Query 006171
Match_columns 658
No_of_seqs 557 out of 3341
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 17:54:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006171.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006171hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3apo_A DNAJ homolog subfamily 100.0 1.3E-45 4.5E-50 435.2 28.8 407 36-549 20-542 (780)
2 3us3_A Calsequestrin-1; calciu 100.0 8E-36 2.7E-40 322.1 26.1 320 137-549 14-348 (367)
3 3apq_A DNAJ homolog subfamily 100.0 2E-37 6.7E-42 308.5 6.7 197 37-253 2-201 (210)
4 1sji_A Calsequestrin 2, calseq 100.0 2.2E-34 7.6E-39 308.5 28.6 319 137-549 12-346 (350)
5 2r2j_A Thioredoxin domain-cont 100.0 6.1E-34 2.1E-38 308.9 22.2 333 135-568 4-346 (382)
6 3f8u_A Protein disulfide-isome 100.0 1.2E-32 4E-37 307.0 28.5 331 137-567 2-350 (481)
7 2b5e_A Protein disulfide-isome 100.0 5.2E-32 1.8E-36 303.8 19.7 334 136-566 14-355 (504)
8 3ed3_A Protein disulfide-isome 99.9 2.5E-27 8.6E-32 248.6 15.5 229 135-378 16-282 (298)
9 3apo_A DNAJ homolog subfamily 99.9 1.5E-24 5E-29 255.7 26.5 287 137-492 441-736 (780)
10 3idv_A Protein disulfide-isome 99.9 5.5E-24 1.9E-28 214.2 17.3 209 136-366 15-238 (241)
11 3q6o_A Sulfhydryl oxidase 1; p 99.9 3.4E-21 1.2E-25 195.4 17.3 209 137-362 13-237 (244)
12 3t58_A Sulfhydryl oxidase 1; o 99.8 2.2E-19 7.5E-24 201.5 18.1 210 137-362 13-237 (519)
13 2ywm_A Glutaredoxin-like prote 99.8 1.4E-18 4.9E-23 173.9 13.4 189 152-363 19-218 (229)
14 3h79_A Thioredoxin-like protei 99.8 2.9E-19 1E-23 162.4 6.6 106 136-252 15-126 (127)
15 3uem_A Protein disulfide-isome 99.8 2E-18 7E-23 184.8 13.9 210 137-364 118-356 (361)
16 1a8l_A Protein disulfide oxido 99.8 2.3E-18 7.9E-23 171.7 12.5 195 152-363 21-224 (226)
17 2och_A Hypothetical protein DN 99.7 9.4E-19 3.2E-23 144.6 5.8 67 36-102 7-73 (73)
18 1hdj_A Human HSP40, HDJ-1; mol 99.7 3.1E-18 1E-22 143.0 6.6 69 36-104 2-72 (77)
19 2o37_A Protein SIS1; HSP40, J- 99.7 4.8E-18 1.6E-22 146.7 4.9 70 36-105 7-76 (92)
20 2ctp_A DNAJ homolog subfamily 99.7 6.3E-18 2.1E-22 141.4 5.2 69 35-103 5-75 (78)
21 2dn9_A DNAJ homolog subfamily 99.7 8E-18 2.7E-22 141.1 5.1 69 35-103 5-76 (79)
22 2ej7_A HCG3 gene; HCG3 protein 99.7 1.4E-17 4.7E-22 140.7 6.1 69 35-103 7-79 (82)
23 2cug_A Mkiaa0962 protein; DNAJ 99.7 1.1E-17 3.9E-22 143.2 4.8 68 36-103 16-85 (88)
24 2dml_A Protein disulfide-isome 99.7 4.7E-17 1.6E-21 147.8 9.2 106 137-254 18-124 (130)
25 2h8l_A Protein disulfide-isome 99.7 1.9E-15 6.6E-20 154.0 21.7 228 256-568 5-247 (252)
26 3zzx_A Thioredoxin; oxidoreduc 99.7 1.1E-17 3.6E-22 148.1 3.2 99 139-252 3-104 (105)
27 2ctr_A DNAJ homolog subfamily 99.7 1.9E-17 6.6E-22 141.7 4.7 69 36-104 6-76 (88)
28 3ec3_A Protein disulfide-isome 99.7 5.8E-15 2E-19 150.5 22.7 228 255-568 4-245 (250)
29 2lgw_A DNAJ homolog subfamily 99.7 2.5E-17 8.5E-22 144.0 4.1 68 37-104 2-73 (99)
30 1bq0_A DNAJ, HSP40; chaperone, 99.7 3.7E-17 1.3E-21 144.2 4.7 69 36-104 2-73 (103)
31 2ctw_A DNAJ homolog subfamily 99.7 6.9E-17 2.4E-21 143.8 6.2 70 36-105 16-88 (109)
32 2ctq_A DNAJ homolog subfamily 99.7 4.1E-17 1.4E-21 146.0 4.4 69 36-104 19-90 (112)
33 2djj_A PDI, protein disulfide- 99.7 1.4E-16 4.9E-21 142.5 7.9 102 137-252 8-115 (121)
34 3ga4_A Dolichyl-diphosphooligo 99.6 1.2E-16 4E-21 154.2 7.0 107 137-252 19-151 (178)
35 2voc_A Thioredoxin; electron t 99.6 1.1E-16 3.8E-21 142.0 6.3 101 138-252 3-103 (112)
36 2dmx_A DNAJ homolog subfamily 99.6 4.6E-17 1.6E-21 140.6 3.5 69 36-104 8-80 (92)
37 1x5d_A Protein disulfide-isome 99.6 6E-17 2.1E-21 147.3 4.5 107 135-254 6-117 (133)
38 2dj1_A Protein disulfide-isome 99.6 1.6E-16 5.5E-21 146.1 6.5 103 137-253 18-123 (140)
39 3gnj_A Thioredoxin domain prot 99.6 6E-17 2.1E-21 142.4 3.4 103 137-252 5-108 (111)
40 2yua_A Williams-beuren syndrom 99.6 1.6E-16 5.5E-21 139.0 5.7 67 36-102 16-85 (99)
41 2dj3_A Protein disulfide-isome 99.6 2.2E-16 7.7E-21 143.9 6.6 106 136-252 7-116 (133)
42 1mek_A Protein disulfide isome 99.6 2.6E-16 8.7E-21 139.8 6.5 105 137-252 8-115 (120)
43 3uvt_A Thioredoxin domain-cont 99.6 6E-17 2E-21 142.3 2.4 104 135-252 4-110 (111)
44 2trx_A Thioredoxin; electron t 99.6 2.2E-16 7.4E-21 138.3 5.4 103 137-252 3-106 (108)
45 1wjz_A 1700030A21RIK protein; 99.6 8.3E-17 2.8E-21 139.5 2.5 66 36-101 15-89 (94)
46 3qou_A Protein YBBN; thioredox 99.6 7E-16 2.4E-20 159.6 9.6 103 137-252 8-112 (287)
47 3tco_A Thioredoxin (TRXA-1); d 99.6 1.5E-16 5.3E-21 138.9 3.9 103 137-252 5-107 (109)
48 3die_A Thioredoxin, TRX; elect 99.6 1.9E-16 6.5E-21 137.9 4.3 102 137-252 4-105 (106)
49 2i4a_A Thioredoxin; acidophIle 99.6 3.3E-16 1.1E-20 136.5 5.3 103 137-252 3-106 (107)
50 2qsa_A DNAJ homolog DNJ-2; J-d 99.6 1.3E-16 4.6E-21 142.0 2.8 68 36-103 14-88 (109)
51 1nsw_A Thioredoxin, TRX; therm 99.6 1.9E-16 6.4E-21 138.0 3.7 102 138-252 2-103 (105)
52 4euy_A Uncharacterized protein 99.6 2.7E-16 9.3E-21 137.7 4.1 98 141-252 6-103 (105)
53 3p2a_A Thioredoxin 2, putative 99.6 4.3E-16 1.5E-20 145.2 5.6 105 137-254 39-143 (148)
54 2o8v_B Thioredoxin 1; disulfid 99.6 3.6E-16 1.2E-20 142.7 4.5 104 136-252 22-126 (128)
55 3hz4_A Thioredoxin; NYSGXRC, P 99.6 3.5E-16 1.2E-20 144.8 4.4 103 137-252 7-110 (140)
56 1t00_A Thioredoxin, TRX; redox 99.6 4.3E-16 1.5E-20 137.5 4.8 103 137-252 6-109 (112)
57 1x5e_A Thioredoxin domain cont 99.6 5.4E-16 1.8E-20 140.2 5.5 102 135-252 6-108 (126)
58 1thx_A Thioredoxin, thioredoxi 99.6 7.7E-16 2.6E-20 136.0 6.3 103 137-252 8-111 (115)
59 3aps_A DNAJ homolog subfamily 99.6 2.1E-16 7.3E-21 141.8 2.5 106 137-255 4-114 (122)
60 2e0q_A Thioredoxin; electron t 99.6 3.7E-16 1.3E-20 134.9 3.7 101 138-252 1-101 (104)
61 2qsi_A Putative hydrogenase ex 99.6 4.1E-16 1.4E-20 143.8 4.1 104 137-253 16-122 (137)
62 2l5l_A Thioredoxin; structural 99.6 9.2E-16 3.1E-20 141.1 6.3 105 136-254 9-126 (136)
63 2yzu_A Thioredoxin; redox prot 99.6 4E-16 1.4E-20 136.1 3.5 103 137-252 2-104 (109)
64 3uem_A Protein disulfide-isome 99.6 1.3E-13 4.6E-18 147.2 23.6 310 137-549 18-357 (361)
65 1oaz_A Thioredoxin 1; immune s 99.6 7.4E-16 2.5E-20 139.7 5.0 103 137-252 4-121 (123)
66 3hxs_A Thioredoxin, TRXP; elec 99.6 9.4E-16 3.2E-20 141.3 5.7 104 136-252 22-137 (141)
67 2ppt_A Thioredoxin-2; thiredox 99.6 5.9E-16 2E-20 146.3 4.2 103 137-252 48-150 (155)
68 2qgv_A Hydrogenase-1 operon pr 99.6 3.6E-16 1.2E-20 144.6 2.7 103 138-253 19-124 (140)
69 1dby_A Chloroplast thioredoxin 99.6 6.5E-16 2.2E-20 135.0 4.0 102 138-252 3-105 (107)
70 1gh6_A Large T antigen; tumor 99.6 2.3E-16 7.9E-21 141.1 0.9 66 36-102 7-74 (114)
71 2c0g_A ERP29 homolog, windbeut 99.6 1.9E-15 6.6E-20 153.6 7.8 105 136-253 16-131 (248)
72 2i1u_A Thioredoxin, TRX, MPT46 99.6 5.6E-16 1.9E-20 138.5 3.2 104 136-252 12-116 (121)
73 1fb6_A Thioredoxin M; electron 99.6 1.1E-15 3.7E-20 132.8 4.9 102 138-252 2-104 (105)
74 3qfa_C Thioredoxin; protein-pr 99.6 5.1E-16 1.7E-20 138.9 2.3 99 139-252 15-115 (116)
75 1w4v_A Thioredoxin, mitochondr 99.6 1E-15 3.5E-20 137.4 4.1 103 137-252 14-117 (119)
76 2hls_A Protein disulfide oxido 99.6 3.1E-14 1.1E-18 144.6 15.2 186 152-364 24-225 (243)
77 2ys8_A RAB-related GTP-binding 99.6 1.6E-15 5.3E-20 130.3 4.5 60 36-95 26-87 (90)
78 2dj0_A Thioredoxin-related tra 99.6 6.5E-16 2.2E-20 142.2 2.3 103 137-252 8-119 (137)
79 3idv_A Protein disulfide-isome 99.6 3.3E-15 1.1E-19 149.9 7.1 102 137-252 131-235 (241)
80 1faf_A Large T antigen; J doma 99.5 1.4E-15 4.8E-20 127.3 3.4 64 37-102 11-76 (79)
81 2pf4_E Small T antigen; PP2A, 99.5 4.9E-16 1.7E-20 148.3 0.6 65 36-101 10-76 (174)
82 2es7_A Q8ZP25_salty, putative 99.5 6.7E-15 2.3E-19 137.2 8.2 102 138-253 19-124 (142)
83 2pu9_C TRX-F, thioredoxin F-ty 99.5 4.1E-15 1.4E-19 131.2 5.9 102 136-252 5-109 (111)
84 3dxb_A Thioredoxin N-terminall 99.5 2.9E-15 9.8E-20 149.8 5.2 105 136-253 12-117 (222)
85 2l6l_A DNAJ homolog subfamily 99.5 1.8E-15 6E-20 143.3 3.5 68 35-102 8-84 (155)
86 3ul3_B Thioredoxin, thioredoxi 99.5 4.1E-15 1.4E-19 135.2 5.8 96 143-251 32-127 (128)
87 2qc7_A ERP31, ERP28, endoplasm 99.5 5.6E-15 1.9E-19 149.6 6.7 104 137-252 6-117 (240)
88 1r26_A Thioredoxin; redox-acti 99.5 2.9E-15 1E-19 136.2 3.9 100 138-252 21-121 (125)
89 1v98_A Thioredoxin; oxidoreduc 99.5 5.9E-15 2E-19 136.1 5.6 103 136-252 33-136 (140)
90 1gh2_A Thioredoxin-like protei 99.5 5.2E-15 1.8E-19 129.6 5.0 100 138-252 3-105 (107)
91 1xwb_A Thioredoxin; dimerizati 99.5 3.3E-15 1.1E-19 130.0 3.4 101 138-252 2-105 (106)
92 3d6i_A Monothiol glutaredoxin- 99.5 6.1E-15 2.1E-19 130.1 4.9 101 138-252 2-107 (112)
93 1ep7_A Thioredoxin CH1, H-type 99.5 3.4E-15 1.2E-19 131.5 2.7 102 137-252 3-109 (112)
94 2av4_A Thioredoxin-like protei 99.5 3.1E-15 1.1E-19 140.3 2.5 102 138-252 23-137 (160)
95 4f9z_D Endoplasmic reticulum r 99.5 1.9E-13 6.3E-18 137.1 15.6 201 138-363 11-223 (227)
96 3f3q_A Thioredoxin-1; His TAG, 99.5 4.3E-15 1.5E-19 131.2 3.1 99 139-252 10-108 (109)
97 2yj7_A LPBCA thioredoxin; oxid 99.2 1.6E-15 5.6E-20 131.3 0.0 102 138-252 3-105 (106)
98 3m9j_A Thioredoxin; oxidoreduc 99.5 4.9E-15 1.7E-19 128.7 2.6 96 142-252 7-104 (105)
99 1faa_A Thioredoxin F; electron 99.5 1.2E-14 4E-19 130.9 4.9 102 136-252 18-122 (124)
100 4f9z_D Endoplasmic reticulum r 99.5 1.1E-12 3.9E-17 131.4 19.9 204 262-549 14-225 (227)
101 2vlu_A Thioredoxin, thioredoxi 99.5 7.1E-15 2.4E-19 131.8 3.1 101 137-252 14-118 (122)
102 1zma_A Bacterocin transport ac 99.5 2.4E-15 8.1E-20 134.5 -0.1 101 138-250 14-117 (118)
103 2xc2_A Thioredoxinn; oxidoredu 99.5 8.3E-15 2.8E-19 130.6 3.2 100 137-252 14-116 (117)
104 2l57_A Uncharacterized protein 99.5 2.4E-14 8.4E-19 129.3 6.3 101 139-252 7-115 (126)
105 2l6c_A Thioredoxin; oxidoreduc 99.5 1.5E-14 5.1E-19 127.9 4.6 99 139-252 6-104 (110)
106 3emx_A Thioredoxin; structural 99.5 5.9E-15 2E-19 135.7 1.8 102 137-252 17-124 (135)
107 1syr_A Thioredoxin; SGPP, stru 99.5 6.9E-15 2.4E-19 130.2 2.1 100 138-252 11-110 (112)
108 3gix_A Thioredoxin-like protei 99.5 6.5E-15 2.2E-19 138.2 2.0 99 141-252 9-119 (149)
109 3lz8_A Putative chaperone DNAJ 99.5 3.5E-15 1.2E-19 157.6 0.0 67 36-102 27-95 (329)
110 1iur_A KIAA0730 protein; DNAJ 99.5 9.3E-15 3.2E-19 124.6 2.6 61 36-96 15-79 (88)
111 2vim_A Thioredoxin, TRX; thior 99.5 1.8E-14 6.1E-19 124.8 3.1 99 139-252 2-103 (104)
112 3hho_A CO-chaperone protein HS 99.5 1.9E-14 6.4E-19 138.6 3.5 64 36-99 3-76 (174)
113 2j23_A Thioredoxin; immune pro 99.4 2.5E-14 8.6E-19 128.7 3.8 102 137-252 16-119 (121)
114 2oe3_A Thioredoxin-3; electron 99.4 1.3E-14 4.6E-19 129.4 2.0 98 139-251 15-113 (114)
115 2b5e_A Protein disulfide-isome 99.4 5.4E-14 1.9E-18 157.3 6.3 104 136-252 358-465 (504)
116 1n4c_A Auxilin; four helix bun 99.4 5.5E-14 1.9E-18 135.0 5.2 61 36-96 116-182 (182)
117 2qwo_B Putative tyrosine-prote 99.4 4E-14 1.4E-18 121.2 3.8 53 37-89 33-91 (92)
118 3qcp_A QSOX from trypanosoma b 99.4 1.3E-14 4.3E-19 159.6 0.9 105 136-252 23-137 (470)
119 3evi_A Phosducin-like protein 99.4 2.5E-14 8.7E-19 129.1 2.7 99 137-252 4-112 (118)
120 2wz9_A Glutaredoxin-3; protein 99.4 3.2E-14 1.1E-18 133.7 3.0 102 137-253 13-117 (153)
121 3uo3_A J-type CO-chaperone JAC 99.4 3.7E-14 1.3E-18 137.1 3.0 68 32-99 6-80 (181)
122 1fpo_A HSC20, chaperone protei 99.4 4.5E-14 1.5E-18 135.5 3.4 63 38-100 2-74 (171)
123 3d22_A TRXH4, thioredoxin H-ty 99.4 5.3E-14 1.8E-18 129.3 3.3 105 138-257 26-135 (139)
124 3bvo_A CO-chaperone protein HS 99.4 7.2E-14 2.5E-18 137.9 4.4 63 36-98 42-114 (207)
125 1qgv_A Spliceosomal protein U5 99.4 4E-14 1.4E-18 131.7 2.0 99 142-252 10-119 (142)
126 1a8l_A Protein disulfide oxido 99.4 9.1E-14 3.1E-18 138.3 4.7 101 139-252 119-224 (226)
127 2guz_A Mitochondrial import in 99.4 7.9E-14 2.7E-18 114.2 2.6 58 36-94 13-71 (71)
128 1xfl_A Thioredoxin H1; AT3G510 99.4 6.2E-14 2.1E-18 127.0 2.1 101 137-252 17-122 (124)
129 2dbc_A PDCL2, unnamed protein 99.4 9.4E-14 3.2E-18 127.9 3.0 100 136-252 10-119 (135)
130 3ag7_A Putative uncharacterize 99.4 8.8E-14 3E-18 122.7 2.5 55 36-91 40-104 (106)
131 2vm1_A Thioredoxin, thioredoxi 99.4 1.2E-13 4E-18 122.6 2.8 102 137-253 7-113 (118)
132 3cxg_A Putative thioredoxin; m 99.4 1.4E-13 4.7E-18 126.4 2.5 102 137-252 21-127 (133)
133 1ti3_A Thioredoxin H, PTTRXH1; 99.3 8.8E-14 3E-18 122.4 0.6 101 137-252 5-110 (113)
134 2kuc_A Putative disulphide-iso 99.3 2.6E-13 8.9E-18 122.9 3.6 103 139-252 9-119 (130)
135 2f51_A Thioredoxin; electron t 99.3 1.1E-13 3.7E-18 124.2 0.9 100 138-252 5-111 (118)
136 1wmj_A Thioredoxin H-type; str 99.3 2.7E-13 9.1E-18 122.5 2.6 101 138-253 16-121 (130)
137 2trc_P Phosducin, MEKA, PP33; 99.3 1.6E-13 5.5E-18 137.0 0.6 101 137-252 100-211 (217)
138 1fo5_A Thioredoxin; disulfide 99.3 2.4E-12 8.4E-17 107.2 7.1 82 154-252 3-84 (85)
139 1nho_A Probable thioredoxin; b 99.3 3.6E-12 1.2E-16 106.2 8.0 81 155-252 3-83 (85)
140 3f8u_A Protein disulfide-isome 99.3 6.6E-10 2.3E-14 123.2 27.9 310 138-549 112-461 (481)
141 1a0r_P Phosducin, MEKA, PP33; 99.3 4.6E-13 1.6E-17 136.0 1.8 101 137-252 113-224 (245)
142 2fwh_A Thiol:disulfide interch 99.3 7.7E-13 2.6E-17 121.2 3.2 102 142-252 18-126 (134)
143 3kp8_A Vkorc1/thioredoxin doma 99.3 3.9E-13 1.3E-17 118.8 0.3 78 153-251 12-92 (106)
144 3fk8_A Disulphide isomerase; A 99.3 2.6E-12 9E-17 116.9 5.6 92 151-252 27-131 (133)
145 2ywm_A Glutaredoxin-like prote 99.3 1.9E-12 6.6E-17 129.1 4.4 98 138-252 120-218 (229)
146 2djk_A PDI, protein disulfide- 99.3 1.6E-12 5.6E-17 119.2 3.5 101 138-253 8-114 (133)
147 1wou_A Thioredoxin -related pr 99.2 9.7E-13 3.3E-17 118.8 1.3 104 137-251 6-122 (123)
148 1sji_A Calsequestrin 2, calseq 99.2 1E-10 3.6E-15 124.6 15.2 203 137-364 124-345 (350)
149 2hls_A Protein disulfide oxido 99.2 1.2E-11 4E-16 125.5 7.3 84 152-252 137-224 (243)
150 2lst_A Thioredoxin; structural 98.8 1.3E-12 4.3E-17 118.4 0.0 99 145-252 11-114 (130)
151 3us3_A Calsequestrin-1; calciu 99.2 1.2E-10 3.9E-15 125.3 14.9 208 137-367 126-350 (367)
152 3f9u_A Putative exported cytoc 99.1 2.1E-11 7.3E-16 116.1 3.7 104 139-252 29-164 (172)
153 2h8l_A Protein disulfide-isome 99.1 1.1E-09 3.6E-14 111.4 16.0 212 137-374 7-240 (252)
154 1ilo_A Conserved hypothetical 99.1 5.6E-11 1.9E-15 97.2 4.7 73 157-249 3-76 (77)
155 1sen_A Thioredoxin-like protei 99.1 1.5E-11 5.1E-16 117.0 1.0 98 146-253 39-147 (164)
156 3dml_A Putative uncharacterize 99.1 2.1E-11 7.3E-16 109.2 0.8 89 152-254 17-110 (116)
157 3iv4_A Putative oxidoreductase 99.0 2.3E-11 8E-16 107.8 0.6 100 138-248 8-110 (112)
158 2ju5_A Thioredoxin disulfide i 99.0 2E-10 6.9E-15 107.8 6.2 98 144-252 34-150 (154)
159 2b5x_A YKUV protein, TRXY; thi 99.0 4.3E-10 1.5E-14 102.9 6.6 103 140-252 16-143 (148)
160 1lu4_A Soluble secreted antige 99.0 4.5E-10 1.6E-14 101.3 5.9 89 152-252 23-134 (136)
161 1zzo_A RV1677; thioredoxin fol 99.0 5.9E-10 2E-14 100.3 6.1 90 152-252 24-133 (136)
162 3ec3_A Protein disulfide-isome 99.0 8.2E-09 2.8E-13 104.8 15.1 203 138-367 8-230 (250)
163 3kp9_A Vkorc1/thioredoxin doma 98.9 1E-10 3.4E-15 121.3 0.4 77 155-252 199-278 (291)
164 3erw_A Sporulation thiol-disul 98.9 1.2E-09 4E-14 99.6 5.8 88 152-249 33-144 (145)
165 3raz_A Thioredoxin-related pro 98.9 1.5E-09 5.1E-14 100.6 6.4 97 152-252 23-138 (151)
166 2h30_A Thioredoxin, peptide me 98.9 6.5E-10 2.2E-14 104.1 3.9 101 139-252 24-154 (164)
167 3ph9_A Anterior gradient prote 98.8 1.6E-09 5.3E-14 101.9 3.9 96 145-252 32-143 (151)
168 2f9s_A Thiol-disulfide oxidore 98.8 5.5E-09 1.9E-13 96.5 6.7 91 152-252 25-136 (151)
169 3hcz_A Possible thiol-disulfid 98.8 7.1E-09 2.4E-13 94.8 7.2 91 152-252 30-144 (148)
170 3or5_A Thiol:disulfide interch 98.8 4.1E-09 1.4E-13 98.6 5.5 98 152-253 33-150 (165)
171 3ira_A Conserved protein; meth 98.8 6.9E-10 2.4E-14 106.6 -0.0 75 144-227 30-115 (173)
172 3fkf_A Thiol-disulfide oxidore 98.8 1.1E-08 3.6E-13 93.6 7.5 88 152-252 32-144 (148)
173 2lja_A Putative thiol-disulfid 98.8 1.3E-08 4.6E-13 93.8 8.2 91 152-252 29-141 (152)
174 2l5o_A Putative thioredoxin; s 98.7 1.3E-08 4.6E-13 93.9 7.5 92 152-253 27-140 (153)
175 4evm_A Thioredoxin family prot 98.7 6.6E-09 2.3E-13 93.1 5.0 90 152-251 21-136 (138)
176 2fgx_A Putative thioredoxin; N 98.7 6.3E-09 2.2E-13 91.8 4.4 78 154-249 29-106 (107)
177 2r2j_A Thioredoxin domain-cont 98.7 1.4E-07 4.8E-12 101.6 15.3 201 138-368 120-332 (382)
178 3gl3_A Putative thiol:disulfid 98.7 2.5E-08 8.6E-13 91.9 7.5 91 152-252 27-140 (152)
179 3ia1_A THIO-disulfide isomeras 98.7 2E-08 6.8E-13 92.9 6.1 87 154-252 31-142 (154)
180 3lwa_A Secreted thiol-disulfid 98.6 3.4E-08 1.2E-12 94.5 7.0 97 152-252 58-179 (183)
181 2lrn_A Thiol:disulfide interch 98.6 4.8E-08 1.6E-12 90.4 7.2 88 152-252 28-139 (152)
182 2b1k_A Thiol:disulfide interch 98.6 1.7E-08 5.9E-13 95.0 4.2 89 151-252 49-158 (168)
183 3ha9_A Uncharacterized thiored 98.6 4.4E-08 1.5E-12 91.9 6.7 88 152-252 36-162 (165)
184 3lor_A Thiol-disulfide isomera 98.6 3.1E-08 1.1E-12 92.1 5.3 93 152-253 29-154 (160)
185 1kng_A Thiol:disulfide interch 98.6 2.8E-08 9.6E-13 91.9 4.8 89 152-252 41-150 (156)
186 3ewl_A Uncharacterized conserv 98.6 4.5E-08 1.5E-12 89.2 6.1 95 152-252 26-139 (142)
187 1z6n_A Hypothetical protein PA 98.6 1.8E-08 6.1E-13 96.2 3.2 70 152-228 53-122 (167)
188 3eur_A Uncharacterized protein 98.6 3.7E-08 1.2E-12 90.2 5.1 92 153-250 31-141 (142)
189 3eyt_A Uncharacterized protein 98.6 5.3E-08 1.8E-12 90.4 5.9 92 152-253 27-151 (158)
190 1i5g_A Tryparedoxin II; electr 98.6 3.4E-08 1.2E-12 90.5 4.6 70 152-227 27-121 (144)
191 1ttz_A Conserved hypothetical 98.5 1.5E-08 5.2E-13 86.0 1.6 73 157-252 3-75 (87)
192 1o8x_A Tryparedoxin, TRYX, TXN 98.5 4.4E-08 1.5E-12 90.1 4.7 70 152-227 27-121 (146)
193 3kcm_A Thioredoxin family prot 98.5 7.5E-08 2.6E-12 88.9 5.4 91 152-252 27-141 (154)
194 1o73_A Tryparedoxin; electron 98.5 5.2E-08 1.8E-12 89.0 4.1 67 152-224 27-116 (144)
195 3ed3_A Protein disulfide-isome 98.5 4.2E-06 1.4E-10 87.1 17.7 157 262-458 22-198 (298)
196 3hdc_A Thioredoxin family prot 98.5 1E-07 3.4E-12 89.0 4.8 91 152-252 40-150 (158)
197 2y4t_A DNAJ homolog subfamily 98.5 9.7E-08 3.3E-12 102.5 5.2 62 37-98 382-449 (450)
198 2hyx_A Protein DIPZ; thioredox 98.4 2.3E-07 7.9E-12 98.9 7.1 92 152-253 81-198 (352)
199 2guz_B Mitochondrial import in 98.4 1.7E-07 5.7E-12 74.8 4.4 51 38-89 5-58 (65)
200 2lrt_A Uncharacterized protein 98.4 2E-07 6.8E-12 86.7 5.5 88 152-249 34-143 (152)
201 3s9f_A Tryparedoxin; thioredox 98.4 1.4E-07 4.8E-12 89.2 4.2 68 152-225 47-137 (165)
202 2cvb_A Probable thiol-disulfid 98.4 3.7E-07 1.3E-11 87.6 7.2 92 152-254 32-159 (188)
203 2lus_A Thioredoxion; CR-Trp16, 97.7 5.8E-08 2E-12 88.3 0.0 69 153-227 25-120 (143)
204 2dlx_A UBX domain-containing p 98.3 6.1E-07 2.1E-11 84.3 7.0 98 144-252 29-134 (153)
205 1jfu_A Thiol:disulfide interch 98.3 5.2E-07 1.8E-11 86.3 6.5 97 152-252 59-178 (186)
206 3fw2_A Thiol-disulfide oxidore 98.3 9.2E-07 3.1E-11 81.5 8.0 88 152-252 32-146 (150)
207 2e7p_A Glutaredoxin; thioredox 98.3 3.2E-08 1.1E-12 87.5 -1.9 82 154-252 20-106 (116)
208 2ywi_A Hypothetical conserved 98.3 5E-07 1.7E-11 87.1 5.8 91 153-253 45-173 (196)
209 3kh7_A Thiol:disulfide interch 98.3 3E-07 1E-11 87.8 4.1 88 152-252 57-165 (176)
210 2k8s_A Thioredoxin; dimer, str 98.3 1.4E-07 4.9E-12 78.0 0.6 60 157-226 4-63 (80)
211 2k6v_A Putative cytochrome C o 98.2 4.1E-07 1.4E-11 85.5 3.4 97 152-252 34-171 (172)
212 3cmi_A Peroxiredoxin HYR1; thi 98.2 1.8E-06 6.1E-11 81.6 7.4 96 152-252 31-166 (171)
213 3bj5_A Protein disulfide-isome 98.2 9.9E-06 3.4E-10 75.4 11.8 133 359-568 7-145 (147)
214 2ggt_A SCO1 protein homolog, m 98.2 3.4E-06 1.2E-10 78.5 8.6 91 152-252 22-159 (164)
215 1hyu_A AHPF, alkyl hydroperoxi 98.2 6E-07 2.1E-11 100.7 3.6 94 140-251 103-197 (521)
216 2vup_A Glutathione peroxidase- 98.2 3.1E-06 1E-10 81.7 8.1 97 152-252 47-183 (190)
217 4fo5_A Thioredoxin-like protei 98.2 8.4E-07 2.9E-11 81.1 3.9 86 152-249 31-140 (143)
218 2ls5_A Uncharacterized protein 97.4 2.8E-07 9.5E-12 85.8 0.0 95 152-251 32-145 (159)
219 3u5r_E Uncharacterized protein 98.1 2.8E-06 9.6E-11 84.1 7.3 90 153-253 58-186 (218)
220 2rli_A SCO2 protein homolog, m 98.1 6.4E-06 2.2E-10 77.2 8.6 91 152-252 25-162 (171)
221 2p5q_A Glutathione peroxidase 98.1 4E-06 1.4E-10 78.4 7.2 97 152-252 31-166 (170)
222 2p31_A CL683, glutathione pero 98.1 4.3E-06 1.5E-10 80.0 7.2 97 152-252 48-179 (181)
223 1ego_A Glutaredoxin; electron 98.1 2.8E-06 9.6E-11 70.4 4.8 79 157-252 3-82 (85)
224 2l4c_A Endoplasmic reticulum r 98.1 1.4E-05 5E-10 72.1 9.8 100 256-365 18-124 (124)
225 1wjk_A C330018D20RIK protein; 98.0 1.3E-06 4.4E-11 75.8 2.0 81 152-252 14-94 (100)
226 3dwv_A Glutathione peroxidase- 98.0 9.6E-06 3.3E-10 78.0 8.4 97 152-252 45-181 (187)
227 1eej_A Thiol:disulfide interch 98.0 2.7E-06 9.3E-11 84.2 4.3 84 152-252 85-209 (216)
228 2v1m_A Glutathione peroxidase; 98.0 8E-06 2.7E-10 76.3 7.1 97 152-252 30-165 (169)
229 1we0_A Alkyl hydroperoxide red 98.0 1.3E-05 4.3E-10 76.9 7.7 91 152-252 30-155 (187)
230 2bmx_A Alkyl hydroperoxidase C 97.9 1.1E-05 3.7E-10 78.1 5.6 98 152-252 44-168 (195)
231 3gyk_A 27KDA outer membrane pr 97.9 1.1E-05 3.7E-10 76.4 5.5 33 152-184 21-53 (175)
232 1zof_A Alkyl hydroperoxide-red 97.9 1.7E-05 5.7E-10 76.9 6.9 91 152-252 32-159 (198)
233 2obi_A PHGPX, GPX-4, phospholi 97.8 1.3E-05 4.4E-10 76.6 5.5 96 152-251 46-181 (183)
234 1xvw_A Hypothetical protein RV 97.8 1.4E-05 4.8E-10 74.2 4.9 87 154-250 37-156 (160)
235 3drn_A Peroxiredoxin, bacterio 97.8 1.7E-05 5.9E-10 74.0 5.4 79 153-240 28-131 (161)
236 2f8a_A Glutathione peroxidase 97.8 3.7E-05 1.3E-09 75.6 7.8 43 152-194 46-89 (208)
237 2gs3_A PHGPX, GPX-4, phospholi 97.8 2.7E-05 9.2E-10 74.6 6.5 56 152-207 48-112 (185)
238 3kij_A Probable glutathione pe 97.8 4.1E-05 1.4E-09 72.9 7.6 97 152-252 37-168 (180)
239 1t3b_A Thiol:disulfide interch 97.8 1.3E-05 4.4E-10 79.0 4.0 83 152-251 85-208 (211)
240 1qmv_A Human thioredoxin perox 97.8 1.6E-05 5.6E-10 77.0 4.6 92 152-252 33-161 (197)
241 2l4c_A Endoplasmic reticulum r 97.7 1.5E-05 5.2E-10 72.0 3.9 94 139-252 24-122 (124)
242 3zzx_A Thioredoxin; oxidoreduc 97.7 4.8E-05 1.7E-09 66.3 6.9 97 262-364 5-105 (105)
243 1un2_A DSBA, thiol-disulfide i 97.7 2.9E-06 1E-10 83.0 -1.4 53 144-196 102-159 (197)
244 1xzo_A BSSCO, hypothetical pro 97.7 0.00015 5E-09 68.0 10.0 97 152-252 32-170 (174)
245 3h79_A Thioredoxin-like protei 97.7 0.00011 3.8E-09 65.5 8.6 97 262-363 20-126 (127)
246 2qc7_A ERP31, ERP28, endoplasm 97.7 0.00018 6.1E-09 72.5 10.6 98 262-364 10-118 (240)
247 2qsi_A Putative hydrogenase ex 97.6 0.00017 5.7E-09 66.2 8.8 97 262-364 20-122 (137)
248 2h01_A 2-Cys peroxiredoxin; th 97.6 4.7E-05 1.6E-09 73.3 5.5 91 152-252 30-157 (192)
249 3ga4_A Dolichyl-diphosphooligo 97.6 0.00018 6.1E-09 69.0 9.4 112 262-377 23-165 (178)
250 1h75_A Glutaredoxin-like prote 97.6 1.1E-05 3.9E-10 66.1 0.8 71 157-249 3-73 (81)
251 2dml_A Protein disulfide-isome 97.6 0.00048 1.7E-08 61.2 11.1 84 278-363 35-122 (130)
252 1zye_A Thioredoxin-dependent p 97.6 0.00014 4.7E-09 72.0 8.0 91 152-252 55-183 (220)
253 2qgv_A Hydrogenase-1 operon pr 97.5 0.00011 3.7E-09 67.7 6.1 96 262-364 22-124 (140)
254 1uul_A Tryparedoxin peroxidase 97.5 5.8E-05 2E-09 73.4 4.6 98 152-252 35-163 (202)
255 1r7h_A NRDH-redoxin; thioredox 97.5 6.3E-05 2.2E-09 60.3 4.1 71 157-249 3-73 (75)
256 2c0g_A ERP29 homolog, windbeut 97.5 0.00056 1.9E-08 69.1 11.5 97 262-364 21-131 (248)
257 2es7_A Q8ZP25_salty, putative 97.5 0.00022 7.5E-09 65.7 7.8 99 262-368 22-128 (142)
258 2b7k_A SCO1 protein; metalloch 97.5 0.00023 8E-09 69.0 8.2 93 152-254 40-179 (200)
259 2djk_A PDI, protein disulfide- 97.4 0.00053 1.8E-08 62.0 9.6 107 256-368 5-118 (133)
260 3hd5_A Thiol:disulfide interch 97.4 0.00011 3.7E-09 70.9 4.9 43 151-193 23-65 (195)
261 2voc_A Thioredoxin; electron t 97.4 0.00059 2E-08 59.2 9.0 86 278-366 17-106 (112)
262 3h93_A Thiol:disulfide interch 97.3 9.7E-05 3.3E-09 71.0 3.7 35 152-186 24-58 (192)
263 3ztl_A Thioredoxin peroxidase; 97.3 0.00012 4.2E-09 72.4 4.4 97 152-251 68-195 (222)
264 1nm3_A Protein HI0572; hybrid, 97.3 0.0015 5E-08 65.2 12.3 56 152-207 32-91 (241)
265 2dj1_A Protein disulfide-isome 97.3 0.00086 2.9E-08 60.4 9.1 98 262-367 22-126 (140)
266 3q6o_A Sulfhydryl oxidase 1; p 97.3 0.0038 1.3E-07 62.2 14.5 84 279-363 31-125 (244)
267 3hxs_A Thioredoxin, TRXP; elec 97.2 0.00096 3.3E-08 60.2 9.0 83 278-363 51-137 (141)
268 1kte_A Thioltransferase; redox 97.2 5.4E-05 1.8E-09 65.3 0.3 59 157-226 14-76 (105)
269 2i81_A 2-Cys peroxiredoxin; st 97.2 0.00032 1.1E-08 69.0 5.9 92 152-252 51-178 (213)
270 1mek_A Protein disulfide isome 97.2 0.0025 8.5E-08 55.1 11.0 97 262-364 12-116 (120)
271 3tco_A Thioredoxin (TRXA-1); d 97.2 0.00076 2.6E-08 57.5 7.5 95 262-363 9-107 (109)
272 1v58_A Thiol:disulfide interch 97.2 0.0002 6.7E-09 72.0 4.2 89 152-252 96-231 (241)
273 3gkn_A Bacterioferritin comigr 97.2 0.00022 7.5E-09 66.3 4.3 96 153-251 35-159 (163)
274 3die_A Thioredoxin, TRX; elect 97.2 0.00087 3E-08 56.9 7.7 83 277-362 18-104 (106)
275 1x5e_A Thioredoxin domain cont 97.2 0.00098 3.3E-08 59.0 8.0 100 262-370 12-115 (126)
276 2jsy_A Probable thiol peroxida 97.1 0.0003 1E-08 65.6 4.4 63 152-221 43-106 (167)
277 3qou_A Protein YBBN; thioredox 97.1 0.0025 8.4E-08 65.0 11.6 99 261-364 11-113 (287)
278 2znm_A Thiol:disulfide interch 97.1 0.0012 4E-08 63.3 8.7 33 152-184 21-53 (195)
279 1oaz_A Thioredoxin 1; immune s 97.1 0.0011 3.7E-08 59.1 7.7 71 289-362 50-120 (123)
280 3gnj_A Thioredoxin domain prot 97.1 0.00076 2.6E-08 57.9 6.4 96 262-363 9-108 (111)
281 3t58_A Sulfhydryl oxidase 1; o 97.1 0.0076 2.6E-07 67.3 16.2 86 278-363 30-125 (519)
282 2c0d_A Thioredoxin peroxidase 97.1 0.00076 2.6E-08 66.8 7.1 98 152-252 55-182 (221)
283 1thx_A Thioredoxin, thioredoxi 97.0 0.0019 6.6E-08 55.5 8.6 84 277-363 24-111 (115)
284 3qfa_C Thioredoxin; protein-pr 97.0 0.0011 3.9E-08 58.0 7.2 90 268-363 22-115 (116)
285 2i4a_A Thioredoxin; acidophIle 97.0 0.0011 3.7E-08 56.4 6.8 84 277-363 19-106 (107)
286 1w4v_A Thioredoxin, mitochondr 97.0 0.00098 3.4E-08 58.6 6.6 83 278-363 31-117 (119)
287 2l5l_A Thioredoxin; structural 97.0 0.0021 7.3E-08 57.8 9.0 87 278-367 38-128 (136)
288 1x5d_A Protein disulfide-isome 97.0 0.0014 4.7E-08 58.2 7.6 83 278-363 25-115 (133)
289 3apq_A DNAJ homolog subfamily 97.0 0.0011 3.8E-08 64.6 7.3 78 292-372 132-209 (210)
290 3ul3_B Thioredoxin, thioredoxi 97.0 0.00084 2.9E-08 59.8 5.9 84 277-363 41-128 (128)
291 2trx_A Thioredoxin; electron t 97.0 0.0013 4.4E-08 56.1 6.9 84 277-363 19-106 (108)
292 2i3y_A Epididymal secretory gl 97.0 0.003 1E-07 62.2 10.3 42 152-194 55-97 (215)
293 1xvq_A Thiol peroxidase; thior 97.0 0.0008 2.7E-08 63.6 5.9 41 152-194 43-84 (175)
294 2a4v_A Peroxiredoxin DOT5; yea 97.0 0.00039 1.3E-08 64.4 3.6 93 154-251 36-151 (159)
295 3uvt_A Thioredoxin domain-cont 97.0 0.0016 5.4E-08 55.7 7.2 94 262-363 10-110 (111)
296 3m9j_A Thioredoxin; oxidoreduc 96.9 0.003 1E-07 53.4 8.5 90 268-363 11-104 (105)
297 3aps_A DNAJ homolog subfamily 96.9 0.00076 2.6E-08 59.2 4.8 83 278-363 21-111 (122)
298 2klx_A Glutaredoxin; thioredox 96.9 0.00056 1.9E-08 57.1 3.6 54 156-222 7-61 (89)
299 3p2a_A Thioredoxin 2, putative 96.9 0.0017 5.7E-08 59.3 7.1 95 262-363 43-141 (148)
300 2yzu_A Thioredoxin; redox prot 96.9 0.0018 6.2E-08 55.0 6.9 95 262-363 6-104 (109)
301 3hz4_A Thioredoxin; NYSGXRC, P 96.9 0.001 3.4E-08 60.4 5.5 83 278-363 24-110 (140)
302 2o8v_B Thioredoxin 1; disulfid 96.9 0.0015 5.2E-08 58.4 6.6 84 277-363 39-126 (128)
303 4euy_A Uncharacterized protein 96.9 0.0011 3.8E-08 56.7 5.3 83 277-363 17-103 (105)
304 2pn8_A Peroxiredoxin-4; thiore 96.8 0.0012 3.9E-08 64.9 6.0 98 152-252 47-175 (211)
305 1xwb_A Thioredoxin; dimerizati 96.8 0.0037 1.3E-07 52.9 8.4 91 268-363 11-105 (106)
306 2e0q_A Thioredoxin; electron t 96.8 0.0024 8.3E-08 53.5 7.1 89 268-363 9-101 (104)
307 2i1u_A Thioredoxin, TRX, MPT46 96.8 0.0017 5.8E-08 56.6 6.3 82 278-362 30-115 (121)
308 1dby_A Chloroplast thioredoxin 96.8 0.0027 9.1E-08 54.0 7.3 82 278-362 19-104 (107)
309 4g2e_A Peroxiredoxin; redox pr 96.8 0.0013 4.5E-08 61.1 5.7 56 152-207 29-86 (157)
310 2hze_A Glutaredoxin-1; thiored 96.8 0.00028 9.5E-09 62.2 0.7 59 155-222 19-81 (114)
311 1nsw_A Thioredoxin, TRX; therm 96.8 0.0014 4.9E-08 55.6 5.2 82 278-362 17-102 (105)
312 2ppt_A Thioredoxin-2; thiredox 96.8 0.0018 6.3E-08 60.1 6.4 83 278-363 64-150 (155)
313 1t00_A Thioredoxin, TRX; redox 96.8 0.002 6.8E-08 55.4 6.2 83 278-363 23-109 (112)
314 2l57_A Uncharacterized protein 96.8 0.0025 8.7E-08 56.2 7.0 90 277-366 25-118 (126)
315 2cq9_A GLRX2 protein, glutared 96.7 0.00063 2.2E-08 61.5 2.8 62 146-221 20-85 (130)
316 2j23_A Thioredoxin; immune pro 96.7 0.0028 9.6E-08 55.8 7.0 95 262-363 20-119 (121)
317 1n8j_A AHPC, alkyl hydroperoxi 96.7 0.0019 6.4E-08 61.8 6.3 98 152-252 29-154 (186)
318 2r37_A Glutathione peroxidase 96.7 0.0061 2.1E-07 59.6 10.0 42 152-194 37-79 (207)
319 1gh2_A Thioredoxin-like protei 96.7 0.004 1.4E-07 53.1 7.6 96 262-363 6-105 (107)
320 3f3q_A Thioredoxin-1; His TAG, 96.7 0.0029 9.8E-08 54.7 6.7 82 277-363 23-108 (109)
321 1ep7_A Thioredoxin CH1, H-type 96.7 0.0025 8.7E-08 54.7 6.1 92 268-363 13-109 (112)
322 2av4_A Thioredoxin-like protei 96.6 0.002 7E-08 60.2 5.7 93 268-363 32-137 (160)
323 3d6i_A Monothiol glutaredoxin- 96.6 0.0077 2.6E-07 51.7 9.1 98 262-363 5-107 (112)
324 2dj0_A Thioredoxin-related tra 96.6 0.002 6.8E-08 58.1 5.3 95 262-361 12-117 (137)
325 1fb6_A Thioredoxin M; electron 96.6 0.0023 8E-08 54.0 5.5 82 278-362 18-103 (105)
326 2oe3_A Thioredoxin-3; electron 96.6 0.0035 1.2E-07 54.7 6.7 93 262-362 17-113 (114)
327 2vim_A Thioredoxin, TRX; thior 96.6 0.0099 3.4E-07 49.9 9.3 90 268-363 10-103 (104)
328 2vlu_A Thioredoxin, thioredoxi 96.6 0.0029 1E-07 55.3 6.0 95 263-363 19-118 (122)
329 2l6c_A Thioredoxin; oxidoreduc 96.6 0.0047 1.6E-07 53.4 7.1 82 278-363 19-104 (110)
330 2dj3_A Protein disulfide-isome 96.5 0.0031 1.1E-07 56.1 5.9 85 278-364 25-117 (133)
331 3ixr_A Bacterioferritin comigr 96.5 0.0017 5.9E-08 61.6 4.3 54 153-206 51-106 (179)
332 2ht9_A Glutaredoxin-2; thiored 96.5 0.00098 3.4E-08 61.7 2.4 53 157-221 51-107 (146)
333 1syr_A Thioredoxin; SGPP, stru 96.5 0.0062 2.1E-07 52.5 7.4 92 262-362 14-109 (112)
334 1r26_A Thioredoxin; redox-acti 96.5 0.0051 1.7E-07 54.8 6.9 94 262-363 24-121 (125)
335 1z6m_A Conserved hypothetical 96.5 0.0027 9.2E-08 59.8 5.3 36 152-187 26-63 (175)
336 1q98_A Thiol peroxidase, TPX; 96.4 0.0023 7.8E-08 59.8 4.6 55 152-207 42-97 (165)
337 2djj_A PDI, protein disulfide- 96.4 0.0049 1.7E-07 53.7 6.5 81 278-363 25-115 (121)
338 3qpm_A Peroxiredoxin; oxidored 96.4 0.0046 1.6E-07 61.9 6.7 98 152-252 76-204 (240)
339 1tp9_A Peroxiredoxin, PRX D (t 96.3 0.0031 1E-07 58.8 5.0 56 152-207 34-93 (162)
340 1fo5_A Thioredoxin; disulfide 96.3 0.011 3.8E-07 47.7 7.8 77 280-363 4-84 (85)
341 1v98_A Thioredoxin; oxidoreduc 96.3 0.0078 2.7E-07 54.2 7.5 68 293-363 69-136 (140)
342 3dxb_A Thioredoxin N-terminall 96.3 0.0054 1.9E-07 60.3 6.9 84 278-364 30-117 (222)
343 3tjj_A Peroxiredoxin-4; thiore 96.3 0.0062 2.1E-07 61.6 7.5 97 152-251 90-217 (254)
344 3c1r_A Glutaredoxin-1; oxidize 96.3 0.0008 2.7E-08 59.8 0.6 59 157-226 27-90 (118)
345 3me7_A Putative uncharacterize 96.3 0.0088 3E-07 56.1 7.9 97 153-252 28-160 (170)
346 2xc2_A Thioredoxinn; oxidoredu 96.3 0.0064 2.2E-07 52.8 6.5 95 262-363 18-116 (117)
347 1fov_A Glutaredoxin 3, GRX3; a 96.3 0.0018 6.3E-08 52.6 2.7 71 157-251 3-74 (82)
348 1nho_A Probable thioredoxin; b 96.2 0.013 4.3E-07 47.4 7.6 68 289-363 16-83 (85)
349 2rem_A Disulfide oxidoreductas 96.2 0.004 1.4E-07 59.4 4.8 35 152-186 24-58 (193)
350 1xfl_A Thioredoxin H1; AT3G510 96.1 0.0085 2.9E-07 53.1 6.6 91 268-363 27-122 (124)
351 3bj5_A Protein disulfide-isome 96.1 0.0099 3.4E-07 54.9 7.2 108 137-254 15-127 (147)
352 3ic4_A Glutaredoxin (GRX-1); s 96.1 0.0025 8.4E-08 53.3 2.6 72 157-250 14-91 (92)
353 2pwj_A Mitochondrial peroxired 96.1 0.0028 9.7E-08 59.8 3.3 61 153-219 44-108 (171)
354 3hz8_A Thiol:disulfide interch 96.1 0.0013 4.6E-08 63.4 0.9 43 152-194 23-65 (193)
355 2wz9_A Glutaredoxin-3; protein 96.1 0.012 4.2E-07 54.0 7.4 97 262-364 17-117 (153)
356 2yan_A Glutaredoxin-3; oxidore 96.0 0.0031 1.1E-07 54.5 3.0 65 146-226 10-80 (105)
357 2yzh_A Probable thiol peroxida 96.0 0.0023 8E-08 59.9 2.1 62 152-220 46-108 (171)
358 1ti3_A Thioredoxin H, PTTRXH1; 96.0 0.009 3.1E-07 51.1 5.7 91 268-363 15-110 (113)
359 2khp_A Glutaredoxin; thioredox 95.9 0.0024 8.1E-08 53.4 1.8 57 156-226 7-64 (92)
360 2pu9_C TRX-F, thioredoxin F-ty 95.9 0.015 5.3E-07 49.7 7.1 96 262-363 10-109 (111)
361 2kuc_A Putative disulphide-iso 95.9 0.0091 3.1E-07 52.7 5.6 64 303-366 59-122 (130)
362 3zrd_A Thiol peroxidase; oxido 95.9 0.0046 1.6E-07 60.0 3.8 61 152-219 77-138 (200)
363 3gv1_A Disulfide interchange p 95.9 0.0039 1.3E-07 57.7 3.1 87 151-252 12-137 (147)
364 3a2v_A Probable peroxiredoxin; 95.8 0.0045 1.5E-07 62.5 3.7 89 155-252 36-160 (249)
365 4gqc_A Thiol peroxidase, perox 95.8 0.0021 7E-08 60.4 1.1 57 151-207 31-89 (164)
366 3emx_A Thioredoxin; structural 95.8 0.0084 2.9E-07 53.9 5.1 69 293-364 50-125 (135)
367 3gix_A Thioredoxin-like protei 95.8 0.0098 3.3E-07 54.7 5.6 93 268-363 14-119 (149)
368 1psq_A Probable thiol peroxida 95.8 0.0022 7.5E-08 59.7 1.1 55 152-207 41-96 (163)
369 3l9v_A Putative thiol-disulfid 95.8 0.0013 4.5E-08 63.3 -0.6 42 153-194 14-58 (189)
370 2wfc_A Peroxiredoxin 5, PRDX5; 95.8 0.0053 1.8E-07 57.8 3.6 56 152-207 30-89 (167)
371 2fwh_A Thiol:disulfide interch 95.7 0.05 1.7E-06 48.5 9.9 65 297-362 57-125 (134)
372 3iv4_A Putative oxidoreductase 95.7 0.014 4.8E-07 51.4 5.8 94 262-360 11-111 (112)
373 3nzn_A Glutaredoxin; structura 95.7 0.0089 3.1E-07 51.3 4.5 76 153-249 20-101 (103)
374 1zma_A Bacterocin transport ac 95.7 0.0061 2.1E-07 53.1 3.3 80 279-361 30-117 (118)
375 1faa_A Thioredoxin F; electron 95.6 0.025 8.5E-07 49.4 7.3 96 262-363 23-122 (124)
376 3uma_A Hypothetical peroxiredo 95.6 0.0057 2E-07 58.7 3.2 55 153-207 56-114 (184)
377 2dbc_A PDCL2, unnamed protein 95.6 0.024 8.1E-07 51.0 7.1 95 262-364 15-120 (135)
378 3cxg_A Putative thioredoxin; m 95.5 0.014 4.7E-07 52.4 5.3 96 262-363 25-127 (133)
379 2vm1_A Thioredoxin, thioredoxi 95.5 0.015 5E-07 50.1 5.3 91 268-363 17-112 (118)
380 2yj7_A LPBCA thioredoxin; oxid 94.5 0.0023 8E-08 53.8 0.0 82 278-362 19-104 (106)
381 3feu_A Putative lipoprotein; a 95.5 0.0038 1.3E-07 59.8 1.4 40 153-194 22-61 (185)
382 3mng_A Peroxiredoxin-5, mitoch 95.5 0.009 3.1E-07 56.7 4.0 55 153-207 43-101 (173)
383 1wmj_A Thioredoxin H-type; str 95.4 0.014 4.9E-07 51.2 5.0 92 268-364 25-121 (130)
384 2trc_P Phosducin, MEKA, PP33; 95.4 0.015 5E-07 57.3 5.5 92 268-364 110-212 (217)
385 1wou_A Thioredoxin -related pr 95.3 0.021 7.3E-07 50.3 5.8 92 268-362 15-122 (123)
386 3fk8_A Disulphide isomerase; A 95.3 0.016 5.3E-07 51.5 4.9 85 278-362 29-130 (133)
387 1qgv_A Spliceosomal protein U5 95.3 0.017 5.9E-07 52.6 5.2 83 278-362 23-118 (142)
388 3d22_A TRXH4, thioredoxin H-ty 95.2 0.015 5.3E-07 52.0 4.5 82 278-364 46-131 (139)
389 3p7x_A Probable thiol peroxida 95.2 0.0054 1.8E-07 57.2 1.4 61 152-220 45-106 (166)
390 3rhb_A ATGRXC5, glutaredoxin-C 95.2 0.0072 2.5E-07 52.7 2.2 56 157-226 21-81 (113)
391 3evi_A Phosducin-like protein 95.2 0.025 8.7E-07 50.1 5.7 79 279-364 24-113 (118)
392 2ec4_A FAS-associated factor 1 95.1 0.043 1.5E-06 52.3 7.4 96 151-252 53-166 (178)
393 3qmx_A Glutaredoxin A, glutare 94.9 0.014 4.8E-07 50.0 3.3 61 152-226 13-75 (99)
394 1wik_A Thioredoxin-like protei 94.9 0.012 4.1E-07 51.2 2.6 67 144-226 6-78 (109)
395 2lst_A Thioredoxin; structural 93.8 0.005 1.7E-07 54.6 0.0 85 278-362 19-113 (130)
396 2lqo_A Putative glutaredoxin R 94.7 0.042 1.4E-06 46.5 5.5 78 156-252 5-82 (92)
397 2f51_A Thioredoxin; electron t 94.6 0.025 8.4E-07 49.5 4.1 85 278-366 23-114 (118)
398 1a0r_P Phosducin, MEKA, PP33; 94.5 0.056 1.9E-06 54.2 6.8 93 268-365 123-226 (245)
399 2v2g_A Peroxiredoxin 6; oxidor 94.4 0.039 1.3E-06 54.9 5.4 96 154-252 30-163 (233)
400 1zzo_A RV1677; thioredoxin fol 94.3 0.075 2.6E-06 46.4 6.5 67 294-362 45-132 (136)
401 3erw_A Sporulation thiol-disul 94.2 0.053 1.8E-06 48.0 5.5 42 319-360 103-144 (145)
402 1lu4_A Soluble secreted antige 94.1 0.09 3.1E-06 46.0 6.7 67 294-362 44-133 (136)
403 2b5x_A YKUV protein, TRXY; thi 94.0 0.088 3E-06 46.8 6.5 69 294-362 49-142 (148)
404 3msz_A Glutaredoxin 1; alpha-b 93.8 0.021 7.1E-07 46.8 1.7 81 155-252 4-85 (89)
405 1hyu_A AHPF, alkyl hydroperoxi 93.7 0.34 1.2E-05 53.8 12.0 174 153-362 18-197 (521)
406 3qcp_A QSOX from trypanosoma b 93.4 0.024 8.2E-07 62.2 1.8 89 262-354 28-129 (470)
407 2lja_A Putative thiol-disulfid 93.4 0.27 9.1E-06 44.0 8.7 85 278-362 30-140 (152)
408 1prx_A HORF6; peroxiredoxin, h 93.3 0.094 3.2E-06 51.6 5.8 41 155-195 34-75 (224)
409 3dml_A Putative uncharacterize 93.2 0.1 3.5E-06 46.1 5.3 63 299-362 40-107 (116)
410 1ilo_A Conserved hypothetical 93.1 0.16 5.4E-06 40.0 5.9 70 281-360 3-76 (77)
411 2f9s_A Thiol-disulfide oxidore 92.9 0.17 5.7E-06 45.5 6.5 86 278-363 26-136 (151)
412 3ctg_A Glutaredoxin-2; reduced 92.8 0.016 5.4E-07 52.2 -0.6 69 145-226 29-102 (129)
413 2l5o_A Putative thioredoxin; s 92.5 0.34 1.2E-05 43.4 8.1 44 319-362 95-138 (153)
414 3l9s_A Thiol:disulfide interch 92.0 0.033 1.1E-06 53.5 0.4 42 153-194 21-65 (191)
415 3raz_A Thioredoxin-related pro 91.8 0.34 1.2E-05 43.6 7.1 43 320-362 93-137 (151)
416 4evm_A Thioredoxin family prot 91.8 0.34 1.1E-05 41.9 6.8 43 320-362 94-136 (138)
417 3h8q_A Thioredoxin reductase 3 91.2 0.081 2.8E-06 46.2 2.1 62 147-222 11-76 (114)
