ E++
Sbjct: 187 PEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L VA+KKL+ +T + E+ L+
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 72
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 73 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG 132
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 133 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 187
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEII 516
PE + E VD +S G ++ E++
Sbjct: 188 PEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L VA+KKL+ +T + E+ L+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG 138
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEII 516
PE + E VD +S G ++ E++
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 24/212 (11%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKI-VAVKKLAI----GISRRTLSDFENEVRLISNVH 374
+++ + +GEG +G + K+ VA+KK++ +RTL E++++
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIKILLRFR 79
Query: 375 HRNLIRL-----LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
H N+I + Q ++ +V + M + L K L K L+ + R
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL---KTQHLSNDHICYFLYQILR 135
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH--LSTKFAGTLG 487
GL Y+H ++HRD+KPSN+LL+ KI DFGLAR+ + H T++ T
Sbjct: 136 GLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 488 YTAPEYAIHGQ-LSEKVDAYSFGVLVLEIISG 518
Y APE ++ + ++ +D +S G ++ E++S
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 12/208 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L+ VA+KKL+ +T + E+ L+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG 138
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T T Y A
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPEVVTRYYRA 193
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISG 518
PE + E VD +S G ++ E+I G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ + +G G G + + L G VAVKKL+ +T + E+ L+
Sbjct: 21 TVLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLK 78
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L L+ ++ ++ G
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCG 138
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR N + T + T Y A
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN--FMMTPYVVTRYYRA 193
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISG 518
PE + + VD +S G ++ E++ G
Sbjct: 194 PEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 32/268 (11%)
Query: 327 LGEGGFGDIYKGT------LKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
LG+GGF ++ + + GKIV L R +S E+ + ++ H++++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS---MEISIHRSLAHQHVVG 81
Query: 381 LLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G + +V E SL + ++R +L + + G YLH +
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRN--- 136
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLS 500
R+IHRD+K N+ L++DL+ KI DFGLA + E GT Y APE S
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTPNYIAPEVLSKKGHS 195
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
+VD +S G ++ ++ G ET + YL R+ +N E P
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYL-----RIKKN--------EYSIPKHINP 242
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEVV 588
AA + ++ Q+ +RPT++E++
Sbjct: 243 VAASLIQKM----LQTDPTARPTINELL 266
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L VA+KKL+ +T + E+ L+
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 72
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 73 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG 132
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 133 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 187
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEII 516
PE + E VD +S G ++ E++
Sbjct: 188 PEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 32/268 (11%)
Query: 327 LGEGGFGDIYKGT------LKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
LG+GGF ++ + + GKIV L R +S E+ + ++ H++++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS---MEISIHRSLAHQHVVG 81
Query: 381 LLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G + +V E SL + ++R +L + + G YLH +
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRN--- 136
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLS 500
R+IHRD+K N+ L++DL+ KI DFGLA + E GT Y APE S
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTPNYIAPEVLSKKGHS 195
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
+VD +S G ++ ++ G ET + YL R+ +N E P
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYL-----RIKKN--------EYSIPKHINP 242
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEVV 588
AA + ++ Q+ +RPT++E++
Sbjct: 243 VAASLIQKM----LQTDPTARPTINELL 266
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 128/299 (42%), Gaps = 51/299 (17%)
Query: 327 LGEGGFGDIYK----GTLKN--GKIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
LG G FG + + G +K+ VAVK L +E++++S + +H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILG------------- 426
LLG C+ G +++ EY L FL KR S + I+
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFL-RRKRDSFICSKTSPAIMEDDELALDLEDLLS 172
Query: 427 ----TARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKF 482
A+G+A+L IHRD+ N+LL KI DFGLAR + +N S+ K
Sbjct: 173 FSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHI-KNDSNYVVKG 228
Query: 483 AGTL--GYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS-GTKSSETKGEEGEY--LLKRAW 537
L + APE + + + D +S+G+ + E+ S G+ + ++ ++K +
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF 288
Query: 538 RLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSS 596
R+ L P + A ++ +I C + RPT ++V L++ S
Sbjct: 289 RM-------------LSP----EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 330
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 25/211 (11%)
Query: 319 RKFSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFE-NEVRLISNVHHR 376
+ + +G G +G + K +G+ VA+KKL+ + E+ L+ ++ H
Sbjct: 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 83
Query: 377 NLIRLLGCCSQGPELILVYEY-----MANSSLDKFL---FGEKRGSLNWKQRFDIILGTA 428
N+I LL + L Y++ + L K + F E++ ++
Sbjct: 84 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-------LVYQML 136
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
+GL Y+H ++HRD+KP N+ +++D + KI DFGLAR + T + T Y
Sbjct: 137 KGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR----HADAEMTGYVVTRWY 189
Query: 489 TAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
APE + ++ VD +S G ++ E+++G
Sbjct: 190 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTG 220
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 107/230 (46%), Gaps = 25/230 (10%)
Query: 305 GPVNYRLKDLVSATR-KFSEENKLGEGGFGDIY----KGTLKNG--KIVAVKKLAIGISR 357
GP+ + A R ++ LG G G++ + T K KI++ +K AIG +R
Sbjct: 1 GPLGSHMSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAR 60
Query: 358 RT--LSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKR-GS 414
+ E E+ ++ ++H +I++ + +V E M L + G KR
Sbjct: 61 EADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKE 119
Query: 415 LNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLL---DDDLQPKIADFGLARLL 471
K F +L + YLHE+ IIHRD+KP NVLL ++D KI DFG +++L
Sbjct: 120 ATCKLYFYQML---LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 173
Query: 472 PENQSHLSTKFAGTLGYTAPEYAIH---GQLSEKVDAYSFGVLVLEIISG 518
E + L GT Y APE + + VD +S GV++ +SG
Sbjct: 174 GE--TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 35/227 (15%)
Query: 319 RKFSEENKLGEGGFGDIYKGT-LKNGKIVAVKKL--AIGISRRTLSDFENEVRLISNVHH 375
RK+ KLG+G +G ++K + G++VAVKK+ A S F + L H
Sbjct: 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGH 68
Query: 376 RNLIRLLGC--CSQGPELILVYEYMANSSLDKFLFGEKRGS-LNWKQRFDIILGTARGLA 432
N++ LL ++ LV++YM L R + L + ++ + +
Sbjct: 69 ENIVNLLNVLRADNDRDVYLVFDYMETD-----LHAVIRANILEPVHKQYVVYQLIKVIK 123
Query: 433 YLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL----------LP---------- 472
YLH ++HRD+KPSN+LL+ + K+ADFGL+R +P
Sbjct: 124 YLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 473 ENQSHLSTKFAGTLGYTAPEYAI-HGQLSEKVDAYSFGVLVLEIISG 518
++ + T + T Y APE + + ++ +D +S G ++ EI+ G
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG 227
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 130/306 (42%), Gaps = 51/306 (16%)
Query: 320 KFSEENKLGEGGFGDIYK----GTLKN--GKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
+ S LG G FG + + G +K+ VAVK L +E++++S +
Sbjct: 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 83
Query: 374 -HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILG------ 426
+H N++ LLG C+ G +++ EY L FL KR S + I+
Sbjct: 84 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL-RRKRDSFICSKTSPAIMEDDELAL 142
Query: 427 -----------TARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQ 475
A+G+A+L IHRD+ N+LL KI DFGLAR + +N
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDI-KND 198
Query: 476 SHLSTKFAGTL--GYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS-GTKSSETKGEEGEY- 531
S+ K L + APE + + + D +S+G+ + E+ S G+ + ++
Sbjct: 199 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 258
Query: 532 -LLKRAWRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVAL 590
++K +R+ L P + A ++ +I C + RPT ++V L
Sbjct: 259 KMIKEGFRM-------------LSP----EHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 301
Query: 591 LKSTSS 596
++ S
Sbjct: 302 IEKQIS 307
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
+++ + +GEG +G + K+ VA+KK++ + E++++ H N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 379 IRL-----LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
I + Q ++ +V + M + L K L K L+ + RGL Y
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL---KCQHLSNDHICYFLYQILRGLKY 143
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH--LSTKFAGTLGYTAP 491
+H ++HRD+KPSN+LL+ KI DFGLAR+ + H T++ T Y AP
Sbjct: 144 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 492 EYAIHGQ-LSEKVDAYSFGVLVLEIIS 517
E ++ + ++ +D +S G ++ E++S
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 25/211 (11%)
Query: 319 RKFSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFE-NEVRLISNVHHR 376
+ + +G G +G + K +G+ VA+KKL+ + E+ L+ ++ H
Sbjct: 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 101
Query: 377 NLIRLLGCCSQGPELILVYEY-----MANSSLDKFL---FGEKRGSLNWKQRFDIILGTA 428
N+I LL + L Y++ + L K + F E++ ++
Sbjct: 102 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-------LVYQML 154
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
+GL Y+H ++HRD+KP N+ +++D + KI DFGLAR + T + T Y
Sbjct: 155 KGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR----HADAEMTGYVVTRWY 207
Query: 489 TAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
APE + ++ VD +S G ++ E+++G
Sbjct: 208 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTG 238
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 32/268 (11%)
Query: 327 LGEGGFGDIYKGT------LKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
LG+GGF ++ + + GKIV L R +S E+ + ++ H++++
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS---MEISIHRSLAHQHVVG 103
Query: 381 LLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G + +V E SL + ++R +L + + G YLH +
Sbjct: 104 FHGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRN--- 158
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLS 500
R+IHRD+K N+ L++DL+ KI DFGLA + E GT Y APE S
Sbjct: 159 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVLSKKGHS 217
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
+VD +S G ++ ++ G ET + YL R+ +N E P
Sbjct: 218 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYL-----RIKKN--------EYSIPKHINP 264
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEVV 588
AA + ++ Q+ +RPT++E++
Sbjct: 265 VAASLIQKM----LQTDPTARPTINELL 288
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
+++ + +GEG +G + K+ VA+KK++ + E++++ H N+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 379 IRL-----LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
I + Q ++ +V + M + L K L K L+ + RGL Y
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL---KTQHLSNDHICYFLYQILRGLKY 141
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH--LSTKFAGTLGYTAP 491
+H ++HRD+KPSN+LL+ KI DFGLAR+ + H T++ T Y AP
Sbjct: 142 IHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 492 EYAIHGQ-LSEKVDAYSFGVLVLEIIS 517
E ++ + ++ +D +S G ++ E++S
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 12/206 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L+ VA+KKL+ +T + E+ L+
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 72
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 73 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG 132
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 133 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 187
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEII 516
PE + E VD +S G ++ E++
Sbjct: 188 PEVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 128/299 (42%), Gaps = 51/299 (17%)
Query: 327 LGEGGFGDIYK----GTLKN--GKIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
LG G FG + + G +K+ VAVK L +E++++S + +H N++
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILG------------- 426
LLG C+ G +++ EY L FL KR S + I+
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFL-RRKRDSFICSKTSPAIMEDDELALDLEDLLS 165
Query: 427 ----TARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKF 482
A+G+A+L IHRD+ N+LL KI DFGLAR + +N S+ K
Sbjct: 166 FSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDI-KNDSNYVVKG 221
Query: 483 AGTL--GYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS-GTKSSETKGEEGEY--LLKRAW 537
L + APE + + + D +S+G+ + E+ S G+ + ++ ++K +
Sbjct: 222 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF 281
Query: 538 RLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSS 596
R+ L P + A ++ +I C + RPT ++V L++ S
Sbjct: 282 RM-------------LSP----EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 323
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 12/206 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L+ VA+KKL+ +T + E+ L+
Sbjct: 26 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 83
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 84 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG 143
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T + T Y A
Sbjct: 144 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 198
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEII 516
PE + E VD +S G ++ E++
Sbjct: 199 PEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 128/299 (42%), Gaps = 51/299 (17%)
Query: 327 LGEGGFGDIYK----GTLKN--GKIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
LG G FG + + G +K+ VAVK L +E++++S + +H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILG------------- 426
LLG C+ G +++ EY L FL KR S + I+
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFL-RRKRDSFICSKTSPAIMEDDELALDLEDLLS 172
Query: 427 ----TARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKF 482
A+G+A+L IHRD+ N+LL KI DFGLAR + +N S+ K
Sbjct: 173 FSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDI-KNDSNYVVKG 228
Query: 483 AGTL--GYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS-GTKSSETKGEEGEY--LLKRAW 537
L + APE + + + D +S+G+ + E+ S G+ + ++ ++K +
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF 288
Query: 538 RLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSS 596
R+ L P + A ++ +I C + RPT ++V L++ S
Sbjct: 289 RM-------------LSP----EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 330
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 24/207 (11%)
Query: 327 LGEGGFGDIY----KGTLKNG--KIVAVKKLAIGISRRT--LSDFENEVRLISNVHHRNL 378
LG G G++ + T K KI++ +K AIG +R + E E+ ++ ++H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKR-GSLNWKQRFDIILGTARGLAYLHED 437
I++ + +V E M L + G KR K F +L + YLHE+
Sbjct: 78 IKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---LAVQYLHEN 133
Query: 438 FHVRIIHRDIKPSNVLL---DDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYA 494
IIHRD+KP NVLL ++D KI DFG +++L E + L GT Y APE
Sbjct: 134 ---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYLAPEVL 188
Query: 495 IH---GQLSEKVDAYSFGVLVLEIISG 518
+ + VD +S GV++ +SG
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 128/299 (42%), Gaps = 51/299 (17%)
Query: 327 LGEGGFGDIYK----GTLKN--GKIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
LG G FG + + G +K+ VAVK L +E++++S + +H N++
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILG------------- 426
LLG C+ G +++ EY L FL KR S + I+
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFL-RRKRDSFICSKTSPAIMEDDELALDLEDLLS 167
Query: 427 ----TARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKF 482
A+G+A+L IHRD+ N+LL KI DFGLAR + +N S+ K
Sbjct: 168 FSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDI-KNDSNYVVKG 223
Query: 483 AGTL--GYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS-GTKSSETKGEEGEY--LLKRAW 537
L + APE + + + D +S+G+ + E+ S G+ + ++ ++K +
Sbjct: 224 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF 283
Query: 538 RLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLKSTSS 596
R+ L P + A ++ +I C + RPT ++V L++ S
Sbjct: 284 RM-------------LSP----EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 325
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
+++ + +GEG +G + K+ VA++K++ + E++++ H N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 379 IRL-----LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
I + Q ++ +V + M + L K L K L+ + RGL Y
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL---KTQHLSNDHICYFLYQILRGLKY 143
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH--LSTKFAGTLGYTAP 491
+H ++HRD+KPSN+LL+ KI DFGLAR+ + H T++ T Y AP
Sbjct: 144 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 492 EYAIHGQ-LSEKVDAYSFGVLVLEIIS 517
E ++ + ++ +D +S G ++ E++S
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 32/268 (11%)
Query: 327 LGEGGFGDIYKGT------LKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
LG+GGF ++ + + GKIV L R +S E+ + ++ H++++
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS---MEISIHRSLAHQHVVG 79
Query: 381 LLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G + +V E SL + ++R +L + + G YLH +
Sbjct: 80 FHGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRN--- 134
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLS 500
R+IHRD+K N+ L++DL+ KI DFGLA + E GT Y APE S
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVLSKKGHS 193
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
+VD +S G ++ ++ G ET + YL R+ +N E P
Sbjct: 194 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYL-----RIKKN--------EYSIPKHINP 240
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEVV 588
AA + ++ Q+ +RPT++E++
Sbjct: 241 VAASLIQKM----LQTDPTARPTINELL 264
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 32/268 (11%)
Query: 327 LGEGGFGDIYKGT------LKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
LG+GGF ++ + + GKIV L R +S E+ + ++ H++++
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS---MEISIHRSLAHQHVVG 105
Query: 381 LLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G + +V E SL + ++R +L + + G YLH +
Sbjct: 106 FHGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRN--- 160
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLS 500
R+IHRD+K N+ L++DL+ KI DFGLA + E GT Y APE S
Sbjct: 161 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVLSKKGHS 219
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTK 560
+VD +S G ++ ++ G ET + YL R+ +N E P
Sbjct: 220 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYL-----RIKKN--------EYSIPKHINP 266
Query: 561 EAAEKVVEIALMCTQSAANSRPTMSEVV 588
AA + ++ Q+ +RPT++E++
Sbjct: 267 VAASLIQKM----LQTDPTARPTINELL 290
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 24/207 (11%)
Query: 327 LGEGGFGDIY----KGTLKNG--KIVAVKKLAIGISRRT--LSDFENEVRLISNVHHRNL 378
LG G G++ + T K KI++ +K AIG +R + E E+ ++ ++H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKR-GSLNWKQRFDIILGTARGLAYLHED 437
I++ + +V E M L + G KR K F +L + YLHE+
Sbjct: 78 IKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---LAVQYLHEN 133
Query: 438 FHVRIIHRDIKPSNVLL---DDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYA 494
IIHRD+KP NVLL ++D KI DFG +++L E + L GT Y APE
Sbjct: 134 ---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYLAPEVL 188
Query: 495 IH---GQLSEKVDAYSFGVLVLEIISG 518
+ + VD +S GV++ +SG
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 24/207 (11%)
Query: 327 LGEGGFGDIY----KGTLKNG--KIVAVKKLAIGISRRT--LSDFENEVRLISNVHHRNL 378
LG G G++ + T K KI++ +K AIG +R + E E+ ++ ++H +
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKR-GSLNWKQRFDIILGTARGLAYLHED 437
I++ + +V E M L + G KR K F +L + YLHE+
Sbjct: 77 IKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---LAVQYLHEN 132
Query: 438 FHVRIIHRDIKPSNVLL---DDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYA 494
IIHRD+KP NVLL ++D KI DFG +++L E + L GT Y APE
Sbjct: 133 ---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYLAPEVL 187
Query: 495 IH---GQLSEKVDAYSFGVLVLEIISG 518
+ + VD +S GV++ +SG
Sbjct: 188 VSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 24/207 (11%)
Query: 327 LGEGGFGDIY----KGTLKNG--KIVAVKKLAIGISRRT--LSDFENEVRLISNVHHRNL 378
LG G G++ + T K KI++ +K AIG +R + E E+ ++ ++H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKR-GSLNWKQRFDIILGTARGLAYLHED 437
I++ + +V E M L + G KR K F +L + YLHE+
Sbjct: 78 IKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML---LAVQYLHEN 133
Query: 438 FHVRIIHRDIKPSNVLL---DDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYA 494
IIHRD+KP NVLL ++D KI DFG +++L E + L GT Y APE
Sbjct: 134 ---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYLAPEVL 188
Query: 495 IH---GQLSEKVDAYSFGVLVLEIISG 518
+ + VD +S GV++ +SG
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 24/210 (11%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSDFEN-EVRLISNVHHRNL 378
+++ +G G FG +Y+ L +G++VA+KK+ G + F+N E++++ + H N+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKA------FKNRELQIMRKLDHCNI 75
Query: 379 IRL-LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTA------RGL 431
+RL S G + VY + + + ++ R KQ +I R L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQP-KIADFGLARLLPENQSHLSTKFAGTLGYTA 490
AY+H I HRDIKP N+LLD D K+ DFG A+ L + ++S + + Y A
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRA 190
Query: 491 PEYAIHG--QLSEKVDAYSFGVLVLEIISG 518
PE I G + +D +S G ++ E++ G
Sbjct: 191 PE-LIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVA----VKKLAIGISRRTLS--DFENEVRLISNVHHRNLI 379
+LG G F + K K+ + +KK SRR +S + E EV ++ V H N+I
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L +++L+ E ++ L FL ++ SL+ ++ I G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLHTK-- 134
Query: 440 VRIIHRDIKPSNVLLDDDLQP----KIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAI 495
+I H D+KP N++L D P K+ DFGLA + E+ F GT + APE
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEFKNIF-GTPEFVAPEIVN 191
Query: 496 HGQLSEKVDAYSFGVLVLEIISG 518
+ L + D +S GV+ ++SG
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSD--FEN-EVRLISNVHHR 376
+++ +G G FG +Y+ L +G++VA+KK+ L D F+N E++++ + H
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHC 107
Query: 377 NLIRL-LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTA------R 429
N++RL S G + VY + + + ++ R KQ +I R
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP-KIADFGLARLLPENQSHLSTKFAGTLGY 488
LAY+H I HRDIKP N+LLD D K+ DFG A+ L + ++S + + Y
Sbjct: 168 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYY 222
Query: 489 TAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
APE + +D +S G ++ E++ G
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLG 253
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSD--FEN-EVRLISNVHHR 376
+++ +G G FG +Y+ L +G++VA+KK+ L D F+N E++++ + H
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHC 101
Query: 377 NLIRL-LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTA------R 429
N++RL S G + VY + + + ++ R KQ +I R
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 161
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP-KIADFGLARLLPENQSHLSTKFAGTLGY 488
LAY+H I HRDIKP N+LLD D K+ DFG A+ L + ++S + + Y
Sbjct: 162 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYY 216
Query: 489 TAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
APE + +D +S G ++ E++ G
Sbjct: 217 RAPELIFGATDYTSSIDVWSAGCVLAELLLG 247
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVA----VKKLAIGISRRTLS--DFENEVRLISNVHHRNLI 379
+LG G F + K K+ + +KK SRR +S + E EV ++ V H N+I
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L +++L+ E ++ L FL ++ SL+ ++ I G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLHTK-- 134
Query: 440 VRIIHRDIKPSNVLLDDDLQP----KIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAI 495
+I H D+KP N++L D P K+ DFGLA + E+ F GT + APE
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEFKNIF-GTPEFVAPEIVN 191
Query: 496 HGQLSEKVDAYSFGVLVLEIISG 518
+ L + D +S GV+ ++SG
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVA----VKKLAIGISRRTLS--DFENEVRLISNVHHRNLI 379
+LG G F + K K+ + +KK SRR +S + E EV ++ V H N+I
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L +++L+ E ++ L FL ++ SL+ ++ I G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLHTK-- 134
Query: 440 VRIIHRDIKPSNVLLDDDLQP----KIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAI 495
+I H D+KP N++L D P K+ DFGLA + E+ F GT + APE
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEFKNIF-GTPEFVAPEIVN 191
Query: 496 HGQLSEKVDAYSFGVLVLEIISG 518
+ L + D +S GV+ ++SG
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 24/210 (11%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSDFEN-EVRLISNVHHRNL 378
+++ +G G FG +Y+ L +G++VA+KK+ G + F+N E++++ + H N+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKA------FKNRELQIMRKLDHCNI 75
Query: 379 IRL-LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTA------RGL 431
+RL S G + VY + + + ++ R KQ +I R L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQP-KIADFGLARLLPENQSHLSTKFAGTLGYTA 490
AY+H I HRDIKP N+LLD D K+ DFG A+ L + ++S + + Y A
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRA 190
Query: 491 PEYAIHG--QLSEKVDAYSFGVLVLEIISG 518
PE I G + +D +S G ++ E++ G
Sbjct: 191 PE-LIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSD--FEN-EVRLISNVHHR 376
+++ +G G FG +Y+ L +G++VA+KK+ L D F+N E++++ + H
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHC 109
Query: 377 NLIRL-LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTA------R 429
N++RL S G + VY + + + ++ R KQ +I R
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 169
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP-KIADFGLARLLPENQSHLSTKFAGTLGY 488
LAY+H I HRDIKP N+LLD D K+ DFG A+ L + ++S + + Y
Sbjct: 170 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYY 224
Query: 489 TAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
APE + +D +S G ++ E++ G
Sbjct: 225 RAPELIFGATDYTSSIDVWSAGCVLAELLLG 255
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 87/177 (49%), Gaps = 13/177 (7%)
Query: 348 VKKLAIGISRRTLS--DFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDK 405
+KK SRR +S + E EV ++ V H N+I L +++L+ E ++ L
Sbjct: 45 IKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFD 104
Query: 406 FLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP----K 461
FL ++ SL+ ++ I G+ YLH +I H D+KP N++L D P K
Sbjct: 105 FL--AQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIK 159
Query: 462 IADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
+ DFGLA + E+ F GT + APE + L + D +S GV+ ++SG
Sbjct: 160 LIDFGLAHEI-EDGVEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 24/226 (10%)
Query: 301 TELQGPVNYRLKDLVS-ATRKFSEENKLGEGGFGDIYKGTLKN-GKIVAVKKLAIGISRR 358
TE PV+Y ++ V AT + +LG G FG++++ K G AVKK+ + + R
Sbjct: 78 TEKLKPVDYEYREEVHWATHQL----RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFR- 132
Query: 359 TLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWK 418
E+ + + ++ L G +GP + + E + SL + + +++G L +
Sbjct: 133 -----AEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV--KEQGCLP-E 184
Query: 419 QRFDIILGTA-RGLAYLHEDFHVRIIHRDIKPSNVLLDDD-LQPKIADFGLARLLPEN-- 474
R LG A GL YLH RI+H D+K NVLL D + DFG A L +
Sbjct: 185 DRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGL 241
Query: 475 -QSHLSTKF-AGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
+S L+ + GT + APE + KVD +S ++L +++G
Sbjct: 242 GKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVA----VKKLAIGISRRTLS--DFENEVRLISNVHHRNLI 379
+LG G F + K K+ + +KK SRR +S + E EV ++ V H N+I
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L +++L+ E ++ L FL ++ SL+ ++ I G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLHTK-- 134
Query: 440 VRIIHRDIKPSNVLLDDDLQP----KIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAI 495
+I H D+KP N++L D P K+ DFGLA + E+ F GT + APE
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEFKNIF-GTPEFVAPEIVN 191
Query: 496 HGQLSEKVDAYSFGVLVLEIISG 518
+ L + D +S GV+ ++SG
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSD--FEN-EVRLISNVHHR 376
+++ +G G FG +Y+ L +G++VA+KK+ L D F+N E++++ + H
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHC 111
Query: 377 NLIRL-LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTA------R 429
N++RL S G + VY + + + ++ R KQ +I R
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 171
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP-KIADFGLARLLPENQSHLSTKFAGTLGY 488
LAY+H I HRDIKP N+LLD D K+ DFG A+ L + ++S + + Y
Sbjct: 172 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYY 226
Query: 489 TAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
APE + +D +S G ++ E++ G
Sbjct: 227 RAPELIFGATDYTSSIDVWSAGCVLAELLLG 257
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 15/212 (7%)
Query: 327 LGEGGFGDIYKGTLKN------GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
LG+GGF Y+ T + GK+V L + +S E+ + ++ + +++
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS---TEIAIHKSLDNPHVVG 106
Query: 381 LLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G + +V E SL ++R ++ + + T +G+ YLH +
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTIQGVQYLHNN--- 161
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLS 500
R+IHRD+K N+ L+DD+ KI DFGLA + E GT Y APE S
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKDLCGTPNYIAPEVLCKKGHS 220
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYL 532
+VD +S G ++ ++ G ET + Y+
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPFETSCLKETYI 252
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 15/212 (7%)
Query: 327 LGEGGFGDIYKGTLKN------GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
LG+GGF Y+ T + GK+V L + +S E+ + ++ + +++
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS---TEIAIHKSLDNPHVVG 106
Query: 381 LLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G + +V E SL ++R ++ + + T +G+ YLH +
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTIQGVQYLHNN--- 161
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLS 500
R+IHRD+K N+ L+DD+ KI DFGLA + E GT Y APE S
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKXLCGTPNYIAPEVLCKKGHS 220
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYL 532
+VD +S G ++ ++ G ET + Y+
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPFETSCLKETYI 252
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 15/212 (7%)
Query: 327 LGEGGFGDIYKGTLKN------GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
LG+GGF Y+ T + GK+V L + +S E+ + ++ + +++
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS---TEIAIHKSLDNPHVVG 106
Query: 381 LLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G + +V E SL ++R ++ + + T +G+ YLH +
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTIQGVQYLHNN--- 161
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLS 500
R+IHRD+K N+ L+DD+ KI DFGLA + E GT Y APE S
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKTLCGTPNYIAPEVLCKKGHS 220
Query: 501 EKVDAYSFGVLVLEIISGTKSSETKGEEGEYL 532
+VD +S G ++ ++ G ET + Y+
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPFETSCLKETYI 252
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSD--FEN-EVRLISNVHHR 376
+++ +G G FG +Y+ L +G++VA+KK+ L D F+N E++++ + H
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHC 152
Query: 377 NLIRL-LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTA------R 429
N++RL S G + VY + + + ++ R KQ +I R
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 212
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP-KIADFGLARLLPENQSHLSTKFAGTLGY 488
LAY+H I HRDIKP N+LLD D K+ DFG A+ L + ++S + + Y
Sbjct: 213 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYY 267
Query: 489 TAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
APE + +D +S G ++ E++ G
Sbjct: 268 RAPELIFGATDYTSSIDVWSAGCVLAELLLG 298
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 26/211 (12%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSD--FEN-EVRLISNVHHR 376
+++ +G G FG +Y+ L +G++VA+KK+ L D F+N E++++ + H
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHC 78
Query: 377 NLIRL-LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTA------R 429
N++RL S G + VY + + + ++ R KQ +I R
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 138
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP-KIADFGLARLLPENQSHLSTKFAGTLGY 488
LAY+H I HRDIKP N+LLD D K+ DFG A+ L + ++S + + Y
Sbjct: 139 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYY 193
Query: 489 TAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
APE + +D +S G ++ E++ G
Sbjct: 194 RAPELIFGATDYTSSIDVWSAGCVLAELLLG 224
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 327 LGEGGFGDIYKGTLKN------GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIR 380
LG+GGF Y+ T + GK+V L + +S E+ + ++ + +++
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS---TEIAIHKSLDNPHVVG 90
Query: 381 LLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHV 440
G + +V E SL ++R ++ + + T +G+ YLH +
Sbjct: 91 FHGFFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTIQGVQYLHNN--- 145
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLS 500
R+IHRD+K N+ L+DD+ KI DFGLA + E GT Y APE S
Sbjct: 146 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKDLCGTPNYIAPEVLCKKGHS 204
Query: 501 EKVDAYSFGVLVLEIISGTKSSET 524
+VD +S G ++ ++ G ET
Sbjct: 205 FEVDIWSLGCILYTLLVGKPPFET 228
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 18/184 (9%)
Query: 344 KIVAVKKLAIGISRRT--LSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANS 401
+I++ +K AIG +R + E E+ ++ ++H +I++ + +V E M
Sbjct: 180 RIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGG 238
Query: 402 SLDKFLFGEKR-GSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLL---DDD 457
L + G KR K F +L + YLHE+ IIHRD+KP NVLL ++D
Sbjct: 239 ELFDKVVGNKRLKEATCKLYFYQML---LAVQYLHEN---GIIHRDLKPENVLLSSQEED 292
Query: 458 LQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIH---GQLSEKVDAYSFGVLVLE 514
KI DFG +++L E + L GT Y APE + + VD +S GV++
Sbjct: 293 CLIKITDFGHSKILGE--TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFI 350
Query: 515 IISG 518
+SG
Sbjct: 351 CLSG 354
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 18/184 (9%)
Query: 344 KIVAVKKLAIGISRRT--LSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANS 401
+I++ +K AIG +R + E E+ ++ ++H +I++ + +V E M
Sbjct: 166 RIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGG 224
Query: 402 SLDKFLFGEKR-GSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLL---DDD 457
L + G KR K F +L + YLHE+ IIHRD+KP NVLL ++D
Sbjct: 225 ELFDKVVGNKRLKEATCKLYFYQML---LAVQYLHEN---GIIHRDLKPENVLLSSQEED 278
Query: 458 LQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIH---GQLSEKVDAYSFGVLVLE 514
KI DFG +++L E + L GT Y APE + + VD +S GV++
Sbjct: 279 CLIKITDFGHSKILGE--TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFI 336
Query: 515 IISG 518
+SG
Sbjct: 337 CLSG 340
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 101/227 (44%), Gaps = 18/227 (7%)
Query: 327 LGEGGFGDIYKGTLKNGKIV-AVKKL---AIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+G+G FG + K ++ AVK L AI + L+ NV H L+ L
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 105
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
+L V +Y+ L L E R L + RF A L YLH + I
Sbjct: 106 FSFQTADKLYFVLDYINGGELFYHLQRE-RCFLEPRARF-YAAEIASALGYLHS---LNI 160
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLST--KFAGTLGYTAPEYAIHGQLS 500
++RD+KP N+LLD + DFGL + EN H ST F GT Y APE +H Q
Sbjct: 161 VYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGTPEYLAPE-VLHKQPY 216
Query: 501 EK-VDAYSFGVLVLEIISGTKS--SETKGEEGEYLLKRAWRLYENGT 544
++ VD + G ++ E++ G S E + +L + +L N T
Sbjct: 217 DRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNIT 263
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVA----VKKLAIGISRRTL--SDFENEVRLISNVHHRNLI 379
+LG G F + K K+ + +KK SRR + + E EV ++ V H N+I
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNII 78
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L +++L+ E ++ L F F ++ SL+ ++ I G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGEL--FDFLAQKESLSEEEATSFIKQILDGVNYLHTK-- 134
Query: 440 VRIIHRDIKPSNVLLDDDLQP----KIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAI 495
+I H D+KP N++L D P K+ DFGLA + E+ F GT + APE
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEFKNIF-GTPEFVAPEIVN 191
Query: 496 HGQLSEKVDAYSFGVLVLEIISG 518
+ L + D +S GV+ ++SG
Sbjct: 192 YEPLGLEADMWSIGVITYILLSG 214
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 105/212 (49%), Gaps = 28/212 (13%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSD--FEN-EVRLISNVHHR 376
+++ +G G FG +Y+ L +G++VA+KK+ L D F+N E++++ + H
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHC 86
Query: 377 NLIRL-LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTA------R 429
N++RL S G + VY + + + ++ R KQ +I R
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 146
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP-KIADFGLARLLPENQSHLSTKFAGTLGY 488
LAY+H I HRDIKP N+LLD D K+ DFG A+ L + ++S + + Y
Sbjct: 147 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYY 201
Query: 489 TAPEYAIHG--QLSEKVDAYSFGVLVLEIISG 518
APE I G + +D +S G ++ E++ G
Sbjct: 202 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLG 232
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 22/225 (9%)
Query: 301 TELQGPVNYRLKDLVSATRKFSEENKLGEGGFGDIYKGTLKN-GKIVAVKKLAIGISRRT 359
TE PV+Y ++ V + + +LG G FG++++ K G AVKK+ + + R
Sbjct: 57 TEKLKPVDYEYREEV---HWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV- 112
Query: 360 LSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQ 419
E+ + + ++ L G +GP + + E + SL + + ++ G L +
Sbjct: 113 -----EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--KQMGCLP-ED 164
Query: 420 RFDIILGTA-RGLAYLHEDFHVRIIHRDIKPSNVLLDDD-LQPKIADFGLARLLPEN--- 474
R LG A GL YLH RI+H D+K NVLL D + + DFG A L +
Sbjct: 165 RALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 221
Query: 475 QSHLSTKF-AGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
+S L+ + GT + APE + KVD +S ++L +++G
Sbjct: 222 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 15/208 (7%)
Query: 318 TRKFSEENKLGEGGFGDIYKGT--LKNGKIVA--VKKLAI----GISRRTLSDFENEVRL 369
++K+S + LG G FG ++ KN ++V +KK + I L E+ +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
+S V H N+I++L LV E S LD F F ++ L+ I
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVME-KHGSGLDLFAFIDRHPRLDEPLASYIFRQLVS 141
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYT 489
+ YL IIHRDIK N+++ +D K+ DFG A L + L F GT+ Y
Sbjct: 142 AVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYL--ERGKLFYTFCGTIEYC 196
Query: 490 APEYAIHGQL-SEKVDAYSFGVLVLEII 516
APE + +++ +S GV + ++
Sbjct: 197 APEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 105/212 (49%), Gaps = 28/212 (13%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSD--FEN-EVRLISNVHHR 376
+++ +G G FG +Y+ L +G++VA+KK+ L D F+N E++++ + H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHC 73
Query: 377 NLIRL-LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTA------R 429
N++RL S G + +VY + + + ++ R KQ +I R
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP-KIADFGLARLLPENQSHLSTKFAGTLGY 488
LAY+H I HRDIKP N+LLD D K+ DFG A+ L + ++S + Y
Sbjct: 134 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYY 188
Query: 489 TAPEYAIHG--QLSEKVDAYSFGVLVLEIISG 518
APE I G + +D +S G ++ E++ G
Sbjct: 189 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%), Gaps = 10/196 (5%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
+LG G FG +++ T + K + E++ +S + H L+ L
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
E++++YE+M+ L + + ++ ++ + + + +GL ++HE+ +V H
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV---HL 279
Query: 446 DIKPSNVLLDDDL--QPKIADFGL-ARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEK 502
D+KP N++ + K+ DFGL A L P+ ++T GT + APE A +
Sbjct: 280 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYY 336
Query: 503 VDAYSFGVLVLEIISG 518
D +S GVL ++SG
Sbjct: 337 TDMWSVGVLSYILLSG 352
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 26/211 (12%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSD--FEN-EVRLISNVHHR 376
+++ +G G FG +Y+ L +G++VA+KK+ L D F+N E++++ + H
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHC 107
Query: 377 NLIRL-LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTA------R 429
N++RL S G + VY + + + ++ R KQ +I R
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP-KIADFGLARLLPENQSHLSTKFAGTLGY 488
LAY+H I HRDIKP N+LLD D K+ DFG A+ L + ++S + Y
Sbjct: 168 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYY 222
Query: 489 TAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
APE + +D +S G ++ E++ G
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLG 253
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%), Gaps = 10/196 (5%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
+LG G FG +++ T + K + E++ +S + H L+ L
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 386 SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
E++++YE+M+ L + + ++ ++ + + + +GL ++HE+ +V H
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV---HL 173
Query: 446 DIKPSNVLLDDDL--QPKIADFGL-ARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEK 502
D+KP N++ + K+ DFGL A L P+ ++T GT + APE A +
Sbjct: 174 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYY 230
Query: 503 VDAYSFGVLVLEIISG 518
D +S GVL ++SG
Sbjct: 231 TDMWSVGVLSYILLSG 246
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 131/310 (42%), Gaps = 34/310 (10%)
Query: 305 GPVNYRLKDLVSATRKFSEE----NKLGEGGFGDIYKGTLKN------GKIVAVKKLAIG 354
G N + + + TR F+++ +LG+G F + + K KI+ KKL
Sbjct: 14 GTENLYFQXMATCTR-FTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKL--- 69
Query: 355 ISRRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGS 414
S R E E R+ + H N++RL S+ LV++ + L + + R
Sbjct: 70 -SARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA--REY 126
Query: 415 LNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQ---PKIADFGLA-RL 470
+ I + ++H+ I+HRD+KP N+LL + K+ADFGLA +
Sbjct: 127 YSEADASHCIHQILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEV 183
Query: 471 LPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGE 530
E Q+ FAGT GY +PE + VD ++ GV++ ++ G + +
Sbjct: 184 QGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKL 241
Query: 531 YLLKRAWRLYENGTHWE--------LMDESLDPNECTKEAAEKVVEIALMCTQSAANSRP 582
Y +A W+ L+++ L N + A++ ++ +C +S S
Sbjct: 242 YQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWVCQRSTVASMM 301
Query: 583 TMSEVVALLK 592
E V L+
Sbjct: 302 HRQETVECLR 311
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 105/212 (49%), Gaps = 28/212 (13%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSD--FEN-EVRLISNVHHR 376
+++ +G G FG +Y+ L +G++VA+KK+ L D F+N E++++ + H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHC 73
Query: 377 NLIRL-LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTA------R 429
N++RL S G + VY + + + ++ R KQ +I R
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP-KIADFGLARLLPENQSHLSTKFAGTLGY 488
LAY+H I HRDIKP N+LLD D K+ DFG A+ L + ++S + + Y
Sbjct: 134 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYY 188
Query: 489 TAPEYAIHG--QLSEKVDAYSFGVLVLEIISG 518
APE I G + +D +S G ++ E++ G
Sbjct: 189 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSDFEN-EVRLISNVHHRNL 378
+++ +G G FG +Y+ L +G++VA+KK+ G + F+N E++++ + H N+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKA------FKNRELQIMRKLDHCNI 75
Query: 379 IRL-LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTA------RGL 431
+RL S G + VY + + ++ R KQ +I R L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQP-KIADFGLARLLPENQSHLSTKFAGTLGYTA 490
AY+H I HRDIKP N+LLD D K+ DFG A+ L + ++S + Y A
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRA 190
Query: 491 PEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
PE + +D +S G ++ E++ G
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 108/226 (47%), Gaps = 24/226 (10%)
Query: 301 TELQGPVNYRLKDLVS-ATRKFSEENKLGEGGFGDIYKGTLKN-GKIVAVKKLAIGISRR 358
TE PV+Y ++ V AT + +LG G FG++++ K G AVKK+ + + R
Sbjct: 59 TEKLKPVDYEYREEVHWATHQL----RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFR- 113
Query: 359 TLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWK 418
E+ + + ++ L G +GP + + E + SL + + +++G L +
Sbjct: 114 -----AEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV--KEQGCLP-E 165
Query: 419 QRFDIILGTA-RGLAYLHEDFHVRIIHRDIKPSNVLLDDD-LQPKIADFGLARLLPEN-- 474
R LG A GL YLH RI+H D+K NVLL D + DFG A L +
Sbjct: 166 DRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGL 222
Query: 475 -QSHLSTKF-AGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
+ L+ + GT + APE + KVD +S ++L +++G
Sbjct: 223 GKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 111/235 (47%), Gaps = 35/235 (14%)
Query: 320 KFSEENKLGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDFE-NEVRLISNVHHRN 377
K+ + K+G+G FG+++K K G+ VA+KK+ + + E++++ + H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 378 LIRLLGCCSQGPE--------LILVYEY-------MANSSLDKFLFGEKRGSLNWKQRFD 422
++ L+ C + LV+++ + ++ L KF E K+
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE------IKRVMQ 132
Query: 423 IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLAR---LLPENQSHLS 479
++L GL Y+H + +I+HRD+K +NVL+ D K+ADFGLAR L +Q +
Sbjct: 133 MLLN---GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 480 TKFAGTLGYTAPEYAI-HGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLL 533
TL Y PE + +D + G ++ E+ T+S +G ++ L
Sbjct: 187 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM--WTRSPIMQGNTEQHQL 239
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 365 NEVRLISNVH-HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDI 423
EV ++ V H N+I+L LV++ M L +L ++ +L+ K+ I
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKI 129
Query: 424 ILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA 483
+ + LH+ + I+HRD+KP N+LLDDD+ K+ DFG + L + S
Sbjct: 130 MRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSV--C 184
Query: 484 GTLGYTAPEYAI------HGQLSEKVDAYSFGVLVLEIISGT 519
GT Y APE H ++VD +S GV++ +++G+
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 226
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 22/225 (9%)
Query: 301 TELQGPVNYRLKDLVSATRKFSEENKLGEGGFGDIYKGTLKN-GKIVAVKKLAIGISRRT 359
TE PV+Y ++ V + + ++G G FG++++ K G AVKK+ + + R
Sbjct: 43 TEKLKPVDYEYREEV---HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV- 98
Query: 360 LSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQ 419
E+ + + ++ L G +GP + + E + SL + + ++ G L +
Sbjct: 99 -----EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--KQMGCLP-ED 150
Query: 420 RFDIILGTA-RGLAYLHEDFHVRIIHRDIKPSNVLLDDD-LQPKIADFGLARLLPEN--- 474
R LG A GL YLH RI+H D+K NVLL D + + DFG A L +
Sbjct: 151 RALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207
Query: 475 QSHLSTKF-AGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
+S L+ + GT + APE + KVD +S ++L +++G
Sbjct: 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 29/208 (13%)
Query: 325 NKLGEGGFGDIYK------GTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