418 1xcc_A 1-Cys peroxiredoxin; un 91.1 0.15 5.1E-06 50.1 4.2 41 155-195 34-75 (220)
419 3fkf_A Thiol-disulfide oxidore 91.1 0.62 2.1E-05 41.1 8.1 82 278-362 33-143 (148)
420 2ju5_A Thioredoxin disulfide i 91.0 0.42 1.5E-05 43.6 6.9 42 320-362 106-149 (154)
421 3or5_A Thiol:disulfide interch 90.3 0.5 1.7E-05 42.7 6.8 37 327-363 113-149 (165)
422 3ia1_A THIO-disulfide isomeras 90.1 0.34 1.2E-05 43.5 5.3 46 319-364 98-143 (154)
423 3hcz_A Possible thiol-disulfid 89.8 1.2 4E-05 39.3 8.7 71 278-350 31-131 (148)
424 3gl3_A Putative thiol:disulfid 89.5 0.73 2.5E-05 41.0 7.1 44 321-364 96-141 (152)
425 3keb_A Probable thiol peroxida 88.7 0.27 9.2E-06 48.6 3.8 52 152-207 47-104 (224)
426 3lor_A Thiol-disulfide isomera 88.6 0.83 2.9E-05 41.1 6.9 41 322-362 112-152 (160)
427 4dvc_A Thiol:disulfide interch 88.5 0.14 4.9E-06 47.6 1.5 39 152-190 20-58 (184)
428 3eyt_A Uncharacterized protein 88.2 0.94 3.2E-05 40.7 6.9 42 321-362 108-149 (158)
429 2h30_A Thioredoxin, peptide me 87.2 0.86 3E-05 41.2 6.0 44 320-363 111-154 (164)
430 2dlx_A UBX domain-containing p 86.7 3 0.0001 38.3 9.4 56 306-362 77-133 (153)
431 3hdc_A Thioredoxin family prot 86.0 1.3 4.4E-05 40.0 6.5 47 320-366 105-153 (158)
432 2lrn_A Thiol:disulfide interch 86.0 1.6 5.4E-05 39.0 7.1 41 319-362 98-138 (152)
433 3l4n_A Monothiol glutaredoxin- 85.2 0.22 7.5E-06 44.6 0.7 65 146-222 7-76 (127)
434 3c7m_A Thiol:disulfide interch 84.9 0.36 1.2E-05 45.5 2.1 41 152-192 16-57 (195)
435 3lwa_A Secreted thiol-disulfid 84.8 1.8 6.2E-05 40.0 7.1 36 327-362 143-178 (183)
436 3f9u_A Putative exported cytoc 84.6 2 7E-05 39.3 7.3 40 323-362 123-163 (172)
437 4f82_A Thioredoxin reductase; 84.4 0.55 1.9E-05 44.5 3.2 55 153-207 48-105 (176)
438 3kcm_A Thioredoxin family prot 84.3 1.5 5E-05 39.1 6.0 42 321-362 97-140 (154)
439 2fgx_A Putative thioredoxin; N 83.8 1.8 6.3E-05 37.4 6.0 60 293-360 47-106 (107)
440 4hde_A SCO1/SENC family lipopr 83.7 0.71 2.4E-05 42.9 3.6 33 152-184 31-64 (170)
441 3ha9_A Uncharacterized thiored 83.5 2.1 7.3E-05 38.7 6.8 40 321-362 121-161 (165)
442 2axo_A Hypothetical protein AT 82.8 1.7 5.8E-05 44.0 6.2 83 155-252 44-141 (270)
443 3fw2_A Thiol-disulfide oxidore 81.9 3.3 0.00011 36.7 7.4 39 321-362 107-145 (150)
444 1nm3_A Protein HI0572; hybrid, 81.7 0.71 2.4E-05 45.4 2.9 57 154-222 169-225 (241)
445 3kp8_A Vkorc1/thioredoxin doma 80.8 3.9 0.00013 34.8 7.0 37 319-361 55-91 (106)
446 1sen_A Thioredoxin-like protei 80.7 0.65 2.2E-05 42.9 2.1 84 278-362 46-145 (164)
447 2b1k_A Thiol:disulfide interch 80.6 1.5 5.2E-05 39.8 4.6 43 320-362 115-157 (168)
448 1kng_A Thiol:disulfide interch 80.6 6.4 0.00022 34.8 8.8 43 320-362 107-149 (156)
449 2wci_A Glutaredoxin-4; redox-a 80.3 0.58 2E-05 42.3 1.6 58 155-226 36-98 (135)
450 2ct6_A SH3 domain-binding glut 79.8 1.4 4.6E-05 38.1 3.7 59 156-221 9-77 (111)
451 3s9f_A Tryparedoxin; thioredox 78.5 2 7E-05 39.3 4.8 63 278-340 48-138 (165)
452 1o8x_A Tryparedoxin, TRYX, TXN 77.5 2.4 8.1E-05 37.5 4.8 64 278-341 28-120 (146)
453 1aba_A Glutaredoxin; electron 77.2 0.88 3E-05 37.2 1.6 54 157-222 2-70 (87)
454 2cvb_A Probable thiol-disulfid 77.0 4.3 0.00015 37.6 6.7 42 320-363 106-157 (188)
455 1o73_A Tryparedoxin; electron 77.0 2.3 7.7E-05 37.4 4.5 64 278-341 28-120 (144)
456 1i5g_A Tryparedoxin II; electr 75.7 2.6 8.9E-05 37.1 4.5 64 278-341 28-120 (144)
457 3sbc_A Peroxiredoxin TSA1; alp 75.3 1.7 5.9E-05 42.5 3.4 53 153-205 52-106 (216)
458 2ywi_A Hypothetical conserved 75.2 3.5 0.00012 38.4 5.5 44 320-363 120-172 (196)
459 3kh7_A Thiol:disulfide interch 74.9 8.9 0.00031 35.2 8.2 43 320-362 122-164 (176)
460 2hyx_A Protein DIPZ; thioredox 74.3 3.2 0.00011 43.6 5.4 43 320-362 154-196 (352)
461 1xiy_A Peroxiredoxin, pfaop; a 73.7 2.6 8.9E-05 39.9 4.1 55 153-207 43-102 (182)
462 2pzi_A Probable serine/threoni 73.4 2.8 9.6E-05 47.8 5.1 48 34-86 626-675 (681)
463 3zyw_A Glutaredoxin-3; metal b 73.0 1.5 5.3E-05 37.9 2.2 54 157-222 18-77 (111)
464 2xhf_A Peroxiredoxin 5; oxidor 72.7 5.5 0.00019 37.3 6.1 55 153-207 42-99 (171)
465 2ggt_A SCO1 protein homolog, m 72.1 5.5 0.00019 35.6 5.9 42 321-362 102-158 (164)
466 1ttz_A Conserved hypothetical 72.0 18 0.0006 29.6 8.4 46 309-362 29-74 (87)
467 1t1v_A SH3BGRL3, SH3 domain-bi 71.3 3.3 0.00011 34.2 3.8 55 157-222 4-66 (93)
468 3tue_A Tryparedoxin peroxidase 70.3 3.6 0.00012 40.3 4.3 54 152-205 55-110 (219)
469 3gha_A Disulfide bond formatio 70.0 1.5 5.2E-05 42.1 1.6 42 152-193 28-72 (202)
470 3ph9_A Anterior gradient prote 69.2 12 0.00041 34.1 7.5 53 308-361 79-138 (151)
471 2rli_A SCO2 protein homolog, m 68.6 9.6 0.00033 34.3 6.8 42 321-362 105-161 (171)
472 1jfu_A Thiol:disulfide interch 68.2 9.6 0.00033 35.0 6.8 69 294-362 80-177 (186)
473 1z6n_A Hypothetical protein PA 67.4 3.1 0.00011 38.7 3.1 80 278-362 54-140 (167)
474 3ipz_A Monothiol glutaredoxin- 65.5 3.1 0.00011 35.6 2.5 48 163-222 31-79 (109)
475 3f4s_A Alpha-DSBA1, putative u 65.3 2.3 7.9E-05 41.7 1.8 41 152-192 38-81 (226)
476 1wjk_A C330018D20RIK protein; 64.9 23 0.00077 29.4 7.9 53 305-363 42-94 (100)
477 3ewl_A Uncharacterized conserv 64.3 7.4 0.00025 33.8 4.9 37 324-363 103-139 (142)
478 4eo3_A Bacterioferritin comigr 63.9 3.6 0.00012 42.6 3.1 95 152-252 23-137 (322)
479 3gx8_A Monothiol glutaredoxin- 63.6 5.4 0.00018 34.9 3.7 49 163-222 29-80 (121)
480 2lrt_A Uncharacterized protein 63.2 11 0.00038 33.5 5.9 33 322-354 105-137 (152)
481 2wem_A Glutaredoxin-related pr 62.4 2.9 0.0001 36.6 1.7 48 163-222 33-82 (118)
482 3gn3_A Putative protein-disulf 62.0 2 6.7E-05 40.6 0.6 32 151-182 12-43 (182)
483 3eur_A Uncharacterized protein 58.5 15 0.0005 32.0 5.8 37 322-361 105-141 (142)
484 3kp9_A Vkorc1/thioredoxin doma 56.3 2.6 8.8E-05 43.2 0.3 37 319-361 240-276 (291)
485 3gmf_A Protein-disulfide isome 53.0 4.4 0.00015 39.0 1.3 36 321-362 158-194 (205)
486 3bci_A Disulfide bond protein 51.6 5.5 0.00019 37.0 1.8 31 152-182 10-41 (186)
487 3cmi_A Peroxiredoxin HYR1; thi 49.8 37 0.0013 30.5 7.2 38 325-362 122-165 (171)
488 3u5r_E Uncharacterized protein 48.3 37 0.0013 32.3 7.2 42 320-363 133-185 (218)
489 2k6v_A Putative cytochrome C o 48.1 13 0.00044 33.4 3.6 33 329-362 136-170 (172)
490 1zof_A Alkyl hydroperoxide-red 48.0 24 0.00081 32.8 5.7 43 320-362 107-158 (198)
491 2e7p_A Glutaredoxin; thioredox 47.6 11 0.00039 31.6 3.0 40 320-363 63-106 (116)
492 3tdg_A DSBG, putative uncharac 44.0 5.6 0.00019 40.2 0.5 27 152-178 146-172 (273)
493 2in3_A Hypothetical protein; D 43.8 17 0.00058 34.3 3.9 42 201-252 167-208 (216)
494 3ira_A Conserved protein; meth 42.0 47 0.0016 30.8 6.6 43 300-345 68-118 (173)
495 2lus_A Thioredoxion; CR-Trp16, 47.2 5.7 0.00019 34.5 0.0 22 320-341 98-119 (143)
496 2bmx_A Alkyl hydroperoxidase C 40.2 43 0.0015 31.0 6.1 44 320-363 116-168 (195)
497 1we0_A Alkyl hydroperoxide red 40.0 50 0.0017 30.2 6.5 43 320-362 102-154 (187)
498 3dwv_A Glutathione peroxidase- 39.6 1.4E+02 0.0049 27.0 9.7 35 328-362 143-180 (187)
499 2ls5_A Uncharacterized protein 44.5 6.7 0.00023 35.0 0.0 42 320-362 102-145 (159)
500 2vup_A Glutathione peroxidase- 38.0 50 0.0017 30.3 6.2 37 326-362 140-182 (190)
No 1
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=1.3e-45 Score=435.23 Aligned_cols=407 Identities=19% Similarity=0.304 Sum_probs=274.4
Q ss_pred ccCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCC---ChHHHHHHHHHHHHHcCChhhhhcccccCchhhhhhhhhhc
Q 006171 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI---PSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQLHILEKVR 112 (658)
Q Consensus 36 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~---~~~~~f~~i~~Aye~L~d~~~R~~YD~~g~~~~~~~~~~~~ 112 (658)
..|||+||||+++|+.++||+|||+|+++||||+++ .+.++|++|++||++|+||.+|+.||++|..+..... +
T Consensus 20 ~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~~---~ 96 (780)
T 3apo_A 20 DQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQ---G 96 (780)
T ss_dssp ---CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-------------
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccCC---C
Confidence 679999999999999999999999999999999985 3567899999999999999999999999988765432 4
Q ss_pred cccCccccccccCCCCCCCCCCcceEEEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeee
Q 006171 113 EQYGEESYSRIDLPLLDATDHSVHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVE 192 (658)
Q Consensus 113 ~~~~~~~f~~~~fgf~~~~~~~~~~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vd 192 (658)
+++..++|++..||+|.++ +.|+.||.++|++.++++++|+|+||||||+||++++|.|+++|+.+++.+.+++||
T Consensus 97 ~~~~~~~~~~~~fg~~~~~----~~v~~l~~~~f~~~i~~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd 172 (780)
T 3apo_A 97 GQYESWSYYRYDFGIYDDD----PEIITLERREFDAAVNSGELWFVNFYSPGSSHSHDLAPTWREFAKEVDGLLRIGAVN 172 (780)
T ss_dssp -------CCSSSSSTTTTC----TTEEECCHHHHHHHHTSSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEE
T ss_pred CCcccccccchhhcccCCC----cceeeechHhHHhhhcCCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcCceEEEEEe
Confidence 5577788888788888765 368999999999999889999999999999999999999999999999889999999
Q ss_pred cccchhhhHHHhhCCCCcccceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHhhccCCcceeeccc---hhhh
Q 006171 193 LGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKE---SMGK 269 (658)
Q Consensus 193 c~e~~~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v~~lP~~~~it~~---~~~~ 269 (658)
|++++ .||++++ |+++||+++|++|.. ...|.|.++.++|++|+.+.+ .|.+..+++. +.++
T Consensus 173 ~~~~~---~l~~~~~------v~~~Pt~~~~~~g~~----~~~~~G~~~~~~l~~~l~~~~--~~~~~~i~~~~~~~~l~ 237 (780)
T 3apo_A 173 CGDDR---MLCRMKG------VNSYPSLFIFRSGMA----AVKYNGDRSKESLVAFAMQHV--RSTVTELSTGNFVNAIE 237 (780)
T ss_dssp TTTCS---SCC--------------CEEEEECTTSC----CEECCSCSCHHHHHHHHHTTS--CCCEEECCHHHHHHHHH
T ss_pred CCCcH---HHHHHcC------CceeeeEEEEeCCcE----eeEecCCCCHHHHHHHHHHhc--hhhheeccchhhHHHHH
Confidence 99654 4999998 899999999999864 478999999999999999982 2333335544 3356
Q ss_pred hhhhhcCCCcEEEEEEeCCCC-CCc-HHHHHHHHhhccCceEEEEEe---------------------------------
Q 006171 270 NFLAKTGPHKVKVIFFSKTGE-RAS-PFVRQISRNYWAYASFAFVLW--------------------------------- 314 (658)
Q Consensus 270 ~Fl~~~~~~~v~vl~f~~~~~-~~~-~~~~~~A~~~~~~~~f~~v~~--------------------------------- 314 (658)
.|+.. +.+.|++|.++.+ ++. ..++.++..|++.+.|+++..
T Consensus 238 ~~~~~---~~~~vi~f~~~~~~~~~~~~~~~l~~~f~~~~~f~~v~c~~~~~l~~~~gi~~~p~~~f~~~~~~~~~~~~~ 314 (780)
T 3apo_A 238 TAFAA---GVGWLITFCSKGEDCLTSQTRLRLSGMLDGLVNVGWVDCDAQDSLCKSLDTTASTTAYFPPGATLNDREKSS 314 (780)
T ss_dssp HHHHH---TCEEEEEEECTTSCCCCHHHHHHHHHHTTTTEEEEEEETTTSHHHHTCC-----CEEEECTTCCSSTTTGGG
T ss_pred hhhcc---CCCEEEEEecCcccccCHHHHHHHHHHhhccceEEEEEcCCCHHHHHHhCCCCCceeeeccccccCCCcccc
Confidence 66643 4566777765332 333 344556655655554544411
Q ss_pred -------------------------------------------------------------------------ccc-ccH
Q 006171 315 -------------------------------------------------------------------------REE-ESS 320 (658)
Q Consensus 315 -------------------------------------------------------------------------~~~-~s~ 320 (658)
.+| ...
T Consensus 315 ~~y~g~~~~~~i~~~i~~~~p~v~~it~~~f~~~~~~~~~lv~F~~~~~~~~~~~~~~~~A~~~~~~~i~f~~~D~~~~~ 394 (780)
T 3apo_A 315 VLFLNSLDAKEIYMEIIHNLPDFELLSANQLEDRLAHHRWLVFFHFGKNENANDPELKKLKTLLKNEHIQVVRFDCSSAP 394 (780)
T ss_dssp SEEECCCCHHHHHHHHHHHSCCCCEECHHHHHHHHTTSEEEEEEECC-----CCGGGGGHHHHHGGGTEEEEEEEGGGCH
T ss_pred eeccccccHHHHHHHHHHhCCCcccCCHHHHHHHhccCCeEEEEecCCccccchHHHHHHHHhhccCceeEEEEeCCCch
Confidence 112 135
Q ss_pred hHHhhcCCCCCCEEEEEeCCC-CCeeeecCCCChHHHHHHHHhhccCCCccccCcchhhhcccccCCcCCCCCCcccEEE
Q 006171 321 IWWNTFEVESAPAIVFLKDPG-VKPVVYYGSFNNSRLSEVMEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYCV 399 (658)
Q Consensus 321 ~l~~~f~V~~~Ptlvlfk~~~-~~p~~y~g~~~~~~L~~fi~~~~~~~vP~lts~~~~~~~c~~~~~~~~~k~~~~~lcV 399 (658)
.++++|+++. |++++|+..+ +.+..|.|..+.+.|.+|+..+..+.+.+++..+..+. . ++ ..+|
T Consensus 395 ~~~~~~~~~~-p~i~l~~~~~~e~~~~~~g~~~~~~i~~f~~~~~~~~v~~l~~~~~~~~---~------~~----~vlv 460 (780)
T 3apo_A 395 GICSDLYVFQ-PSLAVFKGQGTKEYEIHHGKKILYDILAFAKESVNSHVTTLGPQNFPAS---D------KE----PWLV 460 (780)
T ss_dssp HHHHHTTCCS-CEEEEEESSTTSSEEECCSCCCHHHHHHHHHHHHTSCEEECCTTTSCTT---C------CS----CEEE
T ss_pred hhHhhccccC-ChhhhccCCCcceeeecccHhhHHHHHHHhhhccCCCCEecCHHHHHHc---C------CC----eEEE
Confidence 5888899875 9999999876 45777999999999999999999999999998886542 1 22 2333
Q ss_pred EEEcCCChhHHHHHHHHHHHHHhhccccccccccccCCchHHHHhcCCCcEEEEEEeccchHHHHHHHcccCCcccccCC
Q 006171 400 ILAGRLSPELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAFRNKRLTFAWLDGEAQDRYCSFYLFSETSFETCGA 479 (658)
Q Consensus 400 i~~~~~~~~~~~~~~~lr~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~~v~F~wvd~~~q~~~~~~f~~~~~~~~~c~~ 479 (658)
.+...--.....+...++++++ .+++ ++.|++||.+...+.++.|-
T Consensus 461 ~F~a~wC~~c~~~~p~~~~~a~----------------------~~~~-~v~~~~vd~~~~~~~~~~~~----------- 506 (780)
T 3apo_A 461 DFFAPWSPPSRALLPELRKAST----------------------LLYG-QLKVGTLDCTIHEGLCNMYN----------- 506 (780)
T ss_dssp EEECTTCHHHHHHHHHHHHHHH----------------------HTTT-TCEEEEEETTTCHHHHHHTT-----------
T ss_pred EEECCCCHHHHHHhHHHHHHHH----------------------HhcC-CeEEEEEeCCCCHHHHHHcC-----------
Confidence 3333333455666777777776 5654 49999999998888888772
Q ss_pred cCCCCCCCeEEEEEeecCCccccceeccccCcccccccccccCccccchhccCCCCChhHHHHHHHHHhh
Q 006171 480 RRDMSDVPRLFIVRYKRNTTEDEAKIERKPRNIWDAMQEQEVDPASQLVVRYNGSDEIPQIAKWVSEIIQ 549 (658)
Q Consensus 480 ~~~~~~~p~vvI~~~~~n~~~~~~k~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~ 549 (658)
+...|.++++ +... ++ .|.|..+.++|.+||.+++.
T Consensus 507 ---v~~~Pt~~~~----~~g~---~~------------------------~~~g~~~~~~l~~fi~~~~~ 542 (780)
T 3apo_A 507 ---IQAYPTTVVF----NQSS---IH------------------------EYEGHHSAEQILEFIEDLRN 542 (780)
T ss_dssp ---CCSSSEEEEE----ETTE---EE------------------------EECSCSCHHHHHHHHHHHHS
T ss_pred ---CCcCCeEEEE----cCCc---ee------------------------eecCcccHHHHHHHHHhhcc
Confidence 2235999987 2222 11 13445566899999999997
No 2
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=100.00 E-value=8e-36 Score=322.13 Aligned_cols=320 Identities=13% Similarity=0.217 Sum_probs=242.1
Q ss_pred eEEEecCCCCCccccCCCcEEEEEeccCCCCC---CCCh---HHHHHHHHHhhcc-cceeeeecccchhhhHHHhhCCCC
Q 006171 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLC---GQFS---GAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIG 209 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~C---k~l~---P~w~~~A~~l~g~-~~vg~Vdc~e~~~~~~Lc~k~~i~ 209 (658)
.|+.||.+||++.|.++++|||+||||||+|| ++++ |+|+++|+.+++. +.+++|||+++ ..||++++
T Consensus 14 ~v~~lt~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~---~~l~~~~~-- 88 (367)
T 3us3_A 14 RVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKD---AAVAKKLG-- 88 (367)
T ss_dssp CCEECCTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTT---HHHHHHHT--
T ss_pred ccEECCHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCccc---HHHHHHcC--
Confidence 57999999999999889999999999999996 3333 7999999999875 69999999954 45999999
Q ss_pred cccceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHhhccCCcceeeccchhhhhhhhhcCCCcEEEEEEeCCC
Q 006171 210 QIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTG 289 (658)
Q Consensus 210 k~f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~~~~ 289 (658)
|++||||++|++|.. ..|.|.|++++|++|+.+++ .|.+..+++.+.++.|+... ...++|.||.+.+
T Consensus 89 ----V~~~PTl~~f~~G~~-----~~y~G~~~~~~i~~~i~~~~--~~~v~~i~~~~~~~~~~~~~-~~~~vv~ff~~~~ 156 (367)
T 3us3_A 89 ----LTEEDSIYVFKEDEV-----IEYDGEFSADTLVEFLLDVL--EDPVELIEGERELQAFENIE-DEIKLIGYFKNKD 156 (367)
T ss_dssp ----CCSTTEEEEEETTEE-----EECCSCCSHHHHHHHHHHHH--SCSEEECCSHHHHHHHHHCC-SSCEEEEECSCTT
T ss_pred ----CCcCceEEEEECCcE-----EEeCCCCCHHHHHHHHHHhc--CCCcEEcCCHHHHHHHhccC-CCcEEEEEECCCC
Confidence 889999999998853 68999999999999999983 45555566544478887621 2335555666543
Q ss_pred CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCC-CChHHHHHHHHhhccCCC
Q 006171 290 ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS-FNNSRLSEVMEQNKLQEL 368 (658)
Q Consensus 290 ~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~-~~~~~L~~fi~~~~~~~v 368 (658)
....+.+..+|..+++.+.|+.+. +..++++|+|+ .|+|++|++++..++.|.|. ++.+.|.+||+.+.+|++
T Consensus 157 ~~~~~~f~~~A~~~~~~~~F~~~~-----~~~~~~~~~v~-~p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v 230 (367)
T 3us3_A 157 SEHYKAFKEAAEEFHPYIPFFATF-----DSKVAKKLTLK-LNEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRSTL 230 (367)
T ss_dssp CHHHHHHHHHHHHHTTTSCEEEEC-----CHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHTCSCSE
T ss_pred chHHHHHHHHHHhhcCCcEEEEEC-----CHHHHHHcCCC-CCeEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcCccce
Confidence 333456778999998889999874 45699999998 49999999987888899995 899999999999999999
Q ss_pred ccccCcchhhhcccccCCcCCCCCCcccEEEEEEcC-CChhHHHHHHHHHHHHHhhccccccccccccCCchHHHHhcCC
Q 006171 369 PQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGR-LSPELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAFRN 447 (658)
Q Consensus 369 P~lts~~~~~~~c~~~~~~~~~k~~~~~lcVi~~~~-~~~~~~~~~~~lr~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~ 447 (658)
++++..+..+..+.. .. ..+++++.+ ..++.+++.+.++.+|+ .|++
T Consensus 231 ~elt~~~~~~~~~~~-----~~-----~~~~~~f~~~~~~~~~~~~~~l~~vA~----------------------~~~~ 278 (367)
T 3us3_A 231 RKLKPESMYETWEDD-----MD-----GIHIVAFAEEADPDGYEFLEILKSVAQ----------------------DNTD 278 (367)
T ss_dssp EECCGGGHHHHHHSC-----BT-----TEEEEEECCTTSHHHHHHHHHHHHHHH----------------------HTTT
T ss_pred eecChhhHHHHHhhc-----cC-----CcEEEEEEcCCChhHHHHHHHHHHHHH----------------------HcCC
Confidence 999999977644421 01 133444555 44556777788888777 7776
Q ss_pred C-cEEEEEEeccchHHHHHH----HcccCCcccccCCcCCCCCCCeEEEEEeecCCccc-cceeccccCccccccccccc
Q 006171 448 K-RLTFAWLDGEAQDRYCSF----YLFSETSFETCGARRDMSDVPRLFIVRYKRNTTED-EAKIERKPRNIWDAMQEQEV 521 (658)
Q Consensus 448 ~-~v~F~wvd~~~q~~~~~~----f~~~~~~~~~c~~~~~~~~~p~vvI~~~~~n~~~~-~~k~~~~~w~~~~~~~~~~~ 521 (658)
+ ++.|+|+|+..++..++. |-.. .+.|.++|+ |.+.. ..+|. + ++.
T Consensus 279 ~~ki~F~~id~~~~~~~l~~~~~~fgl~-------------~~~P~~~i~----~~~~~~~~~y~------~---~~~-- 330 (367)
T 3us3_A 279 NPDLSIIWIDPDDFPLLVPYWEKTFDID-------------LSAPQIGVV----NVTDADSVWME------M---DDE-- 330 (367)
T ss_dssp CTTCCEEEECGGGCTTTHHHHHHHHTCC-------------TTSCEEEEE----ETTTCCEEECC------C---CTT--
T ss_pred CCceEEEEECCccchhHHHHHHHhcCCC-------------CCCCeEEEE----ecccccceeec------C---Ccc--
Confidence 5 699999999887765543 5111 145999999 65431 12332 2 220
Q ss_pred CccccchhccCCCCChhHHHHHHHHHhh
Q 006171 522 DPASQLVVRYNGSDEIPQIAKWVSEIIQ 549 (658)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~i~~~i~~~~~ 549 (658)
++.-+.++|.+||.+++.
T Consensus 331 ----------~~~~t~~~i~~F~~~~~~ 348 (367)
T 3us3_A 331 ----------EDLPSAEELEDWLEDVLE 348 (367)
T ss_dssp ----------SCCCCHHHHHHHHHHHHH
T ss_pred ----------cccCCHHHHHHHHHHHHc
Confidence 012266899999999998
No 3
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=100.00 E-value=2e-37 Score=308.50 Aligned_cols=197 Identities=26% Similarity=0.497 Sum_probs=171.5
Q ss_pred cCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCC---ChHHHHHHHHHHHHHcCChhhhhcccccCchhhhhhhhhhcc
Q 006171 37 PSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI---PSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQLHILEKVRE 113 (658)
Q Consensus 37 ~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~---~~~~~f~~i~~Aye~L~d~~~R~~YD~~g~~~~~~~~~~~~~ 113 (658)
.|||+||||+++|+.++||+|||+|+++||||+++ .+.++|++|++||++|+||.+|+.||++|..+.... .++
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~---~~~ 78 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN---QGG 78 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTT---CSC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccccc---ccc
Confidence 48999999999999999999999999999999985 366789999999999999999999999998775432 244
Q ss_pred ccCccccccccCCCCCCCCCCcceEEEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeec
Q 006171 114 QYGEESYSRIDLPLLDATDHSVHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVEL 193 (658)
Q Consensus 114 ~~~~~~f~~~~fgf~~~~~~~~~~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc 193 (658)
++..+.|+...|++|..+ ..|..|+.++|+..+.++++++|.|||+||++|+.+.|.|+++++.+++.+.++.|||
T Consensus 79 ~~~~~~~~~~~fg~~~~~----~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~ 154 (210)
T 3apq_A 79 QYESWSYYRYDFGIYDDD----PEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNC 154 (210)
T ss_dssp CCCCHHHHHHSSSTTTTC----TTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEET
T ss_pred cccccccccccccccCCC----CceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEEC
Confidence 455566666667777654 2468899999999998889999999999999999999999999999988889999999
Q ss_pred ccchhhhHHHhhCCCCcccceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHhh
Q 006171 194 GDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (658)
Q Consensus 194 ~e~~~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v 253 (658)
++++ .+|++++ |.++||+++|++|.. ...|.|.++.+.|.+|+.+.+
T Consensus 155 ~~~~---~l~~~~~------v~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~i~~~l 201 (210)
T 3apq_A 155 GDDR---MLCRMKG------VNSYPSLFIFRSGMA----AVKYNGDRSKESLVAFAMQHV 201 (210)
T ss_dssp TTCH---HHHHHTT------CCSSSEEEEECTTSC----CEECCSCCCHHHHHHHHHHHH
T ss_pred CccH---HHHHHcC------CCcCCeEEEEECCCc----eeEecCCCCHHHHHHHHHHhC
Confidence 9554 5999999 889999999988754 577899999999999999873
No 4
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=100.00 E-value=2.2e-34 Score=308.52 Aligned_cols=319 Identities=13% Similarity=0.188 Sum_probs=244.2
Q ss_pred eEEEecCCCCCccccCCCcEEEEEeccCCCCCCCChHH-------HHHHHHHhhcc-cceeeeecccchhhhHHHhhCCC
Q 006171 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGA-------WKTIAALLEGI-ANTGMVELGDIRLATHLAERKPI 208 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~-------w~~~A~~l~g~-~~vg~Vdc~e~~~~~~Lc~k~~i 208 (658)
.|+.||.+||++.+.++++|||+||||||+ |++++|. |+++|+.+++. +.+++|||+++ ..+|++++
T Consensus 12 ~v~~l~~~~f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~---~~l~~~~~- 86 (350)
T 1sji_A 12 RVVSLTEKNFKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKE---AKLAKKLG- 86 (350)
T ss_dssp CCEEECHHHHHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTT---HHHHHHHT-
T ss_pred ccEECCHHHHHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCC---HHHHHhcC-
Confidence 578999999999998889999999999999 9999999 99999999885 79999999955 45999999
Q ss_pred CcccceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHhhccCCcceeeccchhhhhhhh-hcCCCcEEEEEEeC
Q 006171 209 GQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLA-KTGPHKVKVIFFSK 287 (658)
Q Consensus 209 ~k~f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v~~lP~~~~it~~~~~~~Fl~-~~~~~~v~vl~f~~ 287 (658)
|++|||+++|++|. ...|.|.|+.++|++|+.+.+ .|.+..+++.+.++.|+. .. ..+.|.||.+
T Consensus 87 -----v~~~Pt~~~~~~g~-----~~~~~G~~~~~~l~~~i~~~~--~~~~~~l~~~~~~~~~~~~~~--~~~vv~ff~~ 152 (350)
T 1sji_A 87 -----FDEEGSLYVLKGDR-----TIEFDGEFAADVLVEFLLDLI--EDPVEIINSKLEVQAFERIED--QIKLIGFFKS 152 (350)
T ss_dssp -----CCSTTEEEEEETTE-----EEEECSCCCHHHHHHHHHTTS--SCSEEECCSHHHHHHHHHCCS--SCEEEEECSC
T ss_pred -----CCccceEEEEECCc-----EEEecCCCCHHHHHHHHHHhc--CCcceeccchHHHHHHhccCC--CcEEEEEECC
Confidence 88999999998885 368999999999999999883 344555655444788875 33 2354556665
Q ss_pred CCCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCC-CChHHHHHHHHhhccC
Q 006171 288 TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS-FNNSRLSEVMEQNKLQ 366 (658)
Q Consensus 288 ~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~-~~~~~L~~fi~~~~~~ 366 (658)
.+....+.+..+|..+++.+.|+.+. .+.++++|+++ +|+|++|++++..++.|.|. ++.++|.+|++.+.+|
T Consensus 153 ~~~~~~~~~~~~A~~~~~~~~f~~~~-----~~~~~~~~~v~-~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p 226 (350)
T 1sji_A 153 EESEYYKAFEEAAEHFQPYIKFFATF-----DKGVAKKLSLK-MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQRP 226 (350)
T ss_dssp TTSHHHHHHHHHHHHTTTTSEEEEEC-----CHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHCCC
T ss_pred CCcHHHHHHHHHHHhhccCcEEEEEC-----CHHHHHHcCCC-CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcCcc
Confidence 33333466777899998899998873 45699999999 99999999887788889997 8999999999999999
Q ss_pred CCccccCcchhhhcccccCCcCCCCCCcccEEEEEEcCC-ChhHHHHHHHHHHHHHhhccccccccccccCCchHHHHhc
Q 006171 367 ELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRL-SPELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAF 445 (658)
Q Consensus 367 ~vP~lts~~~~~~~c~~~~~~~~~k~~~~~lcVi~~~~~-~~~~~~~~~~lr~~a~~~~~~~~~~~~~~~~~~~~~A~~~ 445 (658)
++++++..+..+ +|... .. .+|++++... ..+..+.++.++++|+ ++
T Consensus 227 ~v~elt~~~~~~-~~~~~----~~-----~~~~l~f~~~~~~~~~~~~~~~~~vA~----------------------~~ 274 (350)
T 1sji_A 227 TLRRLRPEDMFE-TWEDD----LN-----GIHIVAFAERSDPDGYEFLEILKQVAR----------------------DN 274 (350)
T ss_dssp SEEECCTTTHHH-HHHSC----SS-----SEEEEEECCTTSHHHHHHHHHHHHHHH----------------------HG
T ss_pred chhhcChhhHHH-HhcCC----CC-----CcEEEEEEcCCCccHHHHHHHHHHHHH----------------------Hh
Confidence 999999999865 56320 01 2677777653 3345677788888777 56
Q ss_pred C-CCcEEEEEEeccchHHHH----HHHcccCCcccccCCcCCCCCCCeEEEEEeecCCccccceeccccCcccccccccc
Q 006171 446 R-NKRLTFAWLDGEAQDRYC----SFYLFSETSFETCGARRDMSDVPRLFIVRYKRNTTEDEAKIERKPRNIWDAMQEQE 520 (658)
Q Consensus 446 ~-~~~v~F~wvd~~~q~~~~----~~f~~~~~~~~~c~~~~~~~~~p~vvI~~~~~n~~~~~~k~~~~~w~~~~~~~~~~ 520 (658)
+ +.++.|+|+|++.++.++ +.|-. + .+.|.|+|+ |.+.. .+|.. - + ++
T Consensus 275 ~~~~~~~f~~id~~~~~~~~~~~~~~~gi------------~-~~~P~~~i~----~~~~~-~~~~~--~--~---~~-- 327 (350)
T 1sji_A 275 TDNPDLSIVWIDPDDFPLLVAYWEKTFKI------------D-LFKPQIGVV----NVTDA-DSVWM--E--I---PD-- 327 (350)
T ss_dssp GGCSSCCEEEECGGGCHHHHHHHHHHCCS------------C-TTSCEEEEE----ESSSS-CEEES--C--S---SC--
T ss_pred CCCCceEEEEECchhhHHHHHHHHhhcCC------------C-ccCCcEEEE----ecccc-ccccc--C--C---Cc--
Confidence 5 356999999999888877 45511 1 135999998 55331 12210 0 1 11
Q ss_pred cCccccchhccCCCCChhHHHHHHHHHhh
Q 006171 521 VDPASQLVVRYNGSDEIPQIAKWVSEIIQ 549 (658)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~i~~~i~~~~~ 549 (658)
.++..+.++|.+||++++.
T Consensus 328 ----------~~~~~~~~~i~~F~~d~~~ 346 (350)
T 1sji_A 328 ----------DDDLPTAEELEDWIEDVLS 346 (350)
T ss_dssp ----------CSCCCCHHHHHHHHHHHHT
T ss_pred ----------ccccCCHHHHHHHHHHHhc
Confidence 0123466899999999998
No 5
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.1e-34 Score=308.86 Aligned_cols=333 Identities=12% Similarity=0.145 Sum_probs=218.5
Q ss_pred cceEEEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhh------cccceeeeecccchhhhHHHhhCCC
Q 006171 135 VHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE------GIANTGMVELGDIRLATHLAERKPI 208 (658)
Q Consensus 135 ~~~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~------g~~~vg~Vdc~e~~~~~~Lc~k~~i 208 (658)
.+.|+.||.++|++.+.++++|||+||||||+||++++|+|+++|+.++ +.+.+++|||+++ ..||++++
T Consensus 4 ~~~v~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~---~~l~~~~~- 79 (382)
T 2r2j_A 4 GSEITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQH---SDIAQRYR- 79 (382)
T ss_dssp ----CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTC---HHHHHHTT-
T ss_pred CCceEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCcc---HHHHHhcC-
Confidence 4568899999999988888999999999999999999999999999994 4468999999955 45999999
Q ss_pred CcccceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHhhccCCcceeeccchhhhhhhhhcCCCcEEEEEEeCC
Q 006171 209 GQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKT 288 (658)
Q Consensus 209 ~k~f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~~~ 288 (658)
|++|||+++|++|.. ....|.|.++.++|++|+.+.+ .|.+..+++.+.++. +.. ...++|.||.+.
T Consensus 80 -----v~~~Pt~~~f~~G~~---~~~~~~G~~~~~~l~~~i~~~~--~~~v~~l~~~~~l~~-l~~--~~~~~v~ff~~~ 146 (382)
T 2r2j_A 80 -----ISKYPTLKLFRNGMM---MKREYRGQRSVKALADYIRQQK--SDPIQEIRDLAEITT-LDR--SKRNIIGYFEQK 146 (382)
T ss_dssp -----CCEESEEEEEETTEE---EEEECCSCCSHHHHHHHHHHHH--SCCCEEC---------------CCEEEEEESCS
T ss_pred -----CCcCCEEEEEeCCcE---eeeeecCcchHHHHHHHHHHhc--cCCceecCCHHHHHH-hcC--CCCEEEEEECCC
Confidence 889999999998854 1236999999999999999984 344444544332444 322 234556666543
Q ss_pred CCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCC--CCCeeeecCCC-ChHHHHHHHHhhcc
Q 006171 289 GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP--GVKPVVYYGSF-NNSRLSEVMEQNKL 365 (658)
Q Consensus 289 ~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~--~~~p~~y~g~~-~~~~L~~fi~~~~~ 365 (658)
.......+..+|..+++.+.|+.+.. ++.+++++++.| + +|+++ ...+..|.|.+ +.+.|.+||+.+.+
T Consensus 147 ~~~~~~~f~~~A~~~~~~~~F~~~~~------~~~~~~~v~~~p-i-~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~ 218 (382)
T 2r2j_A 147 DSDNYRVFERVANILHDDCAFLSAFG------DVSKPERYSGDN-I-IYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCV 218 (382)
T ss_dssp SSHHHHHHHHHHHHHTTTCEEEEEES------CC--------CE-E-EEECSSSSSCCEECCSCTTCHHHHHHHHHHHHS
T ss_pred CChhHHHHHHHHHHhhccceEEEEeh------hhHHhhCCCCCc-e-EECCCCCCCcCcccCCCCCCHHHHHHHHHhccc
Confidence 21112356778899988888887752 367788998888 5 45544 23567899998 89999999999999
Q ss_pred CCCccccCcchhhhcccccCCcCCCCCCcccEEEEEEcCCC-hhHHHHHHHHHHHHHhhccccccccccccCCchHHHHh
Q 006171 366 QELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRLS-PELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVA 444 (658)
Q Consensus 366 ~~vP~lts~~~~~~~c~~~~~~~~~k~~~~~lcVi~~~~~~-~~~~~~~~~lr~~a~~~~~~~~~~~~~~~~~~~~~A~~ 444 (658)
|++++++..+..+..|.. + .+|++++.... ...+.+++.+.+++. .
T Consensus 219 p~v~elt~~~~~~~~~~~-------~----~~~v~f~~~~~~~~~~~~~~~~~~~~~----------------------~ 265 (382)
T 2r2j_A 219 PLVREITFENGEELTEEG-------L----PFLILFHMKEDTESLEIFQNEVARQLI----------------------S 265 (382)
T ss_dssp CSSEECCHHHHHHHHTTC-------C----CEEEEEECTTCCHHHHHHHHHHHHHTG----------------------G
T ss_pred CceEecChhhHHHHhcCC-------C----cEEEEEecCCchHHHHHHHHHHHHHHH----------------------H
Confidence 999999999987755532 2 47777665432 222333333332222 4
Q ss_pred cCCCcEEEEEEeccchHHHHHHHcccCCcccccCCcCCCCCCCeEEEEEeecCCccccceeccccCcccccccccccCcc
Q 006171 445 FRNKRLTFAWLDGEAQDRYCSFYLFSETSFETCGARRDMSDVPRLFIVRYKRNTTEDEAKIERKPRNIWDAMQEQEVDPA 524 (658)
Q Consensus 445 ~~~~~v~F~wvd~~~q~~~~~~f~~~~~~~~~c~~~~~~~~~p~vvI~~~~~n~~~~~~k~~~~~w~~~~~~~~~~~~~~ 524 (658)
+++ ++.|+|+|++.+..+++.|..+. .+.|.|+|+ |.... +++.. + ++
T Consensus 266 ~~~-~i~f~~id~~~~~~~~~~~gl~~------------~~~P~i~i~----~~~~~-y~~~~-----~---~~------ 313 (382)
T 2r2j_A 266 EKG-TINFLHADCDKFRHPLLHIQKTP------------ADCPVIAID----SFRHM-YVFGD-----F---KD------ 313 (382)
T ss_dssp GTT-TSEEEEEETTTTHHHHHHTTCCG------------GGCSEEEEE----CSSCE-EECCC-----S---GG------
T ss_pred hCC-eeEEEEEchHHhHHHHHHcCCCc------------cCCCEEEEE----cchhc-CCCCc-----c---cc------
Confidence 554 69999999999999998883321 145999887 54331 22220 1 11
Q ss_pred ccchhccCCCCChhHHHHHHHHHhhcCCCCCCCcccCCCCCCCC
Q 006171 525 SQLVVRYNGSDEIPQIAKWVSEIIQDGDSKDLPFYRAKTPELVP 568 (658)
Q Consensus 525 ~~~~~~~~~~~~~~~i~~~i~~~~~~g~~~~l~~~~~~~p~l~~ 568 (658)
..+.+.|.+||.+++. +.....++++++|+-.+
T Consensus 314 ---------~~~~~~i~~F~~d~~~--Gkl~p~~kse~~P~~~~ 346 (382)
T 2r2j_A 314 ---------VLIPGKLKQFVFDLHS--GKLHREFHHGPDPTDTA 346 (382)
T ss_dssp ---------GGSTTHHHHHHHHHHH--TTTSSCC----------
T ss_pred ---------ccCHHHHHHHHHHHHC--CCccccccCCCCCCCCC
Confidence 1133789999999999 66677779999999875
No 6
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=100.00 E-value=1.2e-32 Score=307.05 Aligned_cols=331 Identities=15% Similarity=0.178 Sum_probs=247.4
Q ss_pred eEEEecCCCCCccccCC---CcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccc
Q 006171 137 AFNVVTSEDFPSIFHDS---KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~---~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~ 213 (658)
.|+.||.++|++.+.++ ++|+|+||||||+||+++.|.|+++|+.+++.+.+++|||+++ ..||++++
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~---~~l~~~~~------ 72 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTAN---TNTCNKYG------ 72 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTC---HHHHHHTT------
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCC---HHHHHhcC------
Confidence 47899999999999666 9999999999999999999999999999998899999999954 45999999
Q ss_pred eeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHhhccCCcceeeccchhhhhhhhhcCCCcEEEEEEeCCCCCCc
Q 006171 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGERAS 293 (658)
Q Consensus 214 V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~~~~~~~~ 293 (658)
|++||||++|++|.. ...|.|.++.+.|++|+.+.+ .|....+++.+.++.|++.. ..+.|.||.+.+....
T Consensus 73 v~~~Ptl~~~~~g~~----~~~~~G~~~~~~l~~~~~~~~--~~~~~~i~~~~~~~~~~~~~--~~~vv~~~~~~~~~~~ 144 (481)
T 3f8u_A 73 VSGYPTLKIFRDGEE----AGAYDGPRTADGIVSHLKKQA--GPASVPLRTEEEFKKFISDK--DASIVGFFDDSFSEAH 144 (481)
T ss_dssp CCEESEEEEEETTEE----EEECCSCSSHHHHHHHHHHHT--SCSEEEECSHHHHHHHTTSS--SCEEEEEESCTTCHHH
T ss_pred CCCCCEEEEEeCCce----eeeecCccCHHHHHHHHHhhc--ccCceecCCHHHHHHHHhcC--CcEEEEEECCCccchH
Confidence 889999999998853 578999999999999999982 34444465545577887643 2343446655443345
Q ss_pred HHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEe------CCCCCeeeec-CCCChHHHHHHHHhhccC
Q 006171 294 PFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLK------DPGVKPVVYY-GSFNNSRLSEVMEQNKLQ 366 (658)
Q Consensus 294 ~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk------~~~~~p~~y~-g~~~~~~L~~fi~~~~~~ 366 (658)
..+..+|..+++.+.|+.+. +..++++|+++..| |++|+ ..+..++.|. |.++.+.|.+||+.+++|
T Consensus 145 ~~f~~~a~~~~~~~~F~~~~-----~~~~~~~~~v~~~~-i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p 218 (481)
T 3f8u_A 145 SEFLKAASNLRDNYRFAHTN-----VESLVNEYDDNGEG-IILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFG 218 (481)
T ss_dssp HHHHHHHHHHTTTSCEEEEC-----CHHHHHHHCSSSEE-EEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhccCceEEEEC-----CHHHHHHhCCCCCc-EEEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCC
Confidence 56677899998999999873 45699999998644 88888 4556778898 888999999999999999
Q ss_pred CCccccCcchhhhcccccCCcCCCCCCcccEEEEEEcCCCh----hHHHHHHHHHHHHHhhccccccccccccCCchHHH
Q 006171 367 ELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRLSP----ELNKMRETIRRVQETLLSDDESNAADTDQSLAPAA 442 (658)
Q Consensus 367 ~vP~lts~~~~~~~c~~~~~~~~~k~~~~~lcVi~~~~~~~----~~~~~~~~lr~~a~~~~~~~~~~~~~~~~~~~~~A 442 (658)
++++++..+..+ ++. . .++++++..... ..+.+++.++.+|+
T Consensus 219 ~v~e~t~~n~~~-~~~-------~-----~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~--------------------- 264 (481)
T 3f8u_A 219 ICPHMTEDNKDL-IQG-------K-----DLLIAYYDVDYEKNAKGSNYWRNRVMMVAK--------------------- 264 (481)
T ss_dssp TSCEECTTTHHH-HTT-------S-----SEEEEEECCCTTTCHHHHHHHHHHHHHHHH---------------------
T ss_pred CccccChhHHHH-hcC-------C-----CceEEEEecccccchhhHHHHHHHHHHHHH---------------------
Confidence 999999999765 331 1 255555433211 12335677777777
Q ss_pred HhcCC--CcEEEEEEeccchHHHHHHHcccCCcccccCCcCCCCCCCeEEEEEeecCCccccceeccccCcccccccccc
Q 006171 443 VAFRN--KRLTFAWLDGEAQDRYCSFYLFSETSFETCGARRDMSDVPRLFIVRYKRNTTEDEAKIERKPRNIWDAMQEQE 520 (658)
Q Consensus 443 ~~~~~--~~v~F~wvd~~~q~~~~~~f~~~~~~~~~c~~~~~~~~~p~vvI~~~~~n~~~~~~k~~~~~w~~~~~~~~~~ 520 (658)
.+++ .++.|+|+|++.....++.|-... ...+.|.|+|+ +... .+|. + ++
T Consensus 265 -~~~~k~~~i~F~~~D~~~~~~~l~~~gl~~----------~~~~~P~~~i~----~~~~--~ky~------~---~~-- 316 (481)
T 3f8u_A 265 -KFLDAGHKLNFAVASRKTFSHELSDFGLES----------TAGEIPVVAIR----TAKG--EKFV------M---QE-- 316 (481)
T ss_dssp -HHHHTTCCCEEEEEETTTTHHHHGGGTCCC----------CTTCSCEEEEE----CSSS--CEEE------C---CS--
T ss_pred -HhcCCCceEEEEEEcHHHHHHHHHHcCCCc----------ccCCCcEEEEE----cCCC--cccC------C---Cc--
Confidence 4433 349999999988888887772221 12356999998 5433 3444 2 21
Q ss_pred cCccccchhccCCCCChh--HHHHHHHHHhhcCCCCCCCcccCCCCCCC
Q 006171 521 VDPASQLVVRYNGSDEIP--QIAKWVSEIIQDGDSKDLPFYRAKTPELV 567 (658)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~--~i~~~i~~~~~~g~~~~l~~~~~~~p~l~ 567 (658)
.-+.+ .|++||.+++. +.....+.++.+|+-.
T Consensus 317 -------------~~t~e~~~l~~f~~~~~~--g~~~~~~~s~~~p~~~ 350 (481)
T 3f8u_A 317 -------------EFSRDGKALERFLQDYFD--GNLKRYLKSEPIPESN 350 (481)
T ss_dssp -------------CCCTTSHHHHHHHHHHHH--TCCCCCCCCCCCCSCC
T ss_pred -------------ccCccHHHHHHHHHHHhc--CCcccccccCCCCCCC
Confidence 11335 99999999998 4555444788888653
No 7
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.98 E-value=5.2e-32 Score=303.77 Aligned_cols=334 Identities=14% Similarity=0.149 Sum_probs=246.2
Q ss_pred ceEEEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchhhhHHHhhCCCCcccce
Q 006171 136 HAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIGQIFFR 214 (658)
Q Consensus 136 ~~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V 214 (658)
+.|+.||.+||++.+.++++|||+||||||+||+++.|.|+++|+.+++. +.+++|||+++ ..||++++ |
T Consensus 14 ~~v~~l~~~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~---~~l~~~~~------v 84 (504)
T 2b5e_A 14 SAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTEN---QDLCMEHN------I 84 (504)
T ss_dssp SSCEECCTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTC---HHHHHHTT------C
T ss_pred CCcEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCC---HHHHHhcC------C
Confidence 35899999999999988999999999999999999999999999999986 79999999955 45999999 8
Q ss_pred eeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHhhccCCcceeeccchhhhhhhhhcCCCcEEEEEEeCCCCCCcH
Q 006171 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGERASP 294 (658)
Q Consensus 215 ~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~~~~~~~~~ 294 (658)
++|||+++|++|.. .....|.|.++.+.|++|+.+.+ .|.+..+++ ++.|++......++|++|.+.......