+LG+G F + + G KI+ KKL S R E E R+ + H N+
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKL----SARDHQKLEREARICRLLKHPNI 83
Query: 379 IRLLGCCSQGPELILVYEYMANSSL-----DKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
+RL S+ L+++ + L + + E S +Q + +L +
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL-------H 136
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQ---PKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
H+ + ++HRD+KP N+LL L+ K+ADFGLA + E + FAGT GY +
Sbjct: 137 CHQ---MGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLS 192
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISG 518
PE + VD ++ GV++ ++ G
Sbjct: 193 PEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 22/225 (9%)
Query: 301 TELQGPVNYRLKDLVSATRKFSEENKLGEGGFGDIYKGTLKN-GKIVAVKKLAIGISRRT 359
TE PV+Y ++ V + + ++G G FG++++ K G AVKK+ + + R
Sbjct: 59 TEKLKPVDYEYREEV---HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV- 114
Query: 360 LSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQ 419
E+ + + ++ L G +GP + + E + SL + + ++ G L +
Sbjct: 115 -----EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--KQMGCLP-ED 166
Query: 420 RFDIILGTA-RGLAYLHEDFHVRIIHRDIKPSNVLLDDD-LQPKIADFGLARLLPEN--- 474
R LG A GL YLH RI+H D+K NVLL D + + DFG A L +
Sbjct: 167 RALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 223
Query: 475 QSHLSTKF-AGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
+S L+ + GT + APE + KVD +S ++L +++G
Sbjct: 224 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 108/228 (47%), Gaps = 36/228 (15%)
Query: 316 SATRKFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDF-ENEVRLISNVH 374
+ R+ + +G+G +G++++G L +G+ VAVK + SR S F E E+ +
Sbjct: 5 TVARQVALVECVGKGRYGEVWRG-LWHGESVAVKIFS---SRDEQSWFRETEIYNTVLLR 60
Query: 375 HRNLIRLLGC----CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
H N++ + + +L L+ Y + SL FL +R +L + + A G
Sbjct: 61 HDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFL---QRQTLEPHLALRLAVSAACG 117
Query: 431 LAYLH-EDFHVR----IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHL---STKF 482
LA+LH E F + I HRD K NVL+ +LQ IAD GLA + + +L +
Sbjct: 118 LAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPR 177
Query: 483 AGTLGYTAPEYAIHGQLSEKV-----------DAYSFGVLVLEIISGT 519
GT Y APE L E++ D ++FG+++ EI T
Sbjct: 178 VGTKRYMAPEV-----LDEQIRTDCFESYKWTDIWAFGLVLWEIARRT 220
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 26/211 (12%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSD--FEN-EVRLISNVHHR 376
+++ +G G FG +Y+ L +G++VA+KK+ L D F+N E++++ + H
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHC 85
Query: 377 NLIRL-LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTA------R 429
N++RL S G + VY + + + ++ R KQ +I R
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP-KIADFGLARLLPENQSHLSTKFAGTLGY 488
LAY+H I HRDIKP N+LLD D K+ DFG A+ L + ++S + Y
Sbjct: 146 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYY 200
Query: 489 TAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
APE + +D +S G ++ E++ G
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLG 231
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 26/211 (12%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSD--FEN-EVRLISNVHHR 376
+++ +G G FG +Y+ L +G++VA+KK+ L D F+N E++++ + H
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHC 81
Query: 377 NLIRL-LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTA------R 429
N++RL S G + VY + + + ++ R KQ +I R
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 141
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP-KIADFGLARLLPENQSHLSTKFAGTLGY 488
LAY+H I HRDIKP N+LLD D K+ DFG A+ L + ++S + Y
Sbjct: 142 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYY 196
Query: 489 TAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
APE + +D +S G ++ E++ G
Sbjct: 197 RAPELIFGATDYTSSIDVWSAGCVLAELLLG 227
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 24/207 (11%)
Query: 326 KLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLIS-NVHHRN-----L 378
++G G +G + K K +G+I+AVK++ R T+ + E + L+ +V R+ +
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRI-----RSTVDEKEQKQLLMDLDVVMRSSDCPYI 83
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKF---LFGEKRGSLNWKQRFDIILGTARGLAYLH 435
++ G + + + E M+ +S DKF ++ + + I L T + L +L
Sbjct: 84 VQFYGALFREGDCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK 142
Query: 436 EDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY-- 493
E+ ++IIHRDIKPSN+LLD K+ DFG++ L + S T+ AG Y APE
Sbjct: 143 EN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD--SIAKTRDAGCRPYMAPERID 198
Query: 494 --AIHGQLSEKVDAYSFGVLVLEIISG 518
A + D +S G+ + E+ +G
Sbjct: 199 PSASRQGYDVRSDVWSLGITLYELATG 225
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 26/211 (12%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSD--FEN-EVRLISNVHHR 376
+++ +G G FG +Y+ L +G++VA+KK+ L D F+N E++++ + H
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHC 92
Query: 377 NLIRL-LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTA------R 429
N++RL S G + VY + + + ++ R KQ +I R
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 152
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP-KIADFGLARLLPENQSHLSTKFAGTLGY 488
LAY+H I HRDIKP N+LLD D K+ DFG A+ L + ++S + Y
Sbjct: 153 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYY 207
Query: 489 TAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
APE + +D +S G ++ E++ G
Sbjct: 208 RAPELIFGATDYTSSIDVWSAGCVLAELLLG 238
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 26/211 (12%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSD--FEN-EVRLISNVHHR 376
+++ +G G FG +Y+ L +G++VA+KK+ L D F+N E++++ + H
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHC 85
Query: 377 NLIRL-LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTA------R 429
N++RL S G + VY + + + ++ R KQ +I R
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP-KIADFGLARLLPENQSHLSTKFAGTLGY 488
LAY+H I HRDIKP N+LLD D K+ DFG A+ L + ++S + Y
Sbjct: 146 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYY 200
Query: 489 TAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
APE + +D +S G ++ E++ G
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLG 231
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 135/321 (42%), Gaps = 56/321 (17%)
Query: 310 RLKDLVSATRKFSEENKLGEGGFGDIYKGTLK--NGKIV--AVKKL-AIGISRRTLSDFE 364
+L+D++ ++F+ LG+G FG + + LK +G V AVK L A I+ + +F
Sbjct: 14 KLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFL 73
Query: 365 NEVRLISNVHHRNLIRLLGCCSQG------PELILVYEYMANSSLDKFLF----GEKRGS 414
E + H ++ +L+G + P +++ +M + L FL GE +
Sbjct: 74 REAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFN 133
Query: 415 LNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPEN 474
L + ++ A G+ YL IHRD+ N +L +D+ +ADFGL+R +
Sbjct: 134 LPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSG 190
Query: 475 Q-------SHLSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
S L K+ Y +H D ++FGV + EI++ ++ E
Sbjct: 191 DYYRQGCASKLPVKWLALESLADNLYTVHS------DVWAFGVTMWEIMTRGQTPYAGIE 244
Query: 528 EGE---YLLKRAWRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTM 584
E YL+ G + P EC E+V ++ C + RP+
Sbjct: 245 NAEIYNYLI--------GGNRLK------QPPECM----EEVYDLMYQCWSADPKQRPSF 286
Query: 585 SEVVALLKSTSSSLLGNKPLL 605
+ L+ ++LG+ +L
Sbjct: 287 T----CLRMELENILGHLSVL 303
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 16/207 (7%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
+++ + +GEG +G + K+ VA+KK++ + E++++ H N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 379 IRL-----LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
I + Q ++ +V + M + L K L K L+ + RGL Y
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL---KTQHLSNDHICYFLYQILRGLKY 143
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH--LSTKFAGTLGYTAP 491
+H ++HRD+KPSN+LL+ KI DFGLAR+ + H + T Y AP
Sbjct: 144 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 200
Query: 492 EYAIHGQ-LSEKVDAYSFGVLVLEIIS 517
E ++ + ++ +D +S G ++ E++S
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 16/207 (7%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
+++ + +GEG +G + K+ VA+KK++ + E++++ H N+
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 379 IRL-----LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
I + Q ++ +V + M + L K L K L+ + RGL Y
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLL---KTQHLSNDHICYFLYQILRGLKY 144
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH--LSTKFAGTLGYTAP 491
+H ++HRD+KPSN+LL+ KI DFGLAR+ + H + T Y AP
Sbjct: 145 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 201
Query: 492 EYAIHGQ-LSEKVDAYSFGVLVLEIIS 517
E ++ + ++ +D +S G ++ E++S
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 365 NEVRLISNVH-HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDI 423
EV ++ V H N+I+L LV++ M L +L ++ +L+ K+ I
Sbjct: 59 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKI 116
Query: 424 ILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA 483
+ + LH+ + I+HRD+KP N+LLDDD+ K+ DFG + L + +
Sbjct: 117 MRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVC 171
Query: 484 GTLGYTAPEYAI------HGQLSEKVDAYSFGVLVLEIISGT 519
GT Y APE H ++VD +S GV++ +++G+
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 213
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 111/235 (47%), Gaps = 35/235 (14%)
Query: 320 KFSEENKLGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDFE-NEVRLISNVHHRN 377
K+ + K+G+G FG+++K K G+ VA+KK+ + + E++++ + H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 378 LIRLLGCCSQGPE--------LILVYEY-------MANSSLDKFLFGEKRGSLNWKQRFD 422
++ L+ C + LV+++ + ++ L KF E K+
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEI------KRVMQ 132
Query: 423 IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLAR---LLPENQSHLS 479
++L GL Y+H + +I+HRD+K +NVL+ D K+ADFGLAR L +Q +
Sbjct: 133 MLLN---GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 480 TKFAGTLGYTAPEYAI-HGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLL 533
TL Y PE + +D + G ++ E+ T+S +G ++ L
Sbjct: 187 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM--WTRSPIMQGNTEQHQL 239
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 32/220 (14%)
Query: 327 LGEGGFGDIYKGTL----KNGKI--VAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
LG G FG + T K G VAVK L +E+++++ + H N++
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 380 RLLGCCSQGPELILVYEYMANSSLDKFL------FGEKRGSLNWKQR-----------FD 422
LLG C+ + L++EY L +L F E ++R F+
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172
Query: 423 IIL----GTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHL 478
+L A+G+ +L +HRD+ NVL+ KI DFGLAR + + +++
Sbjct: 173 DLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 229
Query: 479 STKFAGT-LGYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS 517
A + + APE G + K D +S+G+L+ EI S
Sbjct: 230 VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 320 KFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHR 376
++++ +GEG +G + Y K VA+KK++ + E++++ H
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTR--VAIKKISPFEHQTYCQRTLREIQILLRFRHE 101
Query: 377 NLI----RLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLA 432
N+I L + + + + + + L K L K L+ + RGL
Sbjct: 102 NVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLL---KSQQLSNDHICYFLYQILRGLK 158
Query: 433 YLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSH--LSTKFAGTLGYTA 490
Y+H ++HRD+KPSN+L++ KI DFGLAR+ H T+ T Y A
Sbjct: 159 YIHS---ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRA 215
Query: 491 PEYAIHGQ-LSEKVDAYSFGVLVLEIIS 517
PE ++ + ++ +D +S G ++ E++S
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 365 NEVRLISNVH-HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDI 423
EV ++ V H N+I+L LV++ M L +L ++ +L+ K+ I
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKI 129
Query: 424 ILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA 483
+ + LH+ + I+HRD+KP N+LLDDD+ K+ DFG + L + +
Sbjct: 130 MRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVC 184
Query: 484 GTLGYTAPEYAI------HGQLSEKVDAYSFGVLVLEIISGT 519
GT Y APE H ++VD +S GV++ +++G+
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 226
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 28/212 (13%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSD--FEN-EVRLISNVHHR 376
+++ +G G FG +Y+ L +G++VA+KK+ L D F+N E++++ + H
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHC 74
Query: 377 NLIRL-LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTA------R 429
N++RL S G + VY + + + ++ R KQ +I R
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 134
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP-KIADFGLARLLPENQSHLSTKFAGTLGY 488
LAY+H I HRDIKP N+LLD D K+ DFG A+ L + ++S + Y
Sbjct: 135 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYY 189
Query: 489 TAPEYAIHG--QLSEKVDAYSFGVLVLEIISG 518
APE I G + +D +S G ++ E++ G
Sbjct: 190 RAPE-LIFGATDYTSSIDVWSAGCVLAELLLG 220
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 26/211 (12%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSD--FEN-EVRLISNVHHR 376
+++ +G G FG +Y+ L +G++VA+KK+ L D F+N E++++ + H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHC 73
Query: 377 NLIRL-LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTA------R 429
N++RL S G + VY + + + ++ R KQ +I R
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP-KIADFGLARLLPENQSHLSTKFAGTLGY 488
LAY+H I HRDIKP N+LLD D K+ DFG A+ L + ++S + Y
Sbjct: 134 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYY 188
Query: 489 TAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
APE + +D +S G ++ E++ G
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 26/211 (12%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSD--FEN-EVRLISNVHHR 376
+++ +G G FG +Y+ L +G++VA+KK+ L D F+N E++++ + H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHC 73
Query: 377 NLIRL-LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTA------R 429
N++RL S G + VY + + + ++ R KQ +I R
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP-KIADFGLARLLPENQSHLSTKFAGTLGY 488
LAY+H I HRDIKP N+LLD D K+ DFG A+ L + ++S + Y
Sbjct: 134 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYY 188
Query: 489 TAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
APE + +D +S G ++ E++ G
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 29/214 (13%)
Query: 327 LGEGGFGDI---YKGTLKNGKIVAVKKLAIG--ISRRTLSDFENEVRLISNVHHRNLIRL 381
+G+G FG + K K K+ A+K + + R + + E++++ + H L+ L
Sbjct: 23 IGKGSFGKVCIVQKNDTK--KMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL 80
Query: 382 LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFD------IILGTARGLAYLH 435
++ +V +D L G+ R L F I L YL
Sbjct: 81 WYSFQDEEDMFMV--------VDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQ 132
Query: 436 EDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAI 495
RIIHRD+KP N+LLD+ I DF +A +LP ++ ++T AGT Y APE
Sbjct: 133 NQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR-ETQITT-MAGTKPYMAPEMFS 187
Query: 496 HGQ---LSEKVDAYSFGVLVLEIISGTKSSETKG 526
+ S VD +S GV E++ G + +
Sbjct: 188 SRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRS 221
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 26/211 (12%)
Query: 321 FSEENKLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSD--FEN-EVRLISNVHHR 376
+++ +G G FG +Y+ L +G++VA+KK+ L D F+N E++++ + H
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHC 77
Query: 377 NLIRL-LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTA------R 429
N++RL S G + VY + + + ++ R KQ +I R
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 137
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP-KIADFGLARLLPENQSHLSTKFAGTLGY 488
LAY+H I HRDIKP N+LLD D K+ DFG A+ L + ++S + Y
Sbjct: 138 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYY 192
Query: 489 TAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
APE + +D +S G ++ E++ G
Sbjct: 193 RAPELIFGATDYTSSIDVWSAGCVLAELLLG 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 111/235 (47%), Gaps = 35/235 (14%)
Query: 320 KFSEENKLGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDFE-NEVRLISNVHHRN 377
K+ + K+G+G FG+++K K G+ VA+KK+ + + E++++ + H N
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 378 LIRLLGCCSQGPE--------LILVYEY-------MANSSLDKFLFGEKRGSLNWKQRFD 422
++ L+ C + LV+++ + ++ L KF E K+
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI------KRVMQ 131
Query: 423 IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLAR---LLPENQSHLS 479
++L GL Y+H + +I+HRD+K +NVL+ D K+ADFGLAR L +Q +
Sbjct: 132 MLLN---GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 185
Query: 480 TKFAGTLGYTAPEYAI-HGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLL 533
TL Y PE + +D + G ++ E+ T+S +G ++ L
Sbjct: 186 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM--WTRSPIMQGNTEQHQL 238
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 111/235 (47%), Gaps = 35/235 (14%)
Query: 320 KFSEENKLGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDFE-NEVRLISNVHHRN 377
K+ + K+G+G FG+++K K G+ VA+KK+ + + E++++ + H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 378 LIRLLGCCSQGPE--------LILVYEY-------MANSSLDKFLFGEKRGSLNWKQRFD 422
++ L+ C + LV+++ + ++ L KF E K+
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI------KRVMQ 132
Query: 423 IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLAR---LLPENQSHLS 479
++L GL Y+H + +I+HRD+K +NVL+ D K+ADFGLAR L +Q +
Sbjct: 133 MLLN---GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 480 TKFAGTLGYTAPEYAI-HGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLL 533
TL Y PE + +D + G ++ E+ T+S +G ++ L
Sbjct: 187 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM--WTRSPIMQGNTEQHQL 239
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 124/299 (41%), Gaps = 37/299 (12%)
Query: 316 SATRKFSEENKLGEGGFGDIYK------GTLKNGKIVAVKKLAIGISRRTLSDFENEVRL 369
S T ++ +G+G F + + G KI+ KKL S R E E R+
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKL----SARDHQKLEREARI 56
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSL-----DKFLFGEKRGSLNWKQRFDII 424
+ H N++RL S+ LV++ + L + + E S +Q + +
Sbjct: 57 CRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV 116
Query: 425 LGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQ---PKIADFGLARLLPENQSHLSTK 481
L + H+ + ++HRD+KP N+LL + K+ADFGLA + +Q
Sbjct: 117 L-------HCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG- 165
Query: 482 FAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYE 541
FAGT GY +PE + VD ++ GV++ ++ G + + Y +A
Sbjct: 166 FAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDF 225
Query: 542 NGTHWE--------LMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLK 592
W+ L+++ L N + A + ++ +C +S S E V LK
Sbjct: 226 PSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECLK 284
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 83/160 (51%), Gaps = 19/160 (11%)
Query: 362 DFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSL---DKFLFGEKRGS---L 415
DF+NE+++I+++ + + G + E+ ++YEYM N S+ D++ F + +
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 416 NWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQ 475
+ II +Y+H + I HRD+KPSN+L+D + + K++DFG + + + +
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKK 206
Query: 476 SHLSTKFAGTLGYTAPEY-----AIHGQLSEKVDAYSFGV 510
S GT + PE+ + +G KVD +S G+
Sbjct: 207 IKGS---RGTYEFMPPEFFSNESSYNGA---KVDIWSLGI 240
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 16/199 (8%)
Query: 326 KLGEGGFGDIYKGTLK-NGKIVAVKKL--AIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
+LG G FG +++ K G++ K + + + T+ +NE+ +++ +HH LI L
Sbjct: 58 ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTV---KNEISIMNQLHHPKLINLH 114
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
E++L+ E+++ L + E ++ + + + GL ++HE I
Sbjct: 115 DAFEDKYEMVLILEFLSGGELFDRIAAEDY-KMSEAEVINYMRQACEGLKHMHEH---SI 170
Query: 443 IHRDIKPSNVLLDDDLQP--KIADFGLA-RLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
+H DIKP N++ + KI DFGLA +L P+ ++T T + APE +
Sbjct: 171 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIVDREPV 227
Query: 500 SEKVDAYSFGVLVLEIISG 518
D ++ GVL ++SG
Sbjct: 228 GFYTDMWAIGVLGYVLLSG 246
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 327 LGEGGFGDIY----KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
LG+G FG + KGT + I +KK + I + E R+++ + + L
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVV-IQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 383 GCCSQGPE-LILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVR 441
C Q + L V EY+ L + ++ G Q + GL +LH+
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLMYHI--QQVGKFKEPQAVFYAAEISIGLFFLHKR---G 140
Query: 442 IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHL-----STKFAGTLGYTAPEYAIH 496
II+RD+K NV+LD + KIADFG+ + H+ + +F GT Y APE +
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCK------EHMMDGVTTREFCGTPDYIAPEIIAY 194
Query: 497 GQLSEKVDAYSFGVLVLEIISGTKSSETKGEE 528
+ VD +++GVL+ E+++G + + E+
Sbjct: 195 QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED 226
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 102/222 (45%), Gaps = 34/222 (15%)
Query: 315 VSATRKFSEE----NKLGEGGFGDIYK------GTLKNGKIVAVKKLAIGISRRTLSDFE 364
++ TR F+EE +LG+G F + + G I+ KKL S R E
Sbjct: 4 ITCTR-FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL----SARDHQKLE 58
Query: 365 NEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSL-----DKFLFGEKRGSLNWKQ 419
E R+ + H N++RL S+ L+++ + L + + E S +Q
Sbjct: 59 REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQ 118
Query: 420 RFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQ---PKIADFGLARLLPENQS 476
+ +L + H+ + ++HR++KP N+LL L+ K+ADFGLA + E +
Sbjct: 119 ILEAVL-------HCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQ 167
Query: 477 HLSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
FAGT GY +PE + VD ++ GV++ ++ G
Sbjct: 168 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L+ VA+KKL+ +T + E+ L+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG 138
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T Y A
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRYYRA 193
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEII 516
PE + E VD +S G ++ E++
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 41/212 (19%)
Query: 326 KLGEGGFGDIYKGT-LKNGKIVAVKKLAIGIS----RRTLSDFENEVRLISNVHHRNLIR 380
+LG G +G + K + +G+I+AVK++ ++ +R L D + +R V +
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR---TVDCPFTVT 114
Query: 381 LLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFD------------IILGTA 428
G + ++ + E M ++SLDKF +KQ D I +
Sbjct: 115 FYGALFREGDVWICMELM-DTSLDKF----------YKQVIDKGQTIPEDILGKIAVSIV 163
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
+ L +LH V IHRD+KPSNVL++ Q K+ DFG++ L ++ + T AG Y
Sbjct: 164 KALEHLHSKLSV--IHRDVKPSNVLINALGQVKMCDFGISGYLVDSVA--KTIDAGCKPY 219
Query: 489 TAPEYAIHGQLSE-----KVDAYSFGVLVLEI 515
APE I+ +L++ K D +S G+ ++E+
Sbjct: 220 MAPE-RINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 316 SATRKFSEENKLGEGGFGDI---YKGTLKNGKIVAVKKLAIGISRRTLSDFE-NEVRLIS 371
+ +++ +G G G + Y L+ VA+KKL+ +T + E+ L+
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 372 NVHHRNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
V+H+N+I LL + L + Y+ +D L + L+ ++ ++ G
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG 138
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
+ +LH IIHRD+KPSN+++ D KI DFGLAR S + T Y A
Sbjct: 139 IKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRYYRA 193
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEII 516
PE + E VD +S G ++ E++
Sbjct: 194 PEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 115/263 (43%), Gaps = 30/263 (11%)
Query: 320 KFSEENKLGEGGFGDIY----KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHH 375
++ KLG G +G++ K T I +KK ++ + + +EV ++ + H
Sbjct: 22 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNS-GALLDEVAVLKQLDH 80
Query: 376 RNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
N+++L LV E Y D+ + +K ++ +L G YL
Sbjct: 81 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS---GTTYL 137
Query: 435 HEDFHVRIIHRDIKPSNVLLDD---DLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAP 491
H+ I+HRD+KP N+LL+ D KI DFGL+ E + + GT Y AP
Sbjct: 138 HKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKMKERL-GTAYYIAP 192
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDE 551
E + + EK D +S GV++ ++ G G+ + +LKR E G
Sbjct: 193 E-VLRKKYDEKCDVWSCGVILYILLCGY--PPFGGQTDQEILKRV----EKGKF------ 239
Query: 552 SLDPNECTKEAAEKVVEIALMCT 574
S DP + T+ + E + LM T
Sbjct: 240 SFDPPDWTQVSDEAKQLVKLMLT 262
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 32/199 (16%)
Query: 338 GTLKNGKIVAVKKLAIG-------------ISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
GT G+++ VK + G + + + NE R++ V+ L++L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 385 CSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L +V EYM + L F E Q I+L YLH
Sbjct: 110 FKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQ---IVLT----FEYLHS--- 159
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
+ +I+RD+KP N+L+D K+ADFG A+ + L GT Y APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL----CGTPEYLAPEIILSKGY 215
Query: 500 SEKVDAYSFGVLVLEIISG 518
++ VD ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 32/199 (16%)
Query: 338 GTLKNGKIVAVKKLAIG-------------ISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
GT G+++ VK + G + + + NE R++ V+ L++L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 385 CSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L +V EYM + L F E Q I+L YLH
Sbjct: 110 FKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQ---IVLT----FEYLHS--- 159
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
+ +I+RD+KP N+L+D K+ADFG A+ + L GT Y APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL----CGTPEYLAPEIILSKGY 215
Query: 500 SEKVDAYSFGVLVLEIISG 518
++ VD ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 133/306 (43%), Gaps = 55/306 (17%)
Query: 311 LKDLVSATRKFSEENKLGEGGFGDI-YKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRL 369
LK+LV + E LG G G + ++G+ + G+ VAVK++ I L E++L
Sbjct: 13 LKNLVVS------EKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALM----EIKL 61
Query: 370 ISNVH-HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQR-----FDI 423
++ H N+IR C + + + N +L + + N K + +
Sbjct: 62 LTESDDHPNVIRYY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISL 120
Query: 424 ILGTARGLAYLHEDFHVRIIHRDIKPSNVLLD-------------DDLQPKIADFGLARL 470
+ A G+A+LH ++IIHRD+KP N+L+ ++L+ I+DFGL +
Sbjct: 121 LRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 471 LPENQSHLSTKF---AGTLGYTAPE-------YAIHGQLSEKVDAYSFGVLVLEIISGTK 520
L QS T +GT G+ APE +L+ +D +S G + I+S K
Sbjct: 178 LDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
Query: 521 -------SSETKGEEGEYLLKRAWRLYENGTHWE---LMDESLDPNECTKEAAEKVVEIA 570
S E+ G + L L++ E L+ + +D + + A KV+
Sbjct: 238 HPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
Query: 571 LMCTQS 576
L +S
Sbjct: 298 LFWPKS 303
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 96/231 (41%), Gaps = 12/231 (5%)
Query: 296 NISEATELQGPVNYRLKDLVSATRKFSEENKLGEGGFGDIYKGTLKNG-KIVAVKKLAIG 354
NI E E P ++K + F +G G FG++ LKN K+ A+K L
Sbjct: 51 NILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKW 110
Query: 355 --ISRRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKR 412
+ R + F E ++ N + + L L LV +Y L L +
Sbjct: 111 EMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFED 170
Query: 413 GSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLP 472
RF + A + + + +HRDIKP N+L+D + ++ADFG L
Sbjct: 171 RLPEEMARFYL----AEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM 226
Query: 473 ENQSHLSTKFAGTLGYTAPEY-----AIHGQLSEKVDAYSFGVLVLEIISG 518
E+ + S+ GT Y +PE G+ + D +S GV + E++ G
Sbjct: 227 EDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKL--AIGISRRTLSDFENEVRLISNVHHRNLIRLLG 383
LG+G FG + K G+ A+K L + I++ ++ E R++ N H L L
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 75
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRF---DIILGTARGLAYLHEDFHV 440
L V EY AN F +R + RF +I+ L YLH
Sbjct: 76 AFQTHDRLCFVMEY-ANGGELFFHLSRERVFTEERARFYGAEIV----SALEYLHSR--- 127
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLS 500
+++RDIK N++LD D KI DFGL + + + + T F GT Y APE
Sbjct: 128 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLEDNDYG 186
Query: 501 EKVDAYSFGVLVLEIISG 518
VD + GV++ E++ G
Sbjct: 187 RAVDWWGLGVVMYEMMCG 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKL--AIGISRRTLSDFENEVRLISNVHHRNLIRLLG 383
LG+G FG + K G+ A+K L + I++ ++ E R++ N H L L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRF---DIILGTARGLAYLHEDFHV 440
L V EY AN F +R + RF +I+ L YLH
Sbjct: 73 AFQTHDRLCFVMEY-ANGGELFFHLSRERVFTEERARFYGAEIV----SALEYLHSR--- 124
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLS 500
+++RDIK N++LD D KI DFGL + + + + T F GT Y APE
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLEDNDYG 183
Query: 501 EKVDAYSFGVLVLEIISG 518
VD + GV++ E++ G
Sbjct: 184 RAVDWWGLGVVMYEMMCG 201
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKL--AIGISRRTLSDFENEVRLISNVHHRNLIRLLG 383
LG+G FG + K G+ A+K L + I++ ++ E R++ N H L L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRF---DIILGTARGLAYLHEDFHV 440
L V EY AN F +R + RF +I+ L YLH
Sbjct: 73 AFQTHDRLCFVMEY-ANGGELFFHLSRERVFTEERARFYGAEIV----SALEYLHSR--- 124
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLS 500
+++RDIK N++LD D KI DFGL + + + + T F GT Y APE
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLEDNDYG 183
Query: 501 EKVDAYSFGVLVLEIISG 518
VD + GV++ E++ G
Sbjct: 184 RAVDWWGLGVVMYEMMCG 201
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 28/210 (13%)
Query: 320 KFSEENKLGEGGFGDIY------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
+F LG G FG + G KI+ +K+ + + + NE R++ V
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV---VKLKQIEHTLNEKRILQAV 98
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTA 428
+ L++L L +V EY+A + L F E Q I+L
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT-- 153
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
YLH + +I+RD+KP N+L+D ++ DFG A+ + L AGT Y
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----AGTPEY 204
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
APE + ++ VD ++ GVL+ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVK--KLAIGISRRTLSDFENEVRLISNVHHRNLIRLLG 383
LG+G FG + K G+ A+K K + +++ ++ E R++ N H L L
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 215
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
L V EY L L E+ S + + + + +A L YLH + +V +
Sbjct: 216 SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA--LDYLHSEKNV--V 271
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKV 503
+RD+K N++LD D KI DFGL + ++ + + T F GT Y APE V
Sbjct: 272 YRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEVLEDNDYGRAV 330
Query: 504 DAYSFGVLVLEIISG 518
D + GV++ E++ G
Sbjct: 331 DWWGLGVVMYEMMCG 345
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVK--KLAIGISRRTLSDFENEVRLISNVHHRNLIRLLG 383
LG+G FG + K G+ A+K K + +++ ++ E R++ N H L L
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 218
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
L V EY L L E+ S + + + + +A L YLH + +V +
Sbjct: 219 SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA--LDYLHSEKNV--V 274
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKV 503
+RD+K N++LD D KI DFGL + ++ + + T F GT Y APE V
Sbjct: 275 YRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEVLEDNDYGRAV 333
Query: 504 DAYSFGVLVLEIISG 518
D + GV++ E++ G
Sbjct: 334 DWWGLGVVMYEMMCG 348
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 16/168 (9%)
Query: 374 HHRNLIRLLGCCSQGPELI-LVYEYMANSSLDKFL----FGEKRGSLNWKQRF-----DI 423
H R ++L Q P L+ L Y + + L L GE L+ ++RF I
Sbjct: 104 HTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQI 163
Query: 424 ILG-TARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKF 482
+G L +LH+ + II+RDIK N+LLD + + DFGL++ +++ + F
Sbjct: 164 YVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDF 220
Query: 483 AGTLGYTAPEYAIHGQ--LSEKVDAYSFGVLVLEIISGTKSSETKGEE 528
GT+ Y AP+ G + VD +S GVL+ E+++G GE+
Sbjct: 221 CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK 268
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 26/214 (12%)
Query: 327 LGEGGFGDIY----KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV------HHR 376
LG+G FG + KGT ++ AVK L + + D + E ++
Sbjct: 349 LGKGSFGKVMLSERKGT---DELYAVKILKKDV---VIQDDDVECTMVEKRVLALPGKPP 402
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHE 436
L +L C L V EY+ L + ++ G A GL +L
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEIAIGLFFLQS 460
Query: 437 DFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPEN-QSHLSTK-FAGTLGYTAPEYA 494
II+RD+K NV+LD + KIADFG+ + EN ++TK F GT Y APE
Sbjct: 461 K---GIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAPEII 514
Query: 495 IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEE 528
+ + VD ++FGVL+ E+++G E + E+
Sbjct: 515 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED 548
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 115/263 (43%), Gaps = 30/263 (11%)
Query: 320 KFSEENKLGEGGFGDIY----KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHH 375
++ KLG G +G++ K T I +KK ++ + + +EV ++ + H
Sbjct: 5 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNS-GALLDEVAVLKQLDH 63
Query: 376 RNLIRLLGCCSQGPELILVYE-YMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
N+++L LV E Y D+ + +K ++ +L G YL
Sbjct: 64 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS---GTTYL 120
Query: 435 HEDFHVRIIHRDIKPSNVLLDD---DLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAP 491
H+ I+HRD+KP N+LL+ D KI DFGL+ E + + GT Y AP
Sbjct: 121 HKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKMKERL-GTAYYIAP 175
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDE 551
E + + EK D +S GV++ ++ G G+ + +LKR E G
Sbjct: 176 E-VLRKKYDEKCDVWSCGVILYILLCGYPP--FGGQTDQEILKRV----EKGKF------ 222
Query: 552 SLDPNECTKEAAEKVVEIALMCT 574
S DP + T+ + E + LM T
Sbjct: 223 SFDPPDWTQVSDEAKQLVKLMLT 245
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 107/219 (48%), Gaps = 26/219 (11%)
Query: 316 SATRKFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDF-ENEVRLISNVH 374
+ R+ + +G+G +G++++G+ + G+ VAVK + SR S F E E+ +
Sbjct: 34 TVARQITLLECVGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLR 89
Query: 375 HRNLIRLLGC----CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
H N++ + +L L+ Y SL +L + +L+ I+L A G
Sbjct: 90 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASG 146
Query: 431 LAYLH-EDFHVR----IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLST---KF 482
LA+LH E F + I HRD+K N+L+ + Q IAD GLA + ++ + L
Sbjct: 147 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 206
Query: 483 AGTLGYTAPEYAIHG-QLS-----EKVDAYSFGVLVLEI 515
GT Y APE Q+ ++VD ++FG+++ E+
Sbjct: 207 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 34/218 (15%)
Query: 327 LGEGGFGDIYKGTLKNGKI-VAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCC 385
LG GGFG +++ K A+K++ + EV+ ++ + H ++R
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 386 SQG-------PELILVYEYMA-----NSSLDKFLFGEKRGSLNWKQR---FDIILGTARG 430
+ P VY Y+ +L ++ G R ++ ++R I L A
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNG--RCTIEERERSVCLHIFLQIAEA 130
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL---PENQSHLS-------- 479
+ +LH ++HRD+KPSN+ D K+ DFGL + E Q+ L+
Sbjct: 131 VEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARH 187
Query: 480 TKFAGTLGYTAPEYAIHGQ-LSEKVDAYSFGVLVLEII 516
T GT Y +PE IHG S KVD +S G+++ E++
Sbjct: 188 TGQVGTKLYMSPE-QIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 107/225 (47%), Gaps = 24/225 (10%)
Query: 325 NKLGEGGFG--DIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLL 382
KLGEGGF D+ +G L +G A+K++ + ++ + + E + +H N++RL+
Sbjct: 35 QKLGEGGFSYVDLVEG-LHDGHFYALKRI-LCHEQQDREEAQREADMHRLFNHPNILRLV 92
Query: 383 GCCSQ----GPELILVYEYMANSSLDKFL--FGEKRGSLNWKQRFDIILGTARGLAYLHE 436
C + E L+ + +L + +K L Q ++LG RGL +H
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA 152
Query: 437 DFHVRIIHRDIKPSNVLLDDDLQPKIADFG-----LARLLPENQSHLSTKFAG---TLGY 488
+ HRD+KP+N+LL D+ QP + D G + Q+ +A T+ Y
Sbjct: 153 KGYA---HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISY 209
Query: 489 TAPE-YAI--HGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGE 530
APE +++ H + E+ D +S G ++ ++ G + ++G+
Sbjct: 210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD 254
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDF-ENEVRLISNVHHRNLIRLLGC- 384
+G+G +G++++G+ + G+ VAVK + SR S F E E+ + H N++ +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 385 ---CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLH-EDFHV 440
+L L+ Y SL +L + +L+ I+L A GLA+LH E F
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 441 R----IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLST---KFAGTLGYTAPEY 493
+ I HRD+K N+L+ + Q IAD GLA + ++ + L GT Y APE
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 494 AIHG-QLS-----EKVDAYSFGVLVLEI 515
Q+ ++VD ++FG+++ E+
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Query: 378 LIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHED 437
L +L C L V EY+ L + ++ G A GL +L
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 438 FHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPEN-QSHLSTK-FAGTLGYTAPEYAI 495
II+RD+K NV+LD + KIADFG+ + EN ++TK F GT Y APE
Sbjct: 141 ---GIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAPEIIA 194
Query: 496 HGQLSEKVDAYSFGVLVLEIISGTKSSETKGEE 528
+ + VD ++FGVL+ E+++G E + E+
Sbjct: 195 YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED 227
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 102/237 (43%), Gaps = 37/237 (15%)
Query: 344 KIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSL 403
KIV V K T D + E + + H +++ LL S L +V+E+M + L
Sbjct: 55 KIVDVAKFTSSPGLST-EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL 113
Query: 404 ---------DKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLL 454
F++ E S +Q + L Y H++ IIHRD+KP NVLL
Sbjct: 114 CFEIVKRADAGFVYSEAVASHYMRQILE-------ALRYCHDN---NIIHRDVKPENVLL 163
Query: 455 ---DDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVL 511
++ K+ DFG+A L E+ ++ GT + APE + VD + GV+
Sbjct: 164 ASKENSAPVKLGDFGVAIQLGES-GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVI 222
Query: 512 VLEIISG-TKSSETKGEEGEYLLKRAWRLYENGTHWELMDES----------LDPNE 557
+ ++SG TK E ++K +++ N W + ES LDP E
Sbjct: 223 LFILLSGCLPFYGTKERLFEGIIKGKYKM--NPRQWSHISESAKDLVRRMLMLDPAE 277
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 320 KFSEENKLGEGGFGDIYKGTLKN-GKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
++ + LG GG G ++ + K VA+KK+ + +++ E+++I + H N+
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVL-TDPQSVKHALREIKIIRRLDHDNI 70
Query: 379 IRL--------------LGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDII 424
+++ +G ++ + +V EYM + L L ++G L + +
Sbjct: 71 VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVL---EQGPLLEEHARLFM 126
Query: 425 LGTARGLAYLHEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFA 483
RGL Y+H ++HRD+KP+N+ ++ +DL KI DFGLAR++ + SH
Sbjct: 127 YQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSE 183
Query: 484 G--TLGYTAPEYAIH-GQLSEKVDAYSFGVLVLEIISG 518
G T Y +P + ++ +D ++ G + E+++G
Sbjct: 184 GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG 221
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDF-ENEVRLISNVHHRNLIRLLGC- 384
+G+G +G++++G+ + G+ VAVK + SR S F E E+ + H N++ +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 385 ---CSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLH-EDFHV 440
+L L+ Y SL +L + +L+ I+L A GLA+LH E F
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 441 R----IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLST---KFAGTLGYTAPEY 493
+ I HRD+K N+L+ + Q IAD GLA + ++ + L GT Y APE
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 494 AIHG-QLS-----EKVDAYSFGVLVLEI 515
Q+ ++VD ++FG+++ E+
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 98/205 (47%), Gaps = 23/205 (11%)
Query: 326 KLGEGGFGDIYKGTL-KNGKIVAVKKLAIGISRRTLSDFEN-----EVRLISNVHH-RNL 378
++G G G ++K K G ++AVK++ RR+ + EN ++ ++ H +
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQM-----RRSGNKEENKRILMDLDVVLKSHDCPYI 86
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
++ G ++ + E M + + L +G + + + + + L YL E
Sbjct: 87 VQCFGTFITNTDVFIAMELMGTCA--EKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH 144
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY----- 493
V IHRD+KPSN+LLD+ Q K+ DFG++ L ++++ + AG Y APE
Sbjct: 145 GV--IHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA--KDRSAGCAAYMAPERIDPPD 200
Query: 494 AIHGQLSEKVDAYSFGVLVLEIISG 518
+ D +S G+ ++E+ +G
Sbjct: 201 PTKPDYDIRADVWSLGISLVELATG 225
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKL--AIGISRRTLSDFENEVRLISNVHHRNLIRLLG 383
LG+G FG + K G+ A+K L + I++ ++ E R++ N H L L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRF---DIILGTARGLAYLHEDFHV 440
L V EY AN F +R + RF +I+ L YLH
Sbjct: 73 AFQTHDRLCFVMEY-ANGGELFFHLSRERVFTEERARFYGAEIV----SALEYLHSR--- 124
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLST--KFAGTLGYTAPEYAIHGQ 498
+++RDIK N++LD D KI DFGL + E S +T F GT Y APE
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 499 LSEKVDAYSFGVLVLEIISG 518
VD + GV++ E++ G
Sbjct: 182 YGRAVDWWGLGVVMYEMMCG 201
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKL--AIGISRRTLSDFENEVRLISNVHHRNLIRLLG 383
LG+G FG + K G+ A+K L + I++ ++ E R++ N H L L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRF---DIILGTARGLAYLHEDFHV 440
L V EY AN F +R + RF +I+ L YLH
Sbjct: 73 AFQTHDRLCFVMEY-ANGGELFFHLSRERVFTEERARFYGAEIV----SALEYLHSR--- 124
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLST--KFAGTLGYTAPEYAIHGQ 498
+++RDIK N++LD D KI DFGL + E S +T F GT Y APE
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 499 LSEKVDAYSFGVLVLEIISG 518
VD + GV++ E++ G
Sbjct: 182 YGRAVDWWGLGVVMYEMMCG 201
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 141/327 (43%), Gaps = 55/327 (16%)
Query: 286 SRKSKKIQRGNISEATELQGPVNYRLKDLVSATRKFSEENKLGEGGFGDI-YKGTLKNGK 344
SR KK ++ I+ + LK+LV + E LG G G + ++G+ + G+
Sbjct: 10 SRGGKKGRKSRIANIPNFEQS----LKNLVVS------EKILGYGSSGTVVFQGSFQ-GR 58
Query: 345 IVAVKKLAIGISRRTLSDFENEVRLISNVH-HRNLIRLLGCCSQGPELILVYEYMANSSL 403
VAVK++ I L E++L++ H N+IR C + + + N +L
Sbjct: 59 PVAVKRMLIDFCDIALM----EIKLLTESDDHPNVIRYY-CSETTDRFLYIALELCNLNL 113
Query: 404 DKFLFGEKRGSLNWKQR-----FDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLD--- 455
+ + N K + ++ A G+A+LH ++IIHRD+KP N+L+
Sbjct: 114 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSS 170
Query: 456 ----------DDLQPKIADFGLARLLPENQSHLSTKF---AGTLGYTAPEY---AIHGQL 499
++L+ I+DFGL + L Q +GT G+ APE + +L
Sbjct: 171 RFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRL 230
Query: 500 SEKVDAYSFGVLVLEIISGTK-------SSETKGEEGEYLLKRAWRLYENGTHWE---LM 549
+ +D +S G + I+S K S E+ G + L L++ E L+
Sbjct: 231 TRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLI 290
Query: 550 DESLDPNECTKEAAEKVVEIALMCTQS 576
+ +D + + A KV+ L +S
Sbjct: 291 SQMIDHDPLKRPTAMKVLRHPLFWPKS 317
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 32/199 (16%)
Query: 338 GTLKNGKIVAVKKLAIG-------------ISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
GT G+++ VK + G + + + NE R++ V+ L++L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 385 CSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTARGLAYLHEDFH 439
L +V EY+ + L F E Q I+L YLH
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT----FEYLHS--- 159
Query: 440 VRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQL 499
+ +I+RD+KP N+L+D K+ADFG A+ + L GT Y APE +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL----CGTPEYLAPEIILSKGY 215
Query: 500 SEKVDAYSFGVLVLEIISG 518
++ VD ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 29/210 (13%)
Query: 321 FSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSD---FENEVRLISNVHHRN 377
++ EN +G G +G++ K +I ++ A I + + D F+ E+ ++ ++ H N
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRI---RRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 67
Query: 378 LIRLLGCCSQGPELILVYEYMANSSL-----DKFLFGEKRGSLNWKQRFDIILGTARGLA 432
+IRL ++ LV E L K +F E + I+ +A
Sbjct: 68 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA-------RIMKDVLSAVA 120
Query: 433 YLHEDFHVRIIHRDIKPSNVLL---DDDLQPKIADFGL-ARLLPENQSHLSTKFAGTLGY 488
Y H+ + + HRD+KP N L D K+ DFGL AR P + TK GT Y
Sbjct: 121 YCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--MRTK-VGTPYY 174
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
+P+ + G + D +S GV++ ++ G
Sbjct: 175 VSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKL--AIGISRRTLSDFENEVRLISNVHHRNLIRLLG 383
LG+G FG + K G+ A+K L + I++ ++ E R++ N H L L
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 77
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRF---DIILGTARGLAYLHEDFHV 440
L V EY AN F +R + RF +I+ L YLH
Sbjct: 78 AFQTHDRLCFVMEY-ANGGELFFHLSRERVFTEERARFYGAEIV----SALEYLHSR--- 129
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLST--KFAGTLGYTAPEYAIHGQ 498
+++RDIK N++LD D KI DFGL + E S +T F GT Y APE
Sbjct: 130 DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEVLEDND 186
Query: 499 LSEKVDAYSFGVLVLEIISG 518
VD + GV++ E++ G
Sbjct: 187 YGRAVDWWGLGVVMYEMMCG 206
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 29/210 (13%)
Query: 321 FSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSD---FENEVRLISNVHHRN 377
++ EN +G G +G++ K +I ++ A I + + D F+ E+ ++ ++ H N
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRI---RRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 84
Query: 378 LIRLLGCCSQGPELILVYEYMANSSL-----DKFLFGEKRGSLNWKQRFDIILGTARGLA 432
+IRL ++ LV E L K +F E + I+ +A
Sbjct: 85 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA-------RIMKDVLSAVA 137
Query: 433 YLHEDFHVRIIHRDIKPSNVLL---DDDLQPKIADFGL-ARLLPENQSHLSTKFAGTLGY 488
Y H+ + + HRD+KP N L D K+ DFGL AR P + TK GT Y
Sbjct: 138 YCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--MRTK-VGTPYY 191
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
+P+ + G + D +S GV++ ++ G
Sbjct: 192 VSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 28/210 (13%)
Query: 320 KFSEENKLGEGGFGDIY------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
+F LG G FG + G KI+ +K+ + + + NE R++ V
Sbjct: 29 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV---VKLKQIEHTLNEKRILQAV 85
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTA 428
+ L++L L +V EY+A + L F E Q I+L
Sbjct: 86 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT-- 140
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
YLH + +I+RD+KP N+L+D+ ++ DFG A+ + L GT Y
Sbjct: 141 --FEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXL----CGTPEY 191
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
APE + ++ VD ++ GVL+ E+ +G
Sbjct: 192 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 320 KFSEENKLGEGGFGDIY------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
+F LG G FG + G KI+ +K+ + + + NE R++ V
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV---VKLKQIEHTLNEKRILQAV 98
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTA 428
+ L++L L +V EY+A + L F E Q I+L
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQ---IVLT-- 153
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEY 204
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
APE + ++ VD ++ GVL+ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 320 KFSEENKLGEGGFGDIY------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
+F LG G FG + G KI+ +K+ + + + NE R++ V
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV---VKLKQIEHTLNEKRILQAV 98
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTA 428
+ L++L L +V EY+A + L F E Q I+L
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT-- 153
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
YLH + +I+RD+KP N+++D ++ DFG A+ + L GT Y