T Consensus 85 ~~~Pt~~~~~~g~~--~~~~~~~G~~~~~~l~~~l~~~~--~~~v~~i~~---~~~~~~~~~~~~~~v~~f~~~~~~~~~ 157 (504)
T 2b5e_A 85 PGFPSLKIFKNSDV--NNSIDYEGPRTAEAIVQFMIKQS--QPAVAVVAD---LPAYLANETFVTPVIVQSGKIDADFNA 157 (504)
T ss_dssp CSSSEEEEEETTCT--TCEEECCSCCSHHHHHHHHHHHT--SCSEEECSC---HHHHHHHSCCSSCEEEEEESCCHHHHH
T ss_pred CcCCEEEEEeCCcc--ccceeecCCCCHHHHHHHHHHhc--CCcceeHHH---HHHHHhcCCCceEEEEEeCCCCchHHH
Confidence 89999999998863 11578999999999999999983 244444554 678887542225667778754333456
Q ss_pred HHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCC-C---ChHHHHHHHHhhccCCCcc
Q 006171 295 FVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS-F---NNSRLSEVMEQNKLQELPQ 370 (658)
Q Consensus 295 ~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~-~---~~~~L~~fi~~~~~~~vP~ 370 (658)
.++.+|..+++.+.|+.+. +++++++++ +++|++.+ .++.|.|. + +.+.|.+||..+.+|++++
T Consensus 158 ~f~~~A~~~~~~~~F~~~~-------~~~~~~~~~----i~l~~~~~-~~~~~~g~~~~~~~~~~l~~fi~~~~~p~v~~ 225 (504)
T 2b5e_A 158 TFYSMANKHFNDYDFVSAE-------NADDDFKLS----IYLPSAMD-EPVVYNGKKADIADADVFEKWLQVEALPYFGE 225 (504)
T ss_dssp HHHHHHHHTTTTCEEEEEE-------CTTSCCEEE----EEETTEEE-EEEECCSCHHHHTSHHHHHHHHHHHSSCSSCB
T ss_pred HHHHHHHHhhcCcEEEEEH-------HHHHhcCCe----EEecCCCC-cccccCCcccccCCHHHHHHHHHhcccCCccc
Confidence 6778999999999998875 366778875 88888765 77889998 6 8899999999999999999
Q ss_pred ccCcchhhhcccccCCcCCCCCCcccEEEEEEcCCChhHHHHHHHHHHHHHhhccccccccccccCCchHHHHhcCCCcE
Q 006171 371 LRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRLSPELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAFRNKRL 450 (658)
Q Consensus 371 lts~~~~~~~c~~~~~~~~~k~~~~~lcVi~~~~~~~~~~~~~~~lr~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~~v 450 (658)
++..+..+ +|.. +. .+ ++++.......+.+++.++++++ .+++ ++
T Consensus 226 ~t~~~~~~-~~~~------~~----~~-~~l~~~~~~~~~~~~~~l~~~a~----------------------~~~~-~i 270 (504)
T 2b5e_A 226 IDGSVFAQ-YVES------GL----PL-GYLFYNDEEELEEYKPLFTELAK----------------------KNRG-LM 270 (504)
T ss_dssp CCHHHHHH-HHHT------TS----CE-EEEEESSHHHHHHHHHHHHHHHH----------------------HTTT-TC
T ss_pred CCHhHHHH-HhcC------CC----cE-EEEEecCcccHHHHHHHHHHHHH----------------------hcCC-ee
Confidence 99998754 4532 11 23 33343433344667777777777 6665 49
Q ss_pred EEEEEeccchHHHHHHHcccCCcccccCCcCCCCCCCeEEEEEeecCCccccceeccccCcccccccc-cccCccccchh
Q 006171 451 TFAWLDGEAQDRYCSFYLFSETSFETCGARRDMSDVPRLFIVRYKRNTTEDEAKIERKPRNIWDAMQE-QEVDPASQLVV 529 (658)
Q Consensus 451 ~F~wvd~~~q~~~~~~f~~~~~~~~~c~~~~~~~~~p~vvI~~~~~n~~~~~~k~~~~~w~~~~~~~~-~~~~~~~~~~~ 529 (658)
.|+|+|++.+.++++.|.. . .+.|.|+|+ |.+.. .+|. + +. ++.+ .+
T Consensus 271 ~F~~id~~~~~~~~~~~gl-~------------~~~P~v~i~----~~~~~-~ky~---~------~~~~~~~-----~~ 318 (504)
T 2b5e_A 271 NFVSIDARKFGRHAGNLNM-K------------EQFPLFAIH----DMTED-LKYG---L------PQLSEEA-----FD 318 (504)
T ss_dssp EEEEEEHHHHTTHHHHTTC-C------------SCSSEEEEE----ETTTT-EEEE---C------CCCCHHH-----HH
T ss_pred EEEEEehhhhHHHHHHcCC-c------------ccCCEEEEE----eCCcC-cccC---C------CCCccch-----hh
Confidence 9999999999999998833 2 145999988 44221 3554 2 21 1000 00
Q ss_pred ccCCC--CChhHHHHHHHHHhhcCCCCCCCcccCCCCCC
Q 006171 530 RYNGS--DEIPQIAKWVSEIIQDGDSKDLPFYRAKTPEL 566 (658)
Q Consensus 530 ~~~~~--~~~~~i~~~i~~~~~~g~~~~l~~~~~~~p~l 566 (658)
.+.++ .+.+.|..|+.+++. +.....+.++.+|+-
T Consensus 319 ~~~~~~~~~~~~l~~f~~~~~~--g~~~p~~~s~~~p~~ 355 (504)
T 2b5e_A 319 ELSDKIVLESKAIESLVKDFLK--GDASPIVKSQEIFEN 355 (504)
T ss_dssp TCCSCCCCCHHHHHHHHHHHHH--TCCCCCCCCCCCCCC
T ss_pred ccccccccCHHHHHHHHHHHHc--CCCChhhhcCCCCcc
Confidence 00000 245899999999999 455555566666653
No 8
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.5e-27 Score=248.61 Aligned_cols=229 Identities=16% Similarity=0.248 Sum_probs=183.8
Q ss_pred cceEEEecCCCCCccc-cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccc
Q 006171 135 VHAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (658)
Q Consensus 135 ~~~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~ 213 (658)
...|++||.++|++.+ +.+++++|+||||||++|+++.|.|+++|+.+++.+.++.|||+... ...+|++++
T Consensus 16 ~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~-~~~l~~~~~------ 88 (298)
T 3ed3_A 16 DPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNK-NKALCAKYD------ 88 (298)
T ss_dssp CTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTT-THHHHHHTT------
T ss_pred CCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCcc-CHHHHHhCC------
Confidence 4468999999999999 67889999999999999999999999999999988899999998432 245999999
Q ss_pred eeeeeEEEEcCCCCCC-------------CCCcccccCCCCHhHHHHHHHHhhccCC-cceeeccchhhhhhhhhcCCCc
Q 006171 214 RRGLPSLVAFPPGCKS-------------SDCMTRFEGELSVDAVTDWFATAILKLP-RIFYYTKESMGKNFLAKTGPHK 279 (658)
Q Consensus 214 V~~yPTl~~f~~g~~~-------------~~~~~~Y~G~rs~~~Lv~fv~k~v~~lP-~~~~it~~~~~~~Fl~~~~~~~ 279 (658)
|.++||+++|.+|... ......|.|.|++++|++|+.+. ++ .+..+++.+.++.|+... +.
T Consensus 89 I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~---~~~~v~~i~~~~~l~~~l~~~--~~ 163 (298)
T 3ed3_A 89 VNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSR---IRSYVKKFVRIDTLGSLLRKS--PK 163 (298)
T ss_dssp CCBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTT---CCCCEEECSCGGGHHHHHTSC--SS
T ss_pred CCccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHh---cccccEEcCCHHHHHHHHhcC--Cc
Confidence 8899999999988510 01257899999999999999988 43 333455544478888743 46
Q ss_pred EEEEEEeCCCCCCcHHHHHHHHhhccCceEEEEEecccccHhHH--hhcC-----C-------------CCCCEEEEEeC
Q 006171 280 VKVIFFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWW--NTFE-----V-------------ESAPAIVFLKD 339 (658)
Q Consensus 280 v~vl~f~~~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~--~~f~-----V-------------~~~Ptlvlfk~ 339 (658)
++|++|+.++ ...+.++.+|..|++.+.|+.+...+. ..+. ++|+ | ...|+|++|+.
T Consensus 164 ~~vi~fs~~~-~~~~~f~~~A~~~~~~~~F~~v~~~~~--a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~ 240 (298)
T 3ed3_A 164 LSVVLFSKQD-KISPVYKSIALDWLGKFDFYSISNKKL--KQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDA 240 (298)
T ss_dssp EEEEEEESSS-SCCHHHHHHHHHTBTTEEEEEEEGGGC--CCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEET
T ss_pred eEEEEEcCCC-cchHHHHHHHHHhhcCcEEEEEcchHh--hhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcC
Confidence 8888887554 467889999999999999999873321 1111 2333 2 56999999999
Q ss_pred CCCCeeeecC-CCChHHHHHHHH--hhccCCCccccCcchhh
Q 006171 340 PGVKPVVYYG-SFNNSRLSEVME--QNKLQELPQLRSVTSME 378 (658)
Q Consensus 340 ~~~~p~~y~g-~~~~~~L~~fi~--~~~~~~vP~lts~~~~~ 378 (658)
.+.+++.|.| .++.++|.+||. .+++|.+++|+....+.
T Consensus 241 ~~~~~~~y~g~~~~~~~i~~fi~~~~~~~p~~~~ls~~~~~~ 282 (298)
T 3ed3_A 241 DKDKFWEYEGNSINKNDISKFLRDTFSITPNEGPFSRRSEYI 282 (298)
T ss_dssp TTTEEEECCCSSCCHHHHHHHHHHHHTCCCSSSTTSHHHHHH
T ss_pred CCCceEEeccccCCHHHHHHHHHhhcCCCCCcCCCchHHHHH
Confidence 8889999995 689999999999 88999999999977543
No 9
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.93 E-value=1.5e-24 Score=255.68 Aligned_cols=287 Identities=15% Similarity=0.166 Sum_probs=220.8
Q ss_pred eEEEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceee
Q 006171 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~ 216 (658)
.|.++|.++|++. .+++++|.|||+||++|+++.|.|+++|+.+++.+.|+.|||+++. .+|++++ |++
T Consensus 441 ~v~~l~~~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~~---~~~~~~~------v~~ 509 (780)
T 3apo_A 441 HVTTLGPQNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHE---GLCNMYN------IQA 509 (780)
T ss_dssp CEEECCTTTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHHHHTT------CCS
T ss_pred CCEecCHHHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCCCH---HHHHHcC------CCc
Confidence 4899999999987 7889999999999999999999999999999988899999999554 4999999 889
Q ss_pred eeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHhhccCCcceeeccchhhhhhhhhcCCCc-EEEEEEeCC---CCCC
Q 006171 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHK-VKVIFFSKT---GERA 292 (658)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~-v~vl~f~~~---~~~~ 292 (658)
+||+++|.+|.. ..|.|.++.++|.+|+.+.+. |.+..++..+ +++++.....+. +.|.|+.+- ++..
T Consensus 510 ~Pt~~~~~~g~~-----~~~~g~~~~~~l~~fi~~~~~--~~v~~l~~~~-f~~~v~~~~~~~~~lv~F~ap~C~~c~~~ 581 (780)
T 3apo_A 510 YPTTVVFNQSSI-----HEYEGHHSAEQILEFIEDLRN--PSVVSLTPST-FNELVKQRKHDEVWMVDFYSPWSHPSQVL 581 (780)
T ss_dssp SSEEEEEETTEE-----EEECSCSCHHHHHHHHHHHHS--CSEEECCHHH-HHHHTTTCCTTCCEEEEEECTTCHHHHHH
T ss_pred CCeEEEEcCCce-----eeecCcccHHHHHHHHHhhcc--cceeecCccc-HHHHhhccCCCCeEEEEEECCCCHHHHHh
Confidence 999999977643 678999999999999998843 5555566544 666665433234 444455432 2234
Q ss_pred cHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCC---CeeeecC-CCChHHHHHHHHhhccCCC
Q 006171 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGV---KPVVYYG-SFNNSRLSEVMEQNKLQEL 368 (658)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~---~p~~y~g-~~~~~~L~~fi~~~~~~~v 368 (658)
.|.+..+|..|++.+.|+.+... ....++++|+|+++|+|++|+.+.. .+..|.| .++.+.|.+|+..+..+.+
T Consensus 582 ~p~~~~lA~~~~~~v~~~~vd~~--~~~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~~~v 659 (780)
T 3apo_A 582 MPEWKRMARTLTGLINVGSVDCG--QYHSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLPQAS 659 (780)
T ss_dssp HHHHHHHHHHHTTTSEEEEEETT--TTHHHHHHTTCCSSSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSCCCS
T ss_pred hHHHHHHHHHhhCCeEEEEEECc--chHHHHHHcCCCCCCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhccccc
Confidence 67788899999888888887532 2467999999999999999988654 4677999 8899999999999988888
Q ss_pred ccccCcchhhhcccccCCcCCCCCCcccEEEEEEcC-CChhHHHHHHHHHHHHHhhccccccccccccCCchHHHHhcCC
Q 006171 369 PQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGR-LSPELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAFRN 447 (658)
Q Consensus 369 P~lts~~~~~~~c~~~~~~~~~k~~~~~lcVi~~~~-~~~~~~~~~~~lr~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~ 447 (658)
..++..+..+.++.. ++ .++|.+.. --.....+...+.++++ .+++
T Consensus 660 ~~l~~~~~~~~~~~~------~~-----~v~v~F~a~wC~~C~~~~p~~~~la~----------------------~~~~ 706 (780)
T 3apo_A 660 IDLTPQTFNEKVLQG------KT-----HWVVDFYAPWSGPSQNFAPEFELLAR----------------------MIKG 706 (780)
T ss_dssp EEECHHHHHHHTTTC------SS-----CEEEEEECTTCHHHHHHHHHHHHHHH----------------------HHTT
T ss_pred ccCCHHHHHHHHhcC------CC-----eEEEEEECCCCHHHHHHHHHHHHHHH----------------------HhcC
Confidence 888887765545532 23 44555543 23345566667777766 5544
Q ss_pred CcEEEEEEeccchHHHHHHHcccCCcccccCCcCCCCCCCeEEEE
Q 006171 448 KRLTFAWLDGEAQDRYCSFYLFSETSFETCGARRDMSDVPRLFIV 492 (658)
Q Consensus 448 ~~v~F~wvd~~~q~~~~~~f~~~~~~~~~c~~~~~~~~~p~vvI~ 492 (658)
++.|++||.+...++++.|- +...|.++++
T Consensus 707 -~~~~~~vd~~~~~~~~~~~~--------------v~~~Pt~~~~ 736 (780)
T 3apo_A 707 -KVRAGKVDCQAYPQTCQKAG--------------IKAYPSVKLY 736 (780)
T ss_dssp -TCEEEEEETTTCHHHHHHTT--------------CCSSSEEEEE
T ss_pred -CceEEEEECCCCHHHHHhcC--------------CCcCCEEEEE
Confidence 59999999999999888762 2245999987
No 10
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.91 E-value=5.5e-24 Score=214.15 Aligned_cols=209 Identities=16% Similarity=0.248 Sum_probs=165.4
Q ss_pred ceEEEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc---cceeeeecccchhhhHHHhhCCCCccc
Q 006171 136 HAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI---ANTGMVELGDIRLATHLAERKPIGQIF 212 (658)
Q Consensus 136 ~~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~---~~vg~Vdc~e~~~~~~Lc~k~~i~k~f 212 (658)
..|..||.++|+..+.++++++|.|||+||++|+++.|.|+++++++++. +.++.|||++++ .+|++++
T Consensus 15 ~~v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~---~l~~~~~----- 86 (241)
T 3idv_A 15 NGVLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSAS---VLASRFD----- 86 (241)
T ss_dssp TTEEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCH---HHHHHTT-----
T ss_pred CCcEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCH---HHHHhcC-----
Confidence 35899999999999988999999999999999999999999999999876 799999999554 5999999
Q ss_pred ceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHhhccC----Cccee-eccchhhhhhhhhcCCCcEEEEEEeC
Q 006171 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKL----PRIFY-YTKESMGKNFLAKTGPHKVKVIFFSK 287 (658)
Q Consensus 213 ~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v~~l----P~~~~-it~~~~~~~Fl~~~~~~~v~vl~f~~ 287 (658)
|+++||+++|.+|.. ..|.|.++.+.|.+|+.+.+... |.... ++..+ ++.++.. +++.++.|..
T Consensus 87 -v~~~Pt~~~~~~g~~-----~~~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~v~f~a 156 (241)
T 3idv_A 87 -VSGYPTIKILKKGQA-----VDYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKEN-FDEVVND---ADIILVEFYA 156 (241)
T ss_dssp -CCSSSEEEEEETTEE-----EECCSCSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTT-HHHHHHH---CSEEEEEEEC
T ss_pred -CCcCCEEEEEcCCCc-----ccccCcccHHHHHHHHhhccCcccccccccceeccHHH-HHHhhcc---CCeEEEEEEC
Confidence 889999999988754 57999999999999998874321 11222 34444 5666643 2455665532
Q ss_pred ----CCCCCcHHHHHHHHhhccC---ceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHH
Q 006171 288 ----TGERASPFVRQISRNYWAY---ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVM 360 (658)
Q Consensus 288 ----~~~~~~~~~~~~A~~~~~~---~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi 360 (658)
.|....|.+..++..+.+. +.|+.+.... ..+++++|+|.++||+++|+++ +++.|.|..+.+.|.+|+
T Consensus 157 ~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~g--~~~~~~g~~~~~~l~~~l 232 (241)
T 3idv_A 157 PWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATA--ETDLAKRFDVSGYPTLKIFRKG--RPYDYNGPREKYGIVDYM 232 (241)
T ss_dssp TTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTT--CHHHHHHTTCCSSSEEEEEETT--EEEECCSCCSHHHHHHHH
T ss_pred CCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCC--CHHHHHHcCCcccCEEEEEECC--eEEEecCCCCHHHHHHHH
Confidence 2334567788888877654 7777775432 4789999999999999999975 456699999999999999
Q ss_pred HhhccC
Q 006171 361 EQNKLQ 366 (658)
Q Consensus 361 ~~~~~~ 366 (658)
+++.-+
T Consensus 233 ~~~~~~ 238 (241)
T 3idv_A 233 IEQSGA 238 (241)
T ss_dssp HHHTTC
T ss_pred HhhhCC
Confidence 986544
No 11
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.86 E-value=3.4e-21 Score=195.45 Aligned_cols=209 Identities=13% Similarity=0.197 Sum_probs=151.5
Q ss_pred eEEEecCCCCCccc-cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhc---ccceeeeecccchhhhHHHhhCCCCccc
Q 006171 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG---IANTGMVELGDIRLATHLAERKPIGQIF 212 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g---~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f 212 (658)
.|..||.++|+..+ +++++++|+|||+||++|+++.|.|+++++.+++ .+.+++|||+.+ ....+|++++
T Consensus 13 ~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~-~~~~l~~~~~----- 86 (244)
T 3q6o_A 13 PLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEE-TNSAVCRDFN----- 86 (244)
T ss_dssp SSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTST-TTHHHHHHTT-----
T ss_pred CceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCch-hhHHHHHHcC-----
Confidence 57899999999988 6779999999999999999999999999999987 579999999532 2345999999
Q ss_pred ceeeeeEEEEcCCCCCCC-CCcccccCCCCHhHHHHHHHHhhccC----Ccc----eeeccchhhhhhhhhcCCCcEEEE
Q 006171 213 FRRGLPSLVAFPPGCKSS-DCMTRFEGELSVDAVTDWFATAILKL----PRI----FYYTKESMGKNFLAKTGPHKVKVI 283 (658)
Q Consensus 213 ~V~~yPTl~~f~~g~~~~-~~~~~Y~G~rs~~~Lv~fv~k~v~~l----P~~----~~it~~~~~~~Fl~~~~~~~v~vl 283 (658)
|+++||+++|.+|.... .....|.| ++.+.|.+++.+.+... |.. ..++..+ ++.|+... ..++.++
T Consensus 87 -v~~~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~-l~~~~~~~-~~~~~al 162 (244)
T 3q6o_A 87 -IPGFPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEE-IDGFFARN-NEEYLAL 162 (244)
T ss_dssp -CCSSSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHH-HHTHHHHC-CCSEEEE
T ss_pred -CCccCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHH-HHHHhhcC-CCceEEE
Confidence 88999999999865410 11235566 79999999998874421 111 2233334 67777653 5567788
Q ss_pred EEeCCCCCCcHHHHHHHHhhccC--ceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCC-ChHHHHHHH
Q 006171 284 FFSKTGERASPFVRQISRNYWAY--ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF-NNSRLSEVM 360 (658)
Q Consensus 284 ~f~~~~~~~~~~~~~~A~~~~~~--~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~-~~~~L~~fi 360 (658)
+|.+.+ ....+.++..+... +.++.+. + ....++++|||+++|++++|..++ ++..+.... +.+.+..++
T Consensus 163 ~f~~~~---~~~~~~~~~d~~~~~~i~v~~~~--~-~~~~l~~~f~v~~~Pslvl~~~~g-~~~~~~~~~~~r~~~~~~l 235 (244)
T 3q6o_A 163 IFEXGG---SYLAREVALDLSQHKGVAVRRVL--N-TEANVVRKFGVTDFPSCYLLFRNG-SVSRVPVLMESRSFYTAYL 235 (244)
T ss_dssp EEECTT---CCHHHHHHHHTTTCTTEEEEEEE--T-TCHHHHHHHTCCCSSEEEEEETTS-CEEECCCSSSSHHHHHHHH
T ss_pred EEEECC---cchHHHHHHHhccCCceEEEEEe--C-chHHHHHHcCCCCCCeEEEEeCCC-CeEeeccccccHHHHHHHH
Confidence 888543 45667777766533 4444443 2 247899999999999999998765 444454333 455666666
Q ss_pred Hh
Q 006171 361 EQ 362 (658)
Q Consensus 361 ~~ 362 (658)
+.
T Consensus 236 ~~ 237 (244)
T 3q6o_A 236 QR 237 (244)
T ss_dssp HT
T ss_pred Hh
Confidence 54
No 12
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.81 E-value=2.2e-19 Score=201.54 Aligned_cols=210 Identities=14% Similarity=0.186 Sum_probs=152.7
Q ss_pred eEEEecCCCCCccc-cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhc---ccceeeeecccchhhhHHHhhCCCCccc
Q 006171 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG---IANTGMVELGDIRLATHLAERKPIGQIF 212 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g---~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f 212 (658)
.|..||.++|+..+ +++++++|.|||+||++|+++.|.|+++++++++ .+.|++|||+++ ....+|++++
T Consensus 13 ~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d-~~~~l~~~~~----- 86 (519)
T 3t58_A 13 PLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEE-TNSAVCREFN----- 86 (519)
T ss_dssp SSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSG-GGHHHHHHTT-----
T ss_pred CcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCcc-ccHHHHHHcC-----
Confidence 47899999999988 6789999999999999999999999999999988 579999999742 2346999999
Q ss_pred ceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHhhccC----Cc----ceeeccchhhhhhhhhcCCCcEEEEE
Q 006171 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKL----PR----IFYYTKESMGKNFLAKTGPHKVKVIF 284 (658)
Q Consensus 213 ~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v~~l----P~----~~~it~~~~~~~Fl~~~~~~~v~vl~ 284 (658)
|+++||+++|.+|...-.....+.|.++.+.|.+++.+.+... |. ...++..+ ++.|+... ...+++++
T Consensus 87 -V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~-l~~~l~~~-~~~~vall 163 (519)
T 3t58_A 87 -IAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLND-IDGFFTRN-KADYLALV 163 (519)
T ss_dssp -CCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHH-HTTGGGSC-CCSEEEEE
T ss_pred -CcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHH-HHHHhccC-CCCeEEEE
Confidence 8899999999975431112355678899999999998874421 11 12234444 67777653 45688888
Q ss_pred EeCCCCCCcHHHHHHHHhhccC--ceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCC-ChHHHHHHHH
Q 006171 285 FSKTGERASPFVRQISRNYWAY--ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF-NNSRLSEVME 361 (658)
Q Consensus 285 f~~~~~~~~~~~~~~A~~~~~~--~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~-~~~~L~~fi~ 361 (658)
|.+.+ .+..+.++..|... +.++.+. .....++++|||+++|++++|..++.. ..+.... ..+.+..+++
T Consensus 164 F~~~~---s~~~~~~~ldl~~~~~v~v~~v~---~~~~~l~~kfgV~~~Pslvl~~~nGk~-~~~~v~~~~r~~~~~~l~ 236 (519)
T 3t58_A 164 FERED---SYLGREVTLDLSQYHAVAVRRVL---NTESDLVNKFGVTDFPSCYLLLRNGSV-SRVPVLVESRSFYTSYLR 236 (519)
T ss_dssp EECTT---CCHHHHHHHHTTTCTTEEEEEEE---TTCHHHHHHHTCCCSSEEEEEETTSCE-EECCCSSCSHHHHHHHHT
T ss_pred ecCCc---hHHHHHHHHHhhccCCeeEEEec---CchHHHHHHcCCCCCCeEEEEeCCCce-eecccccccHHHHHHHHH
Confidence 88543 55677777777644 4454443 234689999999999999999987642 2232222 2344555655
Q ss_pred h
Q 006171 362 Q 362 (658)
Q Consensus 362 ~ 362 (658)
.
T Consensus 237 ~ 237 (519)
T 3t58_A 237 G 237 (519)
T ss_dssp T
T ss_pred H
Confidence 3
No 13
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.77 E-value=1.4e-18 Score=173.88 Aligned_cols=189 Identities=10% Similarity=0.046 Sum_probs=135.3
Q ss_pred CCCcEEEEEe-----ccCCCCCCCChHHHHHHHHHh--hcccceeeeecccchhhhHHHhhCCCCcccceeeeeEEEEcC
Q 006171 152 DSKPWLIQVY-----SDGSYLCGQFSGAWKTIAALL--EGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFP 224 (658)
Q Consensus 152 ~~~~~lV~FY-----apwC~~Ck~l~P~w~~~A~~l--~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl~~f~ 224 (658)
...+++|.|| +|||+||+++.|+|+++|+++ .+.+.+++|||++++ .||++++ |++||||++|+
T Consensus 19 ~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~---~l~~~~~------v~~~Ptl~~~~ 89 (229)
T 2ywm_A 19 FKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHK---EETEKYG------VDRVPTIVIEG 89 (229)
T ss_dssp CCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCH---HHHHHTT------CCBSSEEEEES
T ss_pred ccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccH---HHHHHcC------CCcCcEEEEEC
Confidence 4567777777 899999999999999999998 567799999999554 5999999 88999999998
Q ss_pred CCCCCCCCcccccCCCCHhHHHHHHHHhhccCCcceeeccchhhhhhhhhcCCCcEEEE-EEeCCC---CCCcHHHHHHH
Q 006171 225 PGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQIS 300 (658)
Q Consensus 225 ~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl-~f~~~~---~~~~~~~~~~A 300 (658)
++. ....|.|.++.+.+.+|+.+.+........++..+ ++..+. ....+.++ |+...| ....+.+..++
T Consensus 90 ~~~----~~~~~~G~~~~~~l~~~~~~~~~~~~~~~~l~~~~-~~~~~~--~~~~~~~v~F~a~wC~~C~~~~~~~~~~~ 162 (229)
T 2ywm_A 90 DKD----YGIRYIGLPAGLEFTTLINGIFHVSQRKPQLSEKT-LELLQV--VDIPIEIWVFVTTSCGYCPSAAVMAWDFA 162 (229)
T ss_dssp SSC----CCEEEESCCCTTHHHHHHHHHHHHHTTCCSCCHHH-HHHHTT--CCSCEEEEEEECTTCTTHHHHHHHHHHHH
T ss_pred CCc----ccceecCCccHHHHHHHHHHHHhccCCccCCCHHH-HHHHHh--cCCCeEEEEEECCCCcchHHHHHHHHHHH
Confidence 653 35789999999999999987632111122233333 344432 12334355 444322 12346666677
Q ss_pred HhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHhh
Q 006171 301 RNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 301 ~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~~ 363 (658)
..+ +.+.|+.+... ...+++++|+|.++||+++ ++ . ...|.|..+.+.|.+|++..
T Consensus 163 ~~~-~~v~~~~vd~~--~~~~l~~~~~v~~~Pt~~~--~G-~-~~~~~G~~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 163 LAN-DYITSKVIDAS--ENQDLAEQFQVVGVPKIVI--NK-G-VAEFVGAQPENAFLGYIMAV 218 (229)
T ss_dssp HHC-TTEEEEEEEGG--GCHHHHHHTTCCSSSEEEE--GG-G-TEEEESCCCHHHHHHHHHHH
T ss_pred HHC-CCeEEEEEECC--CCHHHHHHcCCcccCEEEE--CC-E-EEEeeCCCCHHHHHHHHHHH
Confidence 776 45666666533 2478999999999999988 33 2 34489999999999998764
No 14
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.76 E-value=2.9e-19 Score=162.40 Aligned_cols=106 Identities=15% Similarity=0.141 Sum_probs=92.7
Q ss_pred ceEEEecCCCCCccc-cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhh-----cccceeeeecccchhhhHHHhhCCCC
Q 006171 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE-----GIANTGMVELGDIRLATHLAERKPIG 209 (658)
Q Consensus 136 ~~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~-----g~~~vg~Vdc~e~~~~~~Lc~k~~i~ 209 (658)
+.|..||.++|++.+ +++++++|.||||||++|+++.|.|+++|+.+. +.+.+++|||++++ .+|++++
T Consensus 15 ~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~---~l~~~~~-- 89 (127)
T 3h79_A 15 SRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYP---DVIERMR-- 89 (127)
T ss_dssp CCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCH---HHHHHTT--
T ss_pred CceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccH---hHHHhcC--
Confidence 357999999999998 578999999999999999999999999999874 34689999999554 5999999
Q ss_pred cccceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 210 QIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 210 k~f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|+++||+++|.+|.. ..+..|.|.++.+.|.+|+.+.
T Consensus 90 ----v~~~Pt~~~~~~g~~--~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 90 ----VSGFPTMRYYTRIDK--QEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp ----CCSSSEEEEECSSCS--SSCEECCSCCCHHHHHHHHHHH
T ss_pred ----CccCCEEEEEeCCCC--CCceEecCCccHHHHHHHHHhc
Confidence 889999999998865 2336899999999999999764
No 15
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.76 E-value=2e-18 Score=184.76 Aligned_cols=210 Identities=14% Similarity=0.159 Sum_probs=154.8
Q ss_pred eEEEecCCCCCcccc-CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCccccee
Q 006171 137 AFNVVTSEDFPSIFH-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v~-~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~ 215 (658)
.|.++|.++|...+. ...+++|.||++||++|+++.|.|+++|+++++.+.++.|||++. ....+|+.+| |+
T Consensus 118 ~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~-~~~~~~~~fg------i~ 190 (361)
T 3uem_A 118 LVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHT-DNQRILEFFG------LK 190 (361)
T ss_dssp SEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSG-GGHHHHHHTT------CC
T ss_pred cceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChH-HHHHHHHHcC------CC
Confidence 478999999998884 456889999999999999999999999999999999999999932 1245999999 77
Q ss_pred e--eeEEEEcCCCCCCCCCccccc---CCCCHhHHHHHHHHhhcc----------CCc------ceeeccchhhhhhhhh
Q 006171 216 G--LPSLVAFPPGCKSSDCMTRFE---GELSVDAVTDWFATAILK----------LPR------IFYYTKESMGKNFLAK 274 (658)
Q Consensus 216 ~--yPTl~~f~~g~~~~~~~~~Y~---G~rs~~~Lv~fv~k~v~~----------lP~------~~~it~~~~~~~Fl~~ 274 (658)
+ +||+++|..+.. ...|. |.++.+.|.+|+.+.+.+ +|. +..++..+ ++.++.
T Consensus 191 ~~~~P~~~~~~~~~~----~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~-f~~~~~- 264 (361)
T 3uem_A 191 KEECPAVRLITLEEE----MTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKN-FEDVAF- 264 (361)
T ss_dssp TTTCSEEEEEECC------CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTT-HHHHHT-
T ss_pred ccCCccEEEEEcCCc----ccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCc-hhhhcc-
Confidence 7 999999987543 25565 899999999999886431 111 11133333 344442
Q ss_pred cCCCcEEEEEE-eCC---CCCCcHHHHHHHHhhccC--ceEEEEEecccccHhHHhhcCCCCCCEEEEEeCC-CCCeeee
Q 006171 275 TGPHKVKVIFF-SKT---GERASPFVRQISRNYWAY--ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP-GVKPVVY 347 (658)
Q Consensus 275 ~~~~~v~vl~f-~~~---~~~~~~~~~~~A~~~~~~--~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~-~~~p~~y 347 (658)
..+++.+|.| .+- |....|.+..++..|.+. +.++.+. ++.. .+++|+|.++||+++|+.+ +..+..|
T Consensus 265 -~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd---~~~~-~~~~~~v~~~Pt~~~~~~~~~~~~~~~ 339 (361)
T 3uem_A 265 -DEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMD---STAN-EVEAVKVHSFPTLKFFPASADRTVIDY 339 (361)
T ss_dssp -CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEE---TTTC-BCSSCCCCSSSEEEEECSSSSCCCEEC
T ss_pred -cCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEE---CCcc-chhhcCCcccCeEEEEECCCCcceeEe
Confidence 2345556655 332 233467788888888765 4555553 3222 2789999999999999766 4567789
Q ss_pred cCCCChHHHHHHHHhhc
Q 006171 348 YGSFNNSRLSEVMEQNK 364 (658)
Q Consensus 348 ~g~~~~~~L~~fi~~~~ 364 (658)
.|.++.+.|.+||+.+.
T Consensus 340 ~G~~~~~~l~~~l~~~~ 356 (361)
T 3uem_A 340 NGERTLDGFKKFLESGG 356 (361)
T ss_dssp CSCSSHHHHHHHHTTTS
T ss_pred cCCCCHHHHHHHHHhcC
Confidence 99999999999998864
No 16
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.76 E-value=2.3e-18 Score=171.73 Aligned_cols=195 Identities=14% Similarity=0.135 Sum_probs=137.8
Q ss_pred CCCcEEEEEecc-CCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeeeEEEEcCCCCCCC
Q 006171 152 DSKPWLIQVYSD-GSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSS 230 (658)
Q Consensus 152 ~~~~~lV~FYap-wC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~ 230 (658)
.+.+++|.||++ ||++|+++.|.|+++|+. .+.+.++.|||++. ....+|++++ |+++||+++|.+|..
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~v~~~~vd~~~~-~~~~~~~~~~------v~~~Pt~~~~~~g~~-- 90 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TDKLSYEIVDFDTP-EGKELAKRYR------IDRAPATTITQDGKD-- 90 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CTTEEEEEEETTSH-HHHHHHHHTT------CCSSSEEEEEETTBC--
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CCceEEEEEeCCCc-ccHHHHHHcC------CCcCceEEEEcCCce--
Confidence 356788999999 999999999999999964 56679999999951 0346999999 889999999987753
Q ss_pred CCcccccCCCCHhHHHHHHHHhhccCCcceeeccchhhhhhhhhcCCCcEEEE-EEeCCC---CCCcHHHHHHHHhhc--
Q 006171 231 DCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYW-- 304 (658)
Q Consensus 231 ~~~~~Y~G~rs~~~Lv~fv~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl-~f~~~~---~~~~~~~~~~A~~~~-- 304 (658)
....|.|.++.+.+.+|+...+........++... .+.... ....+.++ |+.+.| ....|.+..++..+.
T Consensus 91 -~~~~~~G~~~~~~l~~~l~~~l~~~~~~~~l~~~~-~~~~~~--~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~ 166 (226)
T 1a8l_A 91 -FGVRYFGLPAGHEFAAFLEDIVDVSREETNLMDET-KQAIRN--IDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKA 166 (226)
T ss_dssp -CSEEEESCCCTTHHHHHHHHHHHHHHTCCCCCHHH-HHHHTT--CCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHT
T ss_pred -eeEEEeccCcHHHHHHHHHHHHhhcCCCCCCCHHH-HHHHHh--cCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccc
Confidence 23679999999999999977532111111123222 333322 12345355 444322 223566777887775
Q ss_pred --cCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHhh
Q 006171 305 --AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 305 --~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~~ 363 (658)
+.+.|+.+... ....++++|+|.++||+++|+++. ....+.|..+.+.|.+|++..
T Consensus 167 ~~~~v~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 167 GKGKILGDMVEAI--EYPEWADQYNVMAVPKIVIQVNGE-DRVEFEGAYPEKMFLEKLLSA 224 (226)
T ss_dssp TCCCEEEEEEEGG--GCHHHHHHTTCCSSCEEEEEETTE-EEEEEESCCCHHHHHHHHHHH
T ss_pred cCCcEEEEEEEcc--cCHHHHHhCCCcccCeEEEEeCCc-eeEEEcCCCCHHHHHHHHHHh
Confidence 35666666533 247799999999999999998653 344588999999999998764
No 17
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.74 E-value=9.4e-19 Score=144.56 Aligned_cols=67 Identities=33% Similarity=0.541 Sum_probs=63.0
Q ss_pred ccCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHcCChhhhhcccccCch
Q 006171 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGID 102 (658)
Q Consensus 36 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Aye~L~d~~~R~~YD~~g~~ 102 (658)
..|||+||||+++|+.++||+|||+|+++||||+++++.+.|++|++||++|+||.+|+.||++|.+
T Consensus 7 ~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 7 ETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp CCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 5699999999999999999999999999999999988889999999999999999999999999963
No 18
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.73 E-value=3.1e-18 Score=142.95 Aligned_cols=69 Identities=26% Similarity=0.475 Sum_probs=64.5
Q ss_pred ccCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCC--ChHHHHHHHHHHHHHcCChhhhhcccccCchhh
Q 006171 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQ 104 (658)
Q Consensus 36 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~--~~~~~f~~i~~Aye~L~d~~~R~~YD~~g~~~~ 104 (658)
+.|||+||||+++|+.++||+|||+|+++||||+++ .+.+.|++|++||++|+||.+|+.||++|.++.
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 72 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGL 72 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccc
Confidence 469999999999999999999999999999999886 567889999999999999999999999998764
No 19
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.70 E-value=4.8e-18 Score=146.70 Aligned_cols=70 Identities=30% Similarity=0.572 Sum_probs=66.2
Q ss_pred ccCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHcCChhhhhcccccCchhhh
Q 006171 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQL 105 (658)
Q Consensus 36 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Aye~L~d~~~R~~YD~~g~~~~~ 105 (658)
..|||+||||+++|+.++||+|||+|+++||||+++...++|++|++||++|+||.+|+.||++|..+..
T Consensus 7 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~ 76 (92)
T 2o37_A 7 ETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQYGLEAAR 76 (92)
T ss_dssp CCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHH
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhh
Confidence 5699999999999999999999999999999999988889999999999999999999999999987643
No 20
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=6.3e-18 Score=141.42 Aligned_cols=69 Identities=28% Similarity=0.492 Sum_probs=64.2
Q ss_pred CccCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCC--ChHHHHHHHHHHHHHcCChhhhhcccccCchh
Q 006171 35 FPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (658)
Q Consensus 35 ~~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~--~~~~~f~~i~~Aye~L~d~~~R~~YD~~g~~~ 103 (658)
...|||+||||+++|+.++||+|||+|+++||||+++ .+.++|++|++||++|+||.+|+.||++|..+
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 3679999999999999999999999999999999986 46788999999999999999999999999765
No 21
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.70 E-value=8e-18 Score=141.11 Aligned_cols=69 Identities=26% Similarity=0.518 Sum_probs=63.8
Q ss_pred CccCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCC---ChHHHHHHHHHHHHHcCChhhhhcccccCchh
Q 006171 35 FPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI---PSTADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (658)
Q Consensus 35 ~~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~---~~~~~f~~i~~Aye~L~d~~~R~~YD~~g~~~ 103 (658)
...|||+||||+++|+.++||+|||+|+++||||+++ .+.++|++|++||++|+||.+|+.||.+|..+
T Consensus 5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 3679999999999999999999999999999999876 35688999999999999999999999999765
No 22
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.69 E-value=1.4e-17 Score=140.68 Aligned_cols=69 Identities=29% Similarity=0.480 Sum_probs=63.6
Q ss_pred CccCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC----hHHHHHHHHHHHHHcCChhhhhcccccCchh
Q 006171 35 FPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP----STADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (658)
Q Consensus 35 ~~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~~----~~~~f~~i~~Aye~L~d~~~R~~YD~~g~~~ 103 (658)
...|||+||||+++++.++||+|||+|+++||||+++. +.++|++|++||++|+||.+|+.||++|..+
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 79 (82)
T 2ej7_A 7 GMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGP 79 (82)
T ss_dssp SSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCS
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 35799999999999999999999999999999999874 3467999999999999999999999999765
No 23
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.69 E-value=1.1e-17 Score=143.18 Aligned_cols=68 Identities=29% Similarity=0.574 Sum_probs=63.9
Q ss_pred ccCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCC--ChHHHHHHHHHHHHHcCChhhhhcccccCchh
Q 006171 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (658)
Q Consensus 36 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~--~~~~~f~~i~~Aye~L~d~~~R~~YD~~g~~~ 103 (658)
..|||+||||+++|+.++||+|||+|+++||||+++ .+.++|++|++||++|+||.+|+.||.+|..+
T Consensus 16 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 16 DFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp SSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 679999999999999999999999999999999986 56788999999999999999999999999764
No 24
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.69 E-value=4.7e-17 Score=147.78 Aligned_cols=106 Identities=19% Similarity=0.355 Sum_probs=94.3
Q ss_pred eEEEecCCCCCccc-cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCccccee
Q 006171 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~ 215 (658)
.|..||.++|+..+ .++++++|.||++||++|+++.|.|+++++.+++.+.++.|||++++ .+|++++ |+
T Consensus 18 ~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~l~~~~~------v~ 88 (130)
T 2dml_A 18 DVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQ---SLGGQYG------VQ 88 (130)
T ss_dssp SSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCH---HHHHHHT------CC
T ss_pred CcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCH---HHHHHcC------CC
Confidence 57899999999866 77899999999999999999999999999999888899999999554 5999998 88
Q ss_pred eeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHhhc
Q 006171 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAIL 254 (658)
Q Consensus 216 ~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v~ 254 (658)
++||+++|.+|.. ....|.|.++.+.|.+|+.+.+.
T Consensus 89 ~~Pt~~~~~~~~~---~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 89 GFPTIKIFGANKN---KPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp SSSEEEEESSCTT---SCEECCSCCSHHHHHHHHHHHHH
T ss_pred ccCEEEEEeCCCC---eEEEeecCCCHHHHHHHHHHHHh
Confidence 9999999998764 24778999999999999988744
No 25
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.68 E-value=1.9e-15 Score=154.04 Aligned_cols=228 Identities=14% Similarity=0.128 Sum_probs=154.3
Q ss_pred CCcceeeccchhhhhhhhhcCCCcEEEEEEeCCCCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEE
Q 006171 256 LPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIV 335 (658)
Q Consensus 256 lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~~~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlv 335 (658)
+|.+..+++.+.++.|++.. ..++|.||.+.+......+..+|..+++.+.|+.+. +..++++|+++. |+|+
T Consensus 5 gP~v~~l~s~~~~~~~l~~~--~v~vvgff~~~~~~~~~~f~~~A~~lr~~~~F~~~~-----~~~v~~~~~~~~-p~i~ 76 (252)
T 2h8l_A 5 SPASVPLRTEEEFKKFISDK--DASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHTN-----VESLVNEYDDNG-EGII 76 (252)
T ss_dssp -CCEEECCSHHHHHHHHTSS--SCEEEEEESCTTSHHHHHHHHHHHHTTTTSCEEEEC-----CHHHHHHHCSSS-EEEE
T ss_pred CCCceeecCHHHHHHHhhcC--CeEEEEEECCCCChHHHHHHHHHHhcccCcEEEEEC-----hHHHHHHhCCCC-CcEE
Confidence 67777787666688888643 234555676543223456677899999999999874 456999999986 9999
Q ss_pred EEeC------CCCCeeee-cCCCChHHHHHHHHhhccCCCccccCcchhhhcccccCCcCCCCCCcccEEEEEEcCCC--
Q 006171 336 FLKD------PGVKPVVY-YGSFNNSRLSEVMEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRLS-- 406 (658)
Q Consensus 336 lfk~------~~~~p~~y-~g~~~~~~L~~fi~~~~~~~vP~lts~~~~~~~c~~~~~~~~~k~~~~~lcVi~~~~~~-- 406 (658)
+|++ .++.++.| .|.++.+.|.+||+.+.+|++++++..+..+ +.. . .+|++++....
T Consensus 77 ~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~-~~~-------~-----~~~v~~~~~~~~~ 143 (252)
T 2h8l_A 77 LFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDL-IQG-------K-----DLLIAYYDVDYEK 143 (252)
T ss_dssp EECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTTTHHH-HSS-------S-----SEEEEEECCBTTT
T ss_pred EEcchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeecccccHhh-hcC-------C-----CeEEEEeecchhh
Confidence 9996 34577889 9999999999999999999999999999876 331 1 37777664322
Q ss_pred --hhHHHHHHHHHHHHHhhccccccccccccCCchHHHHhcC--CCcEEEEEEeccchHHHHHHHcccCCcccccCCcCC
Q 006171 407 --PELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAFR--NKRLTFAWLDGEAQDRYCSFYLFSETSFETCGARRD 482 (658)
Q Consensus 407 --~~~~~~~~~lr~~a~~~~~~~~~~~~~~~~~~~~~A~~~~--~~~v~F~wvd~~~q~~~~~~f~~~~~~~~~c~~~~~ 482 (658)
...+..++.++++|+ +++ +..+.|+|+|++.+.+.++.|-... +
T Consensus 144 ~~~~~~~~~~~~~~vA~----------------------~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~----------~ 191 (252)
T 2h8l_A 144 NAKGSNYWRNRVMMVAK----------------------KFLDAGHKLNFAVASRKTFSHELSDFGLES----------T 191 (252)
T ss_dssp BHHHHHHHHHHHHHHHH----------------------HHHHTTCCCEEEEEETTTTHHHHGGGTCCC----------C
T ss_pred cchhHHHHHHHHHHHHH----------------------HccccCceEEEEEEchHHHHHHHHHcCCCC----------c
Confidence 123456777777777 444 3459999999998888888773310 0
Q ss_pred CCCCCeEEEEEeecCCccccceeccccCcccccccccccCccccchhccCCCCChhH--HHHHHHHHhhcCCCCCCCccc
Q 006171 483 MSDVPRLFIVRYKRNTTEDEAKIERKPRNIWDAMQEQEVDPASQLVVRYNGSDEIPQ--IAKWVSEIIQDGDSKDLPFYR 560 (658)
Q Consensus 483 ~~~~p~vvI~~~~~n~~~~~~k~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~i~~~~~~g~~~~l~~~~ 560 (658)
..+.|.|+|+ |... .||. + ++ .-+.+. |.+||.+++. +.....+++
T Consensus 192 ~~~~P~v~i~----~~~~--~ky~------~---~~---------------~~t~~~~~i~~F~~~~~~--Gkl~~~~kS 239 (252)
T 2h8l_A 192 AGEIPVVAIR----TAKG--EKFV------M---QE---------------EFSRDGKALERFLQDYFD--GNLKRYLKS 239 (252)
T ss_dssp SCSSCEEEEE----CTTS--CEEE------C---CS---------------CCCTTSHHHHHHHHHHHH--TCSCCCC--
T ss_pred cCCCCEEEEE----eCcC--cEec------C---Cc---------------ccCcchHHHHHHHHHHHC--CCccccccC
Confidence 1256999998 6544 3554 2 21 113356 9999999999 555677789
Q ss_pred CCCCCCCC
Q 006171 561 AKTPELVP 568 (658)
Q Consensus 561 ~~~p~l~~ 568 (658)
+++|+-++
T Consensus 240 e~iPe~~~ 247 (252)
T 2h8l_A 240 EPIPESND 247 (252)
T ss_dssp --------
T ss_pred CCCCCCCC
Confidence 99999843
No 26
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.67 E-value=1.1e-17 Score=148.07 Aligned_cols=99 Identities=15% Similarity=0.261 Sum_probs=83.5
Q ss_pred EEec-CCCCCcccc--CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCccccee
Q 006171 139 NVVT-SEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (658)
Q Consensus 139 ~~Lt-~~nF~~~v~--~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~ 215 (658)
..++ .++|++.+. ++++++|.||||||++|+.+.|.|+++++.+.+ ..+++|||++++ .||++++ |+
T Consensus 3 ~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~vd~d~~~---~l~~~~~------V~ 72 (105)
T 3zzx_A 3 YQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD-VVFLKVDVDECE---DIAQDNQ------IA 72 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEETTTCH---HHHHHTT------CC
T ss_pred EEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC-eEEEEEecccCH---HHHHHcC------CC
Confidence 3454 468998883 578999999999999999999999999998865 579999999654 5999999 88
Q ss_pred eeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 216 ~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
++||+++|++|.. ...+.| .+.+.|.+|+.++
T Consensus 73 ~~PT~~~~~~G~~----v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 73 CMPTFLFMKNGQK----LDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp BSSEEEEEETTEE----EEEEES-CCHHHHHHHHHHH
T ss_pred eecEEEEEECCEE----EEEEeC-cCHHHHHHHHHhc
Confidence 9999999998864 456778 6899999999764
No 27
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=1.9e-17 Score=141.71 Aligned_cols=69 Identities=32% Similarity=0.512 Sum_probs=64.3
Q ss_pred ccCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC--hHHHHHHHHHHHHHcCChhhhhcccccCchhh
Q 006171 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP--STADFLKIQYAYELLTDPLWKRNYDVYGIDEQ 104 (658)
Q Consensus 36 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~~--~~~~f~~i~~Aye~L~d~~~R~~YD~~g~~~~ 104 (658)
..|||+||||+++|+.++||+|||+|+++||||+++. +.++|++|++||++|+||.+|+.||.+|..+.
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 76 (88)
T 2ctr_A 6 SGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAF 76 (88)
T ss_dssp CCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHH
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 5799999999999999999999999999999999873 56789999999999999999999999997764
No 28
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.66 E-value=5.8e-15 Score=150.47 Aligned_cols=228 Identities=13% Similarity=0.080 Sum_probs=154.9
Q ss_pred cCCcceeeccchhhhhhhhh-cCCCcEEEEEEeCCCCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCE
Q 006171 255 KLPRIFYYTKESMGKNFLAK-TGPHKVKVIFFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPA 333 (658)
Q Consensus 255 ~lP~~~~it~~~~~~~Fl~~-~~~~~v~vl~f~~~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Pt 333 (658)
.+|.+..+++.+.++.|++. .. .++|.||.+.+......+..+|..+++.+.|+.+. +.+++++|+++. |+
T Consensus 4 ~gP~v~~l~s~~~~~~~~~~~~~--v~vVgff~~~~~~~~~~F~~~A~~lr~~~~F~~t~-----~~~v~~~~~v~~-p~ 75 (250)
T 3ec3_A 4 GSPPSKEILTLKQVQEFLKDGDD--VVILGVFQGVGDPGYLQYQDAANTLREDYKFHHTF-----STEIAKFLKVSL-GK 75 (250)
T ss_dssp -CCSSEECCCHHHHHHHHHHCSS--CEEEEECSCTTCHHHHHHHHHHHHHTTTCCEEEEC-----CHHHHHHHTCCS-SE
T ss_pred CCCCceecCCHHHHHHHHhcCCC--eEEEEEEcCCCchHHHHHHHHHHhhhcCcEEEEEC-----cHHHHHHcCCCC-Ce
Confidence 36877777775557888875 32 34444666544334556677899999999999873 456889999986 99
Q ss_pred EEEEeC------CCCCeeeec--CCCChHHHHHHHHhhccCCCccccCcchhhhcccccCCcCCCCCCcccEEEEEEcCC
Q 006171 334 IVFLKD------PGVKPVVYY--GSFNNSRLSEVMEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRL 405 (658)
Q Consensus 334 lvlfk~------~~~~p~~y~--g~~~~~~L~~fi~~~~~~~vP~lts~~~~~~~c~~~~~~~~~k~~~~~lcVi~~~~~ 405 (658)
|++|++ .++.++.|. |.++.+.|.+||+.+.+|++++++..|..+. .. ++ .+|++++..+
T Consensus 76 ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~-~~-------~~----~l~~~~~~~d 143 (250)
T 3ec3_A 76 LVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTSNDAKR-YS-------KR----PLVVVYYSVD 143 (250)
T ss_dssp EEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECTTTHHHH-SC-------SS----SEEEEEECCC
T ss_pred EEEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCccchhhh-hc-------cC----ccEEEEEecc
Confidence 999996 345677898 4789999999999999999999999997652 21 12 4777766422
Q ss_pred -----ChhHHHHHHHHHHHHHhhccccccccccccCCchHHHHhcCCCcEEEEEEeccchHHHHHHHcccCCcccccCCc
Q 006171 406 -----SPELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAFRNKRLTFAWLDGEAQDRYCSFYLFSETSFETCGAR 480 (658)
Q Consensus 406 -----~~~~~~~~~~lr~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~~v~F~wvd~~~q~~~~~~f~~~~~~~~~c~~~ 480 (658)
.+..+.+++.++.+|+ .|+ ++.|+|+|++...+.++.|-....
T Consensus 144 ~~~~~~~~~~~~~~~~~~vAk----------------------~~k--ki~F~~~d~~~~~~~l~~fgl~~~-------- 191 (250)
T 3ec3_A 144 FSFDYRTATQFWRNKVLEVAK----------------------DFP--EYTFAIADEEDYATEVKDLGLSES-------- 191 (250)
T ss_dssp CSTTTHHHHHHHHHHHHHHHT----------------------TCT--TSEEEEEETTTTHHHHHHTTCSSC--------
T ss_pred cccccchhHHHHHHHHHHHHH----------------------hhc--ceeEEEEcHHHHHHHHHHcCCCcc--------
Confidence 2234556777776666 787 599999999988888887733211
Q ss_pred CCCCCCCeEEEEEeecCCccccceeccccCcccccccccccCccccchhccCCCCChhHHHHHHHHHhhcCCCCCCCccc
Q 006171 481 RDMSDVPRLFIVRYKRNTTEDEAKIERKPRNIWDAMQEQEVDPASQLVVRYNGSDEIPQIAKWVSEIIQDGDSKDLPFYR 560 (658)
Q Consensus 481 ~~~~~~p~vvI~~~~~n~~~~~~k~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~g~~~~l~~~~ 560 (658)
...|.++++ |... .||. + +.+ .-+.+.|.+|+.+++. +.....+++
T Consensus 192 ---~~~p~~~~~----~~~~--~ky~------~---~~~--------------~~t~~~i~~Fv~~~~~--Gkl~p~~kS 237 (250)
T 3ec3_A 192 ---GGDVNAAIL----DESG--KKFA------M---EPE--------------EFDSDALREFVMAFKK--GKLKPVIKS 237 (250)
T ss_dssp ---SCSCEEEEE----CTTS--CEEE------C---CCC--------------SCCHHHHHHHHHHHHT--TCCCCCC--
T ss_pred ---CCCcEEEEE----cCCC--ceec------C---Ccc--------------cCCHHHHHHHHHHHHC--CCccceeec
Confidence 012688887 6554 4665 2 321 1256899999999999 677888899
Q ss_pred CCCCCCCC
Q 006171 561 AKTPELVP 568 (658)
Q Consensus 561 ~~~p~l~~ 568 (658)
+++|+-++
T Consensus 238 epiPe~~~ 245 (250)
T 3ec3_A 238 QPVPKNNK 245 (250)
T ss_dssp --------
T ss_pred CCCCCCCC
Confidence 99999843
No 29
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.66 E-value=2.5e-17 Score=144.02 Aligned_cols=68 Identities=26% Similarity=0.510 Sum_probs=62.0
Q ss_pred cCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC----hHHHHHHHHHHHHHcCChhhhhcccccCchhh
Q 006171 37 PSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP----STADFLKIQYAYELLTDPLWKRNYDVYGIDEQ 104 (658)
Q Consensus 37 ~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~~----~~~~f~~i~~Aye~L~d~~~R~~YD~~g~~~~ 104 (658)
.|||+||||+++|+.++||+|||+|+++||||+++. +.+.|++|++||++|+||.+|+.||.+|..+.
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~ 73 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGL 73 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC--
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 489999999999999999999999999999999874 45789999999999999999999999987664
No 30
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.66 E-value=3.7e-17 Score=144.18 Aligned_cols=69 Identities=28% Similarity=0.521 Sum_probs=63.9
Q ss_pred ccCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCC---ChHHHHHHHHHHHHHcCChhhhhcccccCchhh
Q 006171 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI---PSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQ 104 (658)
Q Consensus 36 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~---~~~~~f~~i~~Aye~L~d~~~R~~YD~~g~~~~ 104 (658)
..|||+||||+++|+.++||+|||+|+++||||+++ .+.++|++|++||++|+||.+|+.||++|..+.
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 73 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAF 73 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhh
Confidence 369999999999999999999999999999999876 356789999999999999999999999998764
No 31
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.66 E-value=6.9e-17 Score=143.81 Aligned_cols=70 Identities=26% Similarity=0.433 Sum_probs=64.9
Q ss_pred ccCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC---hHHHHHHHHHHHHHcCChhhhhcccccCchhhh
Q 006171 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP---STADFLKIQYAYELLTDPLWKRNYDVYGIDEQL 105 (658)
Q Consensus 36 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~~---~~~~f~~i~~Aye~L~d~~~R~~YD~~g~~~~~ 105 (658)
..|||+||||+++|+.++||+|||+|+++||||+++. +.++|++|++||++|+||.+|+.||.+|..+..