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEY 204
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
APE I ++ VD ++ GVL+ E+ +G
Sbjct: 205 LAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKL--AIGISRRTLSDFENEVRLISNVHHRNLIRLLG 383
LG+G FG + K G+ A+K L + I++ ++ E R++ N H L L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRF---DIILGTARGLAYLHEDFHV 440
L V EY AN F +R + RF +I+ L YLH
Sbjct: 73 AFQTHDRLCFVMEY-ANGGELFFHLSRERVFTEERARFYGAEIV----SALEYLHSR--- 124
Query: 441 RIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLST--KFAGTLGYTAPEYAIHGQ 498
+++RDIK N++LD D KI DFGL + E S +T F GT Y APE
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 499 LSEKVDAYSFGVLVLEIISG 518
VD + GV++ E++ G
Sbjct: 182 YGRAVDWWGLGVVMYEMMCG 201
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 141/327 (43%), Gaps = 55/327 (16%)
Query: 286 SRKSKKIQRGNISEATELQGPVNYRLKDLVSATRKFSEENKLGEGGFGDI-YKGTLKNGK 344
SR KK ++ I+ + LK+LV + E LG G G + ++G+ + G+
Sbjct: 10 SRGGKKGRKSRIANIPNFEQS----LKNLVVS------EKILGYGSSGTVVFQGSFQ-GR 58
Query: 345 IVAVKKLAIGISRRTLSDFENEVRLISNVH-HRNLIRLLGCCSQGPELILVYEYMANSSL 403
VAVK++ I L E++L++ H N+IR C + + + N +L
Sbjct: 59 PVAVKRMLIDFCDIALM----EIKLLTESDDHPNVIRYY-CSETTDRFLYIALELCNLNL 113
Query: 404 DKFLFGEKRGSLNWKQR-----FDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLD--- 455
+ + N K + ++ A G+A+LH ++IIHRD+KP N+L+
Sbjct: 114 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSS 170
Query: 456 ----------DDLQPKIADFGLARLLPENQSHLSTKF---AGTLGYTAPEY---AIHGQL 499
++L+ I+DFGL + L Q +GT G+ APE + +L
Sbjct: 171 RFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRL 230
Query: 500 SEKVDAYSFGVLVLEIISGTK-------SSETKGEEGEYLLKRAWRLYENGTHWE---LM 549
+ +D +S G + I+S K S E+ G + L L++ E L+
Sbjct: 231 TRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLI 290
Query: 550 DESLDPNECTKEAAEKVVEIALMCTQS 576
+ +D + + A KV+ L +S
Sbjct: 291 SQMIDHDPLKRPTAMKVLRHPLFWPKS 317
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 320 KFSEENKLGEGGFGDIY------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
+F LG G FG + G KI+ +K+ + + + NE R++ V
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV---VKLKQIEHTLNEKRILQAV 98
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTA 428
+ L++L L +V EY+A + L F E Q I+L
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT-- 153
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX----GTPEY 204
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
APE + ++ VD ++ GVL+ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 41/212 (19%)
Query: 326 KLGEGGFGDIYKGT-LKNGKIVAVKKLAIGIS----RRTLSDFENEVRLISNVHHRNLIR 380
+LG G +G + K + +G+I+AVK++ ++ +R L D + +R V +
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR---TVDCPFTVT 70
Query: 381 LLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFD------------IILGTA 428
G + ++ + E M ++SLDKF +KQ D I +
Sbjct: 71 FYGALFREGDVWICMELM-DTSLDKF----------YKQVIDKGQTIPEDILGKIAVSIV 119
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
+ L +LH V IHRD+KPSNVL++ Q K+ DFG++ L ++ + AG Y
Sbjct: 120 KALEHLHSKLSV--IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA--KDIDAGCKPY 175
Query: 489 TAPEYAIHGQLSE-----KVDAYSFGVLVLEI 515
APE I+ +L++ K D +S G+ ++E+
Sbjct: 176 MAPE-RINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 320 KFSEENKLGEGGFGDIY------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
+F LG G FG + G KI+ +K+ + + + NE R++ V
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV---VKLKQIEHTLNEKRILQAV 98
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTA 428
+ L++L L +V EY+A + L F E Q I+L
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT-- 153
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEY 204
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
APE + ++ VD ++ GVL+ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 320 KFSEENKLGEGGFGDIY------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
+F LG G FG + G KI+ +K+ + + + NE R++ V
Sbjct: 43 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV---VKLKQIEHTLNEKRILQAV 99
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTA 428
+ L++L L +V EY+A + L F E Q I+L
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT-- 154
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y
Sbjct: 155 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEY 205
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
APE + ++ VD ++ GVL+ E+ +G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 320 KFSEENKLGEGGFGDIY------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
+F LG G FG + G KI+ +K+ + + + NE R++ V
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV---VKLKQIEHTLNEKRILQAV 98
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTA 428
+ L++L L +V EY+A + L F E Q I+L
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT-- 153
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEY 204
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
APE + ++ VD ++ GVL+ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 22/207 (10%)
Query: 320 KFSEENKLGEGGFGDIY-KGTLKNGKIVAVKKLAIG--ISRRTLSDFENEVRLISNVHHR 376
+F LG G FG + ++ G A+K L + + + NE R++ V+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTARGL 431
L++L L +V EY+A + L F E Q I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT----F 154
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAP 491
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y AP
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAP 207
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISG 518
E + ++ VD ++ GVL+ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 30/221 (13%)
Query: 316 SATRKFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDF-ENEVRLISNVH 374
+ R + +G+G FG++++G + G+ VAVK + SR S F E E+ +
Sbjct: 1 TIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLR 56
Query: 375 HRNLIRLLGCCSQG----PELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
H N++ + ++ +L LV +Y + SL +L R ++ + + L TA G
Sbjct: 57 HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASG 113
Query: 431 LAYLHEDF-----HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA-- 483
LA+LH + I HRD+K N+L+ + IAD GLA + + + + A
Sbjct: 114 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPN 171
Query: 484 ---GTLGYTAPEY------AIHGQLSEKVDAYSFGVLVLEI 515
GT Y APE H + ++ D Y+ G++ EI
Sbjct: 172 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 320 KFSEENKLGEGGFGDIY------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
+F LG G FG + G KI+ +K+ + + + NE R++ V
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV---VKLKQIEHTLNEKRILQAV 98
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTA 428
+ L++L L +V EY+A + L F E Q I+L
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT-- 153
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEY 204
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
APE + ++ VD ++ GVL+ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 30/221 (13%)
Query: 316 SATRKFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDF-ENEVRLISNVH 374
+ R + +G+G FG++++G + G+ VAVK + SR S F E E+ +
Sbjct: 6 TIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLR 61
Query: 375 HRNLIRLLGCCSQG----PELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
H N++ + ++ +L LV +Y + SL +L R ++ + + L TA G
Sbjct: 62 HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASG 118
Query: 431 LAYLHEDF-----HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA-- 483
LA+LH + I HRD+K N+L+ + IAD GLA + + + + A
Sbjct: 119 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPN 176
Query: 484 ---GTLGYTAPEY------AIHGQLSEKVDAYSFGVLVLEI 515
GT Y APE H + ++ D Y+ G++ EI
Sbjct: 177 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 320 KFSEENKLGEGGFGDIY------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
+F LG G FG + G KI+ +K+ + + + NE R++ V
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV---VKLKQIEHTLNEKRILQAV 98
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTA 428
+ L++L L +V EY+A + L F E Q I+L
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT-- 153
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEY 204
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
APE + ++ VD ++ GVL+ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 320 KFSEENKLGEGGFGDIY------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
+F LG G FG + G KI+ +K+ + + + NE R++ V
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV---VKLKQIEHTLNEKRILQAV 98
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTA 428
+ L++L L +V EY+A + L F E Q I+L
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT-- 153
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEY 204
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
APE + ++ VD ++ GVL+ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 320 KFSEENKLGEGGFGDIY------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
+F LG G FG + G KI+ +K+ + + + NE R++ V
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV---VKLKQIEHTLNEKRILQAV 98
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTA 428
+ L++L L +V EY+A + L F E Q I+L
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ---IVLT-- 153
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEY 204
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
APE + ++ VD ++ GVL+ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 30/221 (13%)
Query: 316 SATRKFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDF-ENEVRLISNVH 374
+ R + +G+G FG++++G + G+ VAVK + SR S F E E+ +
Sbjct: 26 TIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLR 81
Query: 375 HRNLIRLLGCCSQG----PELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
H N++ + ++ +L LV +Y + SL +L R ++ + + L TA G
Sbjct: 82 HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASG 138
Query: 431 LAYLHEDF-----HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA-- 483
LA+LH + I HRD+K N+L+ + IAD GLA + + + + A
Sbjct: 139 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPN 196
Query: 484 ---GTLGYTAPEY------AIHGQLSEKVDAYSFGVLVLEI 515
GT Y APE H + ++ D Y+ G++ EI
Sbjct: 197 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 121/294 (41%), Gaps = 27/294 (9%)
Query: 316 SATRKFSEENKLGEGGFGDIYK------GTLKNGKIVAVKKLAIGISRRTLSDFENEVRL 369
S T ++ +LG+G F + + G KI+ KKL S R E E R+
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL----SARDHQKLEREARI 56
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
+ H N++RL S+ LV++ + L + + R + I
Sbjct: 57 CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA--REYYSEADASHCIQQILE 114
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQ---PKIADFGLARLLPENQSHLSTKFAGTL 486
+ + H + I+HRD+KP N+LL + K+ADFGLA + +Q FAGT
Sbjct: 115 SVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG-FAGTP 170
Query: 487 GYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHW 546
GY +PE + VD ++ GV++ ++ G + + Y +A W
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEW 230
Query: 547 --------ELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLK 592
+L+++ L N + A + ++ +C +S S E V LK
Sbjct: 231 DTVTPEAKDLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLK 284
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 30/221 (13%)
Query: 316 SATRKFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDF-ENEVRLISNVH 374
+ R + +G+G FG++++G + G+ VAVK + SR S F E E+ +
Sbjct: 3 TIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLR 58
Query: 375 HRNLIRLLGCCSQG----PELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
H N++ + ++ +L LV +Y + SL +L R ++ + + L TA G
Sbjct: 59 HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASG 115
Query: 431 LAYLHEDF-----HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA-- 483
LA+LH + I HRD+K N+L+ + IAD GLA + + + + A
Sbjct: 116 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPN 173
Query: 484 ---GTLGYTAPEY------AIHGQLSEKVDAYSFGVLVLEI 515
GT Y APE H + ++ D Y+ G++ EI
Sbjct: 174 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 37/216 (17%)
Query: 321 FSEENKLGEGGFGDIYKGTLK--NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
FS +G GGFG++Y G K GK+ A+K L ++ + + E ++ +L
Sbjct: 190 FSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCL----DKKRIKMKQGETLALNERIMLSL 244
Query: 379 IRLLGCCSQGPELI-LVYEYMANSSLDKFLFGEKRGSLNWK-----------QRF---DI 423
+ C P ++ + Y + L L G L++ RF +I
Sbjct: 245 VSTGDC----PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEI 300
Query: 424 ILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA 483
ILG L ++H F +++RD+KP+N+LLD+ +I+D GLA + + H S
Sbjct: 301 ILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 350
Query: 484 GTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
GT GY APE G D +S G ++ +++ G
Sbjct: 351 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 37/216 (17%)
Query: 321 FSEENKLGEGGFGDIYKGTLK--NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
FS +G GGFG++Y G K GK+ A+K L ++ + + E ++ +L
Sbjct: 191 FSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCL----DKKRIKMKQGETLALNERIMLSL 245
Query: 379 IRLLGCCSQGPELI-LVYEYMANSSLDKFLFGEKRGSLNWK-----------QRF---DI 423
+ C P ++ + Y + L L G L++ RF +I
Sbjct: 246 VSTGDC----PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEI 301
Query: 424 ILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA 483
ILG L ++H F +++RD+KP+N+LLD+ +I+D GLA + + H S
Sbjct: 302 ILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 484 GTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
GT GY APE G D +S G ++ +++ G
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 30/221 (13%)
Query: 316 SATRKFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDF-ENEVRLISNVH 374
+ R + +G+G FG++++G + G+ VAVK + SR S F E E+ +
Sbjct: 39 TIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLR 94
Query: 375 HRNLIRLLGCCSQG----PELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARG 430
H N++ + ++ +L LV +Y + SL +L R ++ + + L TA G
Sbjct: 95 HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASG 151
Query: 431 LAYLHEDF-----HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA-- 483
LA+LH + I HRD+K N+L+ + IAD GLA + + + + A
Sbjct: 152 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPN 209
Query: 484 ---GTLGYTAPEY------AIHGQLSEKVDAYSFGVLVLEI 515
GT Y APE H + ++ D Y+ G++ EI
Sbjct: 210 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 37/216 (17%)
Query: 321 FSEENKLGEGGFGDIYKGTLK--NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
FS +G GGFG++Y G K GK+ A+K L ++ + + E ++ +L
Sbjct: 191 FSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCL----DKKRIKMKQGETLALNERIMLSL 245
Query: 379 IRLLGCCSQGPELI-LVYEYMANSSLDKFLFGEKRGSLNWK-----------QRF---DI 423
+ C P ++ + Y + L L G L++ RF +I
Sbjct: 246 VSTGDC----PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEI 301
Query: 424 ILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA 483
ILG L ++H F +++RD+KP+N+LLD+ +I+D GLA + + H S
Sbjct: 302 ILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 484 GTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
GT GY APE G D +S G ++ +++ G
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 37/216 (17%)
Query: 321 FSEENKLGEGGFGDIYKGTLK--NGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNL 378
FS +G GGFG++Y G K GK+ A+K L ++ + + E ++ +L
Sbjct: 191 FSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCL----DKKRIKMKQGETLALNERIMLSL 245
Query: 379 IRLLGCCSQGPELI-LVYEYMANSSLDKFLFGEKRGSLNWK-----------QRF---DI 423
+ C P ++ + Y + L L G L++ RF +I
Sbjct: 246 VSTGDC----PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEI 301
Query: 424 ILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA 483
ILG L ++H F +++RD+KP+N+LLD+ +I+D GLA + + H S
Sbjct: 302 ILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 484 GTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
GT GY APE G D +S G ++ +++ G
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 320 KFSEENKLGEGGFGDIY------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
+F LG G FG + G KI+ +K+ + + + NE R++ V
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV---VKLKQIEHTLNEKRILQAV 98
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTA 428
+ L++L L +V EY+A + L F E Q I+L
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ---IVLT-- 153
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEY 204
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
APE + ++ VD ++ GVL+ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 30/218 (13%)
Query: 319 RKFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDF-ENEVRLISNVHHRN 377
R + +G+G FG++++G + G+ VAVK + SR S F E E+ + H N
Sbjct: 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHEN 58
Query: 378 LIRLLGCCSQG----PELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
++ + ++ +L LV +Y + SL +L R ++ + + L TA GLA+
Sbjct: 59 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAH 115
Query: 434 LHEDF-----HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFA----- 483
LH + I HRD+K N+L+ + IAD GLA + + + + A
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRV 173
Query: 484 GTLGYTAPEY------AIHGQLSEKVDAYSFGVLVLEI 515
GT Y APE H + ++ D Y+ G++ EI
Sbjct: 174 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 121/294 (41%), Gaps = 27/294 (9%)
Query: 316 SATRKFSEENKLGEGGFGDIYK------GTLKNGKIVAVKKLAIGISRRTLSDFENEVRL 369
S T ++ +LG+G F + + G KI+ KKL S R E E R+
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL----SARDHQKLEREARI 56
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
+ H N++RL S+ LV++ + L + + R + I
Sbjct: 57 CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA--REYYSEADASHCIQQILE 114
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQ---PKIADFGLARLLPENQSHLSTKFAGTL 486
+ + H + I+HRD+KP N+LL + K+ADFGLA + +Q FAGT
Sbjct: 115 SVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG-FAGTP 170
Query: 487 GYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHW 546
GY +PE + VD ++ GV++ ++ G + + Y +A W
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEW 230
Query: 547 --------ELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLK 592
+L+++ L N + A + ++ +C +S S E V LK
Sbjct: 231 DTVTPEAKDLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLK 284
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 320 KFSEENKLGEGGFGDIY------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
+F LG G FG + G KI+ +K+ + + + NE R++ V
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV---VKLKQIEHTLNEKRILQAV 98
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTA 428
+ L++L L +V EY+A + L F E Q I+L
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ---IVLT-- 153
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEY 204
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
APE + ++ VD ++ GVL+ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 131/303 (43%), Gaps = 46/303 (15%)
Query: 352 AIGISRRTLSDFENEVRLISNV-HHRNLIRLLGCCSQGPELILVYEYMANSSL-DKFL-- 407
A+ + ++ D E+ ++ H N+I L G + LV E M L DK L
Sbjct: 56 AVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ 115
Query: 408 --FGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVL-LDDDLQP---K 461
F E+ S ++ + + YLH ++HRD+KPSN+L +D+ P +
Sbjct: 116 KFFSEREASF-------VLHTIGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLR 165
Query: 462 IADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG-TK 520
I DFG A+ L L T T + APE E D +S G+L+ +++G T
Sbjct: 166 ICDFGFAKQLRAENGLLMTP-CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
Query: 521 SSETKGEEGEYLLKR--AWRLYENGTHWELMDES----------LDPNECTKEAAEKVVE 568
+ + E +L R + + +G +W + E+ +DP++ + A++V++
Sbjct: 225 FANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQ--RLTAKQVLQ 282
Query: 569 IALMCTQ----SAANSRPTMSEVVALLKSTSSSLLGNKPL--LKP----TFVETDYRKTP 618
+ + + S + V + +T S+L +KP LKP + RK P
Sbjct: 283 HPWVTQKDKLPQSQLSHQDLQLVKGAMAATYSALNSSKPTPQLKPIESSILAQRRVRKLP 342
Query: 619 ADT 621
+ T
Sbjct: 343 STT 345
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 320 KFSEENKLGEGGFGDIY------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
+F LG G FG + G KI+ +K+ + + + NE R++ V
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV---VKLKQIEHTLNEKRILQAV 119
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTA 428
+ L++L L +V EY+A + L F E Q I+L
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ---IVLT-- 174
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y
Sbjct: 175 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEY 225
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
APE + ++ VD ++ GVL+ E+ +G
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 71
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E M D F F +RG+L + + +
Sbjct: 72 FSGVIRLLDWFERPDSFVLILERMEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHC 130
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 131 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 184
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 219
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 127/314 (40%), Gaps = 59/314 (18%)
Query: 294 RGNISEATELQGPVNYRLKDLVSATRKFSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLA 352
RG SE + G R + + F ++LG G +G+++K K +G++ AVK
Sbjct: 34 RGEASETLQSPGYDPSRPESFFQQS--FQRLSRLGHGSYGEVFKVRSKEDGRLYAVK--- 88
Query: 353 IGISRRTLSDF---ENEVRLISNV-------HHRNLIRLLGCCSQGPELILVYEYMANSS 402
R++S F ++ R ++ V H +RL +G L L E + S
Sbjct: 89 -----RSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTE-LCGPS 142
Query: 403 LDKFLFGEKRG-SLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPK 461
L + E G SL Q + + T LA+LH ++H D+KP+N+ L + K
Sbjct: 143 LQQHC--EAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCK 197
Query: 462 IADFGLARLLPENQSHLSTKFAGTLG-----YTAPEYAIHGQLSEKVDAYSFGVLVLEII 516
+ DFGL L T AG + Y APE + G D +S G+ +LE+
Sbjct: 198 LGDFGLL-------VELGTAGAGEVQEGDPRYMAPEL-LQGSYGTAADVFSLGLTILEVA 249
Query: 517 SGTKSSETKGEEGEYLLKRAWRLYENGTHWELMDESLDPNECTKEAAEKVVEIALMCTQS 576
+ L G W+ + + P E T + ++ + +M +
Sbjct: 250 CNME------------------LPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEP 291
Query: 577 AANSRPTMSEVVAL 590
R T ++AL
Sbjct: 292 DPKLRATAEALLAL 305
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 320 KFSEENKLGEGGFGDIY-KGTLKNGKIVAVKKLAIG--ISRRTLSDFENEVRLISNVHHR 376
+F LG G FG + ++ G A+K L + + + NE R++ V+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFP 101
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTARGL 431
L++L L +V EY + L F E Q I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT----F 154
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAP 491
YLH + +I+RD+KP N+++D K+ DFGLA+ + L GT Y AP
Sbjct: 155 EYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXL----CGTPEYLAP 207
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISG 518
E + ++ VD ++ GVL+ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 320 KFSEENKLGEGGFGDIY------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
+F LG G FG + G KI+ +K+ + + + NE R++ V
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV---VKLKQIEHTLNEKRILQAV 119
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTA 428
+ L++L L +V EY+A + L F E Q I+L
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT-- 174
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
YLH + +I+RD+KP N+L+D ++ DFG A+ + + GT Y
Sbjct: 175 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGATWTLCGTPEY 225
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
APE + ++ VD ++ GVL+ E+ +G
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 320 KFSEENKLGEGGFGDIY------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
+F LG G FG + G KI+ +K+ + + + NE R++ V
Sbjct: 37 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV---VKLKQIEHTLNEKRILQAV 93
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTA 428
+ L++L L +V EY+A + L F E Q I+L
Sbjct: 94 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ---IVLT-- 148
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y
Sbjct: 149 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEY 199
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