T Consensus 16 ~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 16 GESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp SCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 6799999999999999999999999999999999874 467899999999999999999999999987643
No 32
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=4.1e-17 Score=146.01 Aligned_cols=69 Identities=25% Similarity=0.323 Sum_probs=64.2
Q ss_pred ccCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC---hHHHHHHHHHHHHHcCChhhhhcccccCchhh
Q 006171 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP---STADFLKIQYAYELLTDPLWKRNYDVYGIDEQ 104 (658)
Q Consensus 36 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~~---~~~~f~~i~~Aye~L~d~~~R~~YD~~g~~~~ 104 (658)
..|||+||||+++|+.++||+|||+|+++||||+++. +.++|++|++||++|+||.+|+.||++|..+.
T Consensus 19 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~ 90 (112)
T 2ctq_A 19 TEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQM 90 (112)
T ss_dssp CCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhcc
Confidence 5799999999999999999999999999999998863 57889999999999999999999999987654
No 33
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.65 E-value=1.4e-16 Score=142.54 Aligned_cols=102 Identities=20% Similarity=0.393 Sum_probs=89.4
Q ss_pred eEEEecCCCCCccc-cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhc-----ccceeeeecccchhhhHHHhhCCCCc
Q 006171 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-----IANTGMVELGDIRLATHLAERKPIGQ 210 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g-----~~~vg~Vdc~e~~~~~~Lc~k~~i~k 210 (658)
.|..|+.++|+..+ .++++++|.|||+||++|+++.|.|+++++++++ .+.++.|||+++. +++ +
T Consensus 8 ~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~----~~~--~--- 78 (121)
T 2djj_A 8 PVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND----VPD--E--- 78 (121)
T ss_dssp SSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC----CSS--C---
T ss_pred CeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc----ccc--c---
Confidence 57889999999997 7889999999999999999999999999999987 5799999999664 554 5
Q ss_pred ccceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 211 IFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 211 ~f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|+++||+++|.+|.. .....|.|.++.+.|.+|+.+.
T Consensus 79 ---v~~~Pt~~~~~~~~~--~~~~~~~G~~~~~~l~~~i~~~ 115 (121)
T 2djj_A 79 ---IQGFPTIKLYPAGAK--GQPVTYSGSRTVEDLIKFIAEN 115 (121)
T ss_dssp ---CSSSSEEEEECSSCT--TSCCCCCCCSCHHHHHHHHHHT
T ss_pred ---cCcCCeEEEEeCcCC--CCceEecCCCCHHHHHHHHHhc
Confidence 889999999998753 1246789999999999999887
No 34
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.64 E-value=1.2e-16 Score=154.23 Aligned_cols=107 Identities=15% Similarity=0.310 Sum_probs=91.1
Q ss_pred eEEEecCCCCCcccc--CCCcEEEEEec-------cCCCCCCCChHHHHHHHHHhh-----cccceeeeecccchhhhHH
Q 006171 137 AFNVVTSEDFPSIFH--DSKPWLIQVYS-------DGSYLCGQFSGAWKTIAALLE-----GIANTGMVELGDIRLATHL 202 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v~--~~~~~lV~FYa-------pwC~~Ck~l~P~w~~~A~~l~-----g~~~vg~Vdc~e~~~~~~L 202 (658)
.|+.||++||+++|. .+.+++|.|+| +||++|+.++|+|+++|+++. +.+.|++||+++++ .+
T Consensus 19 ~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~---~l 95 (178)
T 3ga4_A 19 GVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVP---QL 95 (178)
T ss_dssp SEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCH---HH
T ss_pred CCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCH---HH
Confidence 579999999999884 36689999999 499999999999999999998 77899999999665 49
Q ss_pred HhhCCCCcccceeeeeEEEEcCCCCCCC--------CCcccc---cC-CCCHhHHHHHHHHh
Q 006171 203 AERKPIGQIFFRRGLPSLVAFPPGCKSS--------DCMTRF---EG-ELSVDAVTDWFATA 252 (658)
Q Consensus 203 c~k~~i~k~f~V~~yPTl~~f~~g~~~~--------~~~~~Y---~G-~rs~~~Lv~fv~k~ 252 (658)
+++++ |+++|||++|++|.... .....| .| .++++.|.+|+.+.
T Consensus 96 a~~~~------I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~ 151 (178)
T 3ga4_A 96 VKDLK------LQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKI 151 (178)
T ss_dssp HHHTT------CCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHH
T ss_pred HHHcC------CCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHh
Confidence 99999 99999999999986421 012345 35 89999999999987
No 35
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.64 E-value=1.1e-16 Score=142.01 Aligned_cols=101 Identities=9% Similarity=0.076 Sum_probs=91.1
Q ss_pred EEEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeee
Q 006171 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (658)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~y 217 (658)
|+.||.++|++.+ ++++++|.||++||++|+.+.|.|+++++++++.+.++.|||++++ .+|++++ |.++
T Consensus 3 v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~---~l~~~~~------v~~~ 72 (112)
T 2voc_A 3 IVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQ---ETAGKYG------VMSI 72 (112)
T ss_dssp CEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCC---SHHHHTT------CCSB
T ss_pred eEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCH---HHHHHcC------CCcc
Confidence 5789999999999 8899999999999999999999999999999877899999999654 4999999 8899
Q ss_pred eEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
||+++|++|.. ...|.|.++.+.|.+|+.+.
T Consensus 73 Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 103 (112)
T 2voc_A 73 PTLLVLKDGEV----VETSVGFKPKEALQELVNKH 103 (112)
T ss_dssp SEEEEEETTEE----EEEEESCCCHHHHHHHHHTT
T ss_pred cEEEEEeCCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 99999977753 46789999999999999887
No 36
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.64 E-value=4.6e-17 Score=140.58 Aligned_cols=69 Identities=29% Similarity=0.518 Sum_probs=63.7
Q ss_pred ccCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC----hHHHHHHHHHHHHHcCChhhhhcccccCchhh
Q 006171 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP----STADFLKIQYAYELLTDPLWKRNYDVYGIDEQ 104 (658)
Q Consensus 36 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~~----~~~~f~~i~~Aye~L~d~~~R~~YD~~g~~~~ 104 (658)
..|||+||||+++++.++||+|||+|+++||||+++. +.++|++|++||++|+||.+|+.||++|..+.
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 80 (92)
T 2dmx_A 8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSW 80 (92)
T ss_dssp CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSS
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 5699999999999999999999999999999999874 35689999999999999999999999987653
No 37
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.64 E-value=6e-17 Score=147.32 Aligned_cols=107 Identities=17% Similarity=0.305 Sum_probs=94.4
Q ss_pred cceEEEecCCCCCccc-cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhh----cccceeeeecccchhhhHHHhhCCCC
Q 006171 135 VHAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE----GIANTGMVELGDIRLATHLAERKPIG 209 (658)
Q Consensus 135 ~~~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~----g~~~vg~Vdc~e~~~~~~Lc~k~~i~ 209 (658)
.+.|..||.++|+..+ .++++++|.||++||++|+++.|.|+++++.++ +.+.++.|||++++ .+|++++
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~l~~~~~-- 80 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQ---VLASRYG-- 80 (133)
T ss_dssp CCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCC---HHHHHHT--
T ss_pred CCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCH---HHHHhCC--
Confidence 3457899999999887 678999999999999999999999999999997 66799999999554 4999998
Q ss_pred cccceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHhhc
Q 006171 210 QIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAIL 254 (658)
Q Consensus 210 k~f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v~ 254 (658)
|+++||+++|.+|.. ...|.|.++.+.|.+|+.+.+.
T Consensus 81 ----v~~~Pt~~~~~~g~~----~~~~~G~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 81 ----IRGFPTIKIFQKGES----PVDYDGGRTRSDIVSRALDLFS 117 (133)
T ss_dssp ----CCSSSEEEEEETTEE----EEEECSCCSHHHHHHHHHHHHH
T ss_pred ----CCeeCeEEEEeCCCc----eEEecCCCCHHHHHHHHHHHhh
Confidence 889999999998753 5778999999999999988743
No 38
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.63 E-value=1.6e-16 Score=146.14 Aligned_cols=103 Identities=17% Similarity=0.294 Sum_probs=93.0
Q ss_pred eEEEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc---cceeeeecccchhhhHHHhhCCCCcccc
Q 006171 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI---ANTGMVELGDIRLATHLAERKPIGQIFF 213 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~---~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~ 213 (658)
.|..|+.++|+..+.+++++||.||++||++|+++.|.|+++++.+.+. +.++.|||+++. .+|++++
T Consensus 18 ~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~---~~~~~~~------ 88 (140)
T 2dj1_A 18 GVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSAS---MLASKFD------ 88 (140)
T ss_dssp TEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCH---HHHHHTT------
T ss_pred CCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccH---HHHHHCC------
Confidence 5889999999998888899999999999999999999999999999875 699999999554 5999999
Q ss_pred eeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHhh
Q 006171 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (658)
Q Consensus 214 V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v 253 (658)
|.++||+++|.+|. ...|.|.++.+.|.+|+.+.+
T Consensus 89 v~~~Pt~~~~~~G~-----~~~~~g~~~~~~l~~~l~~~~ 123 (140)
T 2dj1_A 89 VSGYPTIKILKKGQ-----AVDYDGSRTQEEIVAKVREVS 123 (140)
T ss_dssp CCSSSEEEEEETTE-----EEECCSCCCHHHHHHHHHHHH
T ss_pred CCccCeEEEEECCc-----EEEcCCCCCHHHHHHHHHHhc
Confidence 88999999998774 368899999999999999874
No 39
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.63 E-value=6e-17 Score=142.41 Aligned_cols=103 Identities=16% Similarity=0.304 Sum_probs=93.1
Q ss_pred eEEEecCCCCCccc-cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCccccee
Q 006171 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~ 215 (658)
.|..+|.++|++.+ .++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++ .+|++++ |+
T Consensus 5 ~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~---~l~~~~~------v~ 75 (111)
T 3gnj_A 5 SLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEK---TLFQRFS------LK 75 (111)
T ss_dssp CSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCH---HHHHHTT------CC
T ss_pred cceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcCh---hHHHhcC------CC
Confidence 46889999999999 78899999999999999999999999999999887899999999554 5999999 88
Q ss_pred eeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 216 ~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
++||+++|.+|.. ...|.|.++.+.|.+|+.+.
T Consensus 76 ~~Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 76 GVPQILYFKDGEY----KGKMAGDVEDDEVEQMIADV 108 (111)
T ss_dssp SSCEEEEEETTEE----EEEEESSCCHHHHHHHHHHH
T ss_pred cCCEEEEEECCEE----EEEEeccCCHHHHHHHHHHH
Confidence 9999999988753 46789999999999999876
No 40
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=1.6e-16 Score=139.03 Aligned_cols=67 Identities=24% Similarity=0.377 Sum_probs=61.7
Q ss_pred ccCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC---hHHHHHHHHHHHHHcCChhhhhcccccCch
Q 006171 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP---STADFLKIQYAYELLTDPLWKRNYDVYGID 102 (658)
Q Consensus 36 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~~---~~~~f~~i~~Aye~L~d~~~R~~YD~~g~~ 102 (658)
..|||+||||+++|+.++||+|||+|+++||||+++. +.++|++|++||++|+||.+|+.||++...
T Consensus 16 ~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 85 (99)
T 2yua_A 16 RTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLS 85 (99)
T ss_dssp SSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCC
T ss_pred ccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccc
Confidence 6799999999999999999999999999999999863 567899999999999999999999986543
No 41
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.63 E-value=2.2e-16 Score=143.85 Aligned_cols=106 Identities=17% Similarity=0.274 Sum_probs=90.5
Q ss_pred ceEEEecCCCCCcccc-CCCcEEEEEeccCCCCCCCChHHHHHHHHHhh--cccceeeeecccchhhhHHHhhCCCCccc
Q 006171 136 HAFNVVTSEDFPSIFH-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE--GIANTGMVELGDIRLATHLAERKPIGQIF 212 (658)
Q Consensus 136 ~~V~~Lt~~nF~~~v~-~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~--g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f 212 (658)
..|..|+.++|+..+. ++++++|.|||+||++|+++.|.|+++++.++ +.+.++.|||+++. .+|++++
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~----- 78 (133)
T 2dj3_A 7 GPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATAND---ITNDQYK----- 78 (133)
T ss_dssp CSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSC---CCCSSCC-----
T ss_pred CceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCH---HHHhhcC-----
Confidence 3578999999999984 68999999999999999999999999999997 45699999999654 3777787
Q ss_pred ceeeeeEEEEcCCCCCCCCCccccc-CCCCHhHHHHHHHHh
Q 006171 213 FRRGLPSLVAFPPGCKSSDCMTRFE-GELSVDAVTDWFATA 252 (658)
Q Consensus 213 ~V~~yPTl~~f~~g~~~~~~~~~Y~-G~rs~~~Lv~fv~k~ 252 (658)
|+++||+++|.+|.. .....|. |.++.+.|.+|+.+.
T Consensus 79 -v~~~Pt~~~~~~g~~--~~~~~~~gg~~~~~~l~~~l~~~ 116 (133)
T 2dj3_A 79 -VEGFPTIYFAPSGDK--KNPIKFEGGNRDLEHLSKFIDEH 116 (133)
T ss_dssp -CSSSSEEEEECTTCT--TSCEECCSSCCSTTHHHHHHHHH
T ss_pred -CCcCCEEEEEeCCCc--ccceEecCCCcCHHHHHHHHHHh
Confidence 889999999988764 1234577 569999999999988
No 42
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.62 E-value=2.6e-16 Score=139.82 Aligned_cols=105 Identities=17% Similarity=0.304 Sum_probs=91.8
Q ss_pred eEEEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhc---ccceeeeecccchhhhHHHhhCCCCcccc
Q 006171 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG---IANTGMVELGDIRLATHLAERKPIGQIFF 213 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g---~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~ 213 (658)
.|..+|.++|+..+.++++++|.||++||++|+++.|.|+++++.+++ .+.++.|||++++ .+|++++
T Consensus 8 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~---~~~~~~~------ 78 (120)
T 1mek_A 8 HVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEES---DLAQQYG------ 78 (120)
T ss_dssp TEEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCC---SSHHHHT------
T ss_pred CcEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCH---HHHHHCC------
Confidence 578999999998888889999999999999999999999999999874 4689999999554 4889988
Q ss_pred eeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 214 V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|+++||+++|.+|.. .....|.|.++.+.|.+|+.+.
T Consensus 79 v~~~Pt~~~~~~g~~--~~~~~~~g~~~~~~l~~~l~~~ 115 (120)
T 1mek_A 79 VRGYPTIKFFRNGDT--ASPKEYTAGREADDIVNWLKKR 115 (120)
T ss_dssp CCSSSEEEEEESSCS--SSCEECCCCSSHHHHHHHHHTT
T ss_pred CCcccEEEEEeCCCc--CCcccccCccCHHHHHHHHHhc
Confidence 889999999988753 1126789999999999999876
No 43
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.62 E-value=6e-17 Score=142.28 Aligned_cols=104 Identities=16% Similarity=0.284 Sum_probs=90.7
Q ss_pred cceEEEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhc---ccceeeeecccchhhhHHHhhCCCCcc
Q 006171 135 VHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG---IANTGMVELGDIRLATHLAERKPIGQI 211 (658)
Q Consensus 135 ~~~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g---~~~vg~Vdc~e~~~~~~Lc~k~~i~k~ 211 (658)
.+.|..||.++|++.+. +++++|.||++||++|+++.|.|+++++.+.. .+.++.|||++++ .+|++++
T Consensus 4 ~~~v~~l~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~l~~~~~---- 75 (111)
T 3uvt_A 4 GSTVLALTENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAER---NICSKYS---- 75 (111)
T ss_dssp -CCSEECCTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCH---HHHHHTT----
T ss_pred CCcceEcChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccH---hHHHhcC----
Confidence 34578999999999997 77999999999999999999999999998753 4589999999554 5999999
Q ss_pred cceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 212 f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|+++||+++|.+|.. ...|.|.++.+.|.+|+.++
T Consensus 76 --v~~~Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 76 --VRGYPTLLLFRGGKK----VSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp --CCSSSEEEEEETTEE----EEEECSCCSHHHHHHHHHHH
T ss_pred --CCcccEEEEEeCCcE----EEeccCCcCHHHHHHHHHhc
Confidence 889999999988854 46889999999999999865
No 44
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.62 E-value=2.2e-16 Score=138.31 Aligned_cols=103 Identities=17% Similarity=0.254 Sum_probs=91.3
Q ss_pred eEEEecCCCCCccc-cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCccccee
Q 006171 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~ 215 (658)
.|..+|.++|+..+ .++++++|.||++||++|+.+.|.++++++.+.+.+.++.|||++++ .+|++++ |.
T Consensus 3 ~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~------v~ 73 (108)
T 2trx_A 3 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP---GTAPKYG------IR 73 (108)
T ss_dssp TEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCT---THHHHTT------CC
T ss_pred cceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCH---HHHHHcC------Cc
Confidence 47899999999776 77899999999999999999999999999999877899999999654 4899998 88
Q ss_pred eeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 216 ~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
++||+++|++|.. ...|.|.++.+.|.+|+.+.
T Consensus 74 ~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 106 (108)
T 2trx_A 74 GIPTLLLFKNGEV----AATKVGALSKGQLKEFLDAN 106 (108)
T ss_dssp SSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred ccCEEEEEeCCEE----EEEEecCCCHHHHHHHHHHh
Confidence 9999999987753 45688999999999999775
No 45
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.62 E-value=8.3e-17 Score=139.46 Aligned_cols=66 Identities=21% Similarity=0.446 Sum_probs=60.8
Q ss_pred ccCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC---------hHHHHHHHHHHHHHcCChhhhhcccccCc
Q 006171 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP---------STADFLKIQYAYELLTDPLWKRNYDVYGI 101 (658)
Q Consensus 36 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~~---------~~~~f~~i~~Aye~L~d~~~R~~YD~~g~ 101 (658)
..|||+||||+++|+.++||+|||+|+++||||+++. +.++|++|++||++|+||.+|+.||.+..
T Consensus 15 ~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 15 KKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp CSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 6799999999999999999999999999999999762 45779999999999999999999998754
No 46
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.61 E-value=7e-16 Score=159.62 Aligned_cols=103 Identities=17% Similarity=0.274 Sum_probs=93.1
Q ss_pred eEEEecCCCCCcccc--CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccce
Q 006171 137 AFNVVTSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v~--~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V 214 (658)
.|..+|.++|++.+. .+++++|.||+|||++|+.+.|.|+++++++++.+.|++|||++++ .+|++++ |
T Consensus 8 ~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~------v 78 (287)
T 3qou_A 8 NIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQ---MIAAQFG------L 78 (287)
T ss_dssp TEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCH---HHHHTTT------C
T ss_pred ccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCH---HHHHHcC------C
Confidence 478999999999884 3899999999999999999999999999999988899999999654 5999999 8
Q ss_pred eeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 215 ~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
+++||+++|.+|.. ...|.|.++.+.+.+|+...
T Consensus 79 ~~~Pt~~~~~~G~~----~~~~~g~~~~~~l~~~l~~~ 112 (287)
T 3qou_A 79 RAIPTVYLFQNGQP----VDGFQGPQPEEAIRALLDXV 112 (287)
T ss_dssp CSSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CCCCeEEEEECCEE----EEEeeCCCCHHHHHHHHHHH
Confidence 89999999988753 46789999999999999988
No 47
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.61 E-value=1.5e-16 Score=138.95 Aligned_cols=103 Identities=17% Similarity=0.323 Sum_probs=93.0
Q ss_pred eEEEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceee
Q 006171 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~ 216 (658)
.|..+|.++|+..+.++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++ .+|++++ |.+
T Consensus 5 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~------i~~ 75 (109)
T 3tco_A 5 VTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQ---KIADKYS------VLN 75 (109)
T ss_dssp CCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCH---HHHHHTT------CCS
T ss_pred eEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCH---HHHHhcC------ccc
Confidence 4688999999999988999999999999999999999999999999888899999999554 5999999 889
Q ss_pred eeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
+||+++|.+|.. ...|.|.++.+.|.+++.+.
T Consensus 76 ~Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 107 (109)
T 3tco_A 76 IPTTLIFVNGQL----VDSLVGAVDEDTLESTVNKY 107 (109)
T ss_dssp SSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CCEEEEEcCCcE----EEeeeccCCHHHHHHHHHHH
Confidence 999999987754 46789999999999999876
No 48
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.61 E-value=1.9e-16 Score=137.86 Aligned_cols=102 Identities=20% Similarity=0.276 Sum_probs=91.6
Q ss_pred eEEEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceee
Q 006171 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~ 216 (658)
.|..+|.++|++.+ ++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++ .+|++++ |++
T Consensus 4 ~v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~------v~~ 73 (106)
T 3die_A 4 AIVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENP---STAAKYE------VMS 73 (106)
T ss_dssp CCEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHHHHTT------CCS
T ss_pred ceEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCH---HHHHhCC------Ccc
Confidence 36889999999999 8899999999999999999999999999999888899999999554 5999999 889
Q ss_pred eeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
+||+++|.+|.. ...|.|.++.+.|.+|+.+.
T Consensus 74 ~Pt~~~~~~G~~----~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 74 IPTLIVFKDGQP----VDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp BSEEEEEETTEE----EEEEESCCCHHHHHHHHHTT
T ss_pred cCEEEEEeCCeE----EEEEeCCCCHHHHHHHHHHh
Confidence 999999987753 46789999999999998764
No 49
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.61 E-value=3.3e-16 Score=136.54 Aligned_cols=103 Identities=17% Similarity=0.253 Sum_probs=91.3
Q ss_pred eEEEecCCCCCccc-cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCccccee
Q 006171 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~ 215 (658)
.|..++.++|+..+ .++++++|.||++||++|+.+.|.++++++.+.+.+.++.|||++++ .+|++++ |.
T Consensus 3 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~------v~ 73 (107)
T 2i4a_A 3 HTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNP---ETPNAYQ------VR 73 (107)
T ss_dssp CEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCC---HHHHHTT------CC
T ss_pred ceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCH---HHHHhcC------CC
Confidence 47899999999877 78899999999999999999999999999999877899999999554 4999999 88
Q ss_pred eeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 216 ~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
++||+++|++|.. ...|.|.++.+.|.+|+.+.
T Consensus 74 ~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 74 SIPTLMLVRDGKV----IDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp SSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHT
T ss_pred ccCEEEEEeCCEE----EEEecCCCCHHHHHHHHHhc
Confidence 9999999977753 45688999999999998764
No 50
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.61 E-value=1.3e-16 Score=142.04 Aligned_cols=68 Identities=26% Similarity=0.335 Sum_probs=63.0
Q ss_pred ccCcccccCccCCC-CHHHHHHHHHHHHHhcCCCCCCC------hHHHHHHHHHHHHHcCChhhhhcccccCchh
Q 006171 36 PPSHYDALGIKPYS-SVEQVKEAYEKFSSKWNSGEEIP------STADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (658)
Q Consensus 36 ~~d~Y~iLgv~~~a-~~~eIk~ayr~l~~~~HPD~~~~------~~~~f~~i~~Aye~L~d~~~R~~YD~~g~~~ 103 (658)
..|||+||||+++| +.++||+|||+|+++||||++++ +.++|++|++||++|+||.+|+.||++|...
T Consensus 14 ~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~~ 88 (109)
T 2qsa_A 14 LENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDHP 88 (109)
T ss_dssp TSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCT
T ss_pred CCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccCc
Confidence 67999999999999 99999999999999999999864 4577999999999999999999999998654
No 51
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.61 E-value=1.9e-16 Score=137.96 Aligned_cols=102 Identities=12% Similarity=0.196 Sum_probs=89.7
Q ss_pred EEEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeee
Q 006171 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (658)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~y 217 (658)
|..||.++|+..+.++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++ .+|++++ |.++
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~---~~~~~~~------v~~~ 72 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENP---ETTSQFG------IMSI 72 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCH---HHHHHTT------CCSS
T ss_pred ceeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCH---HHHHHcC------Cccc
Confidence 578999999977788899999999999999999999999999999877899999999554 5999999 8899
Q ss_pred eEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
||+++|++|.. ...|.|..+.+.|.+++.+.
T Consensus 73 Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 73 PTLILFKGGRP----VKQLIGYQPKEQLEAQLADV 103 (105)
T ss_dssp SEEEEEETTEE----EEEEESCCCHHHHHHHTTTT
T ss_pred cEEEEEeCCeE----EEEEecCCCHHHHHHHHHHH
Confidence 99999977753 45688999999999987654
No 52
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.60 E-value=2.7e-16 Score=137.67 Aligned_cols=98 Identities=13% Similarity=0.156 Sum_probs=76.6
Q ss_pred ecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeeeEE
Q 006171 141 VTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSL 220 (658)
Q Consensus 141 Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl 220 (658)
-|.++|++.+.++++++|.||||||++|+.+.|.|+++++.+. .+.++.|||++++ .+|++++ |+++||+
T Consensus 6 ~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~~~~~---~l~~~~~------v~~~Pt~ 75 (105)
T 4euy_A 6 KTIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-YVEKIEILLQDMQ---EIAGRYA------VFTGPTV 75 (105)
T ss_dssp ----CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-TEEEEEEEECCC------------------CCCCEE
T ss_pred CCHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-CceEEEEECCCCH---HHHHhcC------CCCCCEE
Confidence 3568899999889999999999999999999999999999884 5799999999655 4889988 8899999
Q ss_pred EEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 221 VAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 221 ~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
++|.+|.. ...+.|.++.+.|.+++.+.
T Consensus 76 ~~~~~G~~----~~~~~g~~~~~~l~~~l~~~ 103 (105)
T 4euy_A 76 LLFYNGKE----ILRESRFISLENLERTIQLF 103 (105)
T ss_dssp EEEETTEE----EEEEESSCCHHHHHHHHHTT
T ss_pred EEEeCCeE----EEEEeCCcCHHHHHHHHHHh
Confidence 99988754 46778999999999998765
No 53
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.60 E-value=4.3e-16 Score=145.19 Aligned_cols=105 Identities=17% Similarity=0.297 Sum_probs=94.8
Q ss_pred eEEEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceee
Q 006171 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~ 216 (658)
.+..++.++|+..+..+++++|.||++||++|+++.|.|+++++.+.+.+.++.||+++++ .++++++ |.+
T Consensus 39 ~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~---~l~~~~~------v~~ 109 (148)
T 3p2a_A 39 EVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEP---ALSTRFR------IRS 109 (148)
T ss_dssp CCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHHHHTT------CCS
T ss_pred CceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCH---HHHHHCC------CCc
Confidence 4689999999999988999999999999999999999999999999888899999999554 5999999 889
Q ss_pred eeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHhhc
Q 006171 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAIL 254 (658)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v~ 254 (658)
+||+++|.+|.. ...|.|.++.+.|.+|+.+.+.
T Consensus 110 ~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~l~ 143 (148)
T 3p2a_A 110 IPTIMLYRNGKM----IDMLNGAVPKAPFDNWLDEQLS 143 (148)
T ss_dssp SSEEEEEETTEE----EEEESSCCCHHHHHHHHHHHHH
T ss_pred cCEEEEEECCeE----EEEEeCCCCHHHHHHHHHHHhc
Confidence 999999988754 4678999999999999988744
No 54
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.60 E-value=3.6e-16 Score=142.73 Aligned_cols=104 Identities=15% Similarity=0.218 Sum_probs=91.5
Q ss_pred ceEEEecCCCCCccc-cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccce
Q 006171 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (658)
Q Consensus 136 ~~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V 214 (658)
+.|..||.++|++.+ .++++++|.||++||++|+++.|.|+++++.+++.+.++.|||++++ .+|++++ |
T Consensus 22 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~---~l~~~~~------v 92 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNP---GTAPKYG------I 92 (128)
T ss_dssp CCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCC---TTSGGGT------C
T ss_pred cccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCH---HHHHHcC------C
Confidence 357889999999776 78899999999999999999999999999999877899999999654 4888888 8
Q ss_pred eeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 215 ~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
.++||+++|++|.. ...|.|.++.+.|.+|+.+.
T Consensus 93 ~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 126 (128)
T 2o8v_B 93 RGIPTLLLFKNGEV----AATKVGALSKGQLKEFLDAN 126 (128)
T ss_dssp CSSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CccCEEEEEeCCEE----EEEEcCCCCHHHHHHHHHHh
Confidence 89999999977753 45689999999999999875
No 55
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.59 E-value=3.5e-16 Score=144.78 Aligned_cols=103 Identities=15% Similarity=0.183 Sum_probs=92.7
Q ss_pred eEEEecCCCCCccc-cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCccccee
Q 006171 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~ 215 (658)
.|..||.++|++.+ .++++++|.||++||++|+++.|.|+++++.+.+.+.++.|||++++ .+|++++ |+
T Consensus 7 ~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~---~l~~~~~------v~ 77 (140)
T 3hz4_A 7 SIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNP---WTAEKYG------VQ 77 (140)
T ss_dssp TEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCH---HHHHHHT------CC
T ss_pred ceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCH---hHHHHCC------CC
Confidence 57999999999554 78999999999999999999999999999999988899999999554 5999999 88
Q ss_pred eeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 216 ~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
++||+++|.+|.. ...|.|.++.+.|.+|+.+.
T Consensus 78 ~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 110 (140)
T 3hz4_A 78 GTPTFKFFCHGRP----VWEQVGQIYPSILKNAVRDM 110 (140)
T ss_dssp EESEEEEEETTEE----EEEEESSCCHHHHHHHHHHH
T ss_pred cCCEEEEEeCCcE----EEEEcCCCCHHHHHHHHHHH
Confidence 9999999988754 46789999999999999887
No 56
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.59 E-value=4.3e-16 Score=137.48 Aligned_cols=103 Identities=17% Similarity=0.203 Sum_probs=91.5
Q ss_pred eEEEecCCCCCccc-cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCccccee
Q 006171 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~ 215 (658)
.|..+|.++|+..+ +++++++|.||++||++|+.+.|.|+++++.+++.+.+..|||++++ .+|++++ |.
T Consensus 6 ~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~------v~ 76 (112)
T 1t00_A 6 TLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENP---GTAAKYG------VM 76 (112)
T ss_dssp CCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHHHHTT------CC
T ss_pred eEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCH---HHHHhCC------CC
Confidence 47889999998777 67899999999999999999999999999999877899999999554 5999999 88
Q ss_pred eeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 216 ~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
++||+++|++|.. ...|.|.++.+.|.+|+.+.
T Consensus 77 ~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 109 (112)
T 1t00_A 77 SIPTLNVYQGGEV----AKTIVGAKPKAAIVRDLEDF 109 (112)
T ss_dssp SSSEEEEEETTEE----EEEEESCCCHHHHHHHTHHH
T ss_pred cccEEEEEeCCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 9999999987753 45688999999999998876
No 57
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.59 E-value=5.4e-16 Score=140.24 Aligned_cols=102 Identities=19% Similarity=0.397 Sum_probs=89.3
Q ss_pred cceEEEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhc-ccceeeeecccchhhhHHHhhCCCCcccc
Q 006171 135 VHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDIRLATHLAERKPIGQIFF 213 (658)
Q Consensus 135 ~~~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g-~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~ 213 (658)
.+.|..||.++|++.++.. ++|.|||+||++|+++.|.|+++++.+++ .+.++.|||++++ .+|++++
T Consensus 6 ~~~v~~l~~~~f~~~~~~~--vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~---~~~~~~~------ 74 (126)
T 1x5e_A 6 SGNVRVITDENWRELLEGD--WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQP---GLSGRFI------ 74 (126)
T ss_dssp CCSEEECCTTTHHHHTSSE--EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCH---HHHHHTT------
T ss_pred CCccEEecHHHHHHHhCCC--EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCH---HHHHHcC------
Confidence 3468999999999877543 99999999999999999999999999986 5699999999554 4999999
Q ss_pred eeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 214 V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|+++||+++|++|. ...|.|.++.+.|.+|+.+.
T Consensus 75 v~~~Pt~~~~~~G~-----~~~~~G~~~~~~l~~~l~~~ 108 (126)
T 1x5e_A 75 INALPTIYHCKDGE-----FRRYQGPRTKKDFINFISDK 108 (126)
T ss_dssp CCSSSEEEEEETTE-----EEECCSCCCHHHHHHHHHTC
T ss_pred CcccCEEEEEeCCe-----EEEeecCCCHHHHHHHHHHH
Confidence 88999999997774 36789999999999999876
No 58
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.59 E-value=7.7e-16 Score=136.00 Aligned_cols=103 Identities=17% Similarity=0.189 Sum_probs=92.1
Q ss_pred eEEEecCCCCCccc-cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCccccee
Q 006171 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~ 215 (658)
.|..++.++|+..+ .++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++ .+|++++ |.
T Consensus 8 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~---~~~~~~~------v~ 78 (115)
T 1thx_A 8 GVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNP---TTVKKYK------VE 78 (115)
T ss_dssp SEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCH---HHHHHTT------CC
T ss_pred ceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCH---HHHHHcC------CC
Confidence 47899999999887 78899999999999999999999999999999877899999999554 5999999 88
Q ss_pred eeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 216 ~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
++||+++|++|.. ...|.|.++.+.|.+|+.+.
T Consensus 79 ~~Pt~~~~~~G~~----~~~~~g~~~~~~l~~~l~~~ 111 (115)
T 1thx_A 79 GVPALRLVKGEQI----LDSTEGVISKDKLLSFLDTH 111 (115)
T ss_dssp SSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred ceeEEEEEcCCEE----EEEecCCCCHHHHHHHHHHH
Confidence 9999999977753 45688999999999999876
No 59
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.59 E-value=2.1e-16 Score=141.77 Aligned_cols=106 Identities=13% Similarity=0.242 Sum_probs=91.0
Q ss_pred eEEEecCCCCCccc-cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCccccee
Q 006171 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~ 215 (658)
.|..||.++|++.+ .++++++|.||++||++|+++.|.|+++++.+.+.+.++.|||++++ .+|++++ |+
T Consensus 4 ~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~------v~ 74 (122)
T 3aps_A 4 ASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYP---QTCQKAG------IK 74 (122)
T ss_dssp CSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCH---HHHHHTT------CC
T ss_pred chhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCH---HHHHHcC------CC
Confidence 46889999996554 78899999999999999999999999999999887899999999554 5999999 88
Q ss_pred eeeEEEEcCCCCCCCCCcccccCC----CCHhHHHHHHHHhhcc
Q 006171 216 GLPSLVAFPPGCKSSDCMTRFEGE----LSVDAVTDWFATAILK 255 (658)
Q Consensus 216 ~yPTl~~f~~g~~~~~~~~~Y~G~----rs~~~Lv~fv~k~v~~ 255 (658)
++||+++|.+|.. ...|.|. ++.+.|.+|+.+.+..
T Consensus 75 ~~Pt~~~~~~~~~----~~~~~g~~~~~~~~~~l~~~l~~~l~~ 114 (122)
T 3aps_A 75 AYPSVKLYQYERA----KKSIWEEQINSRDAKTIAALIYGKLET 114 (122)
T ss_dssp SSSEEEEEEEEGG----GTEEEEEEECCSCHHHHHHHHHHHHHC
T ss_pred ccceEEEEeCCCc----cceeeccccCcCCHHHHHHHHHHHHHh
Confidence 9999999977653 3556665 8999999999887443
No 60
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.59 E-value=3.7e-16 Score=134.94 Aligned_cols=101 Identities=13% Similarity=0.191 Sum_probs=90.4
Q ss_pred EEEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeee
Q 006171 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (658)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~y 217 (658)
|..||.++|++.+.++++++|.||++||++|+.+.|.++++++.+.+ +.++.|||++++ .+|++++ |+++
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~---~~~~~~~------v~~~ 70 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENP---DIAARYG------VMSL 70 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCH---HHHHHTT------CCSS
T ss_pred CeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCH---HHHHhCC------cccc
Confidence 46799999999998889999999999999999999999999999987 899999999554 5999999 8899
Q ss_pred eEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
||+++|++|.. ...|.|.++.+.|.+|+.+.
T Consensus 71 Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 71 PTVIFFKDGEP----VDEIIGAVPREEIEIRIKNL 101 (104)
T ss_dssp CEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CEEEEEECCeE----hhhccCCCCHHHHHHHHHHH
Confidence 99999977753 45789999999999999876
No 61
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.59 E-value=4.1e-16 Score=143.76 Aligned_cols=104 Identities=13% Similarity=0.052 Sum_probs=92.1
Q ss_pred eEEEecCCCCCcccc-CCCcEEEEEeccCC--CCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccc
Q 006171 137 AFNVVTSEDFPSIFH-DSKPWLIQVYSDGS--YLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v~-~~~~~lV~FYapwC--~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~ 213 (658)
....+|.+||++.|. +..++||.|||+|| ++|+.++|+.+++|+++.+.++|++||.++++ .|+.+|+
T Consensus 16 g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~---~la~~yg------ 86 (137)
T 2qsi_A 16 APTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAER---GLMARFG------ 86 (137)
T ss_dssp -CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHH---HHHHHHT------
T ss_pred CCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCH---HHHHHcC------
Confidence 446899999999995 44599999999999 99999999999999999998999999999555 5999999
Q ss_pred eeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHhh
Q 006171 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (658)
Q Consensus 214 V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v 253 (658)
|++.|||++|++|.. .....|.++.+.|.+++.+.+
T Consensus 87 V~siPTlilFkdG~~----v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 87 VAVCPSLAVVQPERT----LGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp CCSSSEEEEEECCEE----EEEEESCCCHHHHHHHHHHHH
T ss_pred CccCCEEEEEECCEE----EEEEeCCCCHHHHHHHHHHHh
Confidence 899999999999964 566789999999999998763
No 62
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.59 E-value=9.2e-16 Score=141.10 Aligned_cols=105 Identities=17% Similarity=0.192 Sum_probs=91.9
Q ss_pred ceEEEecCCCCCcccc------------CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHH
Q 006171 136 HAFNVVTSEDFPSIFH------------DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLA 203 (658)
Q Consensus 136 ~~V~~Lt~~nF~~~v~------------~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc 203 (658)
..|..||.++|.+.+. ++++++|.||++||++|+++.|.|+++++.+++.+.++.|||++++ .+|
T Consensus 9 ~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~---~l~ 85 (136)
T 2l5l_A 9 GKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQ---ELA 85 (136)
T ss_dssp TSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHH
T ss_pred CceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCH---HHH
Confidence 4678999999998873 4689999999999999999999999999999887899999999554 599
Q ss_pred hhCCCCcccceeeeeEEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHHhhc
Q 006171 204 ERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAIL 254 (658)
Q Consensus 204 ~k~~i~k~f~V~~yPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v~ 254 (658)
++++ |.++||+++| ++|.. ..|.|.++.+.|.+|+.+...
T Consensus 86 ~~~~------v~~~Pt~~~~~~~G~~-----~~~~G~~~~~~l~~~l~~~~~ 126 (136)
T 2l5l_A 86 GAFG------IRSIPSILFIPMEGKP-----EMAQGAMPKASFKKAIDEFLL 126 (136)
T ss_dssp HHTT------CCSSCEEEEECSSSCC-----EEEESCCCHHHHHHHHHHHHT
T ss_pred HHcC------CCCCCEEEEECCCCcE-----EEEeCCCCHHHHHHHHHHHhh
Confidence 9999 8899999999 66643 478999999999999988743
No 63
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.58 E-value=4e-16 Score=136.15 Aligned_cols=103 Identities=15% Similarity=0.174 Sum_probs=91.6
Q ss_pred eEEEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceee
Q 006171 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~ 216 (658)
.|..||.++|+..+.++++++|.||++||++|+.+.|.++++++.+.+.+.++.|||++++ .+|++++ |.+
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~------v~~ 72 (109)
T 2yzu_A 2 KPIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENP---KTAMRYR------VMS 72 (109)
T ss_dssp CCEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCH---HHHHHTT------CCS
T ss_pred cceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCH---hHHHhCC------CCc
Confidence 3688999999977788899999999999999999999999999999877899999999554 5999999 889
Q ss_pred eeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
+||+++|.+|.. ...|.|..+.+.|.+|+.+.
T Consensus 73 ~Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 104 (109)
T 2yzu_A 73 IPTVILFKDGQP----VEVLVGAQPKRNYQAKIEKH 104 (109)
T ss_dssp SSEEEEEETTEE----EEEEESCCCHHHHHHHHHTT
T ss_pred CCEEEEEeCCcE----eeeEeCCCCHHHHHHHHHHH
Confidence 999999977753 45689999999999999876
No 64
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.58 E-value=1.3e-13 Score=147.23 Aligned_cols=310 Identities=14% Similarity=0.204 Sum_probs=204.1
Q ss_pred eEEEecC-CCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCccccee
Q 006171 137 AFNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (658)
Q Consensus 137 ~V~~Lt~-~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~ 215 (658)
.+..|++ +++++++..+++++|-||.+-+..+ ...|.++|+.+ ....|+.++-. .+|++++ |+
T Consensus 18 ~~~~l~~~~~~~~~~~~~~~~vvgff~~~~~~~---~~~f~~~A~~~-~~~~F~~t~~~------~v~~~~~------v~ 81 (361)
T 3uem_A 18 FATTLPDGAAAESLVESSEVAVIGFFKDVESDS---AKQFLQAAEAI-DDIPFGITSNS------DVFSKYQ------LD 81 (361)
T ss_dssp SSEECCSHHHHHHHHHTSSEEEEEECSCTTSHH---HHHHHHHHHHC-SSSCEEEECCH------HHHHHTT------CS
T ss_pred cceecCCHHHHHHHHhcCCcEEEEEEcCCCchH---HHHHHHHHhcC-CCceEEEECcH------HHHHHhC------CC
Confidence 3466644 7788888888999999998766544 57999999988 44567654432 4899998 77
Q ss_pred eeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHhhccCCcceeeccchhhhhhhhhcCCCcEEEEEEe-CCCC---C
Q 006171 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFS-KTGE---R 291 (658)
Q Consensus 216 ~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~-~~~~---~ 291 (658)
. |+|++|+.... ....|+|..+.++|.+|+... ..|.+..++.++ ...+.... .++.+++|. ..+. .
T Consensus 82 ~-~~i~lfk~f~~---~~~~~~g~~~~~~i~~fi~~~--~~p~v~~~~~~~-~~~~~~~~--~~~~~v~F~~~~~~~~~~ 152 (361)
T 3uem_A 82 K-DGVVLFKKFDE---GRNNFEGEVTKENLLDFIKHN--QLPLVIEFTEQT-APKIFGGE--IKTHILLFLPKSVSDYDG 152 (361)
T ss_dssp S-SEEEEEESSTT---SEEECCSCCCHHHHHHHHHHH--SSCSEEECSTTT-HHHHHSCS--CCEEEEEECCSSSSSHHH
T ss_pred C-CeEEEEEecCC---CccccCCcCCHHHHHHHHHHc--CCCcceecCccc-HHHHhcCC--CCcEEEEEEeCCchhHHH
Confidence 7 99999986322 247899999999999999987 467666666655 34444322 234455554 3221 2
Q ss_pred CcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCC--CCEEEEEeCCCCCeeeec---CCCChHHHHHHHHhhccC
Q 006171 292 ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVES--APAIVFLKDPGVKPVVYY---GSFNNSRLSEVMEQNKLQ 366 (658)
Q Consensus 292 ~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~--~Ptlvlfk~~~~~p~~y~---g~~~~~~L~~fi~~~~~~ 366 (658)
..+.++.+|..|++.+.|+.+.....+...+++.|||+. +|+++++..++ .+..|. |.++.+.|.+|++...-.
T Consensus 153 ~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~-~~~ky~~~~~~~~~~~l~~fi~~~l~g 231 (361)
T 3uem_A 153 KLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEE-EMTKYKPESEELTAERITEFCHRFLEG 231 (361)
T ss_dssp HHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC---CCEECCSSCCCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCC-cccccCCCccccCHHHHHHHHHHHhcC
Confidence 346677899999988888888644223578999999987 99999998744 233464 788999999999875332
Q ss_pred C------------------CccccCcchhhhcccccCCcCCCCCCcccEEEEEEcC-CChhHHHHHHHHHHHHHhhcccc
Q 006171 367 E------------------LPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGR-LSPELNKMRETIRRVQETLLSDD 427 (658)
Q Consensus 367 ~------------------vP~lts~~~~~~~c~~~~~~~~~k~~~~~lcVi~~~~-~~~~~~~~~~~lr~~a~~~~~~~ 427 (658)
. +..++..+..+.... .++ .++|.+.. --.....+...++++++
T Consensus 232 ~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~~------~~k-----~~lv~f~a~wC~~C~~~~p~~~~la~------ 294 (361)
T 3uem_A 232 KIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFD------EKK-----NVFVEFYAPWCGHCKQLAPIWDKLGE------ 294 (361)
T ss_dssp CSCCCCBCCCCCTTTTTSSSEEECTTTHHHHHTC------TTC-----EEEEEEECTTCHHHHHHHHHHHHHHH------
T ss_pred CCcccccCCCCCcccccCCcEEeecCchhhhccc------CCC-----cEEEEEecCcCHhHHHHHHHHHHHHH------
Confidence 1 223444443332211 122 44444543 33455677777877777
Q ss_pred ccccccccCCchHHHHhcCC-CcEEEEEEeccchHHHHHHHcccCCcccccCCcCCCCCCCeEEEEEeecCCccccceec
Q 006171 428 ESNAADTDQSLAPAAVAFRN-KRLTFAWLDGEAQDRYCSFYLFSETSFETCGARRDMSDVPRLFIVRYKRNTTEDEAKIE 506 (658)
Q Consensus 428 ~~~~~~~~~~~~~~A~~~~~-~~v~F~wvd~~~q~~~~~~f~~~~~~~~~c~~~~~~~~~p~vvI~~~~~n~~~~~~k~~ 506 (658)
.+++ ..+.|++||.+.+. +. +..+...|.++++ +....
T Consensus 295 ----------------~~~~~~~v~~~~vd~~~~~--~~--------------~~~v~~~Pt~~~~----~~~~~----- 333 (361)
T 3uem_A 295 ----------------TYKDHENIVIAKMDSTANE--VE--------------AVKVHSFPTLKFF----PASAD----- 333 (361)
T ss_dssp ----------------HTTTCSSEEEEEEETTTCB--CS--------------SCCCCSSSEEEEE----CSSSS-----
T ss_pred ----------------HhccCCcEEEEEEECCccc--hh--------------hcCCcccCeEEEE----ECCCC-----
Confidence 4433 36999999997653 11 1245567999987 33210
Q ss_pred cccCcccccccccccCccccchhccCCCCChhHHHHHHHHHhh
Q 006171 507 RKPRNIWDAMQEQEVDPASQLVVRYNGSDEIPQIAKWVSEIIQ 549 (658)
Q Consensus 507 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~ 549 (658)
.....|.|.++.++|.+||.+--+
T Consensus 334 -------------------~~~~~~~G~~~~~~l~~~l~~~~~ 357 (361)
T 3uem_A 334 -------------------RTVIDYNGERTLDGFKKFLESGGQ 357 (361)
T ss_dssp -------------------CCCEECCSCSSHHHHHHHHTTTSC
T ss_pred -------------------cceeEecCCCCHHHHHHHHHhcCC
Confidence 001235677777889888876544
No 65
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.58 E-value=7.4e-16 Score=139.69 Aligned_cols=103 Identities=17% Similarity=0.254 Sum_probs=84.8
Q ss_pred eEEEecCCCCCccc-cCCCcEEEEEeccCCC--------------CCCCChHHHHHHHHHhhcccceeeeecccchhhhH
Q 006171 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSY--------------LCGQFSGAWKTIAALLEGIANTGMVELGDIRLATH 201 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~--------------~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~ 201 (658)
.|..||.++|++.+ +++++++|.|||+||+ +|+++.|.|+++++.+++.+.+++|||++++ .
T Consensus 4 ~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~---~ 80 (123)
T 1oaz_A 4 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP---G 80 (123)
T ss_dssp SCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCT---T
T ss_pred ccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCH---H
Confidence 46889999998766 7889999999999999 9999999999999999877899999999654 4
Q ss_pred HHhhCCCCcccceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 202 LAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 202 Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
+|++++ |+++||+++|++|.. ...|.|.++.++|.+|+.+.
T Consensus 81 l~~~~~------v~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 81 TAPKYG------IRGIPTLLLFKNGEV----AATKVGALSKGQLKEFLDAN 121 (123)
T ss_dssp TGGGGT------CCBSSEEEEEESSSE----EEEEESCCCHHHHHHHHTTT
T ss_pred HHHHcC------CCccCEEEEEECCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 889998 889999999987753 45789999999999998764
No 66
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.58 E-value=9.4e-16 Score=141.30 Aligned_cols=104 Identities=15% Similarity=0.180 Sum_probs=90.6
Q ss_pred ceEEEecCCCCCcccc------------CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHH
Q 006171 136 HAFNVVTSEDFPSIFH------------DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLA 203 (658)
Q Consensus 136 ~~V~~Lt~~nF~~~v~------------~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc 203 (658)
..|..||.++|+..+. .+++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++ .+|
T Consensus 22 ~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~ 98 (141)
T 3hxs_A 22 SGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEP---ELA 98 (141)
T ss_dssp -CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHH
T ss_pred CCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCH---HHH
Confidence 3578899999988883 4789999999999999999999999999999988899999999554 599
Q ss_pred hhCCCCcccceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 204 ERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 204 ~k~~i~k~f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
++++ |.++||+++|..++. ...|.|.++.+.|.+|+.+.
T Consensus 99 ~~~~------v~~~Pt~~~~~~~g~----~~~~~G~~~~~~l~~~l~~~ 137 (141)
T 3hxs_A 99 RDFG------IQSIPTIWFVPMKGE----PQVNMGALSKEQLKGYIDKV 137 (141)
T ss_dssp HHTT------CCSSSEEEEECSSSC----CEEEESCCCHHHHHHHHHHT
T ss_pred HHcC------CCCcCEEEEEeCCCC----EEEEeCCCCHHHHHHHHHHH
Confidence 9999 889999999955543 25889999999999999876
No 67
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.58 E-value=5.9e-16 Score=146.29 Aligned_cols=103 Identities=17% Similarity=0.291 Sum_probs=92.8
Q ss_pred eEEEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceee
Q 006171 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~ 216 (658)
.+..++.++|++.+.++++++|.||++||++|+.+.|.|+++++++.+.+.+++|||++++ .+|++++ |++
T Consensus 48 ~~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~---~l~~~~~------i~~ 118 (155)
T 2ppt_A 48 KVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHP---AVAGRHR------IQG 118 (155)
T ss_dssp SEEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTST---HHHHHTT------CCS
T ss_pred CCccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccH---HHHHHcC------CCc
Confidence 3688999999998877899999999999999999999999999999888899999999554 5999999 889
Q ss_pred eeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
+||+++|.+|.. ...|.|.++.+.|.+|+.+.
T Consensus 119 ~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 150 (155)
T 2ppt_A 119 IPAFILFHKGRE----LARAAGARPASELVGFVRGK 150 (155)
T ss_dssp SSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CCEEEEEeCCeE----EEEecCCCCHHHHHHHHHHH
Confidence 999999987753 45689999999999999887
No 68
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.58 E-value=3.6e-16 Score=144.63 Aligned_cols=103 Identities=9% Similarity=0.092 Sum_probs=93.2
Q ss_pred EEEecCCCCCccccCCCcEEEEEeccC--CCCCCCChHHHHHHHHHhhcc-cceeeeecccchhhhHHHhhCCCCcccce
Q 006171 138 FNVVTSEDFPSIFHDSKPWLIQVYSDG--SYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIGQIFFR 214 (658)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapw--C~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V 214 (658)
+..+|+++|++.|.++.++||.|||+| |++|+.++|..+++|+++.+. ++|++||.++++ .|+.+|+ |
T Consensus 19 ~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~---~lA~~yg------V 89 (140)
T 2qgv_A 19 WTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSE---AIGDRFG------A 89 (140)
T ss_dssp CEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHH---HHHHHHT------C
T ss_pred CccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCH---HHHHHcC------C
Confidence 367999999999988889999999999 999999999999999999998 999999999554 5999999 8
Q ss_pred eeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHhh
Q 006171 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (658)
Q Consensus 215 ~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v 253 (658)
+++|||++|++|.. .....|.++.+.|.+++.+.+
T Consensus 90 ~sIPTlilFk~G~~----v~~~~G~~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 90 FRFPATLVFTGGNY----RGVLNGIHPWAELINLMRGLV 124 (140)
T ss_dssp CSSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHHH
T ss_pred ccCCEEEEEECCEE----EEEEecCCCHHHHHHHHHHHh
Confidence 99999999999964 466789999999999998874
No 69
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.57 E-value=6.5e-16 Score=135.02 Aligned_cols=102 Identities=15% Similarity=0.221 Sum_probs=90.4
Q ss_pred EEEecCCCCCccc-cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceee
Q 006171 138 FNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (658)
Q Consensus 138 V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~ 216 (658)
|..+|.++|++.+ .++++++|.||++||++|+.+.|.++++++.+.+.+.++.|||++++ .+|++++ |.+
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~------v~~ 73 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESP---NVASEYG------IRS 73 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHHHHHT------CCS
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCH---HHHHHCC------CCc
Confidence 5789999999877 67899999999999999999999999999999877899999999554 5899998 889
Q ss_pred eeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
+||+++|++|.. ...+.|..+.+.|.+++.+.
T Consensus 74 ~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 105 (107)
T 1dby_A 74 IPTIMVFKGGKK----CETIIGAVPKATIVQTVEKY 105 (107)
T ss_dssp SCEEEEESSSSE----EEEEESCCCHHHHHHHHHHH
T ss_pred CCEEEEEeCCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 999999987753 45688999999999998775
No 70
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.57 E-value=2.3e-16 Score=141.05 Aligned_cols=66 Identities=15% Similarity=0.147 Sum_probs=61.1
Q ss_pred ccCcccccCccCCCCH--HHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHcCChhhhhcccccCch
Q 006171 36 PPSHYDALGIKPYSSV--EQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGID 102 (658)
Q Consensus 36 ~~d~Y~iLgv~~~a~~--~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Aye~L~d~~~R~~YD~~g~~ 102 (658)
..++|+||||+++|+. ++||+|||+|+++||||+++. .++|++|++||++|+||.+|+.||.+|..
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~-~e~f~~I~~AYevL~d~~~R~~~~~~~~~ 74 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-EEKMKKMNTLYKKMEDGVKYAHQPDFGGF 74 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT-TTTTHHHHHHHHHHHHHHHSCCSSCCSCC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc-HHHHHHHHHHHHHHCCHHHHHHhhhcccc
Confidence 3589999999999999 999999999999999999864 67899999999999999999999998753
No 71
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.57 E-value=1.9e-15 Score=153.64 Aligned_cols=105 Identities=12% Similarity=0.110 Sum_probs=89.9
Q ss_pred ceEEEecCCCCCccccCCCcEEEEEe--ccCCCCCCCChHHHHHHHHHhhc---ccceeeeecccc--hhhhHHHhhCCC
Q 006171 136 HAFNVVTSEDFPSIFHDSKPWLIQVY--SDGSYLCGQFSGAWKTIAALLEG---IANTGMVELGDI--RLATHLAERKPI 208 (658)
Q Consensus 136 ~~V~~Lt~~nF~~~v~~~~~~lV~FY--apwC~~Ck~l~P~w~~~A~~l~g---~~~vg~Vdc~e~--~~~~~Lc~k~~i 208 (658)
+.|+.||..||+++++++++|||.|| ||||+ ++|.|+++|+.+.+ .+.|++|||++. .....||++|+
T Consensus 16 ~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~- 90 (248)
T 2c0g_A 16 TGCVDLDELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYK- 90 (248)
T ss_dssp TTCEECCTTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTT-
T ss_pred CCcEECCHHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhC-
Confidence 34789999999997788899999999 99999 99999999999965 569999999961 11346999999
Q ss_pred Cccccee--eeeEEEEcCCCCCCCCCcccc--cCCCCHhHHHHHHHHhh
Q 006171 209 GQIFFRR--GLPSLVAFPPGCKSSDCMTRF--EGELSVDAVTDWFATAI 253 (658)
Q Consensus 209 ~k~f~V~--~yPTl~~f~~g~~~~~~~~~Y--~G~rs~~~Lv~fv~k~v 253 (658)
|+ +||||++|+ |.. ..+..| .|.++.++|++|+.+.+
T Consensus 91 -----V~~~~~PTl~~F~-G~~--~~~~~y~~~G~~~~~~L~~fi~~~~ 131 (248)
T 2c0g_A 91 -----VDDKNFPSIFLFK-GNA--DEYVQLPSHVDVTLDNLKAFVSANT 131 (248)
T ss_dssp -----CCTTSCCEEEEES-SSS--SSEEECCTTSCCCHHHHHHHHHHHS
T ss_pred -----CCcCCCCeEEEEe-CCc--CcceeecccCCCCHHHHHHHHHHhh
Confidence 99 999999999 752 135789 99999999999999873
No 72
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.57 E-value=5.6e-16 Score=138.52 Aligned_cols=104 Identities=17% Similarity=0.194 Sum_probs=91.8
Q ss_pred ceEEEecCCCCCccc-cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccce
Q 006171 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (658)
Q Consensus 136 ~~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V 214 (658)
+.|..++.++|...+ .++++++|.||++||++|+.+.|.|+++++.+++.+.++.|||++++ .+|++++ |
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~------i 82 (121)
T 2i1u_A 12 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNP---ETARNFQ------V 82 (121)
T ss_dssp CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHHHHTT------C
T ss_pred ccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCH---HHHHhcC------C
Confidence 357889999998776 77899999999999999999999999999999877899999999554 5999999 8
Q ss_pred eeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 215 ~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
.++||+++|++|.. ...|.|.++.+.|.+|+.+.
T Consensus 83 ~~~Pt~~~~~~g~~----~~~~~G~~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 83 VSIPTLILFKDGQP----VKRIVGAKGKAALLRELSDV 116 (121)
T ss_dssp CSSSEEEEEETTEE----EEEEESCCCHHHHHHHTCSC
T ss_pred CcCCEEEEEECCEE----EEEecCCCCHHHHHHHHHHH
Confidence 89999999987753 46789999999999998766
No 73
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.57 E-value=1.1e-15 Score=132.79 Aligned_cols=102 Identities=13% Similarity=0.207 Sum_probs=90.1
Q ss_pred EEEecCCCCCccc-cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceee
Q 006171 138 FNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (658)
Q Consensus 138 V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~ 216 (658)
|..+|.++|+..+ .++++++|.||++||++|+.+.|.++++++.+.+.+.+..|||++++ .+|++++ |.+
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~------v~~ 72 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAP---GIATQYN------IRS 72 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH---HHHHHTT------CCS
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchH---HHHHhCC------CCc
Confidence 5678999999877 67899999999999999999999999999999887899999999554 5999999 889
Q ss_pred eeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
+||+++|++|.. ...+.|..+.+.|.+++.+.
T Consensus 73 ~Pt~~~~~~g~~----~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 73 IPTVLFFKNGER----KESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp SSEEEEEETTEE----EEEEEECCCHHHHHHHHHHH
T ss_pred ccEEEEEeCCeE----EEEEecCCCHHHHHHHHHhh
Confidence 999999987753 45688999999999998765
No 74
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.56 E-value=5.1e-16 Score=138.92 Aligned_cols=99 Identities=11% Similarity=0.172 Sum_probs=87.6
Q ss_pred EEecCCCCCcccc--CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceee
Q 006171 139 NVVTSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (658)
Q Consensus 139 ~~Lt~~nF~~~v~--~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~ 216 (658)
...|.++|++.+. .+++++|.|||+||++|+++.|.|+++++++.+ +.++.|||++++ .+|++++ |.+
T Consensus 15 ~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~---~l~~~~~------v~~ 84 (116)
T 3qfa_C 15 QIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQ---DVASECE------VKS 84 (116)
T ss_dssp CCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTH---HHHHHTT------CCS
T ss_pred CCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCH---HHHHHcC------Ccc
Confidence 4577889999886 899999999999999999999999999999877 899999999554 5999999 889
Q ss_pred eeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
+||+++|.+|.. ...|.|. +.+.|.+++.+.
T Consensus 85 ~Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 85 MPTFQFFKKGQK----VGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp SSEEEEESSSSE----EEEEESC-CHHHHHHHHHHH
T ss_pred ccEEEEEeCCeE----EEEEcCC-CHHHHHHHHHHh
Confidence 999999988754 4668898 999999999765
No 75
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.56 E-value=1e-15 Score=137.38 Aligned_cols=103 Identities=17% Similarity=0.283 Sum_probs=91.6
Q ss_pred eEEEecCCCCCccc-cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCccccee
Q 006171 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~ 215 (658)
.|..+|.++|++.+ +++++++|.||++||++|+++.|.|+++++.+.+.+.++.|||+++. .+|++++ |.
T Consensus 14 ~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~---~l~~~~~------v~ 84 (119)
T 1w4v_A 14 TFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHT---DLAIEYE------VS 84 (119)
T ss_dssp EEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTH---HHHHHTT------CC
T ss_pred EEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCH---HHHHHcC------CC
Confidence 57899999999877 67899999999999999999999999999999877899999999554 5999999 88
Q ss_pred eeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 216 ~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
++||+++|++|.. ...|.|.++.+.|.+|+.+.
T Consensus 85 ~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 85 AVPTVLAMKNGDV----VDKFVGIKDEDQLEAFLKKL 117 (119)
T ss_dssp SSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred cccEEEEEeCCcE----EEEEcCCCCHHHHHHHHHHH
Confidence 9999999977753 45788999999999999775
No 76
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.56 E-value=3.1e-14 Score=144.56 Aligned_cols=186 Identities=11% Similarity=0.096 Sum_probs=131.4
Q ss_pred CCCcEEEEEeccC--CCCCCCChHHHHHHHHHh---hcc--cceeeeecccchhhhHHHhhCCCCcccceeeeeEEEEcC
Q 006171 152 DSKPWLIQVYSDG--SYLCGQFSGAWKTIAALL---EGI--ANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFP 224 (658)
Q Consensus 152 ~~~~~lV~FYapw--C~~Ck~l~P~w~~~A~~l---~g~--~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl~~f~ 224 (658)
-..+++|.||++| |++|+.+.|.++++|+.. +|. +.|+.+||++++ .+|++|+ |+++||+++|
T Consensus 24 ~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~---~~~~~~g------v~~~Pt~~i~- 93 (243)
T 2hls_A 24 MVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDS---DKFSEFK------VERVPTVAFL- 93 (243)
T ss_dssp CCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTH---HHHHHTT------CCSSSEEEET-
T ss_pred CCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCH---HHHHhcC------CCcCCEEEEE-
Confidence 4579999999999 999999999999999873 443 789999999554 5999999 8899999999
Q ss_pred CCCCCCCCcccccCCCCHhHHHHHHHHhhc-cCCcceeeccchhhhhhhhhcCCCcEEEE-EEeCC---CCCCcHHHHHH
Q 006171 225 PGCKSSDCMTRFEGELSVDAVTDWFATAIL-KLPRIFYYTKESMGKNFLAKTGPHKVKVI-FFSKT---GERASPFVRQI 299 (658)
Q Consensus 225 ~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v~-~lP~~~~it~~~~~~~Fl~~~~~~~v~vl-~f~~~---~~~~~~~~~~~ 299 (658)
+| . ..|.|.++.+.+..|+...+. +.+... ++. +..+. +... ..++.++ |+... |....|.+..+
T Consensus 94 ~g-~-----~~~~G~~~~~~l~~fv~~~l~~~~~~~~-l~~-~~~~~-~~~~-~~~~~vv~F~a~wC~~C~~~~p~l~~l 163 (243)
T 2hls_A 94 GG-E-----VRWTGIPAGEEIRALVEVIMRLSEDESG-LED-ATKEA-LKSL-KGRVHIETIITPSCPYCPYAVLLAHMF 163 (243)
T ss_dssp TT-T-----EEEESCCCTTHHHHHHHHHHHHHTTCCC-CCH-HHHHH-HHHC-CSCEEEEEEECSSCSSHHHHHHHHHHH
T ss_pred CC-c-----eeEcCCCcHHHHHHHHHHHHhccCCCCC-CCH-HHHHH-HHHc-CCCcEEEEEECCCCCCcHHHHHHHHHH
Confidence 55 3 789999988999999877532 122111 221 21222 2222 2345455 44432 22245666667
Q ss_pred HHhhc----cCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHhhc
Q 006171 300 SRNYW----AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (658)
Q Consensus 300 A~~~~----~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~~~ 364 (658)
+..+. ..+.++.+... ..++++++|+|.++||+++ ++ + ..|.|..+.+.|.+++....
T Consensus 164 a~~~~~~~~~~v~~~~vd~~--~~~~~~~~~~V~~vPt~~i--~G--~-~~~~G~~~~~~l~~~l~~~~ 225 (243)
T 2hls_A 164 AYEAWKQGNPVILSEAVEAY--ENPDIADKYGVMSVPSIAI--NG--Y-LVFVGVPYEEDFLDYVKSAA 225 (243)
T ss_dssp HHHHHHTTCCCEEEEEEETT--TCHHHHHHTTCCSSSEEEE--TT--E-EEEESCCCHHHHHHHHHHHH
T ss_pred HHHcccccCCcEEEEEEECc--cCHHHHHHcCCeeeCeEEE--CC--E-EEEeCCCCHHHHHHHHHHHh
Confidence 77763 34566666432 2467999999999999988 33 2 34899999999999998754
No 77
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=1.6e-15 Score=130.34 Aligned_cols=60 Identities=23% Similarity=0.333 Sum_probs=56.4
Q ss_pred ccCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCC--ChHHHHHHHHHHHHHcCChhhhhc
Q 006171 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRN 95 (658)
Q Consensus 36 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~--~~~~~f~~i~~Aye~L~d~~~R~~ 95 (658)
..|||+||||+++|+.++||+|||+|+++||||+++ .+.++|++|++||++|+||.+|+.
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence 579999999999999999999999999999999985 678899999999999999999875
No 78
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=6.5e-16 Score=142.16 Aligned_cols=103 Identities=16% Similarity=0.292 Sum_probs=87.8
Q ss_pred eEEEecCCCCCcccc--CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhc-ccceeeeecccchhhhHHHhhCCCCcccc
Q 006171 137 AFNVVTSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDIRLATHLAERKPIGQIFF 213 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v~--~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g-~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~ 213 (658)
.|..+|.++|+..+. .+++++|.|||+||++|+.+.|.|+++++++++ .+.++.|||++++ .+|++++
T Consensus 8 ~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~---~~~~~~~------ 78 (137)
T 2dj0_A 8 YIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYT---DVSTRYK------ 78 (137)
T ss_dssp CCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCH---HHHHHTT------
T ss_pred eEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCH---HHHHHcc------
Confidence 478899999999994 345999999999999999999999999999986 5799999999554 5999998
Q ss_pred ee------eeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 214 RR------GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 214 V~------~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|. ++||+++|.+|.. ...+.|.++.+.|.+|+.+.
T Consensus 79 v~~~~~~~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 79 VSTSPLTKQLPTLILFQGGKE----AMRRPQIDKKGRAVSWTFSE 119 (137)
T ss_dssp CCCCSSSSCSSEEEEESSSSE----EEEESCBCSSSCBCCCCCCH
T ss_pred CcccCCcCCCCEEEEEECCEE----EEEecCcCchHHHHHHHhcc
Confidence 77 9999999988854 45688999888888776443
No 79
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.55 E-value=3.3e-15 Score=149.87 Aligned_cols=102 Identities=21% Similarity=0.304 Sum_probs=92.2
Q ss_pred eEEEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc---cceeeeecccchhhhHHHhhCCCCcccc
Q 006171 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI---ANTGMVELGDIRLATHLAERKPIGQIFF 213 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~---~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~ 213 (658)
.+..++.++|+..+..+++++|.|||+||++|+.+.|.|+++|+.+.+. +.++.|||++++ .+|++++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~---~l~~~~~------ 201 (241)
T 3idv_A 131 VTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAET---DLAKRFD------ 201 (241)
T ss_dssp SSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCH---HHHHHTT------
T ss_pred cceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCH---HHHHHcC------
Confidence 4578999999999988889999999999999999999999999999765 699999999554 5999999
Q ss_pred eeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 214 V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|+++||+++|.+|.. ..|.|.++.++|++|+.+.
T Consensus 202 v~~~Pt~~~~~~g~~-----~~~~g~~~~~~l~~~l~~~ 235 (241)
T 3idv_A 202 VSGYPTLKIFRKGRP-----YDYNGPREKYGIVDYMIEQ 235 (241)
T ss_dssp CCSSSEEEEEETTEE-----EECCSCCSHHHHHHHHHHH
T ss_pred CcccCEEEEEECCeE-----EEecCCCCHHHHHHHHHhh
Confidence 889999999998854 5699999999999999987
No 80
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.55 E-value=1.4e-15 Score=127.32 Aligned_cols=64 Identities=11% Similarity=0.123 Sum_probs=58.7
Q ss_pred cCcccccCccCC--CCHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHcCChhhhhcccccCch
Q 006171 37 PSHYDALGIKPY--SSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGID 102 (658)
Q Consensus 37 ~d~Y~iLgv~~~--a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Aye~L~d~~~R~~YD~~g~~ 102 (658)
.++|+||||+++ ++.++||+|||+|+++||||++ ++.++|++|++||++|+|+.+|.. +.||..
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~-~~~~~f~~i~~AYe~L~~~~~r~~-~~~g~~ 76 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG-GSHALMQELNSLWGTFKTEVYNLR-MNLGGT 76 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGS-CCHHHHHHHHHHHHHHHHHHHHHT-TCCSSC
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC-CCHHHHHHHHHHHHHHhhHHHHHH-HhcCCc
Confidence 579999999999 9999999999999999999997 467899999999999999999988 557754
No 81
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.55 E-value=4.9e-16 Score=148.34 Aligned_cols=65 Identities=15% Similarity=0.205 Sum_probs=58.5
Q ss_pred ccCcccccCccCCCC--HHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHcCChhhhhcccccCc
Q 006171 36 PPSHYDALGIKPYSS--VEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGI 101 (658)
Q Consensus 36 ~~d~Y~iLgv~~~a~--~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Aye~L~d~~~R~~YD~~g~ 101 (658)
..|+|+||||+++|+ .++||+|||+|++++|||+++. .++|++|++||++|+||.+|+.||++|.
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~-~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C-CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC-HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 469999999999999 6999999999999999999864 5789999999999999999999999995
No 82
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.54 E-value=6.7e-15 Score=137.24 Aligned_cols=102 Identities=11% Similarity=0.102 Sum_probs=76.9
Q ss_pred EEEecCCCCCccccCCCcEEEEEeccC--CCCCCCChHHHHHHHHHhhcccc--eeeeecccchhhhHHHhhCCCCcccc
Q 006171 138 FNVVTSEDFPSIFHDSKPWLIQVYSDG--SYLCGQFSGAWKTIAALLEGIAN--TGMVELGDIRLATHLAERKPIGQIFF 213 (658)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapw--C~~Ck~l~P~w~~~A~~l~g~~~--vg~Vdc~e~~~~~~Lc~k~~i~k~f~ 213 (658)
+..+|.++|++.+.+...++|.||++| |++|+.++|.|+++++++ +.+. +++||++++ ..+|++|+
T Consensus 19 ~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~---~~la~~~~------ 88 (142)
T 2es7_A 19 WQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQS---EAIGDRFN------ 88 (142)
T ss_dssp CEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHH---HHHHHTTT------
T ss_pred CcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCC---HHHHHhcC------
Confidence 478999999999977778999999987 999999999999999999 7778 999999944 45999999
Q ss_pred eeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHhh
Q 006171 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (658)
Q Consensus 214 V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v 253 (658)
|+++||+++|++|.. ...|.|.++.+.|.+|+.+.+
T Consensus 89 V~~iPT~~~fk~G~~----v~~~~G~~~~~~l~~~i~~~l 124 (142)
T 2es7_A 89 VRRFPATLVFTDGKL----RGALSGIHPWAELLTLMRSIV 124 (142)
T ss_dssp CCSSSEEEEESCC--------CEESCCCHHHHHHHHHHHH
T ss_pred CCcCCeEEEEeCCEE----EEEEeCCCCHHHHHHHHHHHh
Confidence 889999999988864 467899999999999998874
No 83
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.54 E-value=4.1e-15 Score=131.19 Aligned_cols=102 Identities=13% Similarity=0.162 Sum_probs=87.7
Q ss_pred ceEEEecCCCCCcccc--CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecc-cchhhhHHHhhCCCCccc
Q 006171 136 HAFNVVTSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG-DIRLATHLAERKPIGQIF 212 (658)
Q Consensus 136 ~~V~~Lt~~nF~~~v~--~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~-e~~~~~~Lc~k~~i~k~f 212 (658)
..|..||.++|++.+. .+++++|.||++||++|+++.|.|+++++.+.+ +.+..|||+ ++. .+|++++
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~~~~---~~~~~~~----- 75 (111)
T 2pu9_C 5 GKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD-VIFLKLDCNQENK---TLAKELG----- 75 (111)
T ss_dssp TSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTH---HHHHHHC-----
T ss_pred CccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC-eEEEEEecCcchH---HHHHHcC-----
Confidence 3588999999999985 689999999999999999999999999999875 789999998 443 4899998
Q ss_pred ceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 213 ~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|+++||+++|++|.. ...+.|.. .+.|.+++.+.
T Consensus 76 -v~~~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~l~~~ 109 (111)
T 2pu9_C 76 -IRVVPTFKILKENSV----VGEVTGAK-YDKLLEAIQAA 109 (111)
T ss_dssp -CSBSSEEEEESSSSE----EEEEESSC-HHHHHHHHHHH
T ss_pred -CCeeeEEEEEeCCcE----EEEEcCCC-HHHHHHHHHHh
Confidence 889999999988854 35678875 88999998765
No 84
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.54 E-value=2.9e-15 Score=149.80 Aligned_cols=105 Identities=16% Similarity=0.260 Sum_probs=93.7
Q ss_pred ceEEEecCCCCCccc-cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccce
Q 006171 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (658)
Q Consensus 136 ~~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V 214 (658)
+.+..||.++|+..+ +++++++|.|||+||++|+.+.|.|+++++.+++.+.++.|||++++ .+|++++ |
T Consensus 12 ~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~---~l~~~~~------v 82 (222)
T 3dxb_A 12 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP---GTAPKYG------I 82 (222)
T ss_dssp CCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCT---TTGGGGT------C
T ss_pred CCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCH---HHHHHcC------C
Confidence 356889999999865 78999999999999999999999999999999988899999999654 4888988 8
Q ss_pred eeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHhh
Q 006171 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (658)
Q Consensus 215 ~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v 253 (658)
.++||+++|++|.. ...|.|.++.+.|.+|+.+.+
T Consensus 83 ~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~l 117 (222)
T 3dxb_A 83 RGIPTLLLFKNGEV----AATKVGALSKGQLKEFLDANL 117 (222)
T ss_dssp CSBSEEEEEETTEE----EEEEESCCCHHHHHHHHHHHS
T ss_pred CcCCEEEEEECCeE----EEEeccccChHHHHHHHHhhc
Confidence 89999999998754 457899999999999999883
No 85
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.54 E-value=1.8e-15 Score=143.32 Aligned_cols=68 Identities=22% Similarity=0.456 Sum_probs=61.8
Q ss_pred CccCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCCCh---------HHHHHHHHHHHHHcCChhhhhcccccCch
Q 006171 35 FPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIPS---------TADFLKIQYAYELLTDPLWKRNYDVYGID 102 (658)
Q Consensus 35 ~~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~~~---------~~~f~~i~~Aye~L~d~~~R~~YD~~g~~ 102 (658)
...|||+||||+++|+.++||+|||+|+++||||+++.. .++|.+|++||++|+||.+|+.||..+..
T Consensus 8 ~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~ 84 (155)
T 2l6l_A 8 PKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCE 84 (155)
T ss_dssp CCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHH
T ss_pred CCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcch
Confidence 467999999999999999999999999999999998632 47899999999999999999999987643
No 86
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.54 E-value=4.1e-15 Score=135.16 Aligned_cols=96 Identities=11% Similarity=0.122 Sum_probs=82.7
Q ss_pred CCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeeeEEEE
Q 006171 143 SEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVA 222 (658)
Q Consensus 143 ~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl~~ 222 (658)
.+.++....++++++|.|||+||++|+++.|.|+++++.+++.+.++.|||++++ .+|++++ |+++||+++
T Consensus 32 ~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~---~l~~~~~------v~~~Pt~~~ 102 (128)
T 3ul3_B 32 SNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNE---SLARKFS------VKSLPTIIL 102 (128)
T ss_dssp CSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCH---HHHHHTT------CCSSSEEEE
T ss_pred ccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCH---HHHHHcC------CCCcCEEEE
Confidence 3334444478999999999999999999999999999999887899999999554 5999999 889999999
Q ss_pred cCCCCCCCCCcccccCCCCHhHHHHHHHH
Q 006171 223 FPPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (658)
Q Consensus 223 f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k 251 (658)
|.+|.. ...+.|.++.++|.+|+.+
T Consensus 103 ~~~G~~----~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 103 LKNKTM----LARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp EETTEE----EEEESSCCCHHHHHHHHTT
T ss_pred EECCEE----EEEecCCCCHHHHHHHHHh
Confidence 987753 5678999999999999864
No 87
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.53 E-value=5.6e-15 Score=149.64 Aligned_cols=104 Identities=17% Similarity=0.200 Sum_probs=88.7
Q ss_pred eEEEecCCCCCccccCCCcEEEEEec--cCCCCCCCChHHHHHHHHHhhc--ccceeeeeccc--chhhhHHHhhCCCCc
Q 006171 137 AFNVVTSEDFPSIFHDSKPWLIQVYS--DGSYLCGQFSGAWKTIAALLEG--IANTGMVELGD--IRLATHLAERKPIGQ 210 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYa--pwC~~Ck~l~P~w~~~A~~l~g--~~~vg~Vdc~e--~~~~~~Lc~k~~i~k 210 (658)
.|+.||..||++++.++++|||.||| |||+ ++|.|+++|+.+.+ .+.|++|||++ -.....||++++
T Consensus 6 ~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~--- 78 (240)
T 2qc7_A 6 GALPLDTVTFYKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYK--- 78 (240)
T ss_dssp TCEECCTTHHHHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTT---
T ss_pred CceECCHHHHHHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcC---
Confidence 46899999999988888999999999 9999 99999999999974 46999999542 012345999999
Q ss_pred cccee--eeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 211 IFFRR--GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 211 ~f~V~--~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|+ +||||++|++|.. ..+..|.|.++.++|++|+.+.
T Consensus 79 ---V~~~~~PTl~~f~~G~~--~~~~~y~G~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 79 ---LDKESYPVFYLFRDGDF--ENPVPYTGAVKVGAIQRWLKGQ 117 (240)
T ss_dssp ---CCGGGCSEEEEEETTCS--SCCEECCSCSCHHHHHHHHHHT
T ss_pred ---CCCCCCCEEEEEeCCCc--CcceeecCCCCHHHHHHHHHHh
Confidence 99 9999999999861 1257899999999999999987
No 88
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.53 E-value=2.9e-15 Score=136.23 Aligned_cols=100 Identities=13% Similarity=0.097 Sum_probs=88.2
Q ss_pred EEEecC-CCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceee
Q 006171 138 FNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (658)
Q Consensus 138 V~~Lt~-~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~ 216 (658)
|..|+. ++|++.+.++++++|.|||+||++|+++.|.|+++++.+. .+.++.|||++++ .+|++++ |.+
T Consensus 21 v~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d~~~---~l~~~~~------v~~ 90 (125)
T 1r26_A 21 VVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDADNNS---EIVSKCR------VLQ 90 (125)
T ss_dssp CEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETTTCH---HHHHHTT------CCS
T ss_pred eEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCH---HHHHHcC------CCc
Confidence 688999 9999999888999999999999999999999999999984 4799999999554 5999999 889
Q ss_pred eeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
+||+++|.+|.. ...|.| .+.+.|.+++.+.
T Consensus 91 ~Pt~~i~~~G~~----~~~~~G-~~~~~l~~~l~~~ 121 (125)
T 1r26_A 91 LPTFIIARSGKM----LGHVIG-ANPGMLRQKLRDI 121 (125)
T ss_dssp SSEEEEEETTEE----EEEEES-SCHHHHHHHHHHH
T ss_pred ccEEEEEeCCeE----EEEEeC-CCHHHHHHHHHHH
Confidence 999999988753 456788 6889999999876
No 89
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.52 E-value=5.9e-15 Score=136.14 Aligned_cols=103 Identities=17% Similarity=0.177 Sum_probs=77.2
Q ss_pred ceEEEecCCCCCcccc-CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccce
Q 006171 136 HAFNVVTSEDFPSIFH-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (658)
Q Consensus 136 ~~V~~Lt~~nF~~~v~-~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V 214 (658)
..|..++.++|+..+. ++. ++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++ .+|++++ |
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~---~l~~~~~------v 102 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPL-TLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHP---GLAARYG------V 102 (140)
T ss_dssp ----------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCH---HHHHHTT------C
T ss_pred CccccCCHHHHHHHHHcCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCH---HHHHHCC------C
Confidence 3578899999999984 445 999999999999999999999999999877899999999554 5999999 8
Q ss_pred eeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 215 ~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
.++||+++|.+|.. ...|.|.++.+.|.+|+.+.
T Consensus 103 ~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~i~~~ 136 (140)
T 1v98_A 103 RSVPTLVLFRRGAP----VATWVGASPRRVLEERLRPY 136 (140)
T ss_dssp CSSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CccCEEEEEeCCcE----EEEEeCCCCHHHHHHHHHHH
Confidence 89999999987753 45689999999999999876
No 90
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.52 E-value=5.2e-15 Score=129.64 Aligned_cols=100 Identities=13% Similarity=0.177 Sum_probs=83.8
Q ss_pred EEEe-cCCCCCccc--cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccce
Q 006171 138 FNVV-TSEDFPSIF--HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (658)
Q Consensus 138 V~~L-t~~nF~~~v--~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V 214 (658)
|..+ +.++|++.+ .++++++|.||++||++|+++.|.|+++++.+ +.+.++.|||++++ .+|++++ |
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~~~~---~~~~~~~------v 72 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVHQCQ---GTAATNN------I 72 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSH---HHHHHTT------C
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECccCH---HHHHhcC------C
Confidence 4556 568899998 47899999999999999999999999999998 45799999999554 5999999 8
Q ss_pred eeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 215 ~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
+++||+++|++|.. ...|.|.. .++|.+|+.+.
T Consensus 73 ~~~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~l~~~ 105 (107)
T 1gh2_A 73 SATPTFQFFRNKVR----IDQYQGAD-AVGLEEKIKQH 105 (107)
T ss_dssp CSSSEEEEEETTEE----EEEEESSC-HHHHHHHHHHH
T ss_pred CcccEEEEEECCeE----EEEEeCCC-HHHHHHHHHHh
Confidence 89999999988753 45678854 56699998765
No 91
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.52 E-value=3.3e-15 Score=129.96 Aligned_cols=101 Identities=14% Similarity=0.215 Sum_probs=87.7
Q ss_pred EEEecC-CCCCcccc--CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccce
Q 006171 138 FNVVTS-EDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (658)
Q Consensus 138 V~~Lt~-~nF~~~v~--~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V 214 (658)
|..+++ ++|+..+. ++++++|.||++||++|+++.|.++++++.+++.+.+..|||++++ .+|++++ |
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~------v 72 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECE---DIAMEYN------I 72 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCH---HHHHHTT------C
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchH---HHHHHcC------C
Confidence 567888 88998885 7899999999999999999999999999999777799999999554 5999999 8
Q ss_pred eeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 215 ~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
.++||+++|++|.. ...|.| .+.+.|.+|+.+.
T Consensus 73 ~~~Pt~~~~~~G~~----~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 73 SSMPTFVFLKNGVK----VEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp CSSSEEEEEETTEE----EEEEES-CCHHHHHHHHHHT
T ss_pred CcccEEEEEcCCcE----EEEEcC-CCHHHHHHHHHHh
Confidence 89999999988753 456788 7889999998764
No 92
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.51 E-value=6.1e-15 Score=130.14 Aligned_cols=101 Identities=9% Similarity=0.129 Sum_probs=83.3
Q ss_pred EEEecC-CCCCccccC---CCcEEEEEeccCCCCCCCChHHHHHHHHHhh-cccceeeeecccchhhhHHHhhCCCCccc
Q 006171 138 FNVVTS-EDFPSIFHD---SKPWLIQVYSDGSYLCGQFSGAWKTIAALLE-GIANTGMVELGDIRLATHLAERKPIGQIF 212 (658)
Q Consensus 138 V~~Lt~-~nF~~~v~~---~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~-g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f 212 (658)
|..|+. ++|++.+.+ +++++|.||++||++|+.+.|.|+++++.++ +.+.+..|||++++ .+|++++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~----- 73 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENS---EISELFE----- 73 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCH---HHHHHTT-----
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCH---HHHHHcC-----
Confidence 577888 899998865 8999999999999999999999999999863 34699999999554 5999999
Q ss_pred ceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 213 ~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|.++||+++|.+|.. ...+.|.. .++|.+++.+.
T Consensus 74 -v~~~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~l~~~ 107 (112)
T 3d6i_A 74 -ISAVPYFIIIHKGTI----LKELSGAD-PKEYVSLLEDC 107 (112)
T ss_dssp -CCSSSEEEEEETTEE----EEEECSCC-HHHHHHHHHHH
T ss_pred -CCcccEEEEEECCEE----EEEecCCC-HHHHHHHHHHH
Confidence 889999999987753 45678875 55699998776
No 93
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.51 E-value=3.4e-15 Score=131.49 Aligned_cols=102 Identities=16% Similarity=0.245 Sum_probs=87.9
Q ss_pred eEEEe-cCCCCCccccC----CCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcc
Q 006171 137 AFNVV-TSEDFPSIFHD----SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (658)
Q Consensus 137 ~V~~L-t~~nF~~~v~~----~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~ 211 (658)
.|..+ +.++|++.+.. +++++|.||++||++|+.+.|.|+++++.+.+.+.+..|||++++ .+|++++
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~---- 75 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVA---AVAEAAG---- 75 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTH---HHHHHHT----
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchH---HHHHHcC----
Confidence 36777 45889998853 899999999999999999999999999999877799999999544 5999998
Q ss_pred cceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 212 f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|.++||+++|++|.. ...|.|. +.+.|.+|+.+.
T Consensus 76 --v~~~Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~ 109 (112)
T 1ep7_A 76 --ITAMPTFHVYKDGVK----ADDLVGA-SQDKLKALVAKH 109 (112)
T ss_dssp --CCBSSEEEEEETTEE----EEEEESC-CHHHHHHHHHHH
T ss_pred --CCcccEEEEEECCeE----EEEEcCC-CHHHHHHHHHHH
Confidence 889999999988753 4567898 899999999876
No 94
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.51 E-value=3.1e-15 Score=140.29 Aligned_cols=102 Identities=12% Similarity=0.073 Sum_probs=86.8
Q ss_pred EEEecC-CCCCccc--cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccce
Q 006171 138 FNVVTS-EDFPSIF--HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (658)
Q Consensus 138 V~~Lt~-~nF~~~v--~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V 214 (658)
|..|+. ++|++.| .++++++|.|||+||++|+.++|.++++|+++++.+.|++||.++++. ++++|+ |
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e---~a~~y~------V 93 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPD---FNTMYE------L 93 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCT---TTTTTT------C
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHH---HHHHcC------C
Confidence 445655 7899888 378899999999999999999999999999998888999999997664 889998 8
Q ss_pred eeeeEEEEcCCCCCCCCCc--c-------cccCCCC-HhHHHHHHHHh
Q 006171 215 RGLPSLVAFPPGCKSSDCM--T-------RFEGELS-VDAVTDWFATA 252 (658)
Q Consensus 215 ~~yPTl~~f~~g~~~~~~~--~-------~Y~G~rs-~~~Lv~fv~k~ 252 (658)
++.||+++|.+|.. . . ...|... .+.|.+++.+.
T Consensus 94 ~siPT~~fFk~G~~----v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~ 137 (160)
T 2av4_A 94 YDPVSVMFFYRNKH----MMIDLGTGNNNKINWPMNNKQEFIDIVETI 137 (160)
T ss_dssp CSSEEEEEEETTEE----EEEECSSSCCSCBCSCCCCHHHHHHHHHHH
T ss_pred CCCCEEEEEECCEE----EEEecCCCCcCeEEeecCCHHHHHHHHHHH
Confidence 89999999998864 2 1 4678776 88899988765
No 95
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.51 E-value=1.9e-13 Score=137.13 Aligned_cols=201 Identities=7% Similarity=0.035 Sum_probs=147.7
Q ss_pred EEEe-cCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceee
Q 006171 138 FNVV-TSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (658)
Q Consensus 138 V~~L-t~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~ 216 (658)
+..| |.++|++.+.++++++|.||++| |..+.++|.++|+.+ ....+|.+.- ..+|++++ |++
T Consensus 11 ~~~l~s~~~~~~~l~~~~v~vVgff~~~---~~~~~~~f~~~A~~l-~~~~F~~t~~------~~v~~~~~------v~~ 74 (227)
T 4f9z_D 11 PTWLTDVPAAMEFIAATEVAVIGFFQDL---EIPAVPILHSMVQKF-PGVSFGISTD------SEVLTHYN------ITG 74 (227)
T ss_dssp CEECCSHHHHHHHHHTSSEEEEEECSCS---CSTHHHHHHHHTTTC-TTSEEEEECC------HHHHHHTT------CCS
T ss_pred CeeeCCHHHHHHHHhcCCeEEEEEecCC---CchhHHHHHHHHHhC-CCceEEEECC------HHHHHHcC------CCC
Confidence 4566 45889988888999999999998 568999999999999 4668877542 24889998 888
Q ss_pred eeEEEEcCCCCCCCCCccccc----CCCCHhHHHHHHHHhhccCCcceeeccchhhhhhhhhcCCCcEEEEEEeCC-CC-
Q 006171 217 LPSLVAFPPGCKSSDCMTRFE----GELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKT-GE- 290 (658)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~----G~rs~~~Lv~fv~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~~~-~~- 290 (658)
|+|++|++... ....|. |.++.++|.+|+... .+|.+..++.++ ...+.... ....+++|.+. ++
T Consensus 75 -p~i~lfk~~~~---~~~~~~~~~~g~~~~~~l~~fi~~~--~~plv~e~t~~n-~~~~~~~~--~~~~~l~f~~~~~~~ 145 (227)
T 4f9z_D 75 -NTICLFRLVDN---EQLNLEDEDIESIDATKLSRFIEIN--SLHMVTEYNPVT-VIGLFNSV--IQIHLLLIMNKASPE 145 (227)
T ss_dssp -SEEEEEETTTT---EEEEECHHHHHTCCHHHHHHHHHHH--CCCSEEECCHHH-HHHHHHSS--CCEEEEEEECTTSTT
T ss_pred -CeEEEEEecCc---ccccccccccCCCCHHHHHHHHHHh--CCCceeecCccc-HHHHhccC--CceEEEEEEcCCcch
Confidence 99999997542 246777 489999999999988 467776677666 44444322 23445566432 21
Q ss_pred C--CcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCC--CCCEEEEEeCCCCCeeee-cCCCChHHHHHHHHhh
Q 006171 291 R--ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVE--SAPAIVFLKDPGVKPVVY-YGSFNNSRLSEVMEQN 363 (658)
Q Consensus 291 ~--~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~--~~Ptlvlfk~~~~~p~~y-~g~~~~~~L~~fi~~~ 363 (658)
+ ..+.++.+|..|++.+.|+++...+.....+.+.||+. .+|+|+++...+.+...+ .+.++.+.|.+|++..
T Consensus 146 ~~~~~~~~~~vAk~~k~~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~ 223 (227)
T 4f9z_D 146 YEENMHRYQKAAKLFQGKILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGF 223 (227)
T ss_dssp HHHHHHHHHHHHHHTTTTCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHH
Confidence 1 23566779999999999999875433345678999998 699999998654432223 4788999999999763
No 96
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.50 E-value=4.3e-15 Score=131.23 Aligned_cols=99 Identities=15% Similarity=0.281 Sum_probs=85.6
Q ss_pred EEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeee
Q 006171 139 NVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLP 218 (658)
Q Consensus 139 ~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yP 218 (658)
...+.++|+..+.++++++|.|||+||++|+++.|.|+++++++.+ +.+..|||++++ .+|++++ |+++|
T Consensus 10 ~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd~~~~~---~l~~~~~------v~~~P 79 (109)
T 3f3q_A 10 QFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVDELG---DVAQKNE------VSAMP 79 (109)
T ss_dssp ECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCH---HHHHHTT------CCSSS
T ss_pred CCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCCCH---HHHHHcC------CCccC
Confidence 4466788999998899999999999999999999999999999865 799999999554 5999999 88999
Q ss_pred EEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 219 SLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 219 Tl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|+++|.+|.. ...+.|. +.+.|.+++.+.
T Consensus 80 t~~~~~~G~~----~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 80 TLLLFKNGKE----VAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp EEEEEETTEE----EEEEESS-CHHHHHHHHHHH
T ss_pred EEEEEECCEE----EEEEeCC-CHHHHHHHHHhh
Confidence 9999997753 4667888 679999998764
No 97
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.25 E-value=1.6e-15 Score=131.31 Aligned_cols=102 Identities=21% Similarity=0.294 Sum_probs=88.9
Q ss_pred EEEecCCCCCccc-cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceee
Q 006171 138 FNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (658)
Q Consensus 138 V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~ 216 (658)
|..||.++|++.+ .++++++|.||++||++|+++.|.++++++.+.+.+.+..|||+++. .+|++++ |.+
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~------v~~ 73 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENP---NTAAQYG------IRS 73 (106)
Confidence 5789999999877 77899999999999999999999999999999877899999999544 4888888 889
Q ss_pred eeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
+||+++|.+|.. ...|.|..+.+.|.+|+.+.
T Consensus 74 ~Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 74 IPTLLLFKNGQV----VDRLVGAQPKEALKERIDKH 105 (106)
Confidence 999999977753 45788999999999988654
No 98
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.49 E-value=4.9e-15 Score=128.73 Aligned_cols=96 Identities=13% Similarity=0.220 Sum_probs=83.7
Q ss_pred cCCCCCcccc--CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeeeE
Q 006171 142 TSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPS 219 (658)
Q Consensus 142 t~~nF~~~v~--~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPT 219 (658)
+.++|++.+. ++++++|.||++||++|+++.|.|+++++.+.+ +.+..|||++++ .+|++++ |+++||
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~~---~~~~~~~------v~~~Pt 76 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQ---DVASESE------VKSMPT 76 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTTCH---HHHHHTT------CCBSSE
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhhhH---HHHHHcC------CCcCcE
Confidence 4567888885 789999999999999999999999999999876 899999999554 5999999 889999
Q ss_pred EEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 220 LVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 220 l~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
+++|.+|.. ...|.|. +.+.|.+++.+.
T Consensus 77 ~~~~~~g~~----~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 77 FQFFKKGQK----VGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp EEEEETTEE----EEEEESS-CHHHHHHHHHHH
T ss_pred EEEEECCeE----EEEEeCC-CHHHHHHHHHHh
Confidence 999988754 4568898 999999998765
No 99
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.49 E-value=1.2e-14 Score=130.85 Aligned_cols=102 Identities=14% Similarity=0.199 Sum_probs=87.5
Q ss_pred ceEEEecCCCCCcccc--CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecc-cchhhhHHHhhCCCCccc
Q 006171 136 HAFNVVTSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG-DIRLATHLAERKPIGQIF 212 (658)
Q Consensus 136 ~~V~~Lt~~nF~~~v~--~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~-e~~~~~~Lc~k~~i~k~f 212 (658)
..|..++.++|++.+. ++++++|.||++||++|+++.|.++++++++.+ +.+..|||+ +++ .+|++++
T Consensus 18 ~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~---~~~~~~~----- 88 (124)
T 1faa_A 18 GKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD-VIFLKLDCNQENK---TLAKELG----- 88 (124)
T ss_dssp TSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTH---HHHHHHC-----
T ss_pred CceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC-CEEEEEecCcchH---HHHHHcC-----
Confidence 3578999999999884 789999999999999999999999999998875 689999998 343 4899998
Q ss_pred ceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 213 ~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|+++||+++|++|.. ...+.|.. .+.|.+++.+.
T Consensus 89 -v~~~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 89 -IRVVPTFKILKENSV----VGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp -CSSSSEEEEEETTEE----EEEEESSC-HHHHHHHHHHH
T ss_pred -CCeeeEEEEEeCCcE----EEEEcCCC-HHHHHHHHHHh
Confidence 889999999988853 45678876 89999998765
No 100
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.49 E-value=1.1e-12 Score=131.40 Aligned_cols=204 Identities=20% Similarity=0.300 Sum_probs=144.1
Q ss_pred eccchhhhhhhhhcCCCcEEEE-EEeCCCCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCC
Q 006171 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP 340 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl-~f~~~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~ 340 (658)
+++.+.++.|++.. .+.|| ||.+.+....+.+..+|..++ .+.|+.+. .++++++|+++. |+|++|+..
T Consensus 14 l~s~~~~~~~l~~~---~v~vVgff~~~~~~~~~~f~~~A~~l~-~~~F~~t~-----~~~v~~~~~v~~-p~i~lfk~~ 83 (227)
T 4f9z_D 14 LTDVPAAMEFIAAT---EVAVIGFFQDLEIPAVPILHSMVQKFP-GVSFGIST-----DSEVLTHYNITG-NTICLFRLV 83 (227)
T ss_dssp CCSHHHHHHHHHTS---SEEEEEECSCSCSTHHHHHHHHTTTCT-TSEEEEEC-----CHHHHHHTTCCS-SEEEEEETT
T ss_pred eCCHHHHHHHHhcC---CeEEEEEecCCCchhHHHHHHHHHhCC-CceEEEEC-----CHHHHHHcCCCC-CeEEEEEec
Confidence 44544478887643 35454 666555455677888888884 78888753 467999999986 999999987
Q ss_pred CCCeeeecC----CCChHHHHHHHHhhccCCCccccCcchhhhcccccCCcCCCCCCcccEEEEEEcC-CChhHHHHHHH
Q 006171 341 GVKPVVYYG----SFNNSRLSEVMEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGR-LSPELNKMRET 415 (658)
Q Consensus 341 ~~~p~~y~g----~~~~~~L~~fi~~~~~~~vP~lts~~~~~~~c~~~~~~~~~k~~~~~lcVi~~~~-~~~~~~~~~~~ 415 (658)
+.++..|.| .++.+.|.+||+.+.+|++++++..+..+ .+.. +. .++++++.+ ...+.+++++.
T Consensus 84 ~~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t~~n~~~-~~~~------~~----~~~~l~f~~~~~~~~~~~~~~ 152 (227)
T 4f9z_D 84 DNEQLNLEDEDIESIDATKLSRFIEINSLHMVTEYNPVTVIG-LFNS------VI----QIHLLLIMNKASPEYEENMHR 152 (227)
T ss_dssp TTEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEECCHHHHHH-HHHS------SC----CEEEEEEECTTSTTHHHHHHH
T ss_pred CcccccccccccCCCCHHHHHHHHHHhCCCceeecCcccHHH-Hhcc------CC----ceEEEEEEcCCcchHHHHHHH
Confidence 777878874 78999999999999999999999988654 2311 11 255565654 34567788888
Q ss_pred HHHHHHhhccccccccccccCCchHHHHhcCCCcEEEEEEecc--chHHHHHHHcccCCcccccCCcCCCCCCCeEEEEE
Q 006171 416 IRRVQETLLSDDESNAADTDQSLAPAAVAFRNKRLTFAWLDGE--AQDRYCSFYLFSETSFETCGARRDMSDVPRLFIVR 493 (658)
Q Consensus 416 lr~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~~v~F~wvd~~--~q~~~~~~f~~~~~~~~~c~~~~~~~~~p~vvI~~ 493 (658)
++.+|+ .++++ +.|+|+|++ ...+.++.|-... .+.|.|+|+
T Consensus 153 ~~~vAk----------------------~~k~~-i~F~~vd~~~~~~~~~l~~fgl~~------------~~~P~~~i~- 196 (227)
T 4f9z_D 153 YQKAAK----------------------LFQGK-ILFILVDSGMKENGKVISFFKLKE------------SQLPALAIY- 196 (227)
T ss_dssp HHHHHH----------------------HTTTT-CEEEEEETTSGGGHHHHHHTTCCG------------GGCSEEEEE-
T ss_pred HHHHHH----------------------HhhCC-EEEEEeCCccHhHHHHHHHcCCCc------------ccCCEEEEE-
Confidence 888877 67665 999999995 4567888772221 145999998
Q ss_pred eecCCccccceeccccCcccccccccccCccccchhccCCCCChhHHHHHHHHHhh
Q 006171 494 YKRNTTEDEAKIERKPRNIWDAMQEQEVDPASQLVVRYNGSDEIPQIAKWVSEIIQ 549 (658)
Q Consensus 494 ~~~n~~~~~~k~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~ 549 (658)
|.... .+|. + +.+ .-+.+.|.+||.+++.
T Consensus 197 ---~~~~~-~ky~------~---~~~--------------~~t~~~i~~Fv~~~~~ 225 (227)
T 4f9z_D 197 ---QTLDD-EWDT------L---PTA--------------EVSVEHVQNFCDGFLS 225 (227)
T ss_dssp ---ESSSC-CEEE------E---TTC--------------CCCHHHHHHHHHHHHT
T ss_pred ---ECCCC-cccc------C---CcC--------------CCCHHHHHHHHHHHhC
Confidence 54331 2343 1 211 2256899999999997
No 101
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.49 E-value=7.1e-15 Score=131.79 Aligned_cols=101 Identities=15% Similarity=0.204 Sum_probs=88.4
Q ss_pred eEEEecCCCCCccc-c---CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCccc
Q 006171 137 AFNVVTSEDFPSIF-H---DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v-~---~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f 212 (658)
.+..++.++|+..+ . .+++++|.||++||++|+.+.|.|+++++++.+ +.+..|||++++ .+|++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~---~~~~~~~----- 84 (122)
T 2vlu_A 14 VISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELK---PIAEQFS----- 84 (122)
T ss_dssp CEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCH---HHHHHTT-----
T ss_pred ceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCH---HHHHHcC-----
Confidence 35677889999988 3 589999999999999999999999999999887 899999999554 5999999
Q ss_pred ceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 213 ~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|+++||+++|++|.. ...|.|.. .+.|.+|+.+.
T Consensus 85 -v~~~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 85 -VEAMPTFLFMKEGDV----KDRVVGAI-KEELTAKVGLH 118 (122)
T ss_dssp -CCSSSEEEEEETTEE----EEEEESSC-HHHHHHHHHHH
T ss_pred -CCcccEEEEEeCCEE----EEEEeCcC-HHHHHHHHHHH
Confidence 889999999988753 45788998 99999999876
No 102
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.49 E-value=2.4e-15 Score=134.52 Aligned_cols=101 Identities=13% Similarity=0.180 Sum_probs=82.3
Q ss_pred EEEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccc---hhhhHHHhhCCCCcccce
Q 006171 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI---RLATHLAERKPIGQIFFR 214 (658)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~---~~~~~Lc~k~~i~k~f~V 214 (658)
+..++.++|+..+.++++++|.||||||++|+++.|.|+++++.+.. .+..+|++.. .....++++++ |
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~------i 85 (118)
T 1zma_A 14 LEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKA--HIYFINSEEPSQLNDLQAFRSRYG------I 85 (118)
T ss_dssp SEECCHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC--CCEEEETTCGGGHHHHHHHHHHHT------C
T ss_pred hhcCCHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC--eEEEEECCCcCcHHHHHHHHHHcC------C
Confidence 46788889998887788999999999999999999999999998764 4445554421 13345889998 8
Q ss_pred eeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHH
Q 006171 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFA 250 (658)
Q Consensus 215 ~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~ 250 (658)
.++||+++|.+|.. ...+.|.++.+.|.+|+.
T Consensus 86 ~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 86 PTVPGFVHITDGQI----NVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp CSSCEEEEEETTEE----EEECCTTCCHHHHHHHHT
T ss_pred CCCCeEEEEECCEE----EEEecCCCCHHHHHHHhh
Confidence 89999999988754 467899999999999974
No 103
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.48 E-value=8.3e-15 Score=130.59 Aligned_cols=100 Identities=16% Similarity=0.240 Sum_probs=86.4
Q ss_pred eEEEecC-CCCCcccc--CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccc
Q 006171 137 AFNVVTS-EDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (658)
Q Consensus 137 ~V~~Lt~-~nF~~~v~--~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~ 213 (658)
.|..++. ++|+..+. ++++++|.||++||++|+++.|.|+++++.+ .+.++.|||++++ .+|++++
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~~---~~~~~~~------ 82 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKLE---ETARKYN------ 82 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTSH---HHHHHTT------
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCccH---HHHHHcC------
Confidence 3788998 89999885 7899999999999999999999999999887 5689999999554 5999999
Q ss_pred eeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 214 V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|+++||+++|++|.. ...+.| .+.+.|.+++.+.
T Consensus 83 v~~~Pt~~~~~~G~~----~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 83 ISAMPTFIAIKNGEK----VGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp CCSSSEEEEEETTEE----EEEEES-SCHHHHHHHHHHH
T ss_pred CCccceEEEEeCCcE----EEEEeC-CCHHHHHHHHHHh
Confidence 889999999988753 456788 6889999998764
No 104
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.48 E-value=2.4e-14 Score=129.25 Aligned_cols=101 Identities=14% Similarity=0.143 Sum_probs=86.3
Q ss_pred EEecCCCCC-----ccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeee--cccchhhhHHHhhCCCCcc
Q 006171 139 NVVTSEDFP-----SIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVE--LGDIRLATHLAERKPIGQI 211 (658)
Q Consensus 139 ~~Lt~~nF~-----~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vd--c~e~~~~~~Lc~k~~i~k~ 211 (658)
..++..+|+ .....+++++|.||++||++|+.+.|.++++++.+++.+.+..|| ++++ ..++++++
T Consensus 7 ~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~---~~~~~~~~---- 79 (126)
T 2l57_A 7 KQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKN---IDLAYKYD---- 79 (126)
T ss_dssp SCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHH---HHHHHHTT----
T ss_pred CCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCch---HHHHHHcC----
Confidence 456777777 445678999999999999999999999999999998667999999 8844 45999999
Q ss_pred cceeeeeEEEEcC-CCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 212 FFRRGLPSLVAFP-PGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 212 f~V~~yPTl~~f~-~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|.++||+++|. +|.. ...|.|..+.+.|.+++.+.
T Consensus 80 --v~~~Pt~~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 115 (126)
T 2l57_A 80 --ANIVPTTVFLDKEGNK----FYVHQGLMRKNNIETILNSL 115 (126)
T ss_dssp --CCSSSEEEEECTTCCE----EEEEESCCCHHHHHHHHHHH
T ss_pred --CcceeEEEEECCCCCE----EEEecCCCCHHHHHHHHHHH
Confidence 88999999998 5543 45688999999999999887
No 105
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.48 E-value=1.5e-14 Score=127.95 Aligned_cols=99 Identities=13% Similarity=0.157 Sum_probs=85.5
Q ss_pred EEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeee
Q 006171 139 NVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLP 218 (658)
Q Consensus 139 ~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yP 218 (658)
..++.++| +.+.++++++|.||++||++|+.+.|.|+++++.+. .+.+..||+++++ .+|++++ |+++|
T Consensus 6 ~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~~---~l~~~~~------v~~~P 74 (110)
T 2l6c_A 6 DITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSEARP---ELMKELG------FERVP 74 (110)
T ss_dssp BCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGGGCH---HHHHHTT------CCSSC
T ss_pred ecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCcCCH---HHHHHcC------CcccC
Confidence 45788999 677778999999999999999999999999998875 4699999999544 5999999 88999
Q ss_pred EEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 219 SLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 219 Tl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|+++|++|.. ...+.|..+.+.|.+++.+.
T Consensus 75 t~~~~~~G~~----v~~~~G~~~~~~l~~~~~~~ 104 (110)
T 2l6c_A 75 TLVFIRDGKV----AKVFSGIMNPRELQALYASI 104 (110)
T ss_dssp EEEEEESSSE----EEEEESCCCHHHHHHHHHTC
T ss_pred EEEEEECCEE----EEEEcCCCCHHHHHHHHHHH
Confidence 9999987753 46788999999999998776
No 106
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.48 E-value=5.9e-15 Score=135.70 Aligned_cols=102 Identities=16% Similarity=0.198 Sum_probs=88.6
Q ss_pred eEEEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccc------hhhhHHHhhCCCCc
Q 006171 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI------RLATHLAERKPIGQ 210 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~------~~~~~Lc~k~~i~k 210 (658)
.+..+|.++|++.+.+ +++|.|||+||++|+++.|.|++++++++ +.+..|||++. .....+|++++
T Consensus 17 ~v~~l~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~~~--- 89 (135)
T 3emx_A 17 RLIYITPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNKAG--- 89 (135)
T ss_dssp EEEECCHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHHHT---
T ss_pred ceeecCHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHHcC---
Confidence 6789999999998866 99999999999999999999999999886 89999999211 14456899998
Q ss_pred ccceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 211 IFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 211 ~f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|.++||+++|.+|.. ...+.|..+.+.+..++++.
T Consensus 90 ---v~~~Pt~~~~~~G~~----v~~~~G~~~~~~~~~~i~~~ 124 (135)
T 3emx_A 90 ---VEGTPTLVFYKEGRI----VDKLVGATPWSLKVEKAREI 124 (135)
T ss_dssp ---CCSSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred ---CceeCeEEEEcCCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 889999999998854 46789999999999999887
No 107
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.48 E-value=6.9e-15 Score=130.21 Aligned_cols=100 Identities=11% Similarity=0.244 Sum_probs=87.9
Q ss_pred EEEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeee
Q 006171 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (658)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~y 217 (658)
...+|.++|++.++++++++|.||++||++|+++.|.++++++.+.+ +.+..|||++++ .+|++++ |.++
T Consensus 11 ~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~-v~~~~vd~~~~~---~~~~~~~------v~~~ 80 (112)
T 1syr_A 11 KIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK-MVFIKVDVDEVS---EVTEKEN------ITSM 80 (112)
T ss_dssp EEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTTH---HHHHHTT------CCSS
T ss_pred EEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CEEEEEECCCCH---HHHHHcC------CCcc
Confidence 47789999999998889999999999999999999999999998864 799999999554 5999999 8899
Q ss_pred eEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
||+++|.+|.. ...+.|. +.+.|.+|+.+.
T Consensus 81 Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 81 PTFKVYKNGSS----VDTLLGA-NDSALKQLIEKY 110 (112)
T ss_dssp SEEEEEETTEE----EEEEESC-CHHHHHHHHHTT
T ss_pred cEEEEEECCcE----EEEEeCC-CHHHHHHHHHHh
Confidence 99999987753 4567898 999999998765
No 108
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.47 E-value=6.5e-15 Score=138.21 Aligned_cols=99 Identities=17% Similarity=0.203 Sum_probs=86.4
Q ss_pred ecCCCCCccc--cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeee
Q 006171 141 VTSEDFPSIF--HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLP 218 (658)
Q Consensus 141 Lt~~nF~~~v--~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yP 218 (658)
.+.++|+..+ .++++++|.|||+||++|+.+.|.++++++++.+.+.++.||+++++ .+|++++ |.++|
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~---~l~~~~~------v~~~P 79 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTA---VYTQYFD------ISYIP 79 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCC---HHHHHTT------CCSSS
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCH---HHHHHcC------CCccC
Confidence 4567888888 56899999999999999999999999999999887899999999554 4999999 88999
Q ss_pred EEEEcCCCCCCCCCc---------ccccC-CCCHhHHHHHHHHh
Q 006171 219 SLVAFPPGCKSSDCM---------TRFEG-ELSVDAVTDWFATA 252 (658)
Q Consensus 219 Tl~~f~~g~~~~~~~---------~~Y~G-~rs~~~Lv~fv~k~ 252 (658)
|+++|.+|.. . ..+.| ..+.+.|.+++.+.