APE + ++ VD ++ GVL+ E+ +G
Sbjct: 200 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 24/214 (11%)
Query: 352 AIGISRRTLSDFENEVRLISNV-HHRNLIRLLGCCSQGPELILVYEYMANSSL-DKFL-- 407
A+ + ++ D E+ ++ H N+I L G + LV E M L DK L
Sbjct: 56 AVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ 115
Query: 408 --FGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVL-LDDDLQP---K 461
F E+ S ++ + + YLH ++HRD+KPSN+L +D+ P +
Sbjct: 116 KFFSEREASF-------VLHTIGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLR 165
Query: 462 IADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG-TK 520
I DFG A+ L L T T + APE E D +S G+L+ +++G T
Sbjct: 166 ICDFGFAKQLRAENGLLMTP-CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
Query: 521 SSETKGEEGEYLLKR--AWRLYENGTHWELMDES 552
+ + E +L R + + +G +W + E+
Sbjct: 225 FANGPSDTPEEILTRIGSGKFTLSGGNWNTVSET 258
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 320 KFSEENKLGEGGFGDIY------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
+F LG G FG + G KI+ +K+ + + + NE R++ V
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV---VKLKQIEHTLNEKRILQAV 98
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTA 428
+ L++L L +V EY+A + L F E Q I+L
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT-- 153
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEY 204
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
APE + ++ VD ++ GVL+ ++ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 325 NKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDF-ENEVRLISNVHHRNLIRLLG 383
++G+G +G+++ G + G+ VAVK + + S F E E+ + H N++ +
Sbjct: 43 KQIGKGRYGEVWMGKWR-GEKVAVK---VFFTTEEASWFRETEIYQTVLMRHENILGFIA 98
Query: 384 CCSQGP----ELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLH-EDF 438
+G +L L+ +Y N SL +L K +L+ K + + GL +LH E F
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 439 HVR----IIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTK---FAGTLGYTAP 491
+ I HRD+K N+L+ + IAD GLA + + + GT Y P
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
Query: 492 EYAI------HGQLSEKVDAYSFGVLVLEI 515
E H Q D YSFG+++ E+
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVK--KLAIGISRRTLSDFENEVRLISNVHHRNLIRLLG 383
LG+G FG + K G+ A+K K + +++ ++ E R++ N H L L
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 76
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
L V EY L L E+ S + + + + +A L YLH + +V +
Sbjct: 77 SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA--LDYLHSEKNV--V 132
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKV 503
+RD+K N++LD D KI DFGL + ++ + + F GT Y APE V
Sbjct: 133 YRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEYLAPEVLEDNDYGRAV 191
Query: 504 DAYSFGVLVLEIISG 518
D + GV++ E++ G
Sbjct: 192 DWWGLGVVMYEMMCG 206
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVK--KLAIGISRRTLSDFENEVRLISNVHHRNLIRLLG 383
LG+G FG + K G+ A+K K + +++ ++ E R++ N H L L
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 75
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
L V EY L L E+ S + + + + +A L YLH + +V +
Sbjct: 76 SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA--LDYLHSEKNV--V 131
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKV 503
+RD+K N++LD D KI DFGL + ++ + + F GT Y APE V
Sbjct: 132 YRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEYLAPEVLEDNDYGRAV 190
Query: 504 DAYSFGVLVLEIISG 518
D + GV++ E++ G
Sbjct: 191 DWWGLGVVMYEMMCG 205
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 8/195 (4%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVK--KLAIGISRRTLSDFENEVRLISNVHHRNLIRLLG 383
LG+G FG + K G+ A+K K + +++ ++ E R++ N H L L
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 77
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
L V EY L L E+ S + + + + +A L YLH + +V +
Sbjct: 78 SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA--LDYLHSEKNV--V 133
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKV 503
+RD+K N++LD D KI DFGL + ++ + + F GT Y APE V
Sbjct: 134 YRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEYLAPEVLEDNDYGRAV 192
Query: 504 DAYSFGVLVLEIISG 518
D + GV++ E++ G
Sbjct: 193 DWWGLGVVMYEMMCG 207
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 131/306 (42%), Gaps = 55/306 (17%)
Query: 311 LKDLVSATRKFSEENKLGEGGFGDI-YKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRL 369
LK+LV + E LG G G + ++G+ + G+ VAVK++ I L E++L
Sbjct: 13 LKNLVVS------EKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALM----EIKL 61
Query: 370 ISNVH-HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQR-----FDI 423
++ H N+IR C + + + N +L + + N K + +
Sbjct: 62 LTESDDHPNVIRYY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISL 120
Query: 424 ILGTARGLAYLHEDFHVRIIHRDIKPSNVLLD-------------DDLQPKIADFGLARL 470
+ A G+A+LH ++IIHRD+KP N+L+ ++L+ I+DFGL +
Sbjct: 121 LRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 471 LPENQSHLSTKF---AGTLGYTAPE-------YAIHGQLSEKVDAYSFGVLVLEIISGTK 520
L Q +GT G+ APE +L+ +D +S G + I+S K
Sbjct: 178 LDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
Query: 521 -------SSETKGEEGEYLLKRAWRLYENGTHWE---LMDESLDPNECTKEAAEKVVEIA 570
S E+ G + L L++ E L+ + +D + + A KV+
Sbjct: 238 HPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
Query: 571 LMCTQS 576
L +S
Sbjct: 298 LFWPKS 303
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 320 KFSEENKLGEGGFGDIY-KGTLKNGKIVAVKKLAIG--ISRRTLSDFENEVRLISNVHHR 376
+F LG G FG + ++ G A+K L + + + NE R++ V+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTARGL 431
L++L L +V EY+ + L F E Q I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT----F 154
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAP 491
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y AP
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAP 207
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISG 518
E + ++ VD ++ GVL+ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 320 KFSEENKLGEGGFGDIY-KGTLKNGKIVAVKKLAIG--ISRRTLSDFENEVRLISNVHHR 376
+F LG G FG + ++ G A+K L + + + NE R++ V+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTARGL 431
L++L L +V EY+ + L F E Q I+L
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT----F 155
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAP 491
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y AP
Sbjct: 156 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAP 208
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISG 518
E + ++ VD ++ GVL+ E+ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 40/216 (18%)
Query: 320 KFSEENKLGEGGFGDI----YKGT--------LKNGKIVAVKKLAIGISRRTLSDFENEV 367
+F LG G FG + +K T L K+V +K++ TL NE
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQI-----EHTL----NEK 92
Query: 368 RLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFD 422
R++ V+ L++L L +V EY+ + L F E Q
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ--- 149
Query: 423 IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKF 482
I+L YLH + +I+RD+KP N+L+D ++ DFG A+ + L
Sbjct: 150 IVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---- 198
Query: 483 AGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
GT Y APE + ++ VD ++ GVL+ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 320 KFSEENKLGEGGFGDIY-KGTLKNGKIVAVKKLAIG--ISRRTLSDFENEVRLISNVHHR 376
+F LG G FG + ++ G A+K L + + + NE R++ V+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTARGL 431
L++L L +V EY+ + L F E Q I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT----F 154
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAP 491
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y AP
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAP 207
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISG 518
E + ++ VD ++ GVL+ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 40/216 (18%)
Query: 320 KFSEENKLGEGGFGDI----YKGT--------LKNGKIVAVKKLAIGISRRTLSDFENEV 367
+F LG G FG + +K T L K+V +K++ TL NE
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI-----EHTL----NEK 93
Query: 368 RLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFD 422
R++ V+ L++L L +V EY+ + L F E Q
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ--- 150
Query: 423 IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKF 482
I+L YLH + +I+RD+KP N+L+D ++ DFG A+ + L
Sbjct: 151 IVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---- 199
Query: 483 AGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
GT Y APE + ++ VD ++ GVL+ E+ +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 92/216 (42%), Gaps = 40/216 (18%)
Query: 320 KFSEENKLGEGGFGDI----YKGT--------LKNGKIVAVKKLAIGISRRTLSDFENEV 367
+F LG G FG + +K T L K+V +K++ TL NE
Sbjct: 43 QFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI-----EHTL----NEK 93
Query: 368 RLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFD 422
R+ V+ L++L L +V EY + L F E Q
Sbjct: 94 RIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQ--- 150
Query: 423 IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKF 482
I+L YLH + +I+RD+KP N+L+D K+ADFG A+ + L
Sbjct: 151 IVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL---- 199
Query: 483 AGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
GT Y APE + ++ VD ++ GVL+ E+ +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 320 KFSEENKLGEGGFGDIY-KGTLKNGKIVAVKKLAIG--ISRRTLSDFENEVRLISNVHHR 376
+F LG G FG + ++ G A+K L + + + NE R++ V+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTARGL 431
L++L L +V EY+ + L F E Q I+L
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT----F 155
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAP 491
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y AP
Sbjct: 156 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL----CGTPEYLAP 208
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISG 518
E + ++ VD ++ GVL+ E+ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 40/216 (18%)
Query: 320 KFSEENKLGEGGFGDI----YKGT--------LKNGKIVAVKKLAIGISRRTLSDFENEV 367
+F LG G FG + +K T L K+V +K++ TL NE
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQI-----EHTL----NEK 92
Query: 368 RLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFD 422
R++ V+ L++L L +V EY+ + L F E Q
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ--- 149
Query: 423 IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKF 482
I+L YLH + +I+RD+KP N+L+D ++ DFG A+ + L
Sbjct: 150 IVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---- 198
Query: 483 AGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
GT Y APE + ++ VD ++ GVL+ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 40/216 (18%)
Query: 320 KFSEENKLGEGGFGDI----YKGT--------LKNGKIVAVKKLAIGISRRTLSDFENEV 367
+F LG G FG + +K T L K+V +K++ TL NE
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI-----EHTL----NEK 85
Query: 368 RLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFD 422
R++ V+ L++L L +V EY+ + L F E Q
Sbjct: 86 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ--- 142
Query: 423 IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKF 482
I+L YLH + +I+RD+KP N+L+D ++ DFG A+ + L
Sbjct: 143 IVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---- 191
Query: 483 AGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
GT Y APE + ++ VD ++ GVL+ E+ +G
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 40/216 (18%)
Query: 320 KFSEENKLGEGGFGDI----YKGT--------LKNGKIVAVKKLAIGISRRTLSDFENEV 367
+F LG G FG + +K T L K+V +K++ TL NE
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI-----EHTL----NEK 93
Query: 368 RLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFD 422
R++ V+ L++L L +V EY+ + L F E Q
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ--- 150
Query: 423 IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKF 482
I+L YLH + +I+RD+KP N+L+D ++ DFG A+ + L
Sbjct: 151 IVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---- 199
Query: 483 AGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
GT Y APE + ++ VD ++ GVL+ E+ +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 320 KFSEENKLGEGGFGDIY-KGTLKNGKIVAVKKLAIG--ISRRTLSDFENEVRLISNVHHR 376
+F LG G FG + ++ G A+K L + + + NE R++ V+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTARGL 431
L++L L +V EY+ + L F E Q I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT----F 154
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAP 491
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y AP
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAP 207
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISG 518
E + ++ VD ++ GVL+ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 22/207 (10%)
Query: 320 KFSEENKLGEGGFGDIY-KGTLKNGKIVAVKKLAIG--ISRRTLSDFENEVRLISNVHHR 376
+F LG G FG + ++ G A+K L + + + NE R++ V+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTARGL 431
L++L L +V EY + L F E Q I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT----F 154
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAP 491
YLH + +I+RD+KP N+++D K+ DFG A+ + L GT Y AP
Sbjct: 155 EYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL----CGTPEYLAP 207
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISG 518
E + ++ VD ++ GVL+ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 40/216 (18%)
Query: 320 KFSEENKLGEGGFGDI----YKGT--------LKNGKIVAVKKLAIGISRRTLSDFENEV 367
+F LG G FG + +K T L K+V +K++ TL NE
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI-----EHTL----NEK 93
Query: 368 RLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFD 422
R++ V+ L++L L +V EY+ + L F E Q
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ--- 150
Query: 423 IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKF 482
I+L YLH + +I+RD+KP N+L+D ++ DFG A+ + L
Sbjct: 151 IVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---- 199
Query: 483 AGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
GT Y APE + ++ VD ++ GVL+ E+ +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 40/216 (18%)
Query: 320 KFSEENKLGEGGFGDI----YKGT--------LKNGKIVAVKKLAIGISRRTLSDFENEV 367
+F LG G FG + +K T L K+V +K++ TL NE
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQI-----EHTL----NEK 92
Query: 368 RLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFD 422
R++ V+ L++L L +V EY+ + L F E Q
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ--- 149
Query: 423 IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKF 482
I+L YLH + +I+RD+KP N+L+D ++ DFG A+ + L
Sbjct: 150 IVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---- 198
Query: 483 AGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
GT Y APE + ++ VD ++ GVL+ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 320 KFSEENKLGEGGFGDIY-KGTLKNGKIVAVKKLAIG--ISRRTLSDFENEVRLISNVHHR 376
+F LG G FG + ++ G A+K L + + + NE R++ V+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFP 101
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTARGL 431
L++L L +V EY + L F E Q I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT----F 154
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAP 491
YLH + +I+RD+KP N+++D ++ DFGLA+ + L GT Y AP
Sbjct: 155 EYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXL----CGTPEYLAP 207
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISG 518
E + ++ VD ++ GVL+ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 40/216 (18%)
Query: 320 KFSEENKLGEGGFGDI----YKGT--------LKNGKIVAVKKLAIGISRRTLSDFENEV 367
+F LG G FG + +K T L K+V +K++ TL NE
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI-----EHTL----NEK 93
Query: 368 RLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFD 422
R++ V+ L++L L +V EY + L F E Q
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ--- 150
Query: 423 IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKF 482
I+L YLH + +I+RD+KP N+++D K+ DFG A+ + L
Sbjct: 151 IVLT----FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---- 199
Query: 483 AGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
GT Y APE + ++ VD ++ GVL+ E+ +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 22/207 (10%)
Query: 320 KFSEENKLGEGGFGDIY-KGTLKNGKIVAVKKLAIG--ISRRTLSDFENEVRLISNVHHR 376
+F LG G FG + ++ G A+K L + + + NE R++ V+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTARGL 431
L++L L +V EY + L F E Q I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQ---IVLT----F 154
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAP 491
YLH + +I+RD+KP N+++D K+ DFG A+ + L GT Y AP
Sbjct: 155 EYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL----CGTPEYLAP 207
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISG 518
E + ++ VD ++ GVL+ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 320 KFSEENKLGEGGFGDIY-KGTLKNGKIVAVKKLAIG--ISRRTLSDFENEVRLISNVHHR 376
+F LG G FG + ++ G A+K L + + + NE R++ V+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTARGL 431
L++L L +V EY+ + L F E Q I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ---IVLT----F 154
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAP 491
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y AP
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAP 207
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISG 518
E + ++ VD ++ GVL+ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 320 KFSEENKLGEGGFGDIY-KGTLKNGKIVAVKKLAIG--ISRRTLSDFENEVRLISNVHHR 376
+F LG G FG + ++ G A+K L + + + NE R++ V+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTARGL 431
L++L L +V EY+ + L F E Q I+L
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ---IVLT----F 155
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAP 491
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y AP
Sbjct: 156 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAP 208
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISG 518
E + ++ VD ++ GVL+ E+ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 32/214 (14%)
Query: 321 FSEENKLGEGGFGDI-YKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRNL 378
F ++ LG G G I Y+G N + VAVK+ I S + EV+L+ H N+
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDN-RDVAVKR----ILPECFSFADREVQLLRESDEHPNV 80
Query: 379 IRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
IR C + + + + ++L +++ + L + ++ T GLA+LH
Sbjct: 81 IRYF-CTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGL-EPITLLQQTTSGLAHLHS-- 136
Query: 439 HVRIIHRDIKPSNVLL-----DDDLQPKIADFGLARLLPENQSHLSTK--FAGTLGYTAP 491
+ I+HRD+KP N+L+ ++ I+DFGL + L + S + GT G+ AP
Sbjct: 137 -LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP 195
Query: 492 EYAIHGQLSEK--------VDAYSFGVLVLEIIS 517
E LSE VD +S G + +IS
Sbjct: 196 E-----MLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 40/216 (18%)
Query: 320 KFSEENKLGEGGFGDI----YKGT--------LKNGKIVAVKKLAIGISRRTLSDFENEV 367
+F LG G FG + +K T L K+V +K++ TL NE
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI-----EHTL----NEK 85
Query: 368 RLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFD 422
R++ V+ L++L L +V EY+ + L F E Q
Sbjct: 86 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ--- 142
Query: 423 IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKF 482
I+L YLH + +I+RD+KP N+L+D ++ DFG A+ + L
Sbjct: 143 IVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---- 191
Query: 483 AGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
GT Y APE + ++ VD ++ GVL+ E+ +G
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 320 KFSEENKLGEGGFGDI----YKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHH 375
+F LG G FG + +K T + + + K + + + + NE R++ V+
Sbjct: 63 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF 121
Query: 376 RNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTARG 430
L++L L +V EY+ + L F E Q I+L
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT---- 174
Query: 431 LAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTA 490
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y A
Sbjct: 175 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLA 227
Query: 491 PEYAIHGQLSEKVDAYSFGVLVLEIISG 518
PE + ++ VD ++ GVL+ E+ +G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 320 KFSEENKLGEGGFGDIY-KGTLKNGKIVAVKKLAIG--ISRRTLSDFENEVRLISNVHHR 376
+F LG G FG + ++ G A+K L + + + NE R++ V+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTARGL 431
L++L L +V EY+ + L F E Q I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ---IVLT----F 154
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAP 491
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y AP
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAP 207
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISG 518
E + ++ VD ++ GVL+ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 28/210 (13%)
Query: 320 KFSEENKLGEGGFGDIY------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
+F LG G FG + G KI+ +K+ + + + NE R++ V
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV---VKLKQIEHTLNEKRILQAV 98
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTA 428
+ L++L L +V EY+A + L F E Q I+L
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT-- 153
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEY 204
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
AP + ++ VD ++ GVL+ E+ +G
Sbjct: 205 LAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
+H L+ L C L V EY+ L F +R RF + L Y
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARF-YSAEISLALNY 136
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLAR--LLPENQSHLSTKFAGTLGYTAP 491
LHE II+RD+K NVLLD + K+ D+G+ + L P + ++ F GT Y AP
Sbjct: 137 LHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSXFCGTPNYIAP 190
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKG 526
E VD ++ GVL+ E+++G + G
Sbjct: 191 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 225
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 320 KFSEENKLGEGGFGDIY-KGTLKNGKIVAVKKLAIG--ISRRTLSDFENEVRLISNVHHR 376
+F LG G FG + ++ G A+K L + + + NE R++ V+
Sbjct: 28 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 87
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTARGL 431
L++L L +V EY+ + L F E Q I+L
Sbjct: 88 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT----F 140
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAP 491
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT Y AP
Sbjct: 141 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL----CGTPEYLAP 193
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISG 518
E + ++ VD ++ GVL+ E+ +G
Sbjct: 194 EIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
+H L+ L C L V EY+ L F +R RF + L Y
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARF-YSAEISLALNY 168
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLAR--LLPENQSHLSTKFAGTLGYTAP 491
LHE II+RD+K NVLLD + K+ D+G+ + L P + ++ F GT Y AP
Sbjct: 169 LHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSTFCGTPNYIAP 222
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKG 526
E VD ++ GVL+ E+++G + G
Sbjct: 223 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 257
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 86
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 87 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 145
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 146 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 199
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 234
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 47/215 (21%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSD--FEN-EVRLISNVHHRNLIRLLG 383
+G G FG +++ L VA+KK+ L D F+N E++++ V H N++ L
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKV--------LQDKRFKNRELQIMRIVKHPNVVDLKA 99
Query: 384 CC-SQGPE-----LILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIIL------GTARGL 431
S G + L LV EY+ + ++ R KQ ++L R L
Sbjct: 100 FFYSNGDKKDEVFLNLVLEYVPET-----VYRASRHYAKLKQTMPMLLIKLYMYQLLRSL 154
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQP----KIADFGLARLL---PENQSHLSTKFAG 484
AY+H + I HRDIKP N+LLD P K+ DFG A++L N S + +++
Sbjct: 155 AYIHS---IGICHRDIKPQNLLLD---PPSGVLKLIDFGSAKILIAGEPNVSXICSRY-- 206
Query: 485 TLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEIISG 518
Y APE + +D +S G ++ E++ G