T Consensus 80 t~~~~~~G~~----v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~ 119 (149)
T 3gix_A 80 STVFFFNGQH----MKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119 (149)
T ss_dssp EEEEEETTEE----EEEECSSSCCSCEESCCSSHHHHHHHHHHH
T ss_pred eEEEEECCeE----EEeecCCCCCCeEeeecCCHHHHHHHHHHH
Confidence 9999998854 3 46789 89999999998775
No 109
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.47 E-value=3.5e-15 Score=157.56 Aligned_cols=67 Identities=24% Similarity=0.442 Sum_probs=0.0
Q ss_pred ccCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCC--ChHHHHHHHHHHHHHcCChhhhhcccccCch
Q 006171 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRNYDVYGID 102 (658)
Q Consensus 36 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~--~~~~~f~~i~~Aye~L~d~~~R~~YD~~g~~ 102 (658)
..|||++|||+++|+.+|||+|||+|+++||||+|+ .+.++|++|++||++|+||.+|+.||+|+..
T Consensus 27 ~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 95 (329)
T 3lz8_A 27 LKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQH 95 (329)
T ss_dssp ---------------------------------------------------------------------
T ss_pred ccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhcc
Confidence 469999999999999999999999999999999876 4677899999999999999999999999544
No 110
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.47 E-value=9.3e-15 Score=124.63 Aligned_cols=61 Identities=10% Similarity=0.078 Sum_probs=55.3
Q ss_pred ccCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC----hHHHHHHHHHHHHHcCChhhhhcc
Q 006171 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP----STADFLKIQYAYELLTDPLWKRNY 96 (658)
Q Consensus 36 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~~----~~~~f~~i~~Aye~L~d~~~R~~Y 96 (658)
..++|+||||+++|+.+|||+|||+|+++||||+++. +.++|++|++||++|+|...|..+
T Consensus 15 ~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~~ 79 (88)
T 1iur_A 15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQN 79 (88)
T ss_dssp HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSSS
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 5689999999999999999999999999999999985 467899999999999998777443
No 111
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.45 E-value=1.8e-14 Score=124.77 Aligned_cols=99 Identities=12% Similarity=0.262 Sum_probs=84.4
Q ss_pred EEecC-CCCCcccc--CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCccccee
Q 006171 139 NVVTS-EDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (658)
Q Consensus 139 ~~Lt~-~nF~~~v~--~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~ 215 (658)
..+++ ++|++.+. ++++++|.||++||++|+.+.|.++++++.+. .+.++.|||++++ .+|++++ |.
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~---~~~~~~~------v~ 71 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQNE---EAAAKYS------VT 71 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCH---HHHHHTT------CC
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccCCH---HHHHHcC------Cc
Confidence 45666 78888885 78999999999999999999999999999886 4699999999554 5999999 88
Q ss_pred eeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 216 ~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
++||+++|.+|.. ...+.| .+.+.|.+|+.+.
T Consensus 72 ~~Pt~~~~~~g~~----~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 72 AMPTFVFIKDGKE----VDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp SSSEEEEEETTEE----EEEEES-SCHHHHHHHHHHH
T ss_pred cccEEEEEeCCcE----EEEEeC-CCHHHHHHHHHhh
Confidence 9999999987753 456788 6899999998764
No 112
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.45 E-value=1.9e-14 Score=138.60 Aligned_cols=64 Identities=14% Similarity=0.282 Sum_probs=58.1
Q ss_pred ccCcccccCccCCCC--HHHHHHHHHHHHHhcCCCCCCC--------hHHHHHHHHHHHHHcCChhhhhccccc
Q 006171 36 PPSHYDALGIKPYSS--VEQVKEAYEKFSSKWNSGEEIP--------STADFLKIQYAYELLTDPLWKRNYDVY 99 (658)
Q Consensus 36 ~~d~Y~iLgv~~~a~--~~eIk~ayr~l~~~~HPD~~~~--------~~~~f~~i~~Aye~L~d~~~R~~YD~~ 99 (658)
+.|||+||||+++++ .++||+|||+|+++||||++++ +.+.|..|++||++|+||.+|+.||..
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 579999999999998 9999999999999999999763 236799999999999999999999974
No 113
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.45 E-value=2.5e-14 Score=128.72 Aligned_cols=102 Identities=17% Similarity=0.273 Sum_probs=88.3
Q ss_pred eEEEecC-CCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchhhhHHHhhCCCCcccce
Q 006171 137 AFNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIGQIFFR 214 (658)
Q Consensus 137 ~V~~Lt~-~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V 214 (658)
.+..+++ ++|++.+.++++++|.||++||++|+.+.|.|+++++.+.+. +.+..|||++++ .+|++++ |
T Consensus 16 ~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~---~~~~~~~------v 86 (121)
T 2j23_A 16 SVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQS---QIAQEVG------I 86 (121)
T ss_dssp CEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCH---HHHHHHT------C
T ss_pred ceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCH---HHHHHcC------C
Confidence 3566666 889998888899999999999999999999999999998876 799999999554 4899998 8
Q ss_pred eeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 215 ~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
.++||+++|.+|.. ...|.|. +.+.|.+|+.+.
T Consensus 87 ~~~Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~ 119 (121)
T 2j23_A 87 RAMPTFVFFKNGQK----IDTVVGA-DPSKLQAAITQH 119 (121)
T ss_dssp CSSSEEEEEETTEE----EEEEESS-CHHHHHHHHHHH
T ss_pred CcccEEEEEECCeE----EeeEcCC-CHHHHHHHHHHh
Confidence 89999999987753 4567898 899999999876
No 114
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.45 E-value=1.3e-14 Score=129.41 Aligned_cols=98 Identities=11% Similarity=0.173 Sum_probs=82.7
Q ss_pred EEecC-CCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeee
Q 006171 139 NVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (658)
Q Consensus 139 ~~Lt~-~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~y 217 (658)
..+++ ++|++.+.++++++|.||++||++|+++.|.|+++++++.+ +.+..|||++++ .+|++++ |.++
T Consensus 15 ~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~---~l~~~~~------v~~~ 84 (114)
T 2oe3_A 15 TKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESP---DIAKECE------VTAM 84 (114)
T ss_dssp CBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCH---HHHHHTT------CCSB
T ss_pred eecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCH---HHHHHCC------CCcc
Confidence 44554 45666677889999999999999999999999999999877 899999999554 4999998 8899
Q ss_pred eEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHH
Q 006171 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (658)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k 251 (658)
||+++|++|.. ...|.|.. .+.|.+++.+
T Consensus 85 Pt~~~~~~G~~----~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 85 PTFVLGKDGQL----IGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp SEEEEEETTEE----EEEEESSC-HHHHHHHHHT
T ss_pred cEEEEEeCCeE----EEEEeCCC-HHHHHHHHHh
Confidence 99999988753 45688988 8999998764
No 115
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.44 E-value=5.4e-14 Score=157.30 Aligned_cols=104 Identities=15% Similarity=0.263 Sum_probs=89.6
Q ss_pred ceEEEecCCCCCccc-cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhh-c--ccceeeeecccchhhhHHHhhCCCCcc
Q 006171 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE-G--IANTGMVELGDIRLATHLAERKPIGQI 211 (658)
Q Consensus 136 ~~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~-g--~~~vg~Vdc~e~~~~~~Lc~k~~i~k~ 211 (658)
..|..|+.++|+..+ ++++++||.||||||+||+.+.|.|+++++.++ + .+.++.|||+.+. +.. ++
T Consensus 358 ~~v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~----~~~-~~---- 428 (504)
T 2b5e_A 358 SSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTEND----VRG-VV---- 428 (504)
T ss_dssp CSEEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCC----CSS-CC----
T ss_pred ccceecccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccc----ccc-CC----
Confidence 468999999999988 678999999999999999999999999999987 3 4589999999654 222 56
Q ss_pred cceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 212 f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|++|||+++|++|.. .....|.|.++.++|++|+.+.
T Consensus 429 --v~~~Pt~~~~~~G~~--~~~~~~~G~~~~~~l~~~i~~~ 465 (504)
T 2b5e_A 429 --IEGYPTIVLYPGGKK--SESVVYQGSRSLDSLFDFIKEN 465 (504)
T ss_dssp --CSSSSEEEEECCTTS--CCCCBCCSCCCHHHHHHHHHHH
T ss_pred --ceecCeEEEEeCCce--ecceEecCCCCHHHHHHHHHhc
Confidence 999999999988853 1257899999999999999987
No 116
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.43 E-value=5.5e-14 Score=134.99 Aligned_cols=61 Identities=18% Similarity=0.254 Sum_probs=56.6
Q ss_pred ccCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC------hHHHHHHHHHHHHHcCChhhhhcc
Q 006171 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP------STADFLKIQYAYELLTDPLWKRNY 96 (658)
Q Consensus 36 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~~------~~~~f~~i~~Aye~L~d~~~R~~Y 96 (658)
..|+|++|||++.|+.++||+|||+|+++||||++++ +.++|++|++||++|+||.+|+.|
T Consensus 116 ~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 116 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp TCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 3699999999999999999999999999999998763 456899999999999999999987
No 117
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.43 E-value=4e-14 Score=121.16 Aligned_cols=53 Identities=17% Similarity=0.290 Sum_probs=48.7
Q ss_pred cCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC------hHHHHHHHHHHHHHcCC
Q 006171 37 PSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP------STADFLKIQYAYELLTD 89 (658)
Q Consensus 37 ~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~~------~~~~f~~i~~Aye~L~d 89 (658)
.++|++|||++.|+.++||+|||+++++||||+|++ +.++|++|++||++|.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 589999999999999999999999999999999874 45679999999999974
No 118
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.43 E-value=1.3e-14 Score=159.60 Aligned_cols=105 Identities=21% Similarity=0.354 Sum_probs=88.6
Q ss_pred ceEEEecCCCCCcccc--CCCcEEEEEeccCCCCCCCChHHHHHHHHHhh---c-----ccceeeeecccchhhhHHHhh
Q 006171 136 HAFNVVTSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE---G-----IANTGMVELGDIRLATHLAER 205 (658)
Q Consensus 136 ~~V~~Lt~~nF~~~v~--~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~---g-----~~~vg~Vdc~e~~~~~~Lc~k 205 (658)
+.|..||.++|+..+. .++++||+||||||++|+++.|.|+++++.+. + .+.|++|||++++ .+|++
T Consensus 23 ~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~---~la~~ 99 (470)
T 3qcp_A 23 SSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEV---DLCRK 99 (470)
T ss_dssp TTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCH---HHHHH
T ss_pred CCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCH---HHHHH
Confidence 4689999999999984 34799999999999999999999999999997 3 4799999999554 59999
Q ss_pred CCCCcccceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 206 KPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 206 ~~i~k~f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
++ |.++||+++|.+|.. .....|.|.++.+.| .|+.+.
T Consensus 100 y~------V~~~PTlilf~~gg~--~~~~~y~G~r~~e~L-~fI~k~ 137 (470)
T 3qcp_A 100 YD------INFVPRLFFFYPRDS--CRSNEECGTSSLEHV-AFENSH 137 (470)
T ss_dssp TT------CCSSCEEEEEEESSC--CCTTSCCCCCCEEEE-ECSCTT
T ss_pred cC------CCccCeEEEEECCCc--eEEEEeeCCCCHHHH-HHHHHh
Confidence 99 889999999976543 235789999988877 666554
No 119
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.43 E-value=2.5e-14 Score=129.09 Aligned_cols=99 Identities=11% Similarity=0.173 Sum_probs=79.6
Q ss_pred eEEEecCCCCCccc-cCCC--cEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccc
Q 006171 137 AFNVVTSEDFPSIF-HDSK--PWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~--~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~ 213 (658)
.|.++|.++|.+.| ++.+ +++|.||||||++|+.+.|.++++|+++. .++|.+||+++. +++++
T Consensus 4 ~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd~d~~------~~~~~------ 70 (118)
T 3evi_A 4 ELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAIVNSC------IQHYH------ 70 (118)
T ss_dssp SCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEEGGGT------STTCC------
T ss_pred ceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEEhHHh------HHHCC------
Confidence 46889999999888 4443 89999999999999999999999999985 479999999932 46666
Q ss_pred eeeeeEEEEcCCCCCCCCCcccccCC-------CCHhHHHHHHHHh
Q 006171 214 RRGLPSLVAFPPGCKSSDCMTRFEGE-------LSVDAVTDWFATA 252 (658)
Q Consensus 214 V~~yPTl~~f~~g~~~~~~~~~Y~G~-------rs~~~Lv~fv~k~ 252 (658)
|+++||+++|++|.. ...+.|. .+.++|..++.+.
T Consensus 71 v~~~PT~~~fk~G~~----v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 71 DNCLPTIFVYKNGQI----EAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp GGGCSEEEEEETTEE----EEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred CCCCCEEEEEECCEE----EEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 999999999999864 3455553 3677777777554
No 120
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.43 E-value=3.2e-14 Score=133.66 Aligned_cols=102 Identities=15% Similarity=0.236 Sum_probs=86.1
Q ss_pred eEEEec-CCCCCccccC--CCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccc
Q 006171 137 AFNVVT-SEDFPSIFHD--SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (658)
Q Consensus 137 ~V~~Lt-~~nF~~~v~~--~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~ 213 (658)
.|..++ .++|+..+.+ +++++|.||++||++|+++.|.|+++++.+. .+.++.|||++++ .+|++++
T Consensus 13 ~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~~~~~---~l~~~~~------ 82 (153)
T 2wz9_A 13 AVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP-QVSFVKLEAEGVP---EVSEKYE------ 82 (153)
T ss_dssp CSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSH---HHHHHTT------
T ss_pred CeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC-CeEEEEEECCCCH---HHHHHcC------
Confidence 467787 4889988855 8999999999999999999999999999874 4799999999554 5999999
Q ss_pred eeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHhh
Q 006171 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (658)
Q Consensus 214 V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v 253 (658)
|+++||+++|.+|.. ...+.| .+.+.|.+|+.+.+
T Consensus 83 v~~~Pt~~~~~~G~~----~~~~~G-~~~~~l~~~i~~~l 117 (153)
T 2wz9_A 83 ISSVPTFLFFKNSQK----IDRLDG-AHAPELTKKVQRHA 117 (153)
T ss_dssp CCSSSEEEEEETTEE----EEEEES-SCHHHHHHHHHHHS
T ss_pred CCCCCEEEEEECCEE----EEEEeC-CCHHHHHHHHHHHh
Confidence 889999999997743 345677 47889999998874
No 121
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.42 E-value=3.7e-14 Score=137.15 Aligned_cols=68 Identities=16% Similarity=0.357 Sum_probs=61.2
Q ss_pred CCCCccCccccc------CccC-CCCHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHcCChhhhhccccc
Q 006171 32 PRSFPPSHYDAL------GIKP-YSSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVY 99 (658)
Q Consensus 32 ~~~~~~d~Y~iL------gv~~-~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Aye~L~d~~~R~~YD~~ 99 (658)
......|||+|| |+++ +++.++||+|||+|+++||||+++++.++|.+|++||++|+||.+|+.||..
T Consensus 6 ~~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~a~~~f~~i~~AY~vL~dp~~R~~Yd~~ 80 (181)
T 3uo3_A 6 QRRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRRSQYMLK 80 (181)
T ss_dssp -CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCSCSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCccHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 445578999999 4665 8999999999999999999999987788999999999999999999999983
No 122
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.42 E-value=4.5e-14 Score=135.54 Aligned_cols=63 Identities=11% Similarity=0.255 Sum_probs=57.9
Q ss_pred CcccccCccCCC--CHHHHHHHHHHHHHhcCCCCCCCh--------HHHHHHHHHHHHHcCChhhhhcccccC
Q 006171 38 SHYDALGIKPYS--SVEQVKEAYEKFSSKWNSGEEIPS--------TADFLKIQYAYELLTDPLWKRNYDVYG 100 (658)
Q Consensus 38 d~Y~iLgv~~~a--~~~eIk~ayr~l~~~~HPD~~~~~--------~~~f~~i~~Aye~L~d~~~R~~YD~~g 100 (658)
|||++|||++++ +.++||+|||+|+++||||++++. .+.|..|++||++|+||.+|+.||...
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 799999999999 999999999999999999988642 357999999999999999999999763
No 123
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.41 E-value=5.3e-14 Score=129.30 Aligned_cols=105 Identities=10% Similarity=0.159 Sum_probs=87.5
Q ss_pred EEEec-CCCCCcccc----CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCccc
Q 006171 138 FNVVT-SEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (658)
Q Consensus 138 V~~Lt-~~nF~~~v~----~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f 212 (658)
+..++ .++|++.+. .+++++|.||++||++|+.+.|.|+++++.+. .+.+..|||++++ .+|++++
T Consensus 26 ~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~~~~---~~~~~~~----- 96 (139)
T 3d22_A 26 VHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVDELS---DFSASWE----- 96 (139)
T ss_dssp CEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSH---HHHHHTT-----
T ss_pred EEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCcccH---HHHHHcC-----
Confidence 45564 689998883 58899999999999999999999999999884 4699999999554 5999999
Q ss_pred ceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHhhccCC
Q 006171 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLP 257 (658)
Q Consensus 213 ~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v~~lP 257 (658)
|.++||+++|.+|.. ...+.|. +.+.|.+++.+.+..+|
T Consensus 97 -v~~~Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~~~~~~ 135 (139)
T 3d22_A 97 -IKATPTFFFLRDGQQ----VDKLVGA-NKPELHKKITAILDSLP 135 (139)
T ss_dssp -CCEESEEEEEETTEE----EEEEESC-CHHHHHHHHHHHHHTSC
T ss_pred -CCcccEEEEEcCCeE----EEEEeCC-CHHHHHHHHHHHhccCC
Confidence 889999999987753 4567788 88999999988755444
No 124
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.41 E-value=7.2e-14 Score=137.93 Aligned_cols=63 Identities=13% Similarity=0.150 Sum_probs=56.9
Q ss_pred ccCcccccCccCC--CCHHHHHHHHHHHHHhcCCCCCCC--------hHHHHHHHHHHHHHcCChhhhhcccc
Q 006171 36 PPSHYDALGIKPY--SSVEQVKEAYEKFSSKWNSGEEIP--------STADFLKIQYAYELLTDPLWKRNYDV 98 (658)
Q Consensus 36 ~~d~Y~iLgv~~~--a~~~eIk~ayr~l~~~~HPD~~~~--------~~~~f~~i~~Aye~L~d~~~R~~YD~ 98 (658)
..|||+||||+++ ++.++||+|||+|+++||||+++. +.++|.+|++||++|+||.+|+.||.
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 5699999999986 789999999999999999999863 23569999999999999999999995
No 125
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.40 E-value=4e-14 Score=131.73 Aligned_cols=99 Identities=11% Similarity=0.118 Sum_probs=79.8
Q ss_pred cCCCCCccc-c-CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeeeE
Q 006171 142 TSEDFPSIF-H-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPS 219 (658)
Q Consensus 142 t~~nF~~~v-~-~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPT 219 (658)
+.++|+..+ + ++++++|.|||+||++|+.+.|.++++++++++.+.++.||+++++ .+|++++ |+++||
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~---~~~~~~~------i~~~Pt 80 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVP---DFNKMYE------LYDPCT 80 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCC---TTTTSSC------SCSSCE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCH---HHHHHcC------CCCCCE
Confidence 456787766 4 6899999999999999999999999999999887899999999655 4888888 889999
Q ss_pred EEEcCCCCCCCCCcc--------cccCCCC-HhHHHHHHHHh
Q 006171 220 LVAFPPGCKSSDCMT--------RFEGELS-VDAVTDWFATA 252 (658)
Q Consensus 220 l~~f~~g~~~~~~~~--------~Y~G~rs-~~~Lv~fv~k~ 252 (658)
+++|.+|.. ... ...|..+ .+.|.+++.+.
T Consensus 81 ~~~~~~G~~---v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~ 119 (142)
T 1qgv_A 81 VMFFFRNKH---IMIDLGTGNNNKINWAMEDKQEMVDIIETV 119 (142)
T ss_dssp EEEEETTEE---EEEECC------CCSCCSCHHHHHHHHHHH
T ss_pred EEEEECCcE---EEEecCCCCcceeeeecCcHHHHHHHHHHH
Confidence 999988753 111 2345553 77888887665
No 126
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.40 E-value=9.1e-14 Score=138.30 Aligned_cols=101 Identities=16% Similarity=0.108 Sum_probs=86.2
Q ss_pred EEecCCCCCccccCCCcE-EEEEeccCCCCCCCChHHHHHHHHHhh----cccceeeeecccchhhhHHHhhCCCCcccc
Q 006171 139 NVVTSEDFPSIFHDSKPW-LIQVYSDGSYLCGQFSGAWKTIAALLE----GIANTGMVELGDIRLATHLAERKPIGQIFF 213 (658)
Q Consensus 139 ~~Lt~~nF~~~v~~~~~~-lV~FYapwC~~Ck~l~P~w~~~A~~l~----g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~ 213 (658)
..++.++|+.+...++++ +|.||||||++|+++.|.|+++++.+. +.+.++.|||++++ .+|++++
T Consensus 119 ~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~---~l~~~~~------ 189 (226)
T 1a8l_A 119 TNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYP---EWADQYN------ 189 (226)
T ss_dssp CCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCH---HHHHHTT------
T ss_pred CCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCH---HHHHhCC------
Confidence 457777777766555666 999999999999999999999999997 46799999999554 5999999
Q ss_pred eeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 214 V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|+++||+++|++|.. ...|.|.++.+.|.+|+.+.
T Consensus 190 v~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 190 VMAVPKIVIQVNGED----RVEFEGAYPEKMFLEKLLSA 224 (226)
T ss_dssp CCSSCEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CcccCeEEEEeCCce----eEEEcCCCCHHHHHHHHHHh
Confidence 889999999998854 46789999999999999875
No 127
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.39 E-value=7.9e-14 Score=114.21 Aligned_cols=58 Identities=16% Similarity=0.068 Sum_probs=52.9
Q ss_pred ccCcccccCccC-CCCHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHcCChhhhh
Q 006171 36 PPSHYDALGIKP-YSSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKR 94 (658)
Q Consensus 36 ~~d~Y~iLgv~~-~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Aye~L~d~~~R~ 94 (658)
..++|+||||++ +++.++||+|||+|+++||||++ ++.+.|++|++||++|+++..|+
T Consensus 13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~-g~~~~f~~i~~Aye~L~~~~~rk 71 (71)
T 2guz_A 13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKG-GSPFLATKINEAKDFLEKRGISK 71 (71)
T ss_dssp HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGT-CCHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHHHhhhhhcC
Confidence 358999999999 79999999999999999999996 67789999999999999987663
No 128
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.39 E-value=6.2e-14 Score=126.98 Aligned_cols=101 Identities=12% Similarity=0.142 Sum_probs=85.5
Q ss_pred eEEEe-cCCCCCcccc----CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcc
Q 006171 137 AFNVV-TSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (658)
Q Consensus 137 ~V~~L-t~~nF~~~v~----~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~ 211 (658)
.|..| |.++|+..+. ++++++|.||++||++|+.+.|.|+++++++. .+.+..||+++++ .+|++++
T Consensus 17 ~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~~---~l~~~~~---- 88 (124)
T 1xfl_A 17 QVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDELK---SVASDWA---- 88 (124)
T ss_dssp CCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTSH---HHHHHTT----
T ss_pred cEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECccCH---HHHHHcC----
Confidence 46777 5688998884 58999999999999999999999999999986 4689999999554 5999999
Q ss_pred cceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 212 f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|.++||+++|++|.. ...+.| .+.+.|.+++.+.
T Consensus 89 --v~~~Pt~~~~~~G~~----~~~~~G-~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 89 --IQAMPTFMFLKEGKI----LDKVVG-AKKDELQSTIAKH 122 (124)
T ss_dssp --CCSSSEEEEEETTEE----EEEEES-CCHHHHHHHHHHH
T ss_pred --CCccCEEEEEECCEE----EEEEeC-CCHHHHHHHHHHh
Confidence 889999999987753 356778 5889999998775
No 129
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.38 E-value=9.4e-14 Score=127.86 Aligned_cols=100 Identities=10% Similarity=0.151 Sum_probs=81.7
Q ss_pred ceEEEecCCCCCccccC---CCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCccc
Q 006171 136 HAFNVVTSEDFPSIFHD---SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (658)
Q Consensus 136 ~~V~~Lt~~nF~~~v~~---~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f 212 (658)
..|..||.++|.+.|.. +++++|.|||+||++|+.+.|.|+++|+++. .+.++.||++++. ++++
T Consensus 10 g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd~~~~~------~~~~----- 77 (135)
T 2dbc_A 10 GELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAIVNSCI------EHYH----- 77 (135)
T ss_dssp CSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEECCSSSC------SSCC-----
T ss_pred CceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEEhhcCc------ccCC-----
Confidence 34688899999998832 3699999999999999999999999999874 4689999999442 4555
Q ss_pred ceeeeeEEEEcCCCCCCCCCcccccCCC-------CHhHHHHHHHHh
Q 006171 213 FRRGLPSLVAFPPGCKSSDCMTRFEGEL-------SVDAVTDWFATA 252 (658)
Q Consensus 213 ~V~~yPTl~~f~~g~~~~~~~~~Y~G~r-------s~~~Lv~fv~k~ 252 (658)
|.++||+++|.+|.. ...+.|.. +.+.|..++.+.
T Consensus 78 -i~~~Pt~~~~~~G~~----v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 78 -DNCLPTIFVYKNGQI----EGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp -SSCCSEEEEESSSSC----SEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred -CCCCCEEEEEECCEE----EEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 999999999998854 35566764 788899998876
No 130
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.38 E-value=8.8e-14 Score=122.73 Aligned_cols=55 Identities=9% Similarity=-0.003 Sum_probs=49.8
Q ss_pred ccCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCC--C--------hHHHHHHHHHHHHHcCChh
Q 006171 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--P--------STADFLKIQYAYELLTDPL 91 (658)
Q Consensus 36 ~~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~--~--------~~~~f~~i~~Aye~L~d~~ 91 (658)
..|||+|||++. |+.++||+|||+|+++||||+|+ + +.++|++|++||++|+|+.
T Consensus 40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 579999999996 99999999999999999999875 2 2578999999999999985
No 131
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.37 E-value=1.2e-13 Score=122.57 Aligned_cols=102 Identities=16% Similarity=0.185 Sum_probs=85.6
Q ss_pred eEEEe-cCCCCCcccc----CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcc
Q 006171 137 AFNVV-TSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (658)
Q Consensus 137 ~V~~L-t~~nF~~~v~----~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~ 211 (658)
.|..+ +.++|++.+. .+++++|.||++||++|+.+.|.|+++++.+. .+.+..||+++++ .++++++
T Consensus 7 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~---~~~~~~~---- 78 (118)
T 2vm1_A 7 AVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDELK---DVAEAYN---- 78 (118)
T ss_dssp CEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSH---HHHHHTT----
T ss_pred ceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcccCH---HHHHHcC----
Confidence 45677 4688998884 38999999999999999999999999999886 4689999999544 5899999
Q ss_pred cceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHhh
Q 006171 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (658)
Q Consensus 212 f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v 253 (658)
|+++||+++|++|.. ...+.| .+.+.|.+++.+.+
T Consensus 79 --v~~~Pt~~~~~~g~~----~~~~~g-~~~~~l~~~l~~~~ 113 (118)
T 2vm1_A 79 --VEAMPTFLFIKDGEK----VDSVVG-GRKDDIHTKIVALM 113 (118)
T ss_dssp --CCSBSEEEEEETTEE----EEEEES-CCHHHHHHHHHHHH
T ss_pred --CCcCcEEEEEeCCeE----EEEecC-CCHHHHHHHHHHHh
Confidence 889999999987753 356678 58899999998873
No 132
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.36 E-value=1.4e-13 Score=126.35 Aligned_cols=102 Identities=10% Similarity=0.142 Sum_probs=83.8
Q ss_pred eEEEecC-CCCCcccc--CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccc
Q 006171 137 AFNVVTS-EDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (658)
Q Consensus 137 ~V~~Lt~-~nF~~~v~--~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~ 213 (658)
.|..++. ++|+..+. .+++++|.|||+||++|+.+.|.|+++++.+ .+.+..|||+++. .+|++++
T Consensus 21 ~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~~~---~l~~~~~------ 89 (133)
T 3cxg_A 21 IYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDIHP---KLNDQHN------ 89 (133)
T ss_dssp EEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTTCH---HHHHHTT------
T ss_pred cEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccchH---HHHHhcC------
Confidence 5788886 78888884 3579999999999999999999999998876 3689999999554 5999999
Q ss_pred eeeeeEEEEcC--CCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 214 RRGLPSLVAFP--PGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 214 V~~yPTl~~f~--~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|+++||+++|. +|.. .....+.|. +.+.|.+++.+.
T Consensus 90 v~~~Pt~~~~~~~~g~g--~~~~~~~G~-~~~~l~~~l~~~ 127 (133)
T 3cxg_A 90 IKALPTFEFYFNLNNEW--VLVHTVEGA-NQNDIEKAFQKY 127 (133)
T ss_dssp CCSSSEEEEEEEETTEE--EEEEEEESC-CHHHHHHHHHHH
T ss_pred CCCCCEEEEEEecCCCe--EEEEEEcCC-CHHHHHHHHHHH
Confidence 88999999996 6641 023567787 899999999876
No 133
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.35 E-value=8.8e-14 Score=122.39 Aligned_cols=101 Identities=13% Similarity=0.200 Sum_probs=84.8
Q ss_pred eEEEe-cCCCCCcccc----CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcc
Q 006171 137 AFNVV-TSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (658)
Q Consensus 137 ~V~~L-t~~nF~~~v~----~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~ 211 (658)
.|..+ +.++|++.+. ++++++|.||++||++|+.+.|.++++++.+. .+.+..||+++++ .++++++
T Consensus 5 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~---~~~~~~~---- 76 (113)
T 1ti3_A 5 QVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDELK---AVAEEWN---- 76 (113)
T ss_dssp CEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTCH---HHHHHHH----
T ss_pred ceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEccccH---HHHHhCC----
Confidence 46777 5688998884 48899999999999999999999999999886 4689999999554 5899988
Q ss_pred cceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 212 f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|.++||+++|.+|.. ...+.| .+.+.|.+++.+.
T Consensus 77 --v~~~Pt~~~~~~G~~----~~~~~g-~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 77 --VEAMPTFIFLKDGKL----VDKTVG-ADKDGLPTLVAKH 110 (113)
T ss_dssp --CSSTTEEEEEETTEE----EEEEEC-CCTTHHHHHHHHH
T ss_pred --CCcccEEEEEeCCEE----EEEEec-CCHHHHHHHHHHh
Confidence 889999999987753 345678 6889999998776
No 134
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.35 E-value=2.6e-13 Score=122.87 Aligned_cols=103 Identities=12% Similarity=0.157 Sum_probs=85.9
Q ss_pred EEecCCCCCcccc----CCCcEEEEEeccCCCCCCCChHHH---HHHHHHhhcccceeeeecccchhhhHHHhhCCCCcc
Q 006171 139 NVVTSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (658)
Q Consensus 139 ~~Lt~~nF~~~v~----~~~~~lV~FYapwC~~Ck~l~P~w---~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~ 211 (658)
+.++..+|++.+. .+++++|.||++||++|+.+.|.+ +++++.+++.+.+..|||+.. ....+|++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-~~~~~~~~~~---- 83 (130)
T 2kuc_A 9 IAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKG-EGVELRKKYG---- 83 (130)
T ss_dssp CCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSST-THHHHHHHTT----
T ss_pred CCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCc-chHHHHHHcC----
Confidence 4568889988873 688999999999999999999999 788887777778899999842 1245999999
Q ss_pred cceeeeeEEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 212 FFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 212 f~V~~yPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|.++||+++| ++|.. ...|.|..+.+.|.+|+.+.
T Consensus 84 --v~~~Pt~~~~d~~G~~----~~~~~G~~~~~~l~~~l~~~ 119 (130)
T 2kuc_A 84 --VHAYPTLLFINSSGEV----VYRLVGAEDAPELLKKVKLG 119 (130)
T ss_dssp --CCSSCEEEEECTTSCE----EEEEESCCCHHHHHHHHHHH
T ss_pred --CCCCCEEEEECCCCcE----EEEecCCCCHHHHHHHHHHH
Confidence 8899999999 56643 45688999999999999887
No 135
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.35 E-value=1.1e-13 Score=124.18 Aligned_cols=100 Identities=12% Similarity=0.066 Sum_probs=82.8
Q ss_pred EEEe--cCCCCCccc-cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccce
Q 006171 138 FNVV--TSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (658)
Q Consensus 138 V~~L--t~~nF~~~v-~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V 214 (658)
|..+ +.++|++.+ +++++++|.||++||++|+.+.|.++++++++ +.+.+..|||++++ .+|++++ |
T Consensus 5 v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~~---~~~~~~~------i 74 (118)
T 2f51_A 5 IVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKNG---NAADAYG------V 74 (118)
T ss_dssp SEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTCH---HHHHHTT------C
T ss_pred ceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCCH---HHHHhcC------C
Confidence 4556 567888666 67899999999999999999999999999998 66799999999554 5999999 8
Q ss_pred eeeeEEEEcCC----CCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 215 RGLPSLVAFPP----GCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 215 ~~yPTl~~f~~----g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
+++||+++|.+ |.. ...+.|..+ ++|.+.+.+.
T Consensus 75 ~~~Pt~~~~~~~~~~G~~----~~~~~G~~~-~~l~~~~~~~ 111 (118)
T 2f51_A 75 SSIPALFFVKKEGNEIKT----LDQFVGADV-SRIKADIEKF 111 (118)
T ss_dssp CSSSEEEEEEEETTEEEE----EEEEESCCH-HHHHHHHHHH
T ss_pred CCCCEEEEEeCCCCcceE----EEeecCCCH-HHHHHHHHHh
Confidence 89999999987 542 456788775 5588888776
No 136
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.33 E-value=2.7e-13 Score=122.53 Aligned_cols=101 Identities=13% Similarity=0.209 Sum_probs=84.4
Q ss_pred EEEe-cCCCCCcccc----CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCccc
Q 006171 138 FNVV-TSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (658)
Q Consensus 138 V~~L-t~~nF~~~v~----~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f 212 (658)
+..+ +.++|+..+. ++++++|.||++||++|+++.|.|+++++.+. .+.+..|||++++ .+|++++
T Consensus 16 ~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~---~~~~~~~----- 86 (130)
T 1wmj_A 16 VIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDELK---EVAEKYN----- 86 (130)
T ss_dssp SBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTTSG---GGHHHHT-----
T ss_pred eEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccchH---HHHHHcC-----
Confidence 4556 4578888883 48899999999999999999999999999886 4689999999554 4899998
Q ss_pred ceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHhh
Q 006171 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (658)
Q Consensus 213 ~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v 253 (658)
|.++||+++|++|.. ...+.| .+.+.|.+++.+.+
T Consensus 87 -v~~~Pt~~~~~~g~~----~~~~~g-~~~~~l~~~l~~~~ 121 (130)
T 1wmj_A 87 -VEAMPTFLFIKDGAE----ADKVVG-ARKDDLQNTIVKHV 121 (130)
T ss_dssp -CCSSCCCCBCTTTTC----CBCCCT-TCTTTHHHHHHHHT
T ss_pred -CCccceEEEEeCCeE----EEEEeC-CCHHHHHHHHHHHH
Confidence 889999999988754 356778 57899999998874
No 137
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.32 E-value=1.6e-13 Score=136.98 Aligned_cols=101 Identities=16% Similarity=0.268 Sum_probs=83.8
Q ss_pred eEEEe-cCCCCCcccc-C--CCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCccc
Q 006171 137 AFNVV-TSEDFPSIFH-D--SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (658)
Q Consensus 137 ~V~~L-t~~nF~~~v~-~--~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f 212 (658)
.|..| +.++|...|. + +++++|.||+|||++|+.+.|.|+++|..+. .+.|++|||+ ++ .+|++|+
T Consensus 100 ~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~-~~---~l~~~~~----- 169 (217)
T 2trc_P 100 FVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS-NT---GAGDRFS----- 169 (217)
T ss_dssp SEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH-HH---TCSTTSC-----
T ss_pred eEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC-cH---HHHHHCC-----
Confidence 46788 8899999883 3 3899999999999999999999999999884 5799999998 33 3788888
Q ss_pred ceeeeeEEEEcCCCCCCCCCcccccCCCCH-------hHHHHHHHHh
Q 006171 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSV-------DAVTDWFATA 252 (658)
Q Consensus 213 ~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~-------~~Lv~fv~k~ 252 (658)
|.++||+++|.+|.. ...|.|.++. +.|..|+.+.
T Consensus 170 -i~~~PTl~~~~~G~~----v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 170 -SDVLPTLLVYKGGEL----ISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp -GGGCSEEEEEETTEE----EEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred -CCCCCEEEEEECCEE----EEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 999999999998853 4567776653 8888888765
No 138
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.31 E-value=2.4e-12 Score=107.18 Aligned_cols=82 Identities=13% Similarity=0.101 Sum_probs=71.0
Q ss_pred CcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeeeEEEEcCCCCCCCCCc
Q 006171 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCM 233 (658)
Q Consensus 154 ~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~~~~ 233 (658)
.+.+|.||++||++|+++.|.++++++++.+.+.+..||+++++ .++++++ |+++||+++ +|.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~------v~~~Pt~~~--~G~------ 65 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENP---QKAMEYG------IMAVPTIVI--NGD------ 65 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSC---CTTTSTT------TCCSSEEEE--TTE------
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCH---HHHHHCC------CcccCEEEE--CCE------
Confidence 46799999999999999999999999999877899999999655 3888888 889999998 552
Q ss_pred ccccCCCCHhHHHHHHHHh
Q 006171 234 TRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 234 ~~Y~G~rs~~~Lv~fv~k~ 252 (658)
..+.|..+.+.|.+++.+.
T Consensus 66 ~~~~G~~~~~~l~~~l~~~ 84 (85)
T 1fo5_A 66 VEFIGAPTKEALVEAIKKR 84 (85)
T ss_dssp EECCSSSSSHHHHHHHHHH
T ss_pred EeeecCCCHHHHHHHHHHh
Confidence 2678988999999998765
No 139
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.31 E-value=3.6e-12 Score=106.18 Aligned_cols=81 Identities=12% Similarity=0.066 Sum_probs=70.9
Q ss_pred cEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeeeEEEEcCCCCCCCCCcc
Q 006171 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMT 234 (658)
Q Consensus 155 ~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~~~~~ 234 (658)
+.+|.||++||++|+++.|.++++++++.+.+.+..||+++++ .++++++ |+++||+++ +|. .
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~------v~~~Pt~~~--~G~-----~- 65 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDR---EKAIEYG------LMAVPAIAI--NGV-----V- 65 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCG---GGGGGTC------SSCSSEEEE--TTT-----E-
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCH---HHHHhCC------ceeeCEEEE--CCE-----E-
Confidence 4689999999999999999999999999877899999999654 4889998 889999998 552 2
Q ss_pred cccCCCCHhHHHHHHHHh
Q 006171 235 RFEGELSVDAVTDWFATA 252 (658)
Q Consensus 235 ~Y~G~rs~~~Lv~fv~k~ 252 (658)
.+.|..+.+.|.+++.+.
T Consensus 66 ~~~G~~~~~~l~~~l~~~ 83 (85)
T 1nho_A 66 RFVGAPSREELFEAINDE 83 (85)
T ss_dssp EEECSSCCHHHHHHHHHH
T ss_pred EEccCCCHHHHHHHHHHH
Confidence 678988999999999775
No 140
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.30 E-value=6.6e-10 Score=123.22 Aligned_cols=310 Identities=12% Similarity=0.188 Sum_probs=197.8
Q ss_pred EEEe-cCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceee
Q 006171 138 FNVV-TSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (658)
Q Consensus 138 V~~L-t~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~ 216 (658)
+..+ +.+++++.+..+++++|-||.++|. ...+.|.++|..+.+...++.++.. .++++++ +..
T Consensus 112 ~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~---~~~~~f~~~a~~~~~~~~F~~~~~~------~~~~~~~------v~~ 176 (481)
T 3f8u_A 112 SVPLRTEEEFKKFISDKDASIVGFFDDSFS---EAHSEFLKAASNLRDNYRFAHTNVE------SLVNEYD------DNG 176 (481)
T ss_dssp EEEECSHHHHHHHTTSSSCEEEEEESCTTC---HHHHHHHHHHHHHTTTSCEEEECCH------HHHHHHC------SSS
T ss_pred ceecCCHHHHHHHHhcCCcEEEEEECCCcc---chHHHHHHHHHHhccCceEEEECCH------HHHHHhC------CCC
Confidence 5666 4567888888889999999998865 4478999999999888899887644 3788888 777
Q ss_pred eeEEEEcCCCCC---CCCCccccc-CCCCHhHHHHHHHHhhccCCcceeeccchhhhhhhhhcCCCcEEEEEEeCC-CCC
Q 006171 217 LPSLVAFPPGCK---SSDCMTRFE-GELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKT-GER 291 (658)
Q Consensus 217 yPTl~~f~~g~~---~~~~~~~Y~-G~rs~~~Lv~fv~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~~~-~~~ 291 (658)
.| +++|++... .......|. |..+.++|.+|+... .+|.+..++..+ ...+.. ....++++... .+.
T Consensus 177 ~~-i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~--~~p~v~e~t~~n-~~~~~~----~~~~v~~~~~~~~~~ 248 (481)
T 3f8u_A 177 EG-IILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQEN--IFGICPHMTEDN-KDLIQG----KDLLIAYYDVDYEKN 248 (481)
T ss_dssp EE-EEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHH--TTTTSCEECTTT-HHHHTT----SSEEEEEECCCTTTC
T ss_pred Cc-EEEEecccccCccCCcccccCCCCCCHHHHHHHHHHh--CCCCccccChhH-HHHhcC----CCceEEEEecccccc
Confidence 77 777773210 001347788 889999999999887 467666666655 344432 12333333321 111
Q ss_pred C------cHHHHHHHHhhccC---ceEEEEEecccccHhHHhhcCCC----CCCEEEEEeCCCCCeeeecCCCChH--HH
Q 006171 292 A------SPFVRQISRNYWAY---ASFAFVLWREEESSIWWNTFEVE----SAPAIVFLKDPGVKPVVYYGSFNNS--RL 356 (658)
Q Consensus 292 ~------~~~~~~~A~~~~~~---~~f~~v~~~~~~s~~l~~~f~V~----~~Ptlvlfk~~~~~p~~y~g~~~~~--~L 356 (658)
. ...++.+|..|++. +.|+.+... +.....+.||++ ..|.|+++...+ ....+.+.++.+ .|
T Consensus 249 ~~~~~~~~~~~~~vA~~~~~k~~~i~F~~~D~~--~~~~~l~~~gl~~~~~~~P~~~i~~~~~-~ky~~~~~~t~e~~~l 325 (481)
T 3f8u_A 249 AKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRK--TFSHELSDFGLESTAGEIPVVAIRTAKG-EKFVMQEEFSRDGKAL 325 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETT--TTHHHHGGGTCCCCTTCSCEEEEECSSS-CEEECCSCCCTTSHHH
T ss_pred hhhHHHHHHHHHHHHHHhcCCCceEEEEEEcHH--HHHHHHHHcCCCcccCCCcEEEEEcCCC-cccCCCcccCccHHHH
Confidence 1 12245588889887 888887522 235677899997 589999997433 333456778888 99
Q ss_pred HHHHHhhccCCC---------c--------cccCcchhhhcccccCCcCCCCCCcccEEEEEEcCC-ChhHHHHHHHHHH
Q 006171 357 SEVMEQNKLQEL---------P--------QLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRL-SPELNKMRETIRR 418 (658)
Q Consensus 357 ~~fi~~~~~~~v---------P--------~lts~~~~~~~c~~~~~~~~~k~~~~~lcVi~~~~~-~~~~~~~~~~lr~ 418 (658)
.+|++...-..+ | .++..+..+..-. .+| .++|.+..+ -.....+...+.+
T Consensus 326 ~~f~~~~~~g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~------~~k-----~vlv~f~a~wC~~C~~~~p~~~~ 394 (481)
T 3f8u_A 326 ERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNN------ENK-----DVLIEFYAPWCGHCKNLEPKYKE 394 (481)
T ss_dssp HHHHHHHHHTCCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTC------TTC-----EEEEEEECTTBHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcccccccCCCCCCCCCCeEEecccCHHHHhhc------CCC-----cEEEEEecCcChhHHHhhHHHHH
Confidence 999876432211 1 2222222221111 122 555555443 3455677777777
Q ss_pred HHHhhccccccccccccCCchHHHHhcCC-CcEEEEEEeccchHHHHHHHcccCCcccccCCcCCCCCCCeEEEEEeecC
Q 006171 419 VQETLLSDDESNAADTDQSLAPAAVAFRN-KRLTFAWLDGEAQDRYCSFYLFSETSFETCGARRDMSDVPRLFIVRYKRN 497 (658)
Q Consensus 419 ~a~~~~~~~~~~~~~~~~~~~~~A~~~~~-~~v~F~wvd~~~q~~~~~~f~~~~~~~~~c~~~~~~~~~p~vvI~~~~~n 497 (658)
+++ .+++ ..+.|+.||.+.. +++.. ..+...|.++++ +
T Consensus 395 l~~----------------------~~~~~~~v~~~~id~~~~-~~~~~--------------~~v~~~Pt~~~~----~ 433 (481)
T 3f8u_A 395 LGE----------------------KLSKDPNIVIAKMDATAN-DVPSP--------------YEVRGFPTIYFS----P 433 (481)
T ss_dssp HHH----------------------HTTTCSSEEEEEEETTSS-CCCTT--------------CCCCSSSEEEEE----C
T ss_pred HHH----------------------HhccCCCEEEEEEECCch-hhHhh--------------CCCcccCEEEEE----e
Confidence 777 4433 3699999999654 22221 245567999887 3
Q ss_pred CccccceeccccCcccccccccccCccccchhccCCCCChhHHHHHHHHHhh
Q 006171 498 TTEDEAKIERKPRNIWDAMQEQEVDPASQLVVRYNGSDEIPQIAKWVSEIIQ 549 (658)
Q Consensus 498 ~~~~~~k~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~ 549 (658)
.... .+ ...|.|.++.++|.+||.+.+.
T Consensus 434 ~~~~-~~-----------------------~~~~~G~~~~~~l~~~l~~~~~ 461 (481)
T 3f8u_A 434 ANKK-LN-----------------------PKKYEGGRELSDFISYLQREAT 461 (481)
T ss_dssp TTCT-TS-----------------------CEECCSCCSHHHHHHHHHHHCS
T ss_pred CCCe-Ee-----------------------eeEeCCCCCHHHHHHHHHHhcC
Confidence 3331 00 1235667788999999999987
No 141
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.29 E-value=4.6e-13 Score=135.95 Aligned_cols=101 Identities=16% Similarity=0.259 Sum_probs=82.7
Q ss_pred eEEEe-cCCCCCccc-c--CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCccc
Q 006171 137 AFNVV-TSEDFPSIF-H--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (658)
Q Consensus 137 ~V~~L-t~~nF~~~v-~--~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f 212 (658)
.|..| +.++|...| . .+++++|.||||||++|+.+.|.|+++|..+.+ ++|++|||++ ..+|++|+
T Consensus 113 ~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~-v~f~kVd~d~----~~l~~~~~----- 182 (245)
T 1a0r_P 113 FVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM-VKFCKIKASN----TGAGDRFS----- 182 (245)
T ss_dssp SEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT-SEEEEEEHHH----HCCTTSSC-----
T ss_pred eEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-CEEEEEeCCc----HHHHHHCC-----
Confidence 47888 689999988 3 378999999999999999999999999999865 7999999984 34788888
Q ss_pred ceeeeeEEEEcCCCCCCCCCcccccCC-------CCHhHHHHHHHHh
Q 006171 213 FRRGLPSLVAFPPGCKSSDCMTRFEGE-------LSVDAVTDWFATA 252 (658)
Q Consensus 213 ~V~~yPTl~~f~~g~~~~~~~~~Y~G~-------rs~~~Lv~fv~k~ 252 (658)
|.++||+++|.+|.. ...+.|. ++.+.|..|+.+.
T Consensus 183 -I~~~PTll~~~~G~~----v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 183 -SDVLPTLLVYKGGEL----LSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp -TTTCSEEEEEETTEE----EEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred -CCCCCEEEEEECCEE----EEEEeCCcccccccccHHHHHHHHHHc
Confidence 889999999998853 2233332 5677888888776
No 142
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.29 E-value=7.7e-13 Score=121.19 Aligned_cols=102 Identities=16% Similarity=0.259 Sum_probs=82.5
Q ss_pred cCCCCCcccc--CCCcEEEEEeccCCCCCCCChHHH---HHHHHHhhcccceeeeecccc-hhhhHHHhhCCCCccccee
Q 006171 142 TSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDI-RLATHLAERKPIGQIFFRR 215 (658)
Q Consensus 142 t~~nF~~~v~--~~~~~lV~FYapwC~~Ck~l~P~w---~~~A~~l~g~~~vg~Vdc~e~-~~~~~Lc~k~~i~k~f~V~ 215 (658)
+.++|+..+. .+++++|.|||+||++|+++.|.+ +++++.+++ +.+..|||+++ .....+|++++ |.
T Consensus 18 ~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~-~~~~~vd~~~~~~~~~~l~~~~~------v~ 90 (134)
T 2fwh_A 18 TVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD-TVLLQANVTANDAQDVALLKHLN------VL 90 (134)
T ss_dssp SHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT-SEEEEEECTTCCHHHHHHHHHTT------CC
T ss_pred CHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-cEEEEEeCCCCcchHHHHHHHcC------CC
Confidence 4456666663 488999999999999999999999 999998876 78999999532 24456999999 88
Q ss_pred eeeEEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 216 GLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 216 ~yPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
++||+++| ++|.. .....|.|..+.+.|.+++.+.
T Consensus 91 ~~Pt~~~~d~~G~~--v~~~~~~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 91 GLPTILFFDGQGQE--HPQARVTGFMDAETFSAHLRDR 126 (134)
T ss_dssp SSSEEEEECTTSCB--CGGGCBCSCCCHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCE--eeeeeeeeccCHHHHHHHHHhc
Confidence 99999999 66653 0014689999999999999775
No 143
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.28 E-value=3.9e-13 Score=118.80 Aligned_cols=78 Identities=10% Similarity=-0.006 Sum_probs=62.9
Q ss_pred CCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccc-h--hhhHHHhhCCCCcccceeeeeEEEEcCCCCCC
Q 006171 153 SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI-R--LATHLAERKPIGQIFFRRGLPSLVAFPPGCKS 229 (658)
Q Consensus 153 ~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~-~--~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~ 229 (658)
+++.+|.||||||++|+++.|.|+++++.++ .|||+.+ . ....+|++++ |+++||+++ +|
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~------~v~~~~~~~~~~~~~l~~~~~------V~~~PT~~i--~G--- 74 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAG------ITSYPTWII--NG--- 74 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCTTCTTSCCCHHHHHTT------CCSSSEEEE--TT---
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC------EEEEecccccchhHHHHHHcC------CeEeCEEEE--CC---
Confidence 4567899999999999999999999986653 7777721 1 2345999999 889999887 55
Q ss_pred CCCcccccCCCCHhHHHHHHHH
Q 006171 230 SDCMTRFEGELSVDAVTDWFAT 251 (658)
Q Consensus 230 ~~~~~~Y~G~rs~~~Lv~fv~k 251 (658)
..|.|.++.+.|.+|+.-
T Consensus 75 ----~~~~G~~~~~~l~~~~~~ 92 (106)
T 3kp8_A 75 ----RTYTGVRSLEALAVASGY 92 (106)
T ss_dssp ----EEEESCCCHHHHHHHHTC
T ss_pred ----EEecCCCCHHHHHHHhCC
Confidence 348999999999999743
No 144
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.27 E-value=2.6e-12 Score=116.91 Aligned_cols=92 Identities=18% Similarity=0.294 Sum_probs=75.5
Q ss_pred cCCCcEEEEEeccCCCCCCCChHHHH--HHHHHhhcccceeeeecccchhhhHHHhhCCCCcccce---eeeeEEEEc-C
Q 006171 151 HDSKPWLIQVYSDGSYLCGQFSGAWK--TIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR---RGLPSLVAF-P 224 (658)
Q Consensus 151 ~~~~~~lV~FYapwC~~Ck~l~P~w~--~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V---~~yPTl~~f-~ 224 (658)
.++++++|.||++||++|+.+.|.|+ ++++.+++.+.+..||+++......++++++ | .++||+++| +
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~------v~~~~~~Pt~~~~d~ 100 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYG------DPIQDGIPAVVVVNS 100 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTT------CGGGGCSSEEEEECT
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhC------CccCCccceEEEECC
Confidence 36899999999999999999999999 9999998778999999932113445999999 8 899999999 6
Q ss_pred CCCCCCCCcccccC-------CCCHhHHHHHHHHh
Q 006171 225 PGCKSSDCMTRFEG-------ELSVDAVTDWFATA 252 (658)
Q Consensus 225 ~g~~~~~~~~~Y~G-------~rs~~~Lv~fv~k~ 252 (658)
+|.. ...+.| ..+.+.|.+|+.+.
T Consensus 101 ~G~~----~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 101 DGKV----RYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp TSCE----EEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred CCCE----EEEecCCcccccccCCHHHHHHHHHHh
Confidence 7653 455566 57888999998764
No 145
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.26 E-value=1.9e-12 Score=129.15 Aligned_cols=98 Identities=12% Similarity=0.136 Sum_probs=83.0
Q ss_pred EEEecCCCCCccccCCCcE-EEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceee
Q 006171 138 FNVVTSEDFPSIFHDSKPW-LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (658)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~-lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~ 216 (658)
+..|+.++|+.++..++++ +|.||+|||++|+++.|.|++++..+ +.+.++.|||++++ .+|++++ |++
T Consensus 120 ~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~-~~v~~~~vd~~~~~---~l~~~~~------v~~ 189 (229)
T 2ywm_A 120 KPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAN-DYITSKVIDASENQ---DLAEQFQ------VVG 189 (229)
T ss_dssp CCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHC-TTEEEEEEEGGGCH---HHHHHTT------CCS
T ss_pred ccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHC-CCeEEEEEECCCCH---HHHHHcC------Ccc
Confidence 3567888888877655555 88999999999999999999999998 56799999999554 5999999 889
Q ss_pred eeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
+||+++ +|. ...|.|.++.+.|.+|+.+.