Sbjct: 207 ---YRAPELIFGATNYTTNIDIWSTGCVMAELMQG 238
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 86
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 87 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 145
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 146 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 199
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 234
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 87
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 88 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 146
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 147 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 200
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 235
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 101 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 159
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 160 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 213
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 248
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 100 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 158
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 159 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 212
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 247
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 101 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 159
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 160 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 213
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 248
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 100 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 158
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 159 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 212
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 247
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 72
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 73 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 131
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 132 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 185
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 220
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 72
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 73 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 131
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 132 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 185
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 220
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 101 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 159
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 160 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 213
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 248
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 114
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 115 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 173
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 174 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 227
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 262
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 100 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 158
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 159 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 212
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 247
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 87
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 88 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 146
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 147 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 200
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 235
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 100 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 158
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 159 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 212
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 247
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 101 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 159
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 160 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 213
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 248
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 87
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 88 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 146
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 147 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 200
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 235
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 70
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 71 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 129
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 130 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 183
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 184 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 218
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 114
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 115 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 173
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 174 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 227
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 262
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
+H L+ L C L V EY+ L F +R RF + L Y
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARF-YSAEISLALNY 121
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLAR--LLPENQSHLSTKFAGTLGYTAP 491
LHE II+RD+K NVLLD + K+ D+G+ + L P + ++ F GT Y AP
Sbjct: 122 LHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSXFCGTPNYIAP 175
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKG 526
E VD ++ GVL+ E+++G + G
Sbjct: 176 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 210
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 71
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 72 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 130
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 131 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 184
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 219
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 72
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 73 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 131
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 132 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 185
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 220
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAY 433
+H L+ L C L V EY+ L F +R RF + L Y
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQRKLPEEHARF-YSAEISLALNY 125
Query: 434 LHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLAR--LLPENQSHLSTKFAGTLGYTAP 491
LHE II+RD+K NVLLD + K+ D+G+ + L P + ++ F GT Y AP
Sbjct: 126 LHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSXFCGTPNYIAP 179
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKG 526
E VD ++ GVL+ E+++G + G
Sbjct: 180 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 214
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 22/207 (10%)
Query: 320 KFSEENKLGEGGFGDIY-KGTLKNGKIVAVKKLAIG--ISRRTLSDFENEVRLISNVHHR 376
+F LG G FG + ++ G A+K L + + + NE R++ V+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTARGL 431
L++L L +V EY + L F E Q I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT----F 154
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAP 491
YLH + +I+RD+KP N+++D ++ DFG A+ + L GT Y AP
Sbjct: 155 EYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAP 207
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISG 518
E + ++ VD ++ GVL+ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 106
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 107 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 165
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 166 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 219
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 220 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 254
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 68 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 126
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 127 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 180
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 215
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 68 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 126
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 127 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 180
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 215
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 22/207 (10%)
Query: 320 KFSEENKLGEGGFGDIY-KGTLKNGKIVAVKKLAIG--ISRRTLSDFENEVRLISNVHHR 376
+F LG G FG + ++ G A+K L + + + NE R++ V+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTARGL 431
L +L L +V EY + L F E Q I+L
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT----F 155
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAP 491
YLH + +I+RD+KP N+++D K+ DFG A+ + L GT Y AP
Sbjct: 156 EYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL----CGTPEYLAP 208
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISG 518
E + ++ VD ++ GVL+ E+ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 22/207 (10%)
Query: 320 KFSEENKLGEGGFGDIY-KGTLKNGKIVAVKKLAIG--ISRRTLSDFENEVRLISNVHHR 376
+F LG G FG + ++ G A+K L + + + NE R++ V+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTARGL 431
L +L L +V EY + L F E Q I+L
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT----F 155
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAP 491
YLH + +I+RD+KP N+++D K+ DFG A+ + L GT Y AP
Sbjct: 156 EYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL----CGTPEYLAP 208
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISG 518
E + ++ VD ++ GVL+ E+ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 86/199 (43%), Gaps = 13/199 (6%)
Query: 327 LGEGGFGDIYKGTLK-NGKIVAVKKLA-IGISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
+G G FG++ K + K+ A+K L+ + +R+ S F E R I + + L C
Sbjct: 83 IGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFC 142
Query: 385 CSQGPE-LILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
Q + L +V EYM L L W + + TA + L + +I
Sbjct: 143 AFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFY-----TAEVVLALDAIHSMGLI 196
Query: 444 HRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY----AIHGQL 499
HRD+KP N+LLD K+ADFG + E GT Y +PE G
Sbjct: 197 HRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYY 256
Query: 500 SEKVDAYSFGVLVLEIISG 518
+ D +S GV + E++ G
Sbjct: 257 GRECDWWSVGVFLFEMLVG 275
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 102/239 (42%), Gaps = 28/239 (11%)
Query: 303 LQGPVNYRLKDLVSATRKFSEENKLGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLS 361
QGP +K+ ++ LG GGFG +Y G + + VA+K + + +S
Sbjct: 18 FQGP---HMKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRIS 70
Query: 362 DF---------ENEVRLISNVH--HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGE 410
D+ EV L+ V +IRLL + +L+ E D F F
Sbjct: 71 DWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT 129
Query: 411 KRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLAR 469
+RG+L + + + H + ++HRDIK N+L+D + + K+ DFG
Sbjct: 130 ERGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGA 186
Query: 470 LLPENQSHLSTKFAGTLGYTAPEYA-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
LL + + T F GT Y+ PE+ H +S G+L+ +++ G E E
Sbjct: 187 LLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 242
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 28/210 (13%)
Query: 320 KFSEENKLGEGGFGDIY------KGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNV 373
+F LG G FG + G KI+ +K+ + + + NE R++ V
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV---VKLKQIEHTLNEKRILQAV 98
Query: 374 HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTA 428
+ L++L L +V EY+A + L F E Q I+L
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ---IVLT-- 153
Query: 429 RGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
YLH + +I+RD+KP N+L+D ++ DFG A+ + L GT
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEA 204
Query: 489 TAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
APE + ++ VD ++ GVL+ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 68 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 126
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 127 H---NXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 180
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 215
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 22/207 (10%)
Query: 320 KFSEENKLGEGGFGDIY-KGTLKNGKIVAVKKLAIG--ISRRTLSDFENEVRLISNVHHR 376
+F LG G FG + ++ G A+K L + + + NE R++ V+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 377 NLIRLLGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTARGL 431
L +L L +V EY + L F E Q I+L
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQ---IVLT----F 155
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAP 491
YLH + +I+RD+KP N+++D K+ DFG A+ + L GT Y AP
Sbjct: 156 EYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL----CGTPEYLAP 208
Query: 492 EYAIHGQLSEKVDAYSFGVLVLEIISG 518
E + ++ VD ++ GVL+ E+ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 327 LGEGGFGDIYKGT-LKNGKIVAVKKLAIGISRRTLSDF---------ENEVRLISNVH-- 374
LG GGFG +Y G + + VA+K + + +SD+ EV L+ V
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKH----VEKDRISDWGELPNGTRVPMEVVLLKKVSSG 119
Query: 375 HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYL 434
+IRLL + +L+ E D F F +RG+L + + +
Sbjct: 120 FSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 178
Query: 435 HEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y+ PE+
Sbjct: 179 H---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW 232
Query: 494 A-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
H +S G+L+ +++ G E E
Sbjct: 233 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 267
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 21/202 (10%)
Query: 326 KLGEGGFGDIYKGT-LKNGKIVAVKKLAIGIS----RRTLSDFENEVRLISNVHHRNLIR 380
+LG G +G + K + +G+I AVK++ ++ +R L D + R V +
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXR---TVDCPFTVT 97
Query: 381 LLGCCSQGPELILVYEYMANSSLDKFL--FGEKRGSLNWKQRFDIILGTARGLAYLHEDF 438
G + ++ + E + ++SLDKF +K ++ I + + L +LH
Sbjct: 98 FYGALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 156
Query: 439 HVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQ 498
V IHRD+KPSNVL++ Q K DFG++ L ++ + AG Y APE I+ +
Sbjct: 157 SV--IHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID--AGCKPYXAPE-RINPE 211
Query: 499 LSE-----KVDAYSFGVLVLEI 515
L++ K D +S G+ +E+
Sbjct: 212 LNQKGYSVKSDIWSLGITXIEL 233
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 110/248 (44%), Gaps = 41/248 (16%)
Query: 288 KSKKIQRGNISEATELQGPVNYRLKDLVSATRKFSEENKLGEGGFGDIYKGTLKNGKIVA 347
K + R I+E +Q P Y ++ +S+ G +G + G G VA
Sbjct: 5 KGEAAMRDLIAELHAMQSP--YTVQRFISS------------GSYGAVCAGVDSEGIPVA 50
Query: 348 VKKL----AIGISRRTLSD------FENEVRLISNVHHRNLIRLLGCCSQGPE-----LI 392
+K++ + G + LSD E+RL+++ HH N++ L E L
Sbjct: 51 IKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLY 110
Query: 393 LVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNV 452
LV E M + L + + ++R ++ + + GL LHE ++HRD+ P N+
Sbjct: 111 LVTELM-RTDLAQVI-HDQRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNI 165
Query: 453 LLDDDLQPKIADFGLAR--LLPENQSHLSTKFAGTLGYTAPEYAIHGQ-LSEKVDAYSFG 509
LL D+ I DF LAR N++H T Y APE + + ++ VD +S G
Sbjct: 166 LLADNNDITICDFNLAREDTADANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAG 221
Query: 510 VLVLEIIS 517
++ E+ +
Sbjct: 222 CVMAEMFN 229
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 110/248 (44%), Gaps = 41/248 (16%)
Query: 288 KSKKIQRGNISEATELQGPVNYRLKDLVSATRKFSEENKLGEGGFGDIYKGTLKNGKIVA 347
K + R I+E +Q P Y ++ +S+ G +G + G G VA
Sbjct: 5 KGEAAMRDLIAELHAMQSP--YTVQRFISS------------GSYGAVCAGVDSEGIPVA 50
Query: 348 VKKL----AIGISRRTLSD------FENEVRLISNVHHRNLIRLLGCCSQGPE-----LI 392
+K++ + G + LSD E+RL+++ HH N++ L E L
Sbjct: 51 IKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLY 110
Query: 393 LVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNV 452
LV E M + L + + ++R ++ + + GL LHE ++HRD+ P N+
Sbjct: 111 LVTELM-RTDLAQVI-HDQRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNI 165
Query: 453 LLDDDLQPKIADFGLAR--LLPENQSHLSTKFAGTLGYTAPEYAIHGQ-LSEKVDAYSFG 509
LL D+ I DF LAR N++H T Y APE + + ++ VD +S G
Sbjct: 166 LLADNNDITICDFNLAREDTADANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAG 221
Query: 510 VLVLEIIS 517
++ E+ +
Sbjct: 222 CVMAEMFN 229
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 24/203 (11%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVAVKKLAI-GISRRTLSDFENEVRLISNVHHRNLIRLLGC 384
KL E G+++KG + IV VK L + S R DF E + H N++ +LG
Sbjct: 17 KLNENHSGELWKGRWQGNDIV-VKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGA 75
Query: 385 C--SQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
C P L+ +M SL L ++ Q L ARG+A+LH I
Sbjct: 76 CQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT-LEPLI 134
Query: 443 IHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEK 502
+ +V++D+D+ +I+ + + F AP + L +K
Sbjct: 135 PRHALNSRSVMIDEDMTARIS-----------MADVKFSFQSPGRMYAPAWVAPEALQKK 183
Query: 503 --------VDAYSFGVLVLEIIS 517
D +SF VL+ E+++
Sbjct: 184 PEDTNRRSADMWSFAVLLWELVT 206
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 13/196 (6%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCCS 386
LG G FG +++ + K + K + + + E+ +++ HRN++ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKF-VKVKGTDQVLVKKEISILNIARHRNILHLHESFE 71
Query: 387 QGPELILVYEYMANSSLDKF-LFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHR 445
EL++++E++ S LD F LN ++ + L +LH I H
Sbjct: 72 SMEELVMIFEFI--SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHF 126
Query: 446 DIKPSNVLLDDDLQP--KIADFGLARLL-PENQSHLSTKFAGTLGYTAPEYAIHGQLSEK 502
DI+P N++ KI +FG AR L P + L Y APE H +S
Sbjct: 127 DIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL---LFTAPEYYAPEVHQHDVVSTA 183
Query: 503 VDAYSFGVLVLEIISG 518
D +S G LV ++SG
Sbjct: 184 TDMWSLGTLVYVLLSG 199
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 100/237 (42%), Gaps = 37/237 (15%)
Query: 344 KIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSL 403
KIV V K T D + E + + H +++ LL S L +V+E+M + L
Sbjct: 57 KIVDVAKFTSSPGLST-EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL 115
Query: 404 ---------DKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLL 454
F++ E S +Q + L Y H++ IIHRD+KP VLL
Sbjct: 116 CFEIVKRADAGFVYSEAVASHYMRQILE-------ALRYCHDN---NIIHRDVKPHCVLL 165
Query: 455 ---DDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVL 511
++ K+ FG+A L E+ ++ GT + APE + VD + GV+
Sbjct: 166 ASKENSAPVKLGGFGVAIQLGES-GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVI 224
Query: 512 VLEIISGTKS-SETKGEEGEYLLKRAWRLYENGTHWELMDES----------LDPNE 557
+ ++SG TK E ++K +++ N W + ES LDP E
Sbjct: 225 LFILLSGCLPFYGTKERLFEGIIKGKYKM--NPRQWSHISESAKDLVRRMLMLDPAE 279
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 117/284 (41%), Gaps = 44/284 (15%)
Query: 327 LGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRT---LSDFENEVRLISNVHHRNLIRLLG 383
+G+G FG +Y G VA++ I I R L F+ EV H N++ +G
Sbjct: 41 IGKGRFGQVYHGRWHGE--VAIR--LIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 384 CCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRII 443
C P L ++ +L + + + L+ + I +G+ YLH I+
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYS-VVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GIL 152
Query: 444 HRDIKPSNVLLDDDLQPKIADFGL---ARLLPENQSHLSTKFA-GTLGYTAPEYAIHGQL 499
H+D+K NV D+ + I DFGL + +L + + G L + APE I QL
Sbjct: 153 HKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPE--IIRQL 209
Query: 500 -----------SEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTHWEL 548
S+ D ++ G + E+ + +T+ E +++ GT
Sbjct: 210 SPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA--------IIWQMGT---- 257
Query: 549 MDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALLK 592
+ PN +++ +I L C RPT ++++ +L+
Sbjct: 258 ---GMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 17/142 (11%)
Query: 357 RRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPE--LILVYEYMANSSLDKFL----FGE 410
R + E+ ++ + H N+++L+ E L +V+E + + + E
Sbjct: 77 RGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSE 136
Query: 411 KRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
+ ++ D+I +G+ YLH + +IIHRDIKPSN+L+ +D KIADFG++
Sbjct: 137 DQARFYFQ---DLI----KGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186
Query: 471 LPENQSHLSTKFAGTLGYTAPE 492
+ + LS GT + APE
Sbjct: 187 FKGSDALLSNT-VGTPAFMAPE 207
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 350 KLAIGISRRTLSDFENEVRLISNV-HHRNLIRLLGCCSQGPELILVYEYMANSSL-DKFL 407
+ A+ I ++ D E+ ++ H N+I L G + +V E M L DK L
Sbjct: 49 EFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL 108
Query: 408 ----FGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVL-LDDDLQP-- 460
F E+ S ++ + + YLH ++HRD+KPSN+L +D+ P
Sbjct: 109 RQKFFSEREASA-------VLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPES 158
Query: 461 -KIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
+I DFG A+ L L T T + APE D +S GVL+ +++G
Sbjct: 159 IRICDFGFAKQLRAENGLLMTP-CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 100/237 (42%), Gaps = 37/237 (15%)
Query: 344 KIVAVKKLAIGISRRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSL 403
KIV V K T D + E + + H +++ LL S L +V+E+M + L
Sbjct: 55 KIVDVAKFTSSPGLST-EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL 113
Query: 404 ---------DKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLL 454
F++ E S +Q + L Y H++ IIHRD+KP VLL
Sbjct: 114 CFEIVKRADAGFVYSEAVASHYMRQILE-------ALRYCHDN---NIIHRDVKPHCVLL 163
Query: 455 ---DDDLQPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVL 511
++ K+ FG+A L E+ ++ GT + APE + VD + GV+
Sbjct: 164 ASKENSAPVKLGGFGVAIQLGES-GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVI 222
Query: 512 VLEIISGTKS-SETKGEEGEYLLKRAWRLYENGTHWELMDES----------LDPNE 557
+ ++SG TK E ++K +++ N W + ES LDP E
Sbjct: 223 LFILLSGCLPFYGTKERLFEGIIKGKYKM--NPRQWSHISESAKDLVRRMLMLDPAE 277
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 57/238 (23%)
Query: 321 FSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIG----ISRRTLSDFENEVRLISNVH-- 374
F E+K+GEG F +Y +A +L +G I+ + L + +R+ + +
Sbjct: 23 FKIEDKIGEGTFSSVY---------LATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCL 73
Query: 375 -----HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
N++ + C + +++ Y+ + S L SL++++ + +L +
Sbjct: 74 TVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDIL-----NSLSFQEVREYMLNLFK 128
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLDDDLQP-KIADFGLAR--------LLPENQSH--- 477
L +H+ I+HRD+KPSN L + L+ + DFGLA+ LL QS
Sbjct: 129 ALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQ 185
Query: 478 -----------LSTK-----FAGTLGYTAPEYAIH-GQLSEKVDAYSFGVLVLEIISG 518
LS + AGT G+ APE + +D +S GV+ L ++SG
Sbjct: 186 ERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSG 243
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 109/262 (41%), Gaps = 72/262 (27%)
Query: 303 LQGPVNYRLKDLVSATRKFSEENKLGEGGFGDIYKGTLKNG-KIVAVKKLAIGISRRTLS 361
++ P NY +K L+ G G +G +Y KN K VA+KK+ R
Sbjct: 24 VKVPDNYEIKHLI------------GRGSYGYVYLAYDKNANKNVAIKKV-----NRMFE 66
Query: 362 DFEN------EVRLISNVHHRNLIRLLGCCS-----QGPELILVYEYMANSSLDKFLFGE 410
D + E+ +++ + +IRL + EL +V E +A+S L K
Sbjct: 67 DLIDCKRILREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLF--- 122