T Consensus 190 ~Pt~~~--~G~-----~~~~~G~~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 190 VPKIVI--NKG-----VAEFVGAQPENAFLGYIMAV 218 (229)
T ss_dssp SSEEEE--GGG-----TEEEESCCCHHHHHHHHHHH
T ss_pred cCEEEE--CCE-----EEEeeCCCCHHHHHHHHHHH
Confidence 999998 553 25689999999999999876
No 146
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.26 E-value=1.6e-12 Score=119.19 Aligned_cols=101 Identities=15% Similarity=0.217 Sum_probs=87.9
Q ss_pred EEEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceee-
Q 006171 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG- 216 (658)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~- 216 (658)
|.++|.+||++.+.+..+++|.|||+ |++|+.++|.++++|++++|.+.|++||.++++ .++++|| |++
T Consensus 8 v~~~t~~~f~~~~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~---~~a~~~g------i~~~ 77 (133)
T 2djk_A 8 IGEIGPETYSDYMSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKAFG---AHAGNLN------LKTD 77 (133)
T ss_dssp SEECCHHHHHHHHHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTG---GGTTTTT------CCSS
T ss_pred eeccChHHHHHHhcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhH---HHHHHcC------CCcc
Confidence 57789999998878888999999999 899999999999999999999999999999665 4889998 888
Q ss_pred -eeEEEEcCC--CCCCCCCccccc--CCCCHhHHHHHHHHhh
Q 006171 217 -LPSLVAFPP--GCKSSDCMTRFE--GELSVDAVTDWFATAI 253 (658)
Q Consensus 217 -yPTl~~f~~--g~~~~~~~~~Y~--G~rs~~~Lv~fv~k~v 253 (658)
.||+++|.. |.. ..+. |..+.+.|.+|+.+.+
T Consensus 78 ~iPtl~i~~~~~g~~-----~~~~~~g~~~~~~l~~fi~~~l 114 (133)
T 2djk_A 78 KFPAFAIQEVAKNQK-----FPFDQEKEITFEAIKAFVDDFV 114 (133)
T ss_dssp SSSEEEEECTTTCCB-----CCCCSSSCCCHHHHHHHHHHHH
T ss_pred cCCEEEEEecCcCcc-----cCCCCccccCHHHHHHHHHHHH
Confidence 999999986 432 2333 9999999999998874
No 147
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.25 E-value=9.7e-13 Score=118.79 Aligned_cols=104 Identities=13% Similarity=0.104 Sum_probs=82.0
Q ss_pred eEEEecCCCCCcccc--CCCcEEEEEecc-------CCCCCCCChHHHHHHHHHhhcccceeeeecccch----hhhHHH
Q 006171 137 AFNVVTSEDFPSIFH--DSKPWLIQVYSD-------GSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR----LATHLA 203 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v~--~~~~~lV~FYap-------wC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~----~~~~Lc 203 (658)
.+...+.++|++.+. ++++++|.|||+ ||++|+.+.|.++++++.+.+.+.+..||+++.. ....++
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~ 85 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFR 85 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHH
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHH
Confidence 456778899999884 489999999999 9999999999999999988777799999993100 233488
Q ss_pred hhCCCCcccceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHH
Q 006171 204 ERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (658)
Q Consensus 204 ~k~~i~k~f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k 251 (658)
++++ |+++||+++|.++.. ...+.| .+.+.|.+|+.+
T Consensus 86 ~~~~------i~~~Pt~~~~~~~~~----~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 86 KNLK------VTAVPTLLKYGTPQK----LVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHHC------CCSSSEEEETTSSCE----EEGGGG-GCHHHHHHHHHC
T ss_pred HHCC------CCeeCEEEEEcCCce----Eecccc-CCHHHHHHHHhc
Confidence 8888 889999999988643 233444 467788888753
No 148
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.21 E-value=1e-10 Score=124.56 Aligned_cols=203 Identities=9% Similarity=0.123 Sum_probs=144.2
Q ss_pred eEEEec-CCCCCcccc-CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccce
Q 006171 137 AFNVVT-SEDFPSIFH-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (658)
Q Consensus 137 ~V~~Lt-~~nF~~~v~-~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V 214 (658)
.+..|+ .++|++.+. ++++++|.||++|| ....+.|.++|..+.+...+|.+++. .+|++++ |
T Consensus 124 ~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~---~~~~~~~~~~A~~~~~~~~f~~~~~~------~~~~~~~------v 188 (350)
T 1sji_A 124 PVEIINSKLEVQAFERIEDQIKLIGFFKSEE---SEYYKAFEEAAEHFQPYIKFFATFDK------GVAKKLS------L 188 (350)
T ss_dssp SEEECCSHHHHHHHHHCCSSCEEEEECSCTT---SHHHHHHHHHHHHTTTTSEEEEECCH------HHHHHHT------C
T ss_pred cceeccchHHHHHHhccCCCcEEEEEECCCC---cHHHHHHHHHHHhhccCcEEEEECCH------HHHHHcC------C
Confidence 356775 467888776 77899999999986 45579999999999888899988654 3889998 8
Q ss_pred eeeeEEEEcCCCCCCCCCcccccCC-CCHhHHHHHHHHhhccCCcceeeccchhhhhhhhhcCCCcEEEEEEeCCCC---
Q 006171 215 RGLPSLVAFPPGCKSSDCMTRFEGE-LSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGE--- 290 (658)
Q Consensus 215 ~~yPTl~~f~~g~~~~~~~~~Y~G~-rs~~~Lv~fv~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~~~~~--- 290 (658)
+ +|+|++|+++.. .+..|.|. ++.++|.+|+... ..|.+..++.++ ...+... +..+..+++|.....
T Consensus 189 ~-~p~i~~~~~~~~---~~~~y~g~~~~~~~l~~fi~~~--~~p~v~elt~~~-~~~~~~~-~~~~~~~l~f~~~~~~~~ 260 (350)
T 1sji_A 189 K-MNEVDFYEPFMD---EPIAIPDKPYTEEELVEFVKEH--QRPTLRRLRPED-MFETWED-DLNGIHIVAFAERSDPDG 260 (350)
T ss_dssp C-TTCEEEECTTCS---SCEECSSSSCCHHHHHHHHHHH--CCCSEEECCTTT-HHHHHHS-CSSSEEEEEECCTTSHHH
T ss_pred C-CCcEEEEeCCCC---CceecCCCCCCHHHHHHHHHHc--CccchhhcChhh-HHHHhcC-CCCCcEEEEEEcCCCccH
Confidence 8 999999997543 24789997 9999999999887 467666677666 3444432 111334555654221
Q ss_pred -CCcHHHHHHHHhhcc--CceEEEEEecccccHhHH----hhcCCC-CCCEEEEEeCCCCCeee--e---cCCCChHHHH
Q 006171 291 -RASPFVRQISRNYWA--YASFAFVLWREEESSIWW----NTFEVE-SAPAIVFLKDPGVKPVV--Y---YGSFNNSRLS 357 (658)
Q Consensus 291 -~~~~~~~~~A~~~~~--~~~f~~v~~~~~~s~~l~----~~f~V~-~~Ptlvlfk~~~~~p~~--y---~g~~~~~~L~ 357 (658)
.....++.+|..|++ .+.|+.+.... ...++ +.||+. .+|+|++++........ + .+.++.+.|.
T Consensus 261 ~~~~~~~~~vA~~~~~~~~~~f~~id~~~--~~~~~~~~~~~~gi~~~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~ 338 (350)
T 1sji_A 261 YEFLEILKQVARDNTDNPDLSIVWIDPDD--FPLLVAYWEKTFKIDLFKPQIGVVNVTDADSVWMEIPDDDDLPTAEELE 338 (350)
T ss_dssp HHHHHHHHHHHHHGGGCSSCCEEEECGGG--CHHHHHHHHHHCCSCTTSCEEEEEESSSSCEEESCSSCCSCCCCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCceEEEEECchh--hHHHHHHHHhhcCCCccCCcEEEEecccccccccCCCcccccCCHHHHH
Confidence 123445668888976 77888875332 24455 789998 48999999763332222 2 2478899999
Q ss_pred HHHHhhc
Q 006171 358 EVMEQNK 364 (658)
Q Consensus 358 ~fi~~~~ 364 (658)
+|++...
T Consensus 339 ~F~~d~~ 345 (350)
T 1sji_A 339 DWIEDVL 345 (350)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998743
No 149
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.21 E-value=1.2e-11 Score=125.48 Aligned_cols=84 Identities=14% Similarity=0.104 Sum_probs=73.0
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhh----cccceeeeecccchhhhHHHhhCCCCcccceeeeeEEEEcCCCC
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE----GIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGC 227 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~----g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~ 227 (658)
.++++++.||||||+||+++.|.|+++|..+. +.+.++.|||++++ .+|++++ |+++||+++ +|.
T Consensus 137 ~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~---~~~~~~~------V~~vPt~~i--~G~ 205 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENP---DIADKYG------VMSVPSIAI--NGY 205 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCH---HHHHHTT------CCSSSEEEE--TTE
T ss_pred CCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCH---HHHHHcC------CeeeCeEEE--CCE
Confidence 46688999999999999999999999999984 45689999999654 4899998 889999988 553
Q ss_pred CCCCCcccccCCCCHhHHHHHHHHh
Q 006171 228 KSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 228 ~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
..|.|.++.++|++|+.+.
T Consensus 206 ------~~~~G~~~~~~l~~~l~~~ 224 (243)
T 2hls_A 206 ------LVFVGVPYEEDFLDYVKSA 224 (243)
T ss_dssp ------EEEESCCCHHHHHHHHHHH
T ss_pred ------EEEeCCCCHHHHHHHHHHH
Confidence 3489999999999999887
No 150
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.84 E-value=1.3e-12 Score=118.42 Aligned_cols=99 Identities=16% Similarity=0.151 Sum_probs=78.4
Q ss_pred CCCccccCCCcEEEEEeccCCCCCCCChHHH---HHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeeeEEE
Q 006171 145 DFPSIFHDSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLV 221 (658)
Q Consensus 145 nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w---~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl~ 221 (658)
.+......++++||.|||+||++|+.+.|.+ +++++.+++.+.+..|||+.+ ....+|++++ |.++||++
T Consensus 11 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-~~~~~~~~~~------v~~~Pt~~ 83 (130)
T 2lst_A 11 ALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTP-EGQELARRYR------VPGTPTFV 83 (130)
Confidence 3444445788999999999999999999999 999998887778999999632 2245888888 88999999
Q ss_pred Ec--CCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 222 AF--PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 222 ~f--~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
+| .+|.. .....+.|.++.+.|.+++.+.
T Consensus 84 ~~d~~~G~~--~~~~~~~G~~~~~~l~~~l~~~ 114 (130)
T 2lst_A 84 FLVPKAGAW--EEVGRLFGSRPRAEFLKELRQV 114 (130)
Confidence 99 44531 0035688999999999998776
No 151
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.20 E-value=1.2e-10 Score=125.29 Aligned_cols=208 Identities=11% Similarity=0.123 Sum_probs=146.3
Q ss_pred eEEEecC-CCCCcccc-CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccce
Q 006171 137 AFNVVTS-EDFPSIFH-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (658)
Q Consensus 137 ~V~~Lt~-~nF~~~v~-~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V 214 (658)
.|..++. +++++.+. ++++++|-||++||+ ...+.|.++|..+.+...||.+++. . +|++++ |
T Consensus 126 ~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~f~~~A~~~~~~~~F~~~~~~---~---~~~~~~------v 190 (367)
T 3us3_A 126 PVELIEGERELQAFENIEDEIKLIGYFKNKDS---EHYKAFKEAAEEFHPYIPFFATFDS---K---VAKKLT------L 190 (367)
T ss_dssp SEEECCSHHHHHHHHHCCSSCEEEEECSCTTC---HHHHHHHHHHHHHTTTSCEEEECCH---H---HHHHHT------C
T ss_pred CcEEcCCHHHHHHHhccCCCcEEEEEECCCCc---hHHHHHHHHHHhhcCCcEEEEECCH---H---HHHHcC------C
Confidence 3667754 77888886 789999999999865 6678999999999988899998765 3 888988 7
Q ss_pred eeeeEEEEcCCCCCCCCCcccccCC-CCHhHHHHHHHHhhccCCcceeeccchhhhhhhhhcCCCcEEEEEEeCCCC---
Q 006171 215 RGLPSLVAFPPGCKSSDCMTRFEGE-LSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGE--- 290 (658)
Q Consensus 215 ~~yPTl~~f~~g~~~~~~~~~Y~G~-rs~~~Lv~fv~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~~~~~--- 290 (658)
++ |+|++|+++.. ....|.|. ++.++|.+|+... .+|.+..++.++....| ... ...+.+++|.+...
T Consensus 191 ~~-p~i~lf~~~~~---~~~~y~g~~~~~~~l~~fi~~~--~~p~v~elt~~~~~~~~-~~~-~~~~~~~~f~~~~~~~~ 262 (367)
T 3us3_A 191 KL-NEIDFYEAFME---EPVTIPDKPNSEEEIVNFVEEH--RRSTLRKLKPESMYETW-EDD-MDGIHIVAFAEEADPDG 262 (367)
T ss_dssp CT-TCEEEECTTCS---SCEECSSSSCCHHHHHHHHHHT--CSCSEEECCGGGHHHHH-HSC-BTTEEEEEECCTTSHHH
T ss_pred CC-CeEEEEcCCCC---CCeecCCCCCCHHHHHHHHHHc--CccceeecChhhHHHHH-hhc-cCCcEEEEEEcCCChhH
Confidence 65 99999998543 35789995 9999999999987 46766667766633333 221 12344555654221
Q ss_pred -CCcHHHHHHHHhhcc--CceEEEEEeccccc--HhHHhhcCCC-CCCEEEEEeCCCCCeee--ec---CCCChHHHHHH
Q 006171 291 -RASPFVRQISRNYWA--YASFAFVLWREEES--SIWWNTFEVE-SAPAIVFLKDPGVKPVV--YY---GSFNNSRLSEV 359 (658)
Q Consensus 291 -~~~~~~~~~A~~~~~--~~~f~~v~~~~~~s--~~l~~~f~V~-~~Ptlvlfk~~~~~p~~--y~---g~~~~~~L~~f 359 (658)
.....++.+|..|++ .+.|+++....... +.+.+.||+. .+|+++++...+..... +. +.++.+.|.+|
T Consensus 263 ~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~~~~~fgl~~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F 342 (367)
T 3us3_A 263 YEFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEKTFDIDLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDW 342 (367)
T ss_dssp HHHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHHHHHHHTCCTTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCceEEEEECCccchhHHHHHHHhcCCCCCCCeEEEEecccccceeecCCcccccCCHHHHHHH
Confidence 112345668999987 68888886443211 1124569998 79999999865432222 33 36899999999
Q ss_pred HHhhccCC
Q 006171 360 MEQNKLQE 367 (658)
Q Consensus 360 i~~~~~~~ 367 (658)
++...-..
T Consensus 343 ~~~~~~Gk 350 (367)
T 3us3_A 343 LEDVLEGE 350 (367)
T ss_dssp HHHHHHTS
T ss_pred HHHHHcCC
Confidence 98754443
No 152
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.11 E-value=2.1e-11 Score=116.10 Aligned_cols=104 Identities=12% Similarity=0.114 Sum_probs=79.6
Q ss_pred EEecCCCCCccc----cCCCcEEEEEeccCCCCCCCChHHH---HHHHHHhhcccceeeeecccchhhh-----------
Q 006171 139 NVVTSEDFPSIF----HDSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIRLAT----------- 200 (658)
Q Consensus 139 ~~Lt~~nF~~~v----~~~~~~lV~FYapwC~~Ck~l~P~w---~~~A~~l~g~~~vg~Vdc~e~~~~~----------- 200 (658)
..++..+|++.+ ..+++++|.|||+||++|+.+.+.. .++.+.++..+.+..||++++....
T Consensus 29 ~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~ 108 (172)
T 3f9u_A 29 VHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTE 108 (172)
T ss_dssp CCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEE
T ss_pred cccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchh
Confidence 446677887777 3689999999999999999986655 6777777666789999998543210
Q ss_pred -----------HH-HhhCCCCcccceeeeeEEEEc-CCCCCCCCCcccccCCCC-HhHHHHHHHHh
Q 006171 201 -----------HL-AERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELS-VDAVTDWFATA 252 (658)
Q Consensus 201 -----------~L-c~k~~i~k~f~V~~yPTl~~f-~~g~~~~~~~~~Y~G~rs-~~~Lv~fv~k~ 252 (658)
.+ +++++ |.++||+++| ++|.. ...+.|.++ .+.+.+++.+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~------v~~~Pt~~lid~~G~~----~~~~~G~~~~~~~l~~~l~~~ 164 (172)
T 3f9u_A 109 RTLRTVGDKWSYLQRVKFG------ANAQPFYVLIDNEGNP----LNKSYAYDEDISKYINFLQTG 164 (172)
T ss_dssp EEEEEHHHHHHHHHHHHHS------CCCSSEEEEECTTSCB----SSCCBCSCCCHHHHHHHHHHH
T ss_pred hhhhhhhhhhhHHHHHHcC------CCCcceEEEECCCCCE----EeeccCCCCCHHHHHHHHHHH
Confidence 01 56666 8899999999 66643 456679998 99999999876
No 153
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.11 E-value=1.1e-09 Score=111.42 Aligned_cols=212 Identities=14% Similarity=0.208 Sum_probs=144.9
Q ss_pred eEEEecC-CCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCccccee
Q 006171 137 AFNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (658)
Q Consensus 137 ~V~~Lt~-~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~ 215 (658)
.|..|++ ++++.++.++++++|-|+++| |....+.|.++|..+.+...+|.+.-. .++++++ ++
T Consensus 7 ~v~~l~s~~~~~~~l~~~~v~vvgff~~~---~~~~~~~f~~~A~~lr~~~~F~~~~~~------~v~~~~~------~~ 71 (252)
T 2h8l_A 7 ASVPLRTEEEFKKFISDKDASIVGFFDDS---FSEAHSEFLKAASNLRDNYRFAHTNVE------SLVNEYD------DN 71 (252)
T ss_dssp CEEECCSHHHHHHHHTSSSCEEEEEESCT---TSHHHHHHHHHHHHTTTTSCEEEECCH------HHHHHHC------SS
T ss_pred CceeecCHHHHHHHhhcCCeEEEEEECCC---CChHHHHHHHHHHhcccCcEEEEEChH------HHHHHhC------CC
Confidence 3677854 556666788889999999998 456788999999999888899888533 3888888 77
Q ss_pred eeeEEEEcCCCCCC---CCCcccc-cCCCCHhHHHHHHHHhhccCCcceeeccchhhhhhhhhcCCCcEEEEEEeCCCCC
Q 006171 216 GLPSLVAFPPGCKS---SDCMTRF-EGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGER 291 (658)
Q Consensus 216 ~yPTl~~f~~g~~~---~~~~~~Y-~G~rs~~~Lv~fv~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~~~~~~ 291 (658)
+ |+|++|+++... ......| .|.++.++|.+|+... .+|.+..++.++ ...+. + ....++++....+.
T Consensus 72 ~-p~i~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~--~~Plv~e~t~~n-~~~~~-~---~~~~v~~~~~~~~~ 143 (252)
T 2h8l_A 72 G-EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQEN--IFGICPHMTEDN-KDLIQ-G---KDLLIAYYDVDYEK 143 (252)
T ss_dssp S-EEEEEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHH--SSCSSCEECTTT-HHHHS-S---SSEEEEEECCBTTT
T ss_pred C-CcEEEEcchhhcccccccccccCCCCcCHHHHHHHHHhc--ccCCeeeccccc-Hhhhc-C---CCeEEEEeecchhh
Confidence 7 999999864100 0134689 9999999999999987 478777777766 34442 1 22444444321111
Q ss_pred C-------cHHHHHHHHhhccC---ceEEEEEecccccHhHHhhcCC--C--CCCEEEEEeCCCCCeeeecCCCChHH--
Q 006171 292 A-------SPFVRQISRNYWAY---ASFAFVLWREEESSIWWNTFEV--E--SAPAIVFLKDPGVKPVVYYGSFNNSR-- 355 (658)
Q Consensus 292 ~-------~~~~~~~A~~~~~~---~~f~~v~~~~~~s~~l~~~f~V--~--~~Ptlvlfk~~~~~p~~y~g~~~~~~-- 355 (658)
. ...++.+|..|++. +.|+++... +...+.+.||+ . ..|+|+++...+.+ ..+.+.++.+.
T Consensus 144 ~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~--~~~~~~~~fgl~~~~~~~P~v~i~~~~~~k-y~~~~~~t~~~~~ 220 (252)
T 2h8l_A 144 NAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRK--TFSHELSDFGLESTAGEIPVVAIRTAKGEK-FVMQEEFSRDGKA 220 (252)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETT--TTHHHHGGGTCCCCSCSSCEEEEECTTSCE-EECCSCCCTTSHH
T ss_pred cchhHHHHHHHHHHHHHHccccCceEEEEEEchH--HHHHHHHHcCCCCccCCCCEEEEEeCcCcE-ecCCcccCcchHH
Confidence 1 12334488899877 888888643 23558899999 3 48999999653332 23567788788
Q ss_pred HHHHHHhhccCCC-ccccCc
Q 006171 356 LSEVMEQNKLQEL-PQLRSV 374 (658)
Q Consensus 356 L~~fi~~~~~~~v-P~lts~ 374 (658)
|.+|++...-..+ |.+-|+
T Consensus 221 i~~F~~~~~~Gkl~~~~kSe 240 (252)
T 2h8l_A 221 LERFLQDYFDGNLKRYLKSE 240 (252)
T ss_dssp HHHHHHHHHHTCSCCCC---
T ss_pred HHHHHHHHHCCCccccccCC
Confidence 9999988654433 333343
No 154
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.09 E-value=5.6e-11 Score=97.22 Aligned_cols=73 Identities=18% Similarity=0.190 Sum_probs=60.5
Q ss_pred EEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeeeEEEEcCCCCCCCCCcccc
Q 006171 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRF 236 (658)
Q Consensus 157 lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~~~~~~Y 236 (658)
.|.||++||++|+.+.|.++++++++.+...+..|| + ..++++++ |+++||+++ +|.. . +
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~---~~~~~~~~------v~~~Pt~~~--~G~~-----~-~ 62 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK---E---MDQILEAG------LTALPGLAV--DGEL-----K-I 62 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC---S---HHHHHHHT------CSSSSCEEE--TTEE-----E-E
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec---C---HHHHHHCC------CCcCCEEEE--CCEE-----E-E
Confidence 589999999999999999999999998767888888 2 24889998 889999998 5532 2 2
Q ss_pred cCCC-CHhHHHHHH
Q 006171 237 EGEL-SVDAVTDWF 249 (658)
Q Consensus 237 ~G~r-s~~~Lv~fv 249 (658)
.|.. +.+.|.+|+
T Consensus 63 ~G~~~~~~~l~~~l 76 (77)
T 1ilo_A 63 MGRVASKEEIKKIL 76 (77)
T ss_dssp CSSCCCHHHHHHHC
T ss_pred cCCCCCHHHHHHHh
Confidence 3887 899988874
No 155
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.08 E-value=1.5e-11 Score=117.02 Aligned_cols=98 Identities=16% Similarity=0.127 Sum_probs=74.8
Q ss_pred CCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeeeEEEEc-C
Q 006171 146 FPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAF-P 224 (658)
Q Consensus 146 F~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl~~f-~ 224 (658)
|+.....+++++|.|||+||++|+.+.|.|+++++..+..+.|..|||+++.. .++.++++. +.++||+++| +
T Consensus 39 ~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~--~~~~~~~~~----~~~~Pt~~~~d~ 112 (164)
T 1sen_A 39 KKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEE--PKDEDFSPD----GGYIPRILFLDP 112 (164)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGS--CSCGGGCTT----CSCSSEEEEECT
T ss_pred HHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCch--HHHHHhccc----CCcCCeEEEECC
Confidence 33333578999999999999999999999999887766557899999995432 156677633 4679999999 6
Q ss_pred CCCCCCCCcccccCC----------CCHhHHHHHHHHhh
Q 006171 225 PGCKSSDCMTRFEGE----------LSVDAVTDWFATAI 253 (658)
Q Consensus 225 ~g~~~~~~~~~Y~G~----------rs~~~Lv~fv~k~v 253 (658)
+|.. ...+.|. .+.+.|++++.+.+
T Consensus 113 ~G~~----~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l 147 (164)
T 1sen_A 113 SGKV----HPEIINENGNPSYKYFYVSAEQVVQGMKEAQ 147 (164)
T ss_dssp TSCB----CTTCCCTTSCTTSTTCCCSHHHHHHHHHHHH
T ss_pred CCCE----EEEEeCCCCccchhcccCCHHHHHHHHHHHH
Confidence 7754 3445663 78899999998763
No 156
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.06 E-value=2.1e-11 Score=109.21 Aligned_cols=89 Identities=19% Similarity=0.204 Sum_probs=67.2
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-----cceeeeecccchhhhHHHhhCCCCcccceeeeeEEEEcCCC
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-----ANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPG 226 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-----~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g 226 (658)
+....||+|||+||++|+.+.|. ++..++.. ..+.+||.+++. ...++.+++ |.+.|||++|.+|
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~---i~~~~~~~a~~~~~~l~~vdv~~~~-~~~la~~~~------V~g~PT~i~f~~G 86 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAE---IAPQYPLTDEGRAAPVQRLQMRDPL-PPGLELARP------VTFTPTFVLMAGD 86 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHH---TTTTGGGSHHHHHSCEEEEETTSCC-CTTCBCSSC------CCSSSEEEEEETT
T ss_pred cCCCEEEEEECCCCHHHHHHHHH---HHhhHHHhhhcccceEEEEECCCCC-chhHHHHCC------CCCCCEEEEEECC
Confidence 45789999999999999998753 33333322 578899988652 134777777 8899999999988
Q ss_pred CCCCCCcccccCCCCHhHHHHHHHHhhc
Q 006171 227 CKSSDCMTRFEGELSVDAVTDWFATAIL 254 (658)
Q Consensus 227 ~~~~~~~~~Y~G~rs~~~Lv~fv~k~v~ 254 (658)
.. ..+..|....+.+..|+.+.+.
T Consensus 87 ~e----v~Ri~G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 87 VE----SGRLEGYPGEDFFWPMLARLIG 110 (116)
T ss_dssp EE----EEEEECCCCHHHHHHHHHHHHH
T ss_pred EE----EeeecCCCCHHHHHHHHHHHHh
Confidence 54 4678999999999999987643
No 157
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.05 E-value=2.3e-11 Score=107.82 Aligned_cols=100 Identities=11% Similarity=0.106 Sum_probs=79.8
Q ss_pred EEEec-CCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhh-hHHHhhCCCCccccee
Q 006171 138 FNVVT-SEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRR 215 (658)
Q Consensus 138 V~~Lt-~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~-~~Lc~k~~i~k~f~V~ 215 (658)
...|+ .++|++++.++++++|.|+|.|||.|+.+.|.++++++. +.+.+..||.++++.. ..+|++++ |+
T Consensus 8 ~~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn~IA~~~~------V~ 79 (112)
T 3iv4_A 8 AIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSDYIAKKTN------VK 79 (112)
T ss_dssp EEECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHHHHHHHHT------CC
T ss_pred eeecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhHHHHHHhC------Cc
Confidence 45664 467988887799999999999999999999999999984 5679999999976543 34899999 99
Q ss_pred e-eeEEEEcCCCCCCCCCcccccCCCCHhHHHHH
Q 006171 216 G-LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDW 248 (658)
Q Consensus 216 ~-yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~f 248 (658)
+ .||+++|++|.. ....-.|..+.++|.+.
T Consensus 80 h~sPq~il~k~G~~---v~~~SH~~I~~~~l~~~ 110 (112)
T 3iv4_A 80 HESPQAFYFVNGEM---VWNRDHGDINVSSLAQA 110 (112)
T ss_dssp CCSSEEEEEETTEE---EEEEEGGGCSHHHHHHH
T ss_pred cCCCeEEEEECCEE---EEEeeccccCHHHHHHh
Confidence 5 999999999964 22223467777777654
No 158
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.03 E-value=2e-10 Score=107.80 Aligned_cols=98 Identities=18% Similarity=0.200 Sum_probs=77.6
Q ss_pred CCCCccc----cCCCcEEEEEe-ccCCCCCCCChHHH---HHHHHHhhcccceeeeecccch--------hhhHHHhhCC
Q 006171 144 EDFPSIF----HDSKPWLIQVY-SDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIR--------LATHLAERKP 207 (658)
Q Consensus 144 ~nF~~~v----~~~~~~lV~FY-apwC~~Ck~l~P~w---~~~A~~l~g~~~vg~Vdc~e~~--------~~~~Lc~k~~ 207 (658)
.+|++.+ ..+++++|.|| |+||++|+++.|.+ .++++.+...+.+..||+++.. ....++++|+
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~ 113 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYK 113 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcC
Confidence 4455555 25789999999 99999999999999 7887766556788999998542 2346899998
Q ss_pred CCcccceeeeeEEEEc-CCCCCCCCCcccccCCC--CHhHHHHHHHHh
Q 006171 208 IGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (658)
Q Consensus 208 i~k~f~V~~yPTl~~f-~~g~~~~~~~~~Y~G~r--s~~~Lv~fv~k~ 252 (658)
|.++||+++| ++|.. ...+ |.. +.+.+.+++.+.
T Consensus 114 ------v~~~Pt~~~~d~~G~~----~~~~-G~~~~~~~~l~~~l~~~ 150 (154)
T 2ju5_A 114 ------VTGFPELVFIDAEGKQ----LARM-GFEPGGGAAYVSKVKSA 150 (154)
T ss_dssp ------CCSSSEEEEECTTCCE----EEEE-CCCTTCHHHHHHHHHHH
T ss_pred ------CCCCCEEEEEcCCCCE----EEEe-cCCCCCHHHHHHHHHHH
Confidence 8899999999 56643 4556 887 899999998776
No 159
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=98.99 E-value=4.3e-10 Score=102.91 Aligned_cols=103 Identities=15% Similarity=0.111 Sum_probs=80.2
Q ss_pred EecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccc-----------------------
Q 006171 140 VVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI----------------------- 196 (658)
Q Consensus 140 ~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~----------------------- 196 (658)
.++.+.+....-.+++++|.||++||++|+.+.|.++++++++.+.+.+..|+++..
T Consensus 16 ~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (148)
T 2b5x_A 16 WLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIF 95 (148)
T ss_dssp EESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEE
T ss_pred cccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceE
Confidence 355555543334678999999999999999999999999999987688999997531
Q ss_pred -hhhhHHHhhCCCCcccceeeeeEEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 197 -RLATHLAERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 197 -~~~~~Lc~k~~i~k~f~V~~yPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
.....+++.++ |.++||++++ ++|.. ...+.|..+.+.|.+++.+.
T Consensus 96 ~d~~~~~~~~~~------v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~ 143 (148)
T 2b5x_A 96 VDSDHALTDAFE------NEYVPAYYVFDKTGQL----RHFQAGGSGMKMLEKRVNRV 143 (148)
T ss_dssp ECSSCHHHHHTC------CCCSSEEEEECTTCBE----EEEEESCSTTHHHHHHHHHH
T ss_pred ECCchhHHHHhC------CCCCCEEEEECCCCcE----EEEecCCCCHHHHHHHHHHH
Confidence 11235788888 8899999999 55542 45678989999999998876
No 160
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.97 E-value=4.5e-10 Score=101.34 Aligned_cols=89 Identities=13% Similarity=0.099 Sum_probs=73.4
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccch-------------------hhhHHHhhCCCCccc
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR-------------------LATHLAERKPIGQIF 212 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~-------------------~~~~Lc~k~~i~k~f 212 (658)
.+++++|.||++||++|+...|.++++++++. .+.+..|+++++. ....++++++
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~----- 96 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYN----- 96 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTT-----
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcC-----
Confidence 57899999999999999999999999999997 5689999997521 0245778887
Q ss_pred ceeeeeEEEEcC-CCCCCCCCccccc---CCCCHhHHHHHHHHh
Q 006171 213 FRRGLPSLVAFP-PGCKSSDCMTRFE---GELSVDAVTDWFATA 252 (658)
Q Consensus 213 ~V~~yPTl~~f~-~g~~~~~~~~~Y~---G~rs~~~Lv~fv~k~ 252 (658)
|.++||++++. +|.. . .|. |..+.+.|.+++.+.
T Consensus 97 -i~~~P~~~lid~~G~i----~-~~~~~~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 97 -VPWQPAFVFYRADGTS----T-FVNNPTAAMSQDELSGRVAAL 134 (136)
T ss_dssp -CCSSSEEEEECTTSCE----E-EECCSSSCCCHHHHHHHHHHC
T ss_pred -CCCCCEEEEECCCCcE----E-EEEcCCCccCHHHHHHHHHHH
Confidence 88999999994 5532 3 678 999999999998765
No 161
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=98.95 E-value=5.9e-10 Score=100.29 Aligned_cols=90 Identities=14% Similarity=0.006 Sum_probs=73.2
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccch--------------------hhhHHHhhCCCCcc
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR--------------------LATHLAERKPIGQI 211 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~--------------------~~~~Lc~k~~i~k~ 211 (658)
.+++++|.||++||++|+.+.|.++++++++. .+.+..|++++.. ....++++++
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 98 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFG---- 98 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTT----
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcC----
Confidence 57899999999999999999999999999987 5689999986421 1234777777
Q ss_pred cceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 212 f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|.++||++++.+++. .. .|.|..+.+.|.+++.+.
T Consensus 99 --i~~~P~~~~id~~g~---i~-~~~g~~~~~~l~~~l~~~ 133 (136)
T 1zzo_A 99 --VTQQPAYAFVDPHGN---VD-VVRGRMSQDELTRRVTAL 133 (136)
T ss_dssp --CCSSSEEEEECTTCC---EE-EEESCCCHHHHHHHHHHH
T ss_pred --CCCCceEEEECCCCC---EE-EEecCCCHHHHHHHHHHH
Confidence 889999999954333 23 789999999999998876
No 162
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=98.95 E-value=8.2e-09 Score=104.77 Aligned_cols=203 Identities=12% Similarity=0.090 Sum_probs=138.4
Q ss_pred EEEecC-CCCCccccC-CCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCccccee
Q 006171 138 FNVVTS-EDFPSIFHD-SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (658)
Q Consensus 138 V~~Lt~-~nF~~~v~~-~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~ 215 (658)
|..|++ +++++++.+ +++++|-|++++| ....+.|.++|+.|.+...+|.+.-. .++++++ ++
T Consensus 8 v~~l~s~~~~~~~~~~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~~~F~~t~~~------~v~~~~~------v~ 72 (250)
T 3ec3_A 8 SKEILTLKQVQEFLKDGDDVVILGVFQGVG---DPGYLQYQDAANTLREDYKFHHTFST------EIAKFLK------VS 72 (250)
T ss_dssp SEECCCHHHHHHHHHHCSSCEEEEECSCTT---CHHHHHHHHHHHHHTTTCCEEEECCH------HHHHHHT------CC
T ss_pred ceecCCHHHHHHHHhcCCCeEEEEEEcCCC---chHHHHHHHHHHhhhcCcEEEEECcH------HHHHHcC------CC
Confidence 466754 677777777 8999999999974 57889999999999888899987533 3777887 77
Q ss_pred eeeEEEEcCCCCCC---CCCccccc--CCCCHhHHHHHHHHhhccCCcceeeccchhhhhhhhhcCCCcEEEEEEe--CC
Q 006171 216 GLPSLVAFPPGCKS---SDCMTRFE--GELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFS--KT 288 (658)
Q Consensus 216 ~yPTl~~f~~g~~~---~~~~~~Y~--G~rs~~~Lv~fv~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~--~~ 288 (658)
+ |+|++|+++... ......|. |.++.++|.+|+... .+|.+..++.++. ..... .++.+++|. +.
T Consensus 73 ~-p~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~--~~Plv~e~t~~n~-~~~~~----~~~l~~~~~~~d~ 144 (250)
T 3ec3_A 73 L-GKLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKH--ALPLVGHRKTSND-AKRYS----KRPLVVVYYSVDF 144 (250)
T ss_dssp S-SEEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHH--SSCTEEEECTTTH-HHHSC----SSSEEEEEECCCC
T ss_pred C-CeEEEEecchhhccccccceeccCCCCCCHHHHHHHHHHc--CCCceeecCccch-hhhhc----cCccEEEEEeccc
Confidence 7 999999863100 01246788 589999999999987 4787777777663 33222 234444433 21
Q ss_pred CCC-------CcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCC--C-CEEEEEeCCCCCeeeec-CCCChHHHH
Q 006171 289 GER-------ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVES--A-PAIVFLKDPGVKPVVYY-GSFNNSRLS 357 (658)
Q Consensus 289 ~~~-------~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~--~-Ptlvlfk~~~~~p~~y~-g~~~~~~L~ 357 (658)
.+. ....++.+|..|+ .+.|+++...+ .....+.||+.. . |.++++...+.+ ..+. +.++.+.|.
T Consensus 145 ~~~~~~~~~~~~~~~~~vAk~~k-ki~F~~~d~~~--~~~~l~~fgl~~~~~~p~~~~~~~~~~k-y~~~~~~~t~~~i~ 220 (250)
T 3ec3_A 145 SFDYRTATQFWRNKVLEVAKDFP-EYTFAIADEED--YATEVKDLGLSESGGDVNAAILDESGKK-FAMEPEEFDSDALR 220 (250)
T ss_dssp STTTHHHHHHHHHHHHHHHTTCT-TSEEEEEETTT--THHHHHHTTCSSCSCSCEEEEECTTSCE-EECCCCSCCHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHhhc-ceeEEEEcHHH--HHHHHHHcCCCccCCCcEEEEEcCCCce-ecCCcccCCHHHHH
Confidence 111 1233455888898 88888875322 345678999974 3 577777543332 2234 678999999
Q ss_pred HHHHhhccCC
Q 006171 358 EVMEQNKLQE 367 (658)
Q Consensus 358 ~fi~~~~~~~ 367 (658)
+|++...-..
T Consensus 221 ~Fv~~~~~Gk 230 (250)
T 3ec3_A 221 EFVMAFKKGK 230 (250)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHCCC
Confidence 9998764443
No 163
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.94 E-value=1e-10 Score=121.32 Aligned_cols=77 Identities=10% Similarity=-0.020 Sum_probs=61.0
Q ss_pred cEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeeccc-c--hhhhHHHhhCCCCcccceeeeeEEEEcCCCCCCCC
Q 006171 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGD-I--RLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSD 231 (658)
Q Consensus 155 ~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e-~--~~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~~ 231 (658)
..+|+||||||+||++++|.|+++|+++ ..|||+. + ....++|++++ |+++||+++ +|
T Consensus 199 ~~vV~F~A~WC~~Ck~l~p~le~lA~~l------~~Vd~d~~d~~~~~~~la~~~g------I~~vPT~~i--~G----- 259 (291)
T 3kp9_A 199 IGGTMYGAYWCPHCQDQKELFGAAFDQV------PYVECSPNGPGTPQAQECTEAG------ITSYPTWII--NG----- 259 (291)
T ss_dssp TTCEEEECTTCHHHHHHHHHHGGGGGGS------CEEESCSSCSSSCCCHHHHTTT------CCSTTEEEE--TT-----
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHc------CEEEEeecCchhhHHHHHHHcC------CcccCeEEE--CC-----
Confidence 3479999999999999999999998655 3677772 1 11356999999 889999655 55
Q ss_pred CcccccCCCCHhHHHHHHHHh
Q 006171 232 CMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 232 ~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
..|.|.++.++|.+|+.-.
T Consensus 260 --~~~~G~~~~~~L~~~l~~~ 278 (291)
T 3kp9_A 260 --RTYTGVRSLEALAVASGYP 278 (291)
T ss_dssp --EEEESCCCHHHHHHHTCCC
T ss_pred --EEecCCCCHHHHHHHHCCC
Confidence 3489999999999997543
No 164
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=98.89 E-value=1.2e-09 Score=99.58 Aligned_cols=88 Identities=9% Similarity=0.127 Sum_probs=71.8
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhc-ccceeeeecccch----------------------hhhHHHhhCCC
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDIR----------------------LATHLAERKPI 208 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g-~~~vg~Vdc~e~~----------------------~~~~Lc~k~~i 208 (658)
.+++++|.||++||++|+.+.|.++++++++.. .+.+..|+++... ....+++.++
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~- 111 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYH- 111 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTT-
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcC-
Confidence 678999999999999999999999999999973 4588999986310 1235888888
Q ss_pred CcccceeeeeEEEEc-CCCCCCCCCcccccCCCCHhHHHHHH
Q 006171 209 GQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWF 249 (658)
Q Consensus 209 ~k~f~V~~yPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv 249 (658)
|.++|+++++ ++|.. ...|.|..+.+.|.+++
T Consensus 112 -----v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 112 -----IITIPTSFLLNEKGEI----EKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp -----CCEESEEEEECTTCCE----EEEEESCCCHHHHHHHH
T ss_pred -----cCccCeEEEEcCCCcE----EEEEcCCcCHHHHHHhh
Confidence 8899999999 55543 45788999999998876
No 165
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=98.89 E-value=1.5e-09 Score=100.61 Aligned_cols=97 Identities=13% Similarity=0.096 Sum_probs=74.0
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchhhhHHHhhCCCC---------------cccc--
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIG---------------QIFF-- 213 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~~~~Lc~k~~i~---------------k~f~-- 213 (658)
.+++++|.||++||++|+...|.++++++++++. +.|..|+++........++++++. +.|.
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 4689999999999999999999999999999654 489999997544333333333221 1233
Q ss_pred eeeeeEEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 214 RRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 214 V~~yPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|.++|+++++ ++|.. ...|.|..+.+.|.+++.+.
T Consensus 103 v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~l 138 (151)
T 3raz_A 103 VGVLPFTVVEAPKCGY----RQTITGEVNEKSLTDAVKLA 138 (151)
T ss_dssp SCCSSEEEEEETTTTE----EEECCSCCCHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCcE----EEEECCCCCHHHHHHHHHHH
Confidence 7899999988 55542 46789999999999999876
No 166
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.89 E-value=6.5e-10 Score=104.10 Aligned_cols=101 Identities=16% Similarity=0.101 Sum_probs=74.5
Q ss_pred EEecCCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceee---------------------------
Q 006171 139 NVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGM--------------------------- 190 (658)
Q Consensus 139 ~~Lt~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~--------------------------- 190 (658)
..++.+.+......+++++|.||++||++|+.+.|.+++++++++.. +.|..
T Consensus 24 ~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (164)
T 2h30_A 24 KTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKL 103 (164)
T ss_dssp EETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTS
T ss_pred CCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcc
Confidence 34444444433346789999999999999999999999999886432 23333
Q ss_pred -eecccchhhhHHHhhCCCCcccceeeeeEEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 191 -VELGDIRLATHLAERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 191 -Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
++++. ...++++++ |.++||++++ ++|.. ...|.|..+.+.|.+++.+.
T Consensus 104 ~~~~d~---~~~~~~~~~------v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~~ 154 (164)
T 2h30_A 104 PVVTDN---GGTIAQNLN------ISVYPSWALIGKDGDV----QRIVKGSINEAQALALIRNP 154 (164)
T ss_dssp CEEECT---TCHHHHHTT------CCSSSEEEEECTTSCE----EEEEESCCCHHHHHHHHHCT
T ss_pred eEEEcC---chHHHHHcC------CCccceEEEECCCCcE----EEEEcCCCCHHHHHHHHHHH
Confidence 44442 234888888 8899999999 56643 45678999999999999876
No 167
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.82 E-value=1.6e-09 Score=101.88 Aligned_cols=96 Identities=9% Similarity=0.066 Sum_probs=65.2
Q ss_pred CCCccc----cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchhhhHHHhhCCCCcccceeeeeE
Q 006171 145 DFPSIF----HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIGQIFFRRGLPS 219 (658)
Q Consensus 145 nF~~~v----~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPT 219 (658)
+|+..+ .+++++||.|||+||++|+.+.|.+.+.....+-. ..+..|+++++. ..++.+++ |.++||
T Consensus 32 ~~~~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~--~~~~~~~~------v~~~PT 103 (151)
T 3ph9_A 32 TYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHET--TDKNLSPD------GQYVPR 103 (151)
T ss_dssp SHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCC--SCGGGCTT------CCCSSE
T ss_pred CHHHHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCc--hhhHhhcC------CCCCCE
Confidence 455554 36899999999999999999999998753221111 367778876321 12556666 889999
Q ss_pred EEEcC-CCCCCCCCcccccCC----------CCHhHHHHHHHHh
Q 006171 220 LVAFP-PGCKSSDCMTRFEGE----------LSVDAVTDWFATA 252 (658)
Q Consensus 220 l~~f~-~g~~~~~~~~~Y~G~----------rs~~~Lv~fv~k~ 252 (658)
+++|. +|.. .....|. .+.+.+++.+++.
T Consensus 104 ~~f~~~~G~~----v~~~~G~~~~~~~~~~~~~~~~ll~~~~~a 143 (151)
T 3ph9_A 104 IMFVDPSLTV----RADIAGRYSNRLYTYEPRDLPLLIENMKKA 143 (151)
T ss_dssp EEEECTTSCB----CTTCCCSCTTSTTCCCGGGHHHHHHHHHHH
T ss_pred EEEECCCCCE----EEEEeCCcCCcccccchhhHHHHHHHHHHH
Confidence 99998 5543 3444565 3455666666655
No 168
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=98.79 E-value=5.5e-09 Score=96.51 Aligned_cols=91 Identities=11% Similarity=0.183 Sum_probs=74.6
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchh-------------------hhHHHhhCCCCcc
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL-------------------ATHLAERKPIGQI 211 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~-------------------~~~Lc~k~~i~k~ 211 (658)
.+++++|.||++||++|+.+.|.++++++.+.+. +.|..|++++... ...+++.++
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 100 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYD---- 100 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTT----
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcC----
Confidence 4689999999999999999999999999999874 5889999874310 234777787
Q ss_pred cceeeeeEEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 212 FFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 212 f~V~~yPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|.++||++++ ++|.. ...|.|..+.+.|.+++.+.
T Consensus 101 --v~~~P~~~lid~~G~i----~~~~~G~~~~~~l~~~l~~l 136 (151)
T 2f9s_A 101 --VSPLPTTFLINPEGKV----VKVVTGTMTESMIHDYMNLI 136 (151)
T ss_dssp --CCSSCEEEEECTTSEE----EEEEESCCCHHHHHHHHHHH
T ss_pred --CCCCCeEEEECCCCcE----EEEEeCCCCHHHHHHHHHHH
Confidence 8899999998 55543 45678999999999999887
No 169
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.79 E-value=7.1e-09 Score=94.82 Aligned_cols=91 Identities=8% Similarity=-0.045 Sum_probs=69.8
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchh-hhH---------------------HHhhCCC
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL-ATH---------------------LAERKPI 208 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~-~~~---------------------Lc~k~~i 208 (658)
.+++++|.||++||++|+...|.+.++++.+.+. +.+..|+++++.. ... +++.++
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~- 108 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYD- 108 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHC-
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcC-
Confidence 5689999999999999999999999999999876 5899999984321 112 555555
Q ss_pred CcccceeeeeEEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 209 GQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 209 ~k~f~V~~yPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|.++|+++++ ++|.. ...+.|..+.+.+++.+.+.
T Consensus 109 -----i~~~P~~~lid~~G~i----~~~~~g~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 109 -----IYATPVLYVLDKNKVI----IAKRIGYENLDDFLVQYEKS 144 (148)
T ss_dssp -----CCSSCEEEEECTTCBE----EEESCCGGGHHHHHHHHHHH
T ss_pred -----cCCCCEEEEECCCCcE----EEecCCHHHHHHHHHHHHHH
Confidence 8899999999 55542 45567777777777666544
No 170
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=98.78 E-value=4.1e-09 Score=98.58 Aligned_cols=98 Identities=10% Similarity=0.087 Sum_probs=73.3
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchh-hhHHHhhCCCC-----------ccc------
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL-ATHLAERKPIG-----------QIF------ 212 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~-~~~Lc~k~~i~-----------k~f------ 212 (658)
.+++++|.||++||++|+.+.|.+.++++++.+. +.+..|++++... .....+++++. +.|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDG 112 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhcc
Confidence 5689999999999999999999999999999876 5899999985432 12222222110 000
Q ss_pred ceeeeeEEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHHhh
Q 006171 213 FRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (658)
Q Consensus 213 ~V~~yPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v 253 (658)
.|.++|+++++ ++|.. ...|.|..+.+.|.+++.+.+
T Consensus 113 ~i~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~l 150 (165)
T 3or5_A 113 GITGIPTSFVIDASGNV----SGVIVGPRSKADFDRIVKMAL 150 (165)
T ss_dssp CSCSSSEEEEECTTSBE----EEEECSCCCHHHHHHHHHHHH
T ss_pred CCCCCCeEEEECCCCcE----EEEEcCCCCHHHHHHHHHHHH
Confidence 28899999888 55532 456789999999999998873
No 171
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.78 E-value=6.9e-10 Score=106.59 Aligned_cols=75 Identities=17% Similarity=0.267 Sum_probs=60.1
Q ss_pred CCCCccccCCCcEEEEEeccCCCCCCCChH-HH--HHHHHHhhcccceeeeecccchhhhHHHhhC--------CCCccc
Q 006171 144 EDFPSIFHDSKPWLIQVYSDGSYLCGQFSG-AW--KTIAALLEGIANTGMVELGDIRLATHLAERK--------PIGQIF 212 (658)
Q Consensus 144 ~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P-~w--~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~--------~i~k~f 212 (658)
+.|+.....++++||.|||+||++|+.++| .| .++++.+.+.+.+.+||.++++. +++.+ +
T Consensus 30 ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~---l~~~y~~~~q~~~g----- 101 (173)
T 3ira_A 30 EAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPD---IDNIYMTVCQIILG----- 101 (173)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHH---HHHHHHHHHHHHHS-----
T ss_pred HHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCc---HHHHHHHHHHHHcC-----
Confidence 445555567899999999999999999999 45 57888888777889999996543 66666 6
Q ss_pred ceeeeeEEEEcCCCC
Q 006171 213 FRRGLPSLVAFPPGC 227 (658)
Q Consensus 213 ~V~~yPTl~~f~~g~ 227 (658)
|.|+||+++|.+++
T Consensus 102 -v~g~Pt~v~l~~dG 115 (173)
T 3ira_A 102 -RGGWPLNIIMTPGK 115 (173)
T ss_dssp -CCCSSEEEEECTTS
T ss_pred -CCCCcceeeECCCC
Confidence 88999999997443
No 172
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.76 E-value=1.1e-08 Score=93.62 Aligned_cols=88 Identities=13% Similarity=0.052 Sum_probs=69.3
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHh-hcc-cceeeeecccchh----------------------hhHHHhhCC
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALL-EGI-ANTGMVELGDIRL----------------------ATHLAERKP 207 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l-~g~-~~vg~Vdc~e~~~----------------------~~~Lc~k~~ 207 (658)
.+++++|.||++||++|+...|.+.++++.+ .+. +.+..|+++.... ...+++.++
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 4689999999999999999999999999999 665 5888898875321 345888888
Q ss_pred CCcccceeeeeEEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 208 IGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 208 i~k~f~V~~yPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|.++||++++ ++|. ..+... +.+.+.+++.+.
T Consensus 112 ------v~~~P~~~lid~~G~------i~~~~~-~~~~l~~~l~~l 144 (148)
T 3fkf_A 112 ------ILTLPTNILLSPTGK------ILARDI-QGEALTGKLKEL 144 (148)
T ss_dssp ------CCSSSEEEEECTTSB------EEEESC-CHHHHHHHHHHH
T ss_pred ------CCCcCEEEEECCCCe------EEEecC-CHHHHHHHHHHH
Confidence 8899999999 4553 223333 788888888765
No 173
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=98.76 E-value=1.3e-08 Score=93.78 Aligned_cols=91 Identities=13% Similarity=0.092 Sum_probs=73.9
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchh--------------------hhHHHhhCCCCc
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL--------------------ATHLAERKPIGQ 210 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~--------------------~~~Lc~k~~i~k 210 (658)
.+++++|.||++||++|+...|.++++++.+.+. +.+..|+++.+.. ...+++.++
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--- 105 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYL--- 105 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTT---
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcC---
Confidence 4689999999999999999999999999999775 5899999885431 124777777
Q ss_pred ccceeeeeEEEEcC-CCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 211 IFFRRGLPSLVAFP-PGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 211 ~f~V~~yPTl~~f~-~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|.++|+++++. +|.. ...+.|..+.+.|.+++.+.
T Consensus 106 ---v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~ 141 (152)
T 2lja_A 106 ---INGIPRFILLDRDGKI----ISANMTRPSDPKTAEKFNEL 141 (152)
T ss_dssp ---CCSSCCEEEECTTSCE----EESSCCCTTCHHHHHHHHHH
T ss_pred ---cCCCCEEEEECCCCeE----EEccCCCCCHHHHHHHHHHH
Confidence 88999999997 4532 45567888899999998876
No 174
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.74 E-value=1.3e-08 Score=93.89 Aligned_cols=92 Identities=14% Similarity=0.003 Sum_probs=71.8
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccch--------------------hhhHHHhhCCCCc
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIR--------------------LATHLAERKPIGQ 210 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~--------------------~~~~Lc~k~~i~k 210 (658)
.+++++|.||++||++|+...|.++++++.+++. +.|..|+.+.+. ....+++.++
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--- 103 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFG--- 103 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHT---
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcC---
Confidence 5789999999999999999999999999999875 466665532100 1234777887
Q ss_pred ccceeeeeEEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHHhh
Q 006171 211 IFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (658)
Q Consensus 211 ~f~V~~yPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v 253 (658)
|.++||++++ ++|.. ...|.|..+.+.|.+++.+.+
T Consensus 104 ---i~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~ll 140 (153)
T 2l5o_A 104 ---TQVYPTSVLIGKKGEI----LKTYVGEPDFGKLYQEIDTAW 140 (153)
T ss_dssp ---CCSSSEEEEECSSSCC----CEEEESSCCHHHHHHHHHHHH
T ss_pred ---CCccCeEEEECCCCcE----EEEEcCCCCHHHHHHHHHHHH
Confidence 8899999999 55543 456889999999999998763
No 175
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.73 E-value=6.6e-09 Score=93.08 Aligned_cols=90 Identities=14% Similarity=0.047 Sum_probs=69.9
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccc-------------------------hhhhHHHhhC
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI-------------------------RLATHLAERK 206 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~-------------------------~~~~~Lc~k~ 206 (658)
.+++++|.||++||++|+...|.++++++++...+.+..|++... .....+++.+
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETY 100 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHc
Confidence 578999999999999999999999999998665567777754210 0122467777
Q ss_pred CCCcccceeeeeEEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHH
Q 006171 207 PIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (658)
Q Consensus 207 ~i~k~f~V~~yPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k 251 (658)
+ |.++|+++++ ++|.. ...|.|..+.+.|.+++.+
T Consensus 101 ~------v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 101 G------VRSYPTQAFIDKEGKL----VKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp T------CCSSSEEEEECTTCCE----EEEEESCCCHHHHHHHHHH
T ss_pred C------cccCCeEEEECCCCcE----EEeecCCCcHHHHHHHHHh
Confidence 7 8899999999 55543 4678899999999998865
No 176
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.72 E-value=6.3e-09 Score=91.83 Aligned_cols=78 Identities=15% Similarity=0.205 Sum_probs=66.2
Q ss_pred CcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeeeEEEEcCCCCCCCCCc
Q 006171 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCM 233 (658)
Q Consensus 154 ~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~~~~ 233 (658)
...++.|++|||+.|+.+.|..++++.++. +.+..||.++++ .++++++ ++ +|+|++|.+|..
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~d~---~l~~~yg------v~-VP~l~~~~dG~~----- 91 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINIDGNE---HLTRLYN------DR-VPVLFAVNEDKE----- 91 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETTTCH---HHHHHST------TS-CSEEEETTTTEE-----
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECCCCH---HHHHHhC------CC-CceEEEEECCEE-----
Confidence 367999999999999999999999998874 789999999654 4888998 86 999999998853
Q ss_pred ccccCCCCHhHHHHHH
Q 006171 234 TRFEGELSVDAVTDWF 249 (658)
Q Consensus 234 ~~Y~G~rs~~~Lv~fv 249 (658)
. +.|..+.+.|.+|+
T Consensus 92 v-~~g~~~~~~L~~~L 106 (107)
T 2fgx_A 92 L-CHYFLDSDVIGAYL 106 (107)
T ss_dssp E-ECSSCCCHHHHHHH
T ss_pred E-EecCCCHHHHHHHh
Confidence 2 46888889998886
No 177
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.71 E-value=1.4e-07 Score=101.61 Aligned_cols=201 Identities=12% Similarity=0.113 Sum_probs=118.6
Q ss_pred EEEecC-CCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceee
Q 006171 138 FNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (658)
Q Consensus 138 V~~Lt~-~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~ 216 (658)
+..++. ++|+. +..++.++|.||+++|.. ..+.|.++|..+.+...++.+.++ ++++++ |++
T Consensus 120 v~~l~~~~~l~~-l~~~~~~~v~ff~~~~~~---~~~~f~~~A~~~~~~~~F~~~~~~-------~~~~~~------v~~ 182 (382)
T 2r2j_A 120 IQEIRDLAEITT-LDRSKRNIIGYFEQKDSD---NYRVFERVANILHDDCAFLSAFGD-------VSKPER------YSG 182 (382)
T ss_dssp CEEC-------------CCEEEEEESCSSSH---HHHHHHHHHHHHTTTCEEEEEESC-------C--------------
T ss_pred ceecCCHHHHHH-hcCCCCEEEEEECCCCCh---hHHHHHHHHHHhhccceEEEEehh-------hHHhhC------CCC
Confidence 455643 56777 667788999999987653 367899999999888888888874 456666 889
Q ss_pred eeEEEEcCCCCCCCCCcccccCCC-CHhHHHHHHHHhhccCCcceeeccchhhhhhhhhcCCCcEEEEEEeCCCCC--Cc
Q 006171 217 LPSLVAFPPGCKSSDCMTRFEGEL-SVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGER--AS 293 (658)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~r-s~~~Lv~fv~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~~~~~~--~~ 293 (658)
+| +++++.+.. .....|.|.+ +.++|.+|+... .+|.+..++..+ ...+... ..+.+++|...... ..