Query: 411 KRGSLNWKQRFDIIL-GTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLAR 469
K +Q IL G ++HE IIHRD+KP+N LL+ D KI DFGLAR
Sbjct: 123 KTPIFLTEQHVKTILYNLLLGEKFIHES---GIIHRDLKPANCLLNQDCSVKICDFGLAR 179
Query: 470 LL----------------------PENQ-------SHLSTKFAGTLGYTAPEYA-IHGQL 499
+ P N+ SH+ T++ Y APE +
Sbjct: 180 TINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRW-----YRAPELILLQENY 234
Query: 500 SEKVDAYSFGVLVLEIISGTKS 521
+ +D +S G + E+++ KS
Sbjct: 235 TNSIDIWSTGCIFAELLNMMKS 256
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 88/217 (40%), Gaps = 15/217 (6%)
Query: 310 RLKDLVSATRKFSEENKLGEGGFGDI----YKGTLKNGKIVAVKKLAIGISRRTLSDFEN 365
+++DL + +G G FG++ +K T K + + K + I R + F
Sbjct: 60 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM-IKRSDSAFFWE 118
Query: 366 EVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIIL 425
E +++ + +++L L +V EYM L L W + +
Sbjct: 119 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFY---- 173
Query: 426 GTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGT 485
TA + L + IHRD+KP N+LLD K+ADFG + + GT
Sbjct: 174 -TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 232
Query: 486 LGYTAPEY----AIHGQLSEKVDAYSFGVLVLEIISG 518
Y +PE G + D +S GV + E++ G
Sbjct: 233 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 427 TARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHL---STKFA 483
ARG+ +L + IHRD+ N+LL ++ KI DFGLAR + +N ++ T+
Sbjct: 208 VARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 484 GTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIIS 517
L + APE S K D +S+GVL+ EI S
Sbjct: 265 --LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 327 LGEGGFGDIYKGT---LKNG---KIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
LG G FG + + + +K + VAVK L G + E+++++++ HH N++
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 380 RLLGCCS-QGPELILVYEYMANSSLDKFL 407
LLG C+ QG L+++ EY +L +L
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 12/230 (5%)
Query: 297 ISEATELQGPVNYRLKDLVSATRKFSEENKLGEGGFGDIYKGTLKNG-KIVAVKKLAIG- 354
++E E P +K++ F +G G FG++ +KN +I A+K L
Sbjct: 68 VAEFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWE 127
Query: 355 -ISRRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRG 413
+ R + F E ++ N + + L L LV +Y L L +
Sbjct: 128 MLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK 187
Query: 414 SLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPE 473
RF I + +H+ + +HRDIKP NVLLD + ++ADFG + +
Sbjct: 188 LPEDMARF-YIGEMVLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMND 243
Query: 474 NQSHLSTKFAGTLGYTAPEYAI-----HGQLSEKVDAYSFGVLVLEIISG 518
+ + S+ GT Y +PE G+ + D +S GV + E++ G
Sbjct: 244 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 293
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 88/217 (40%), Gaps = 15/217 (6%)
Query: 310 RLKDLVSATRKFSEENKLGEGGFGDI----YKGTLKNGKIVAVKKLAIGISRRTLSDFEN 365
+++DL + +G G FG++ +K T K + + K + I R + F
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM-IKRSDSAFFWE 123
Query: 366 EVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIIL 425
E +++ + +++L L +V EYM L L W + +
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFY---- 178
Query: 426 GTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGT 485
TA + L + IHRD+KP N+LLD K+ADFG + + GT
Sbjct: 179 -TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 237
Query: 486 LGYTAPEY----AIHGQLSEKVDAYSFGVLVLEIISG 518
Y +PE G + D +S GV + E++ G
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 107/257 (41%), Gaps = 57/257 (22%)
Query: 314 LVSATRKFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAI-------GISRRTLSDFENE 366
L+ +K+ + +G+G +G + + ++N + A++ + I I+ + + + E
Sbjct: 21 LLELQKKYHLKGAIGQGSYG-VVRVAIEN-QTRAIRAIKIMNKNKIRQINPKDVERIKTE 78
Query: 367 VRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSL-DKF-LFGEK------------- 411
VRL+ +HH N+ RL + LV E L DK +F +
Sbjct: 79 VRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQ 138
Query: 412 -------------------RGSLNWKQRFDIILGTAR----GLAYLHEDFHVRIIHRDIK 448
R SL++ QR +I R L YLH I HRDIK
Sbjct: 139 ICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIK 195
Query: 449 PSNVLL--DDDLQPKIADFGLAR---LLPENQSHLSTKFAGTLGYTAPEY--AIHGQLSE 501
P N L + + K+ DFGL++ L + + T AGT + APE +
Sbjct: 196 PENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255
Query: 502 KVDAYSFGVLVLEIISG 518
K DA+S GVL+ ++ G
Sbjct: 256 KCDAWSAGVLLHLLLMG 272
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 12/230 (5%)
Query: 297 ISEATELQGPVNYRLKDLVSATRKFSEENKLGEGGFGDIYKGTLKNG-KIVAVKKLAIG- 354
++E E P +K++ F +G G FG++ +KN +I A+K L
Sbjct: 52 VAEFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWE 111
Query: 355 -ISRRTLSDFENEVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRG 413
+ R + F E ++ N + + L L LV +Y L L +
Sbjct: 112 MLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK 171
Query: 414 SLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPE 473
RF I + +H+ + +HRDIKP NVLLD + ++ADFG + +
Sbjct: 172 LPEDMARF-YIGEMVLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMND 227
Query: 474 NQSHLSTKFAGTLGYTAPEYAI-----HGQLSEKVDAYSFGVLVLEIISG 518
+ + S+ GT Y +PE G+ + D +S GV + E++ G
Sbjct: 228 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 277
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 88/217 (40%), Gaps = 15/217 (6%)
Query: 310 RLKDLVSATRKFSEENKLGEGGFGDI----YKGTLKNGKIVAVKKLAIGISRRTLSDFEN 365
+++DL + +G G FG++ +K T K + + K + I R + F
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM-IKRSDSAFFWE 123
Query: 366 EVRLISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIIL 425
E +++ + +++L L +V EYM L L W + +
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFY---- 178
Query: 426 GTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAGT 485
TA + L + IHRD+KP N+LLD K+ADFG + + GT
Sbjct: 179 -TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 237
Query: 486 LGYTAPEY----AIHGQLSEKVDAYSFGVLVLEIISG 518
Y +PE G + D +S GV + E++ G
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 10/134 (7%)
Query: 390 ELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKP 449
E+IL+ EY A + E ++ +I G+ YLH++ I+H D+KP
Sbjct: 103 EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKP 159
Query: 450 SNVLLDDDLQP----KIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDA 505
N+LL + P KI DFG++R + + + GT Y APE + ++ D
Sbjct: 160 QNILLSS-IYPLGDIKIVDFGMSRKI--GHACELREIMGTPEYLAPEILNYDPITTATDM 216
Query: 506 YSFGVLVLEIISGT 519
++ G++ +++ T
Sbjct: 217 WNIGIIAYMLLTHT 230
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 18/166 (10%)
Query: 427 TARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG-T 485
A+G+ +L + IHRD+ N+LL + KI DFGLAR + ++ ++ A
Sbjct: 202 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 486 LGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTH 545
L + APE + + D +SFGVL+ EI S S + E +R + GT
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----LKEGTR 314
Query: 546 WELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P+ T E + +++ C + RPT SE+V L
Sbjct: 315 MRA------PDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 350
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 327 LGEGGFGDIYK----GTLKNG--KIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
LG G FG + + G K + VAVK L G + +E++++ ++ HH N++
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 380 RLLGCCSQ-GPELILVYEYMANSSLDKFLFGEKRGSLNWKQR 420
LLG C++ G L+++ E+ +L +L ++ + +K +
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTK 131
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 18/166 (10%)
Query: 427 TARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG-T 485
A+G+ +L + IHRD+ N+LL + KI DFGLAR + ++ ++ A
Sbjct: 200 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 486 LGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTH 545
L + APE + + D +SFGVL+ EI S S + E +R + GT
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----LKEGTR 312
Query: 546 WELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P+ T E + +++ C + RPT SE+V L
Sbjct: 313 MRA------PDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 348
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 327 LGEGGFGDIYK----GTLKNG--KIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
LG G FG + + G K + VAVK L G + +E++++ ++ HH N++
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 380 RLLGCCSQ-GPELILVYEYMANSSLDKFLFGEKRGSLNWKQR 420
LLG C++ G L+++ E+ +L +L ++ + +K +
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTK 129
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 86/201 (42%), Gaps = 24/201 (11%)
Query: 326 KLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSD---FENEVRLISNVHHRNLIRLL 382
++G G F +YKG L V V + + T S+ F+ E + + H N++R
Sbjct: 33 EIGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFY 91
Query: 383 GCCSQGPE----LILVYEYMANSSLDKFLFGEKRGSL----NWKQRFDIILGTARGLAYL 434
+ ++LV E + +L +L K + +W ++ +GL +L
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFL 145
Query: 435 HEDFHVRIIHRDIKPSNVLLDDDL-QPKIADFGLARLLPENQSHLSTKFAGTLGYTAPEY 493
H IIHRD+K N+ + KI D GLA L ++ + GT + APE
Sbjct: 146 HTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTPEFXAPE- 200
Query: 494 AIHGQLSEKVDAYSFGVLVLE 514
+ E VD Y+FG LE
Sbjct: 201 XYEEKYDESVDVYAFGXCXLE 221
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 18/166 (10%)
Query: 427 TARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG-T 485
A+G+ +L + IHRD+ N+LL + KI DFGLAR + ++ ++ A
Sbjct: 209 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 486 LGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTH 545
L + APE + + D +SFGVL+ EI S S + E +R + GT
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----LKEGTR 321
Query: 546 WELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P+ T E + +++ C + RPT SE+V L
Sbjct: 322 MRA------PDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 357
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 327 LGEGGFGDIYK----GTLKNG--KIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
LG G FG + + G K + VAVK L G + +E++++ ++ HH N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 380 RLLGCCSQ-GPELILVYEYMANSSLDKFLFGEKRGSLNWKQR 420
LLG C++ G L+++ E+ +L +L ++ + +K +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTK 138
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 18/166 (10%)
Query: 427 TARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLLPENQSHLSTKFAG-T 485
A+G+ +L + IHRD+ N+LL + KI DFGLAR + ++ ++ A
Sbjct: 207 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 486 LGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISGTKSSETKGEEGEYLLKRAWRLYENGTH 545
L + APE + + D +SFGVL+ EI S S + E +R + GT
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----LKEGTR 319
Query: 546 WELMDESLDPNECTKEAAEKVVEIALMCTQSAANSRPTMSEVVALL 591
P+ T E + +++ C + RPT SE+V L
Sbjct: 320 MRA------PDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 355
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 327 LGEGGFGDIYK----GTLKNG--KIVAVKKLAIGISRRTLSDFENEVRLISNV-HHRNLI 379
LG G FG + + G K + VAVK L G + +E++++ ++ HH N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 380 RLLGCCSQ-GPELILVYEYMANSSLDKFLFGEKRGSLNWKQR 420
LLG C++ G L+++ E+ +L +L ++ + +K +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTK 136
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 28/211 (13%)
Query: 327 LGEGGFGDIYKG-TLKNGKIVAVKKL--AIGISR-RTLSDFENEVRLISNVHHRNLIRLL 382
LGEG + + +L+NGK AVK + G SR R + E + N +N++ L+
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGN---KNILELI 77
Query: 383 GCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRI 442
LV+E + S+ + +K+ N ++ ++ A L +LH I
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHI--QKQKHFNEREASRVVRDVAAALDFLHTK---GI 132
Query: 443 IHRDIKPSNVLLD--DDLQP-KIADFGLARLLPENQS-------HLSTKFAGTLGYTAPE 492
HRD+KP N+L + + + P KI DF L + N S L+T G+ Y APE
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTP-CGSAEYMAPE 191
Query: 493 ----YAIHGQLSEK-VDAYSFGVLVLEIISG 518
+ +K D +S GV++ ++SG
Sbjct: 192 VVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 108/243 (44%), Gaps = 52/243 (21%)
Query: 320 KFSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFEN------EVRLISN 372
++ + +G G +G + + K ++VA+KK+ R D + E+ +++
Sbjct: 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKIL-----RVFEDLIDCKRILREIAILNR 108
Query: 373 VHHRNLIRLLGCC-----SQGPELILVYEYMANSSLDK-FLFGEKRGSLNWKQRFDIILG 426
++H +++++L + EL +V E +A+S K F L+ K ++
Sbjct: 109 LNHDHVVKVLDIVIPKDVEKFDELYVVLE-IADSDFKKLFRTPVYLTELHIKT---LLYN 164
Query: 427 TARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL--PEN---------- 474
G+ Y+H I+HRD+KP+N L++ D K+ DFGLAR + PEN
Sbjct: 165 LLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPR 221
Query: 475 -----------QSHLSTKFAG---TLGYTAPEYA-IHGQLSEKVDAYSFGVLVLEIISGT 519
+L + G T Y APE + +E +D +S G + E+++
Sbjct: 222 EDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMI 281
Query: 520 KSS 522
K +
Sbjct: 282 KEN 284
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 93/218 (42%), Gaps = 31/218 (14%)
Query: 327 LGEGGFG--DIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRLISN---VHHRNLIRL 381
+G G FG + + L ++VAVK + G + EN R I N + H N++R
Sbjct: 28 IGSGNFGVARLMRDKLTK-ELVAVKYIERGAAID-----ENVQREIINHRSLRHPNIVRF 81
Query: 382 LGCCSQGPELILVYEYMANSSLDKFL-----FGEKRGSLNWKQRFDIILGTARGLAYLHE 436
L ++ EY + L + + F E ++Q G++Y H
Sbjct: 82 KEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLS-------GVSYCHS 134
Query: 437 DFHVRIIHRDIKPSNVLLDDDLQP--KIADFGLARLLPENQSHLSTKFAGTLGYTAPEYA 494
++I HRD+K N LLD P KI DFG ++ + ST GT Y APE
Sbjct: 135 ---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL 189
Query: 495 IHGQLSEKV-DAYSFGVLVLEIISGTKSSETKGEEGEY 531
+ + K+ D +S GV + ++ G E E +Y
Sbjct: 190 LRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY 227
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 95/220 (43%), Gaps = 31/220 (14%)
Query: 310 RLKDLVSATRKFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIGISRRTLSDFENEVRL 369
R+ D + K E++++ + +G++ GT ++V +KK++ G S
Sbjct: 72 RVSDNLPVAIKHVEKDRISD--WGELPNGTRVPMEVVLLKKVSSGFS------------- 116
Query: 370 ISNVHHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTAR 429
+IRLL + +L+ E D F F +RG+L +
Sbjct: 117 -------GVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE 168
Query: 430 GLAYLHEDFHVRIIHRDIKPSNVLLD-DDLQPKIADFGLARLLPENQSHLSTKFAGTLGY 488
+ + H + ++HRDIK N+L+D + + K+ DFG LL + + T F GT Y
Sbjct: 169 AVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 222
Query: 489 TAPEYA-IHGQLSEKVDAYSFGVLVLEIISGTKSSETKGE 527
+ PE+ H +S G+L+ +++ G E E
Sbjct: 223 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 262
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 11/192 (5%)
Query: 305 GPVNYRLKDLVSATRKFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIG-ISRRTLSDF 363
G N + + R +S ++G GG +++ + +I A+K + + +TL +
Sbjct: 14 GTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSY 73
Query: 364 ENEVRLISNV--HHRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRF 421
NE+ ++ + H +IRL + +V E N L+ +L +K+ S++ +R
Sbjct: 74 RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL--KKKKSIDPWERK 130
Query: 422 DIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLA-RLLPENQSHLST 480
+ +H+ I+H D+KP+N L+ D + K+ DFG+A ++ P+ S +
Sbjct: 131 SYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKD 186
Query: 481 KFAGTLGYTAPE 492
GT+ Y PE
Sbjct: 187 SQVGTVNYMPPE 198
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 319 RKFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIG-ISRRTLSDFENEVRLISNV--HH 375
R +S ++G GG +++ + +I A+K + + +TL + NE+ ++ + H
Sbjct: 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115
Query: 376 RNLIRLLGCCSQGPELILVYEYMA----NSSLDKFLFGEKRGSLNWKQRFDIILGTARGL 431
+IRL E+ Y YM N L+ +L +K+ S++ +R +
Sbjct: 116 DKIIRLYDY-----EITDQYIYMVMECGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAV 168
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLA-RLLPENQSHLSTKFAGTLGYTA 490
+H+ I+H D+KP+N L+ D + K+ DFG+A ++ P+ S + GT+ Y
Sbjct: 169 HTIHQH---GIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 224
Query: 491 PE 492
PE
Sbjct: 225 PE 226
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 319 RKFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIG-ISRRTLSDFENEVRLISNV--HH 375
R +S ++G GG +++ + +I A+K + + +TL + NE+ ++ + H
Sbjct: 12 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 71
Query: 376 RNLIRLLGCCSQGPELILVYEYMA----NSSLDKFLFGEKRGSLNWKQRFDIILGTARGL 431
+IRL E+ Y YM N L+ +L +K+ S++ +R +
Sbjct: 72 DKIIRLYDY-----EITDQYIYMVMECGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAV 124
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLA-RLLPENQSHLSTKFAGTLGYTA 490
+H+ I+H D+KP+N L+ D + K+ DFG+A ++ P+ S + GT+ Y
Sbjct: 125 HTIHQH---GIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 180
Query: 491 PE 492
PE
Sbjct: 181 PE 182
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 318 TRKFSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVH-- 374
T +F E K+G G FG ++K + +G I A+K+ S++ L+ +E + V+
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR-----SKKPLAGSVDEQNALREVYAH 62
Query: 375 -----HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQR--FDIILGT 427
H +++R ++ +++ EY SL + R +K+ D++L
Sbjct: 63 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 122
Query: 428 ARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIA 463
RGL Y+H + ++H DIKPSN+ + P A
Sbjct: 123 GRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAA 155
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 319 RKFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIG-ISRRTLSDFENEVRLISNV--HH 375
R +S ++G GG +++ + +I A+K + + +TL + NE+ ++ + H
Sbjct: 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115
Query: 376 RNLIRLLGCCSQGPELILVYEYMA----NSSLDKFLFGEKRGSLNWKQRFDIILGTARGL 431
+IRL E+ Y YM N L+ +L +K+ S++ +R +
Sbjct: 116 DKIIRLYDY-----EITDQYIYMVMECGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAV 168
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLA-RLLPENQSHLSTKFAGTLGYTA 490
+H+ I+H D+KP+N L+ D + K+ DFG+A ++ P+ S + GT+ Y
Sbjct: 169 HTIHQH---GIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 224
Query: 491 PE 492
PE
Sbjct: 225 PE 226
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 18/147 (12%)
Query: 318 TRKFSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVH-- 374
T +F E K+G G FG ++K + +G I A+K+ S++ L+ +E + V+
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR-----SKKPLAGSVDEQNALREVYAH 62
Query: 375 -----HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQR--FDIILGT 427
H +++R ++ +++ EY SL + R +K+ D++L
Sbjct: 63 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 122
Query: 428 ARGLAYLHEDFHVRIIHRDIKPSNVLL 454
RGL Y+H + ++H DIKPSN+ +
Sbjct: 123 GRGLRYIHS---MSLVHMDIKPSNIFI 146
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 16/106 (15%)
Query: 423 IILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARLL---PENQSHLS 479
I + A + +LH ++HRD+KPSN+ D K+ DFGL + E Q+ L+
Sbjct: 169 IFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 480 TKFA--------GTLGYTAPEYAIHG-QLSEKVDAYSFGVLVLEII 516
A GT Y +PE IHG S KVD +S G+++ E++
Sbjct: 226 PMPAYATHXGQVGTKLYMSPE-QIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 318 TRKFSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVH-- 374
T +F E K+G G FG ++K + +G I A+K+ S++ L+ +E + V+
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR-----SKKPLAGSVDEQNALREVYAH 64
Query: 375 -----HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQR--FDIILGT 427
H +++R ++ +++ EY SL + R +K+ D++L
Sbjct: 65 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 124
Query: 428 ARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIA 463
RGL Y+H + ++H DIKPSN+ + P A
Sbjct: 125 GRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAA 157
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 87/178 (48%), Gaps = 11/178 (6%)
Query: 319 RKFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIG-ISRRTLSDFENEVRLISNV--HH 375
R +S ++G GG +++ + +I A+K + + +TL + NE+ ++ + H
Sbjct: 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68
Query: 376 RNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQRFDIILGTARGLAYLH 435
+IRL + +V E N L+ +L +K+ S++ +R + +H
Sbjct: 69 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIH 125
Query: 436 EDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLA-RLLPENQSHLSTKFAGTLGYTAPE 492
+ I+H D+KP+N L+ D + K+ DFG+A ++ P+ S + GT+ Y PE
Sbjct: 126 QH---GIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 179
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 18/147 (12%)
Query: 318 TRKFSEENKLGEGGFGDIYKGTLK-NGKIVAVKKLAIGISRRTLSDFENEVRLISNVH-- 374
T +F E K+G G FG ++K + +G I A+K+ S++ L+ +E + V+
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR-----SKKPLAGSVDEQNALREVYAH 60
Query: 375 -----HRNLIRLLGCCSQGPELILVYEYMANSSLDKFLFGEKRGSLNWKQR--FDIILGT 427
H +++R ++ +++ EY SL + R +K+ D++L
Sbjct: 61 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 120
Query: 428 ARGLAYLHEDFHVRIIHRDIKPSNVLL 454
RGL Y+H + ++H DIKPSN+ +
Sbjct: 121 GRGLRYIHS---MSLVHMDIKPSNIFI 144
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 67/258 (25%)
Query: 303 LQGPVNYRLKDLVSATRKFSEENKLGEGGFGDIYKGTLKNG-KIVAVKKLAIGISRRTLS 361
+ P NY +K L+ G G +G +Y KN K VA+KK+ R
Sbjct: 22 VHVPDNYIIKHLI------------GRGSYGYVYLAYDKNTEKNVAIKKV-----NRMFE 64
Query: 362 DFEN------EVRLISNVHHRNLIRLLGCCS-----QGPELILVYEYMANSSLDKFLFGE 410
D + E+ +++ + +IRL + EL +V E +A+S L K +
Sbjct: 65 DLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLE-IADSDLKKLF--K 121
Query: 411 KRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLARL 470
L + I+ G ++HE IIHRD+KP+N LL+ D K+ DFGLAR
Sbjct: 122 TPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLART 178
Query: 471 L-------------------PENQ-------SHLSTKFAGTLGYTAPEYA-IHGQLSEKV 503
+ P N+ SH+ T++ Y APE + ++ +
Sbjct: 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRW-----YRAPELILLQENYTKSI 233
Query: 504 DAYSFGVLVLEIISGTKS 521
D +S G + E+++ +S
Sbjct: 234 DIWSTGCIFAELLNMLQS 251
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 21/179 (11%)
Query: 350 KLAIGISRRTLSDFENEVRLISNV-HHRNLIRLLGCCSQGPELILVYEYMANSSL-DKFL 407
+ A+ I ++ D E+ ++ H N+I L G + +V E L DK L
Sbjct: 49 EFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL 108
Query: 408 ----FGEKRGSLNWKQRFDIILGTARGLAYLHEDFHVRIIHRDIKPSNVL-LDDDLQP-- 460
F E+ S ++ + + YLH ++HRD+KPSN+L +D+ P
Sbjct: 109 RQKFFSEREASA-------VLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPES 158
Query: 461 -KIADFGLARLLPENQSHLSTKFAGTLGYTAPEYAIHGQLSEKVDAYSFGVLVLEIISG 518
+I DFG A+ L L T T + APE D +S GVL+ ++G
Sbjct: 159 IRICDFGFAKQLRAENGLLXTP-CYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 319 RKFSEENKLGEGGFGDIYKGTLKNGKIVAVKKLAIG-ISRRTLSDFENEVRLISNV--HH 375
R +S ++G GG +++ + +I A+K + + +TL + NE+ ++ + H
Sbjct: 8 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 67
Query: 376 RNLIRLLGCCSQGPELILVYEYMA----NSSLDKFLFGEKRGSLNWKQRFDIILGTARGL 431
+IRL E+ Y YM N L+ +L +K+ S++ +R +
Sbjct: 68 DKIIRLYDY-----EITDQYIYMVMECGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAV 120
Query: 432 AYLHEDFHVRIIHRDIKPSNVLLDDDLQPKIADFGLA-RLLPENQSHLSTKFAGTLGYTA 490
+H+ I+H D+KP+N L+ D + K+ DFG+A ++ P+ S + GT+ Y
Sbjct: 121 HTIHQH---GIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 176
Query: 491 PE 492
PE
Sbjct: 177 PE 178
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.132 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,417,128
Number of Sequences: 62578
Number of extensions: 736285
Number of successful extensions: 4409
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 197
Number of HSP's that attempted gapping in prelim test: 1707
Number of HSP's gapped (non-prelim): 1159
length of query: 658
length of database: 14,973,337
effective HSP length: 105
effective length of query: 553
effective length of database: 8,402,647
effective search space: 4646663791
effective search space used: 4646663791
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)