T Consensus 183 ~p-i~~~~~~~~--~~~~~y~g~~~~~~~l~~fi~~~--~~p~v~elt~~~-~~~~~~~---~~~~~v~f~~~~~~~~~~ 253 (382)
T 2r2j_A 183 DN-IIYKPPGHS--APDMVYLGAMTNFDVTYNWIQDK--CVPLVREITFEN-GEELTEE---GLPFLILFHMKEDTESLE 253 (382)
T ss_dssp CE-EEEECSSSS--SCCEECCSCTTCHHHHHHHHHHH--HSCSSEECCHHH-HHHHHTT---CCCEEEEEECTTCCHHHH
T ss_pred Cc-eEECCCCCC--CcCcccCCCCCCHHHHHHHHHhc--ccCceEecChhh-HHHHhcC---CCcEEEEEecCCchHHHH
Confidence 99 777665332 2347899999 999999999887 367666666655 3444432 23444444432111 11
Q ss_pred HHHHH---HHHhhccCceEEEEEecccccHhHHhhcCCC--CCCEEEEEeCCCCCeeee---cCCCChHHHHHHHHhhcc
Q 006171 294 PFVRQ---ISRNYWAYASFAFVLWREEESSIWWNTFEVE--SAPAIVFLKDPGVKPVVY---YGSFNNSRLSEVMEQNKL 365 (658)
Q Consensus 294 ~~~~~---~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~--~~Ptlvlfk~~~~~p~~y---~g~~~~~~L~~fi~~~~~ 365 (658)
.+... .+..+++.+.|+.+... ....+++.||++ .+|+|+++... .. ..| .+.++.+.|.+|++...-
T Consensus 254 ~~~~~~~~~~~~~~~~i~f~~id~~--~~~~~~~~~gl~~~~~P~i~i~~~~-~~-y~~~~~~~~~~~~~i~~F~~d~~~ 329 (382)
T 2r2j_A 254 IFQNEVARQLISEKGTINFLHADCD--KFRHPLLHIQKTPADCPVIAIDSFR-HM-YVFGDFKDVLIPGKLKQFVFDLHS 329 (382)
T ss_dssp HHHHHHHHHTGGGTTTSEEEEEETT--TTHHHHHHTTCCGGGCSEEEEECSS-CE-EECCCSGGGGSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCeeEEEEEchH--HhHHHHHHcCCCccCCCEEEEEcch-hc-CCCCccccccCHHHHHHHHHHHHC
Confidence 12222 34456677888888633 235678999997 58999987542 21 112 234456789999887544
Q ss_pred CCC
Q 006171 366 QEL 368 (658)
Q Consensus 366 ~~v 368 (658)
..+
T Consensus 330 Gkl 332 (382)
T 2r2j_A 330 GKL 332 (382)
T ss_dssp TTT
T ss_pred CCc
Confidence 433
No 178
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.69 E-value=2.5e-08 Score=91.90 Aligned_cols=91 Identities=12% Similarity=0.055 Sum_probs=71.7
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchhh-------------------hHHHhhCCCCcc
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-------------------THLAERKPIGQI 211 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~~-------------------~~Lc~k~~i~k~ 211 (658)
.+++++|.||++||++|+...|.+.++++.+.+. +.+..|+++.+... ..+++.++
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 102 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYG---- 102 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTT----
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcC----
Confidence 5689999999999999999999999999999876 58889998844311 14667777
Q ss_pred cceeeeeEEEEc-CCCCCCCCCcccccCCC--CHhHHHHHHHHh
Q 006171 212 FFRRGLPSLVAF-PPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (658)
Q Consensus 212 f~V~~yPTl~~f-~~g~~~~~~~~~Y~G~r--s~~~Lv~fv~k~ 252 (658)
|.++|+++++ ++|.. ...+.|.. +.+.|.+++.+.
T Consensus 103 --v~~~P~~~lid~~G~i----~~~~~g~~~~~~~~l~~~i~~~ 140 (152)
T 3gl3_A 103 --VKGMPTSFLIDRNGKV----LLQHVGFRPADKEALEQQILAA 140 (152)
T ss_dssp --CCSSSEEEEECTTSBE----EEEEESCCTTTHHHHHHHHHHH
T ss_pred --CCCCCeEEEECCCCCE----EEEEccCCCcCHHHHHHHHHHH
Confidence 8899998888 55532 34566754 457999999887
No 179
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.66 E-value=2e-08 Score=92.94 Aligned_cols=87 Identities=17% Similarity=0.128 Sum_probs=71.3
Q ss_pred CcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecc---cch---------------------hhhHHHhhCCCC
Q 006171 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG---DIR---------------------LATHLAERKPIG 209 (658)
Q Consensus 154 ~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~---e~~---------------------~~~~Lc~k~~i~ 209 (658)
++++|.||++||++|+...|.+.++++++ .+.+..|+++ ... ....+++.++
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-- 106 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFK-- 106 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSS--
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhC--
Confidence 89999999999999999999999999999 5688889982 100 2345778887
Q ss_pred cccceeeeeEEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 210 QIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 210 k~f~V~~yPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|.++|+++++ ++|.. ...+.|..+.+.|.+++.+.
T Consensus 107 ----v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~ 142 (154)
T 3ia1_A 107 ----VLGQPWTFVVDREGKV----VALFAGRAGREALLDALLLA 142 (154)
T ss_dssp ----BCSSCEEEEECTTSEE----EEEEESBCCHHHHHHHHHHT
T ss_pred ----CCcccEEEEECCCCCE----EEEEcCCCCHHHHHHHHHhc
Confidence 8899998887 55543 45778999999999999887
No 180
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.63 E-value=3.4e-08 Score=94.50 Aligned_cols=97 Identities=11% Similarity=0.114 Sum_probs=72.9
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-c------ceeeeeccc--chhhhHHHhhCCCC------------c
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-A------NTGMVELGD--IRLATHLAERKPIG------------Q 210 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~------~vg~Vdc~e--~~~~~~Lc~k~~i~------------k 210 (658)
.++++||.||++||++|+...|.+++++++++.. + .|..|++++ .......++++++. +
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 4689999999999999999999999999999875 5 899999986 23333455554430 0
Q ss_pred ---ccceeeeeEEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 211 ---IFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 211 ---~f~V~~yPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
.|.|.++|+++++ ++|.. ...|.|..+.+.|.+++.+.
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~l 179 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRP----AAVFLREVTSKDVLDVALPL 179 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCE----EEEECSCCCHHHHHHHHHHH
T ss_pred HhccCCCCCCCeEEEECCCCcE----EEEEcCCCCHHHHHHHHHHH
Confidence 1247899976665 55643 45678999999999998776
No 181
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.62 E-value=4.8e-08 Score=90.45 Aligned_cols=88 Identities=14% Similarity=0.101 Sum_probs=68.2
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchh----------------------hhHHHhhCCC
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL----------------------ATHLAERKPI 208 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~----------------------~~~Lc~k~~i 208 (658)
.+++++|.||++||++|+...|.++++++++.+. +.|..|++++... ...+++.++
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~- 106 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYC- 106 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTT-
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhC-
Confidence 4689999999999999999999999999999876 5899999885211 355888888
Q ss_pred CcccceeeeeEEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 209 GQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 209 ~k~f~V~~yPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|.++||++++ ++|.. ...+ .+.+.|.+++.+.
T Consensus 107 -----v~~~P~~~lid~~G~i----~~~~---~~~~~l~~~l~~l 139 (152)
T 2lrn_A 107 -----IVGFPHIILVDPEGKI----VAKE---LRGDDLYNTVEKF 139 (152)
T ss_dssp -----CCSSCEEEEECTTSEE----EEEC---CCTTHHHHHHHHH
T ss_pred -----CCcCCeEEEECCCCeE----EEee---CCHHHHHHHHHHH
Confidence 8899999999 55532 2222 3456777777665
No 182
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.61 E-value=1.7e-08 Score=94.98 Aligned_cols=89 Identities=17% Similarity=0.106 Sum_probs=67.3
Q ss_pred cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccch--------------------hhhHHHhhCCCCc
Q 006171 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR--------------------LATHLAERKPIGQ 210 (658)
Q Consensus 151 ~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~--------------------~~~~Lc~k~~i~k 210 (658)
..+++++|.||++||++|+.+.|.+++++++ .+.+..|++++.. ....++++++
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--- 122 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLG--- 122 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHT---
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcC---
Confidence 3678999999999999999999999999876 3577777754211 1234777777
Q ss_pred ccceeeeeE-EEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 211 IFFRRGLPS-LVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 211 ~f~V~~yPT-l~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|.++|+ +++.++|.. ...+.|..+.+.+.+++.+.
T Consensus 123 ---v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~ 158 (168)
T 2b1k_A 123 ---VYGAPETFLIDGNGII----RYRHAGDLNPRVWEEEIKPL 158 (168)
T ss_dssp ---CCSSSEEEEECTTSBE----EEEEESCCCHHHHHHTTHHH
T ss_pred ---ccccCEEEEECCCCeE----EEEEeCCCCHHHHHHHHHHH
Confidence 889995 455566643 35678999999999888765
No 183
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.61 E-value=4.4e-08 Score=91.90 Aligned_cols=88 Identities=9% Similarity=0.107 Sum_probs=69.9
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecc------------------cch-hh-------------
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG------------------DIR-LA------------- 199 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~------------------e~~-~~------------- 199 (658)
.+++++|.||++||++|+...|.+++++++++ .+.|..|+++ +.. ..
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 46899999999999999999999999999998 5688888887 221 11
Q ss_pred -----hHHHhhCCCCcccceeeeeEEEEc-CCCCCCCCCcccccCCC-CHhHHHHHHHHh
Q 006171 200 -----THLAERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGEL-SVDAVTDWFATA 252 (658)
Q Consensus 200 -----~~Lc~k~~i~k~f~V~~yPTl~~f-~~g~~~~~~~~~Y~G~r-s~~~Lv~fv~k~ 252 (658)
..+++.|+ |.++||++++ ++|. ..+.|.. +.+.|.+++.+.
T Consensus 115 ~~~d~~~~~~~~~------v~~~P~~~lid~~G~------i~~~g~~~~~~~l~~~l~~l 162 (165)
T 3ha9_A 115 MVMDDGSLVEKFN------VRSIDYIVIMDKSSN------VLYAGTTPSLGELESVIKSV 162 (165)
T ss_dssp EEECCSHHHHHTT------CCSSSEEEEEETTCC------EEEEEESCCHHHHHHHHHHC
T ss_pred EEeChHHHHHHhC------CCCceEEEEEcCCCc------EEEeCCCCCHHHHHHHHHHH
Confidence 24666776 8899999999 5554 2337888 899999988765
No 184
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.60 E-value=3.1e-08 Score=92.11 Aligned_cols=93 Identities=9% Similarity=-0.004 Sum_probs=71.3
Q ss_pred CCCcEEEEEeccCCCCCCC-ChHHHHHHHHHhhcc-cceeeeecc-------cchhhh------------------H---
Q 006171 152 DSKPWLIQVYSDGSYLCGQ-FSGAWKTIAALLEGI-ANTGMVELG-------DIRLAT------------------H--- 201 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~-l~P~w~~~A~~l~g~-~~vg~Vdc~-------e~~~~~------------------~--- 201 (658)
.+++++|.||++||++|+. +.|.++++++++++. +.|..|+++ ...... .
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQR 108 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCS
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccch
Confidence 5789999999999999999 599999999999875 588888862 111111 1
Q ss_pred ---HHhhCCCCcccceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHhh
Q 006171 202 ---LAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (658)
Q Consensus 202 ---Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v 253 (658)
+++.|+ |.++|+++++.+.+. ....|.|..+.+.|.+.+.+.+
T Consensus 109 ~~~~~~~~~------v~~~P~~~lid~~G~---i~~~~~g~~~~~~l~~~i~~ll 154 (160)
T 3lor_A 109 IPSTMKKYR------LEGTPSIILADRKGR---IRQVQFGQVDDFVLGLLLGSLL 154 (160)
T ss_dssp SCHHHHHTT------CCSSSEEEEECTTSB---EEEEEESCCCHHHHHHHHHHHH
T ss_pred hhhHHHhcc------cCccceEEEECCCCc---EEEEecCcCCHHHHHHHHHHHH
Confidence 566666 889999999954332 2456789999999999988763
No 185
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.59 E-value=2.8e-08 Score=91.89 Aligned_cols=89 Identities=11% Similarity=0.097 Sum_probs=68.0
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccch--------------------hhhHHHhhCCCCcc
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR--------------------LATHLAERKPIGQI 211 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~--------------------~~~~Lc~k~~i~k~ 211 (658)
.+++++|.||++||++|+.+.|.+++++++ +.+.+..|++++.. ....+++.++
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 114 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWG---- 114 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTT----
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcC----
Confidence 478999999999999999999999999876 44677777764321 1234777777
Q ss_pred cceeeeeEEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 212 FFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 212 f~V~~yPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|.++|+++++ ++|.. ...+.|..+.+.|.+++.+.
T Consensus 115 --v~~~P~~~~id~~G~i----~~~~~g~~~~~~l~~~l~~~ 150 (156)
T 1kng_A 115 --VYGVPETFVVGREGTI----VYKLVGPITPDNLRSVLLPQ 150 (156)
T ss_dssp --CCSSCEEEEECTTSBE----EEEEESCCCHHHHHHTHHHH
T ss_pred --cCccCeEEEEcCCCCE----EEEEeCCCCHHHHHHHHHHH
Confidence 8899976655 66643 35678999999999888765
No 186
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.59 E-value=4.5e-08 Score=89.22 Aligned_cols=95 Identities=15% Similarity=0.202 Sum_probs=67.8
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHH---HHHHhhcc-cceeeeecccchh-hhHHHhhCCC--------------Cccc
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKT---IAALLEGI-ANTGMVELGDIRL-ATHLAERKPI--------------GQIF 212 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~---~A~~l~g~-~~vg~Vdc~e~~~-~~~Lc~k~~i--------------~k~f 212 (658)
.+++++|.||++||++|+...|.+.+ +.+.+++. +.|..|++++... .....+++++ .+.|
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 46899999999999999999999998 88888765 4888888874322 2223332221 1245
Q ss_pred ceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 213 ~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
.|.++||++++...+. ..+ +..+.+.|.+++.+.
T Consensus 106 ~v~~~P~~~lid~~G~-----i~~-~~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 106 DIRATPTIYLLDGRKR-----VIL-KDTSMEQLIDYLATQ 139 (142)
T ss_dssp CCCSSSEEEEECTTCB-----EEE-CSCCHHHHHHHHHC-
T ss_pred CCCCCCeEEEECCCCC-----EEe-cCCCHHHHHHHHHHH
Confidence 5999999999954433 333 667889999988654
No 187
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.58 E-value=1.8e-08 Score=96.20 Aligned_cols=70 Identities=10% Similarity=0.040 Sum_probs=56.1
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeeeEEEEcCCCCC
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCK 228 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~ 228 (658)
.+++++|.|||+||++|+.+.|.+++++..+. .+.|..||.++++ .+++++.. ..|.++||+++|.+|+.
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d~~~---~~~~~~~~---~~v~~iPt~i~~~~~G~ 122 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKGRAE---DDLRQRLA---LERIAIPLVLVLDEEFN 122 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHHHHH---HHTTTTTT---CSSCCSSEEEEECTTCC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECCCCH---HHHHHHHH---cCCCCcCeEEEECCCCC
Confidence 46789999999999999999999999998764 4688899988543 46666631 12789999999998643
No 188
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.58 E-value=3.7e-08 Score=90.16 Aligned_cols=92 Identities=11% Similarity=0.139 Sum_probs=64.1
Q ss_pred CCcEEEEEeccCCCCCCCChHHHHH---HHHHhhcc-cceeeeecccchhh-hHHHhhCC--------------CCcccc
Q 006171 153 SKPWLIQVYSDGSYLCGQFSGAWKT---IAALLEGI-ANTGMVELGDIRLA-THLAERKP--------------IGQIFF 213 (658)
Q Consensus 153 ~~~~lV~FYapwC~~Ck~l~P~w~~---~A~~l~g~-~~vg~Vdc~e~~~~-~~Lc~k~~--------------i~k~f~ 213 (658)
+++++|.|||+||++|+...|.+.+ +.+.+++. +.|..|+.++.... ....++++ +.+.|.
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYD 110 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcC
Confidence 5899999999999999999999999 99998754 47778888754221 11112221 123455
Q ss_pred eeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHH
Q 006171 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFA 250 (658)
Q Consensus 214 V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~ 250 (658)
|.++||++++...+. ..+.+ .+.+.|.+|+.
T Consensus 111 v~~~P~~~lid~~G~-----i~~~~-~~~~~l~~~l~ 141 (142)
T 3eur_A 111 LRAIPTLYLLDKNKT-----VLLKD-ATLQKVEQYLA 141 (142)
T ss_dssp CTTCSEEEEECTTCB-----EEEEE-ECHHHHHHHHH
T ss_pred CCcCCeEEEECCCCc-----EEecC-CCHHHHHHHHh
Confidence 999999999965443 33333 35778887764
No 189
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.56 E-value=5.3e-08 Score=90.44 Aligned_cols=92 Identities=15% Similarity=0.023 Sum_probs=70.9
Q ss_pred CCCcEEEEEeccCCCCCCCC-hHHHHHHHHHhhcc-cceeeeecc-------cchhhh----------------------
Q 006171 152 DSKPWLIQVYSDGSYLCGQF-SGAWKTIAALLEGI-ANTGMVELG-------DIRLAT---------------------- 200 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l-~P~w~~~A~~l~g~-~~vg~Vdc~-------e~~~~~---------------------- 200 (658)
.+++++|.||++||++|+.. .|.+.++++++++. +.|..|+++ ......
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 47899999999999999997 99999999999754 478888863 111111
Q ss_pred -HHHhhCCCCcccceeeeeEEEEcC-CCCCCCCCcccccCCCCHhHHHHHHHHhh
Q 006171 201 -HLAERKPIGQIFFRRGLPSLVAFP-PGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (658)
Q Consensus 201 -~Lc~k~~i~k~f~V~~yPTl~~f~-~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v 253 (658)
.+++.|+ |.++|+++++. +|.. ...|.|..+.+.|.+.+.+.+
T Consensus 107 ~~~~~~~~------v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~ll 151 (158)
T 3eyt_A 107 PRTMAAYQ------MRGTPSLLLIDKAGDL----RAHHFGDVSELLLGAEIATLL 151 (158)
T ss_dssp CHHHHHTT------CCSSSEEEEECTTSEE----EEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHcC------CCCCCEEEEECCCCCE----EEEEeCCCCHHHHHHHHHHHh
Confidence 3666666 88999998884 5532 456789999999999988763
No 190
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.56 E-value=3.4e-08 Score=90.48 Aligned_cols=70 Identities=10% Similarity=0.040 Sum_probs=57.7
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhc--ccceeeeecccch---------------------hhhHHHhhCCC
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG--IANTGMVELGDIR---------------------LATHLAERKPI 208 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g--~~~vg~Vdc~e~~---------------------~~~~Lc~k~~i 208 (658)
.+++++|.||++||++|+.+.|.++++++++++ .+.|..|++++.. ....++++++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~- 105 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFD- 105 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTT-
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcC-
Confidence 468999999999999999999999999999984 4588889888531 1245888888
Q ss_pred CcccceeeeeEEEEcC--CCC
Q 006171 209 GQIFFRRGLPSLVAFP--PGC 227 (658)
Q Consensus 209 ~k~f~V~~yPTl~~f~--~g~ 227 (658)
|.++||++++. +|.
T Consensus 106 -----v~~~P~~~lid~~~G~ 121 (144)
T 1i5g_A 106 -----VKSIPTLVGVEADSGN 121 (144)
T ss_dssp -----CCSSSEEEEEETTTCC
T ss_pred -----CCCCCEEEEEECCCCc
Confidence 88999999995 553
No 191
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.55 E-value=1.5e-08 Score=86.02 Aligned_cols=73 Identities=23% Similarity=0.217 Sum_probs=59.5
Q ss_pred EEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeeeEEEEcCCCCCCCCCcccc
Q 006171 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRF 236 (658)
Q Consensus 157 lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~~~~~~Y 236 (658)
++.|++|||+.|+.+.|..++++.++ +.+||.++++ .++++++ ++ +|||++ .+|.. .
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-----~~~vdid~~~---~l~~~~g------~~-vPtl~~-~~G~~-----v-- 59 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-----FFSVFIDDDA---ALESAYG------LR-VPVLRD-PMGRE-----L-- 59 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-----EEEEECTTCH---HHHHHHT------TT-CSEEEC-TTCCE-----E--
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-----eEEEECCCCH---HHHHHhC------CC-cCeEEE-ECCEE-----E--
Confidence 78999999999999999998776432 6889999665 4888988 87 999998 76643 2
Q ss_pred cCCCCHhHHHHHHHHh
Q 006171 237 EGELSVDAVTDWFATA 252 (658)
Q Consensus 237 ~G~rs~~~Lv~fv~k~ 252 (658)
.|..+.+.|.+++.+.
T Consensus 60 ~g~~~~~~L~~~l~~~ 75 (87)
T 1ttz_A 60 DWPFDAPRLRAWLDAA 75 (87)
T ss_dssp ESCCCHHHHHHHHHTC
T ss_pred eCCCCHHHHHHHHHHH
Confidence 3888999999998765
No 192
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.54 E-value=4.4e-08 Score=90.06 Aligned_cols=70 Identities=9% Similarity=0.040 Sum_probs=57.8
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhc--ccceeeeecccch---------------------hhhHHHhhCCC
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG--IANTGMVELGDIR---------------------LATHLAERKPI 208 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g--~~~vg~Vdc~e~~---------------------~~~~Lc~k~~i 208 (658)
.+++++|.||++||++|+.+.|.++++++++++ .+.|..|++++.. ....++++++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~- 105 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFN- 105 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTT-
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhC-
Confidence 468999999999999999999999999999973 4588888888532 1345888888
Q ss_pred CcccceeeeeEEEEcC--CCC
Q 006171 209 GQIFFRRGLPSLVAFP--PGC 227 (658)
Q Consensus 209 ~k~f~V~~yPTl~~f~--~g~ 227 (658)
|.++||++++. +|.
T Consensus 106 -----v~~~Pt~~lid~~~G~ 121 (146)
T 1o8x_A 106 -----VESIPTLIGVDADSGD 121 (146)
T ss_dssp -----CCSSSEEEEEETTTCC
T ss_pred -----CCCCCEEEEEECCCCe
Confidence 88999999996 553
No 193
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.51 E-value=7.5e-08 Score=88.86 Aligned_cols=91 Identities=10% Similarity=0.193 Sum_probs=69.5
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccc-hh-h------------------hHHHhhCCCCc
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDI-RL-A------------------THLAERKPIGQ 210 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~-~~-~------------------~~Lc~k~~i~k 210 (658)
.+++++|.||++||++|+...|.++++++.+.+. +.+..|+++.+ .. . ..+++.++
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--- 103 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYG--- 103 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHT---
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhC---
Confidence 5689999999999999999999999999999874 48888988853 11 0 23666777
Q ss_pred ccceeeeeEEEEc-CCCCCCCCCcccccCCC--CHhHHHHHHHHh
Q 006171 211 IFFRRGLPSLVAF-PPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (658)
Q Consensus 211 ~f~V~~yPTl~~f-~~g~~~~~~~~~Y~G~r--s~~~Lv~fv~k~ 252 (658)
|.++|+++++ ++|.. ...+.|.. +.+.+.+++.+.
T Consensus 104 ---v~~~P~~~lid~~G~i----~~~~~g~~~~~~~~l~~~l~~l 141 (154)
T 3kcm_A 104 ---TTGVPETFVIDRHGVI----LKKVVGAMEWDHPEVIAFLNNE 141 (154)
T ss_dssp ---CCSBCEEEEECTTSBE----EEEEESCCCTTSHHHHHHHHTC
T ss_pred ---CCCCCeEEEECCCCcE----EEEEcCCCccccHHHHHHHHHH
Confidence 8899976666 55542 34567765 667888888765
No 194
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.50 E-value=5.2e-08 Score=89.00 Aligned_cols=67 Identities=9% Similarity=0.098 Sum_probs=56.0
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhh--cccceeeeecccch---------------------hhhHHHhhCCC
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE--GIANTGMVELGDIR---------------------LATHLAERKPI 208 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~--g~~~vg~Vdc~e~~---------------------~~~~Lc~k~~i 208 (658)
.+++++|.||++||++|+...|.+++++++++ ..+.+..|+++... ....++++++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 105 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFG- 105 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHT-
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcC-
Confidence 46899999999999999999999999999997 34578888888532 1345778887
Q ss_pred CcccceeeeeEEEEcC
Q 006171 209 GQIFFRRGLPSLVAFP 224 (658)
Q Consensus 209 ~k~f~V~~yPTl~~f~ 224 (658)
|.++||++++.
T Consensus 106 -----v~~~Pt~~lid 116 (144)
T 1o73_A 106 -----VESIPTLITIN 116 (144)
T ss_dssp -----CCSSSEEEEEE
T ss_pred -----CCCCCEEEEEE
Confidence 88999999997
No 195
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.46 E-value=4.2e-06 Score=87.13 Aligned_cols=157 Identities=10% Similarity=0.158 Sum_probs=106.7
Q ss_pred eccchhhhhhhhhcCCCcEEEE-EEeCC---CCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVI-FFSKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl-~f~~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlf 337 (658)
++..+ +++.+.. .+++.+| |+.+- |....|.+..++..+.+.+.++.|.........++++|+|.++||+++|
T Consensus 22 lt~~~-f~~~i~~--~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~Pt~~~~ 98 (298)
T 3ed3_A 22 LTPKS-FDKAIHN--TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPTLMVF 98 (298)
T ss_dssp CCHHH-HHHHHTS--SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBSSEEEEE
T ss_pred eCHHH-HHHHHHh--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCccceEEEE
Confidence 55555 5666632 2344455 44432 2234567777888887778888886553345789999999999999999
Q ss_pred eCCC----------------CCeeeecCCCChHHHHHHHHhhccCCCccccCcchhhhcccccCCcCCCCCCcccEEEEE
Q 006171 338 KDPG----------------VKPVVYYGSFNNSRLSEVMEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVIL 401 (658)
Q Consensus 338 k~~~----------------~~p~~y~g~~~~~~L~~fi~~~~~~~vP~lts~~~~~~~c~~~~~~~~~k~~~~~lcVi~ 401 (658)
+++. ..+..|.|..+.+.|.+|+....-+.+.++++...++..... .. ..+|++
T Consensus 99 ~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~-----~~-----~~~vi~ 168 (298)
T 3ed3_A 99 RPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRK-----SP-----KLSVVL 168 (298)
T ss_dssp ECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTS-----CS-----SEEEEE
T ss_pred ECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhc-----CC-----ceEEEE
Confidence 9864 135679999999999999999877777788776655544421 11 367787
Q ss_pred EcCCChhHHHHHHHHHHHHHhhccccccccccccCCchHHHHhcCCCcEEEEEEecc
Q 006171 402 AGRLSPELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAFRNKRLTFAWLDGE 458 (658)
Q Consensus 402 ~~~~~~~~~~~~~~lr~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~~v~F~wvd~~ 458 (658)
+...+. ....++.+|. .+++ .+.|+.+...
T Consensus 169 fs~~~~----~~~~f~~~A~----------------------~~~~-~~~F~~v~~~ 198 (298)
T 3ed3_A 169 FSKQDK----ISPVYKSIAL----------------------DWLG-KFDFYSISNK 198 (298)
T ss_dssp EESSSS----CCHHHHHHHH----------------------HTBT-TEEEEEEEGG
T ss_pred EcCCCc----chHHHHHHHH----------------------Hhhc-CcEEEEEcch
Confidence 755332 2245666666 5544 5899999764
No 196
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.46 E-value=1e-07 Score=88.96 Aligned_cols=91 Identities=12% Similarity=0.141 Sum_probs=68.6
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhc-ccceeeeecccc----------------hhhhHHHhhCCCCcccce
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDI----------------RLATHLAERKPIGQIFFR 214 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g-~~~vg~Vdc~e~----------------~~~~~Lc~k~~i~k~f~V 214 (658)
.+++++|.||++||++|+...|.++++++++.. .+.+..|++++. .....+++.|+ |
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~------v 113 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYG------A 113 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTT------C
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhC------C
Confidence 468999999999999999999999999999974 358888998751 01245888888 8
Q ss_pred eeeeEEEEc-CCCCCCCCCcccccCCC--CHhHHHHHHHHh
Q 006171 215 RGLPSLVAF-PPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (658)
Q Consensus 215 ~~yPTl~~f-~~g~~~~~~~~~Y~G~r--s~~~Lv~fv~k~ 252 (658)
.++|+++++ ++|. ....|.|.. +..++++.+.+.
T Consensus 114 ~~~P~~~lid~~G~----i~~~~~G~~~~~~~~~~~~~~~~ 150 (158)
T 3hdc_A 114 NRLPDTFIVDRKGI----IRQRVTGGIEWDAPKVVSYLKSL 150 (158)
T ss_dssp CSSSEEEEECTTSB----EEEEEESCCCTTSHHHHHHHHTT
T ss_pred CCcceEEEEcCCCC----EEEEEeCCCccchHHHHHHHHhh
Confidence 899997777 5553 245667754 456666666543
No 197
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.45 E-value=9.7e-08 Score=102.46 Aligned_cols=62 Identities=26% Similarity=0.521 Sum_probs=52.8
Q ss_pred cCcccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC------hHHHHHHHHHHHHHcCChhhhhcccc
Q 006171 37 PSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP------STADFLKIQYAYELLTDPLWKRNYDV 98 (658)
Q Consensus 37 ~d~Y~iLgv~~~a~~~eIk~ayr~l~~~~HPD~~~~------~~~~f~~i~~Aye~L~d~~~R~~YD~ 98 (658)
.++|++||+.+.++.++|+++|+++++++|||+.+. +.++|.+|.+||++|+||++|..||+
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 489999999999999999999999999999998764 34579999999999999999999996
No 198
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.42 E-value=2.3e-07 Score=98.92 Aligned_cols=92 Identities=11% Similarity=-0.047 Sum_probs=73.2
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccch------------------------hhhHHHhhC
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIR------------------------LATHLAERK 206 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~------------------------~~~~Lc~k~ 206 (658)
.++++||.||++||++|+...|.+++++++++.. +.|..|+|++.. ....+++.|
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~y 160 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNY 160 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHc
Confidence 4789999999999999999999999999999874 588889875210 113467777
Q ss_pred CCCcccceeeeeEEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHHhh
Q 006171 207 PIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (658)
Q Consensus 207 ~i~k~f~V~~yPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v 253 (658)
+ |.++||++++ ++|.. ...|.|..+.+.|.+++.+.+
T Consensus 161 g------V~~~Pt~~lID~~G~I----v~~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 161 R------NRYWPAEYLIDATGTV----RHIKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp T------CCEESEEEEECTTSBE----EEEEESBCCHHHHHHHHHHHH
T ss_pred C------CCccCEEEEEeCCCeE----EEEEcCCCCHHHHHHHHHHHH
Confidence 7 8899998888 55542 456789999999999988763
No 199
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.42 E-value=1.7e-07 Score=74.76 Aligned_cols=51 Identities=14% Similarity=0.041 Sum_probs=46.4
Q ss_pred CcccccCccCC---CCHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHcCC
Q 006171 38 SHYDALGIKPY---SSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTD 89 (658)
Q Consensus 38 d~Y~iLgv~~~---a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Aye~L~d 89 (658)
.-|.||||+++ ++.++|+++||+|....|||++ ++.-...+|++|++.|..
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkG-GS~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKG-GSFYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGT-CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCC-CCHHHHHHHHHHHHHHHH
Confidence 45889999999 9999999999999999999996 777889999999999864
No 200
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.41 E-value=2e-07 Score=86.67 Aligned_cols=88 Identities=13% Similarity=-0.013 Sum_probs=67.4
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchhhh--------------------HHHhhCCCCc
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLAT--------------------HLAERKPIGQ 210 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~~~--------------------~Lc~k~~i~k 210 (658)
.+++++|.||++||++|+...|.+.++++++++. +.|..|++++..... .+++.|+
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--- 110 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYN--- 110 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHT---
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcC---
Confidence 3679999999999999999999999999999876 589999988543210 1566666
Q ss_pred ccceeeeeEEEEc-CCCCCCCCCcccccCCCCHhHHHHHH
Q 006171 211 IFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWF 249 (658)
Q Consensus 211 ~f~V~~yPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv 249 (658)
|.++|+++++ ++|.. ...+.|..+.++.+.-.
T Consensus 111 ---v~~~P~~~lid~~G~i----~~~~~g~~~~e~~~~~~ 143 (152)
T 2lrt_A 111 ---VTNLPSVFLVNRNNEL----SARGENIKDLDEAIKKL 143 (152)
T ss_dssp ---CCSCSEEEEEETTTEE----EEETTTCSCHHHHHHHH
T ss_pred ---cccCceEEEECCCCeE----EEecCCHHHHHHHHHHH
Confidence 8899999999 45542 45667877766655433
No 201
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.40 E-value=1.4e-07 Score=89.22 Aligned_cols=68 Identities=9% Similarity=0.089 Sum_probs=56.8
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhc--ccceeeeecccchh---------------------hhHHHhhCCC
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG--IANTGMVELGDIRL---------------------ATHLAERKPI 208 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g--~~~vg~Vdc~e~~~---------------------~~~Lc~k~~i 208 (658)
.++++||.||++||++|++..|.++++++++++ .+.|..|++++... ...+++.|+
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~- 125 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYS- 125 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTT-
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcC-
Confidence 468999999999999999999999999999975 45788888875421 145788888
Q ss_pred CcccceeeeeEEEEcCC
Q 006171 209 GQIFFRRGLPSLVAFPP 225 (658)
Q Consensus 209 ~k~f~V~~yPTl~~f~~ 225 (658)
|.++||++++.+
T Consensus 126 -----v~~~Pt~~lid~ 137 (165)
T 3s9f_A 126 -----VESIPTLIGLNA 137 (165)
T ss_dssp -----CCSSSEEEEEET
T ss_pred -----CCCCCEEEEEeC
Confidence 889999999974
No 202
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.40 E-value=3.7e-07 Score=87.64 Aligned_cols=92 Identities=9% Similarity=0.053 Sum_probs=68.7
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccc--------h------------------hhhHHHhh
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI--------R------------------LATHLAER 205 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~--------~------------------~~~~Lc~k 205 (658)
.+++++|.||++||++|+...|.++++++++.+.+.|..|+++.. . ....+++.
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 111 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKA 111 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHH
Confidence 358999999999999999999999999999976678888888420 0 12246677
Q ss_pred CCCCcccceeeeeEEEEcCCCCCCCCCccccc----------CCCCHhHHHHHHHHhhc
Q 006171 206 KPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFE----------GELSVDAVTDWFATAIL 254 (658)
Q Consensus 206 ~~i~k~f~V~~yPTl~~f~~g~~~~~~~~~Y~----------G~rs~~~Lv~fv~k~v~ 254 (658)
|+ |.++|+++++...+. ..|. |..+.+.|.+.+.+.+.
T Consensus 112 ~~------v~~~P~~~lid~~G~-----i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~ 159 (188)
T 2cvb_A 112 YR------ALRTPEVFLFDERRL-----LRYHGRVNDNPKDPSKVQSHDLEAAIEALLR 159 (188)
T ss_dssp TT------CCEESEEEEECTTCB-----EEEEECSSSCTTCGGGCCCCHHHHHHHHHHT
T ss_pred cC------CCCCCeEEEECCCCc-----EEEEEecCCccccccccCHHHHHHHHHHHHc
Confidence 77 889999999944332 2233 44478889988887643
No 203
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=97.69 E-value=5.8e-08 Score=88.33 Aligned_cols=69 Identities=14% Similarity=0.094 Sum_probs=53.4
Q ss_pred CC-cEEEEEeccCCCCCCCChHHHHHHHHHhh---cccceeeeecccchh-h---------------------hHHHhhC
Q 006171 153 SK-PWLIQVYSDGSYLCGQFSGAWKTIAALLE---GIANTGMVELGDIRL-A---------------------THLAERK 206 (658)
Q Consensus 153 ~~-~~lV~FYapwC~~Ck~l~P~w~~~A~~l~---g~~~vg~Vdc~e~~~-~---------------------~~Lc~k~ 206 (658)
++ +++|.||++||++|+.+.|.+++++++++ ..+.+..|++++... . ..+++.+
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKY 104 (143)
Confidence 45 99999999999999999999999999984 235788888874321 0 2356666
Q ss_pred CCCcccceeeeeEEEEcC-CCC
Q 006171 207 PIGQIFFRRGLPSLVAFP-PGC 227 (658)
Q Consensus 207 ~i~k~f~V~~yPTl~~f~-~g~ 227 (658)
+ |.++||++++. +|.
T Consensus 105 ~------v~~~P~~~lid~~G~ 120 (143)
T 2lus_A 105 G------ITGIPALVIVKKDGT 120 (143)
Confidence 6 89999999997 443
No 204
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.34 E-value=6.1e-07 Score=84.27 Aligned_cols=98 Identities=10% Similarity=0.094 Sum_probs=71.7
Q ss_pred CCCCccc----cCCCcEEEEEeccCCCCCCCChHHH---HHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceee
Q 006171 144 EDFPSIF----HDSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (658)
Q Consensus 144 ~nF~~~v----~~~~~~lV~FYapwC~~Ck~l~P~w---~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~ 216 (658)
.+|+..+ ..++++||.||++||..|+.|...- .++++.++....+.+||.++. ....++++|+ |.+
T Consensus 29 ~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~-~~~~l~~~y~------v~~ 101 (153)
T 2dlx_A 29 GSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSE-EGQRYIQFYK------LGD 101 (153)
T ss_dssp SCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSH-HHHHHHHHHT------CCS
T ss_pred cCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCH-hHHHHHHHcC------CCC
Confidence 4566665 2589999999999999999997543 556666655556677777532 3345888888 889
Q ss_pred eeEEEEcCCC-CCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 217 LPSLVAFPPG-CKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 217 yPTl~~f~~g-~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
+||++++.+. +. ....+.| .+++.+++++.+.
T Consensus 102 ~P~~~fld~~~G~---~l~~~~g-~~~~~fl~~L~~~ 134 (153)
T 2dlx_A 102 FPYVSILDPRTGQ---KLVEWHQ-LDVSSFLDQVTGF 134 (153)
T ss_dssp SSEEEEECTTTCC---CCEEESS-CCHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCc---EeeecCC-CCHHHHHHHHHHH
Confidence 9999999653 32 1344556 8999999988776
No 205
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.33 E-value=5.2e-07 Score=86.33 Aligned_cols=97 Identities=15% Similarity=0.274 Sum_probs=72.5
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhc-ccceeeeecccc--hhhhHHHhhCCCC-------------cccce-
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDI--RLATHLAERKPIG-------------QIFFR- 214 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g-~~~vg~Vdc~e~--~~~~~Lc~k~~i~-------------k~f~V- 214 (658)
.+++++|.||++||++|+...|.++++.++++. .+.|..|+++.. .....+++++++. +.|.+
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 468999999999999999999999999999974 358889998843 3335577777731 11222
Q ss_pred ---eeeeEEEEc-CCCCCCCCCcccccCCCC--HhHHHHHHHHh
Q 006171 215 ---RGLPSLVAF-PPGCKSSDCMTRFEGELS--VDAVTDWFATA 252 (658)
Q Consensus 215 ---~~yPTl~~f-~~g~~~~~~~~~Y~G~rs--~~~Lv~fv~k~ 252 (658)
.++|+++++ ++|.. ...|.|..+ .+.|.+++.+.
T Consensus 139 ~~~~~~P~~~lid~~G~i----~~~~~g~~~~~~~~l~~~l~~l 178 (186)
T 1jfu_A 139 GRALGMPTSVLVDPQGCE----IATIAGPAEWASEDALKLIRAA 178 (186)
T ss_dssp TCCSSSSEEEEECTTSBE----EEEEESCCCTTSHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCCCE----EEEEecCCccCHHHHHHHHHHH
Confidence 389999998 45532 355778764 78899988776
No 206
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.33 E-value=9.2e-07 Score=81.48 Aligned_cols=88 Identities=11% Similarity=0.071 Sum_probs=67.0
Q ss_pred CCCcEEEEEeccCCCC--CCCChHHHHHHHHHh-hcc-cceeeeecccchh----------------------hhHHHhh
Q 006171 152 DSKPWLIQVYSDGSYL--CGQFSGAWKTIAALL-EGI-ANTGMVELGDIRL----------------------ATHLAER 205 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~--Ck~l~P~w~~~A~~l-~g~-~~vg~Vdc~e~~~----------------------~~~Lc~k 205 (658)
.+++++|.||++||++ |+...|.+.++.+++ ++. +.|..|++++.+. ...+++.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 3689999999999999 999999999999999 665 4888888885421 1246777
Q ss_pred CCCCcccceeeeeEEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 206 KPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 206 ~~i~k~f~V~~yPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|+ |.++|+++++ ++|. ..+.. .+.+.+.+.+.+.
T Consensus 112 ~~------v~~~P~~~lid~~G~------i~~~~-~~~~~l~~~l~~l 146 (150)
T 3fw2_A 112 YS------IYKIPANILLSSDGK------ILAKN-LRGEELKKKIENI 146 (150)
T ss_dssp TT------CCSSSEEEEECTTSB------EEEES-CCHHHHHHHHHHH
T ss_pred cC------CCccCeEEEECCCCE------EEEcc-CCHHHHHHHHHHH
Confidence 77 8899999999 4553 22222 2677777777654
No 207
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.33 E-value=3.2e-08 Score=87.49 Aligned_cols=82 Identities=13% Similarity=0.151 Sum_probs=53.8
Q ss_pred CcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccch--hhhHHHhhCCCCcccceeeeeEEEEcCCCCCCCC
Q 006171 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR--LATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSD 231 (658)
Q Consensus 154 ~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~--~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~~ 231 (658)
+++++ ||++||++|+.+.|.+++++.. ..+..||.+.+. ....++++++ |.++||+ |.+|..
T Consensus 20 ~~vv~-f~a~~C~~C~~~~~~l~~~~~~----~~~v~v~~~~~~~~~~~~l~~~~~------v~~~Pt~--~~~g~~--- 83 (116)
T 2e7p_A 20 APVVV-FSKTYCGYCNRVKQLLTQVGAS----YKVVELDELSDGSQLQSALAHWTG------RGTVPNV--FIGGKQ--- 83 (116)
T ss_dssp SSEEE-EECTTCHHHHHHHHHHHHHTCC----CEEEEGGGSTTHHHHHHHHHHHHS------CCSSCEE--EETTEE---
T ss_pred CCEEE-EECCCChhHHHHHHHHHHcCCC----eEEEEccCCCChHHHHHHHHHHhC------CCCcCEE--EECCEE---
Confidence 45555 9999999999999999887543 244445544220 1134888888 8899999 446632
Q ss_pred CcccccCCC---CHhHHHHHHHHh
Q 006171 232 CMTRFEGEL---SVDAVTDWFATA 252 (658)
Q Consensus 232 ~~~~Y~G~r---s~~~Lv~fv~k~ 252 (658)
...|.|.. +.+.|.+++.+.
T Consensus 84 -v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 84 -IGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp -EECHHHHHHHHHTTCHHHHHHHT
T ss_pred -ECChHHHHHHHhCChHHHHHHHc
Confidence 33444443 556677777654
No 208
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.31 E-value=5e-07 Score=87.09 Aligned_cols=91 Identities=9% Similarity=-0.004 Sum_probs=69.5
Q ss_pred CC-cEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccc--------h------------------hhhHHHh
Q 006171 153 SK-PWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDI--------R------------------LATHLAE 204 (658)
Q Consensus 153 ~~-~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~--------~------------------~~~~Lc~ 204 (658)
++ +++|.||++||++|+...|.++++++++... +.|..|+++.. . ....+++
T Consensus 45 gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 124 (196)
T 2ywi_A 45 SDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAK 124 (196)
T ss_dssp CSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHH
T ss_pred CCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHH
Confidence 44 5999999999999999999999999999875 58889998421 0 1224667
Q ss_pred hCCCCcccceeeeeEEEEc-CCCCCCCCCccc---------ccCCCCHhHHHHHHHHhh
Q 006171 205 RKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTR---------FEGELSVDAVTDWFATAI 253 (658)
Q Consensus 205 k~~i~k~f~V~~yPTl~~f-~~g~~~~~~~~~---------Y~G~rs~~~Lv~fv~k~v 253 (658)
.|+ |.++|+++++ ++|.. ... +.|..+.+.|.+.+.+.+
T Consensus 125 ~~~------v~~~P~~~lid~~G~i----~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll 173 (196)
T 2ywi_A 125 AYD------AACTPDFYIFDRDLKC----VYRGQLDDSRPNNGIPVTGESIRAALDALL 173 (196)
T ss_dssp HHT------CCEESEEEEEETTCBE----EEEECSSSCCTTTCCCCCCHHHHHHHHHHH
T ss_pred HhC------CCCCCeEEEEcCCCeE----EEccccCcccccccCccCHHHHHHHHHHHH
Confidence 776 8899999999 45532 222 457778899999988763
No 209
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.31 E-value=3e-07 Score=87.77 Aligned_cols=88 Identities=16% Similarity=0.123 Sum_probs=66.1
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccch--------------------hhhHHHhhCCCCcc
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR--------------------LATHLAERKPIGQI 211 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~--------------------~~~~Lc~k~~i~k~ 211 (658)
.+++++|.||++||++|+...|.+++++++ + +.|..|++++.. ....+++.|+
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~-v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 129 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ--G-VVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLG---- 129 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT--T-CEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHT----
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC--C-CEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcC----
Confidence 478999999999999999999999999876 3 567777753211 1123556666
Q ss_pred cceeeeeEEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 212 FFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 212 f~V~~yPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|.++|+.+++ ++|.. ...|.|..+.+.+.+++.+.
T Consensus 130 --v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~ 165 (176)
T 3kh7_A 130 --VYGAPETYLIDKQGII----RHKIVGVVDQKVWREQLAPL 165 (176)
T ss_dssp --CCSSCEEEEECTTCBE----EEEEESCCCHHHHHHHTHHH
T ss_pred --CCCCCeEEEECCCCeE----EEEEcCCCCHHHHHHHHHHH
Confidence 8899987777 45532 45678999999999888776
No 210
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.26 E-value=1.4e-07 Score=77.97 Aligned_cols=60 Identities=17% Similarity=0.138 Sum_probs=45.3
Q ss_pred EEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeeeEEEEcCCC
Q 006171 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPG 226 (658)
Q Consensus 157 lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g 226 (658)
++.||++||++|+++.|.++++++++.....+..||.+. ....+++++| |+++||+++ +|
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~g------v~~vPt~~i--~g 63 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDK--ARIAEAEKAG------VKSVPALVI--DG 63 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCS--STHHHHHHHT------CCEEEEEEE--TT
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCCh--hhHHHHHHcC------CCcCCEEEE--CC
Confidence 688999999999999999999887664434555555431 1234778888 889999987 55
No 211
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.24 E-value=4.1e-07 Score=85.50 Aligned_cols=97 Identities=13% Similarity=0.040 Sum_probs=73.1
Q ss_pred CCCcEEEEEeccCCCC-CCCChHHHHHHHHHhhc----ccceeeeecccch----hh---------------------hH
Q 006171 152 DSKPWLIQVYSDGSYL-CGQFSGAWKTIAALLEG----IANTGMVELGDIR----LA---------------------TH 201 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~-Ck~l~P~w~~~A~~l~g----~~~vg~Vdc~e~~----~~---------------------~~ 201 (658)
.+++++|.||++||++ |+...|.++++.++++. .+.|..|+++.++ .. ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 4689999999999998 99999999999998874 3588889887321 00 34
Q ss_pred HHhhCCC---------CcccceeeeeEEEEcCCCCCCCCCcccccCCC--CHhHHHHHHHHh
Q 006171 202 LAERKPI---------GQIFFRRGLPSLVAFPPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (658)
Q Consensus 202 Lc~k~~i---------~k~f~V~~yPTl~~f~~g~~~~~~~~~Y~G~r--s~~~Lv~fv~k~ 252 (658)
+++.+++ .+.|.|.+.|+++++.+| . ....|.|.. +.+.|.+.+++.
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G-~---i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEG-R---LVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEETT-E---EEEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEECC-E---EEEEECCCCCCCHHHHHHHHHHh
Confidence 6666664 234668899999999844 3 245667777 888998888653
No 212
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.22 E-value=1.8e-06 Score=81.62 Aligned_cols=96 Identities=8% Similarity=-0.075 Sum_probs=65.2
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeecc--------cchhhhHHH-hhCCCC------------
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELG--------DIRLATHLA-ERKPIG------------ 209 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~--------e~~~~~~Lc-~k~~i~------------ 209 (658)
.+++++|.|||+||+.|+ ..|.++++.+++++. +.|..|+++ ........+ +++++.
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 468999999999999999 999999999999876 588888874 111222233 321110
Q ss_pred -----------cccceeeee------EEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 210 -----------QIFFRRGLP------SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 210 -----------k~f~V~~yP------Tl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
+.|.+.++| +.+++ ++|.. ...|.|..+.+.|.+.+.+.
T Consensus 110 ~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 166 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKV----YERYSSLTKPSSLSETIEEL 166 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCE----EEEECTTSCGGGGHHHHHHH
T ss_pred cchHHHHHHHhccCCcCCCCcccccceEEEECCCCCE----EEEeCCCCCHHHHHHHHHHH
Confidence 124588999 65555 66643 45677888889998888776
No 213
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=98.20 E-value=9.9e-06 Score=75.39 Aligned_cols=133 Identities=13% Similarity=0.216 Sum_probs=83.6
Q ss_pred HHHhhccCCCccccCcchhhhcccccCCcCCCCCCcccEEEEEEcC-CChhHHHHHHHHHHHHHhhccccccccccccCC
Q 006171 359 VMEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGR-LSPELNKMRETIRRVQETLLSDDESNAADTDQS 437 (658)
Q Consensus 359 fi~~~~~~~vP~lts~~~~~~~c~~~~~~~~~k~~~~~lcVi~~~~-~~~~~~~~~~~lr~~a~~~~~~~~~~~~~~~~~ 437 (658)
-|+.|.+|++++++..|... ++.. +. ...++++.. .+.+.+.+++.++.+|+
T Consensus 7 ~~~~~~~PLV~e~t~en~~~-~~~~------~~----~~~~l~f~~~~~~~~~~~~~~~~~vAk---------------- 59 (147)
T 3bj5_A 7 HMKHNQLPLVIEFTEQTAPK-IFGG------EI----KTHILLFLPKSVSDYDGKLSNFKTAAE---------------- 59 (147)
T ss_dssp --------CEEECCTTTHHH-HHSS------SC----CEEEEEECCTTSSSHHHHHHHHHHHHH----------------
T ss_pred chhhccCCeeEEeccccHHH-HhcC------CC----ceEEEEEecCCcHhHHHHHHHHHHHHH----------------
Confidence 46789999999999999744 3321 11 133343443 34457778888888888
Q ss_pred chHHHHhcCCCcEEEEEEec--cchHHHHHHHcccCCcccccCCcCCCCCCCeEEEEEeecCC--ccccceeccccCccc
Q 006171 438 LAPAAVAFRNKRLTFAWLDG--EAQDRYCSFYLFSETSFETCGARRDMSDVPRLFIVRYKRNT--TEDEAKIERKPRNIW 513 (658)
Q Consensus 438 ~~~~A~~~~~~~v~F~wvd~--~~q~~~~~~f~~~~~~~~~c~~~~~~~~~p~vvI~~~~~n~--~~~~~k~~~~~w~~~ 513 (658)
.|++ ++.|+|+|. +...+.++.|-.++ +++|.|+|+ +. .. .||. +
T Consensus 60 ------~fkg-ki~Fv~vd~~~~~~~~~l~~fGl~~------------~~~P~v~i~----~~~~~~--~Ky~------~ 108 (147)
T 3bj5_A 60 ------SFKG-KILFAFIDSDHTDNQRILEFFGLKK------------EECPAVRLI----TLEEEM--TKYK------P 108 (147)
T ss_dssp ------TTTT-TCEEEEECTTCGGGHHHHHHTTCCG------------GGCSEEEEE----ECSSSC--EEEC------C
T ss_pred ------HcCC-ceEEEEEecchHhHHHHHHHcCCCc------------ccCCEEEEE----eccccc--ccCC------C
Confidence 6765 489999999 66667777772221 146999988 43 22 3555 2
Q ss_pred ccccccccCccccchhccCCCCChhHHHHHHHHHhhcCCCCCCCcccCCCCCC-CC
Q 006171 514 DAMQEQEVDPASQLVVRYNGSDEIPQIAKWVSEIIQDGDSKDLPFYRAKTPEL-VP 568 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~g~~~~l~~~~~~~p~l-~~ 568 (658)
+.+ .-+.+.|.+|+++++. +.....++++.+|+= ++
T Consensus 109 ---~~~--------------~~t~~~i~~Fv~d~l~--GkL~p~~KSEpiPe~wn~ 145 (147)
T 3bj5_A 109 ---ESE--------------ELTAERITEFCHRFLE--GKIKPHLMSQELPEDWDK 145 (147)
T ss_dssp ---SCC--------------CCCHHHHHHHHHHHHT--TCSCEEECCSCCCGGGC-
T ss_pred ---Ccc--------------cCCHHHHHHHHHHHHc--CCccccccCCCCCCCcCC
Confidence 222 2255899999999999 677888899999986 54
No 214
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.19 E-value=3.4e-06 Score=78.47 Aligned_cols=91 Identities=12% Similarity=0.015 Sum_probs=69.0
Q ss_pred CCCcEEEEEeccCCCC-CCCChHHHHHHHHHhhc-----ccceeeeecccch-------------------------hhh
Q 006171 152 DSKPWLIQVYSDGSYL-CGQFSGAWKTIAALLEG-----IANTGMVELGDIR-------------------------LAT 200 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~-Ck~l~P~w~~~A~~l~g-----~~~vg~Vdc~e~~-------------------------~~~ 200 (658)
.+++++|.||++||++ |+...|.++++.++++. .+.+..|+++..+ ...
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4689999999999998 99999999999999975 4478888886321 112
Q ss_pred HHHhhCCCCcccceeeee---------------EEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 201 HLAERKPIGQIFFRRGLP---------------SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 201 ~Lc~k~~i~k~f~V~~yP---------------Tl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
.+++.|+ |.+.| +++++ ++|.. ...|.|..+.+.|.+.+.+.
T Consensus 102 ~~~~~~~------v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~l 159 (164)
T 2ggt_A 102 QVARAYR------VYYSPGPKDEDEDYIVDHTIIMYLIGPDGEF----LDYFGQNKRKGEIAASIATH 159 (164)
T ss_dssp HHHHTTT------CCEEEEEECTTSCEEEEECCEEEEECTTSCE----EEEEETTCCHHHHHHHHHHH
T ss_pred HHHHhcC------eEEEecCCCCCCCeeEeccceEEEECCCCeE----EEEeCCCCCHHHHHHHHHHH
Confidence 3666666 88899 55555 56643 45678888999999988776
No 215
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.18 E-value=6e-07 Score=100.72 Aligned_cols=94 Identities=15% Similarity=0.151 Sum_probs=74.3
Q ss_pred EecCCCCCcccc-CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeee
Q 006171 140 VVTSEDFPSIFH-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLP 218 (658)
Q Consensus 140 ~Lt~~nF~~~v~-~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yP 218 (658)
.++.+.++.+.. .....++.||++||++|+.+.|.++++|.++. .+.+.+||.++++ +++++++ |+++|
T Consensus 103 ~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v~~~~vd~~~~~---~~~~~~~------i~svP 172 (521)
T 1hyu_A 103 KEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-RIKHTAIDGGTFQ---NEITERN------VMGVP 172 (521)
T ss_dssp CSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-TEEEEEEETTTCH---HHHHHTT------CCSSS
T ss_pred CCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-ceEEEEEechhhH---HHHHHhC------CCccC
Confidence 355555554443 45667889999999999999999999998875 6789999999554 5999999 88999
Q ss_pred EEEEcCCCCCCCCCcccccCCCCHhHHHHHHHH
Q 006171 219 SLVAFPPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (658)
Q Consensus 219 Tl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k 251 (658)
|+++ +|.. ...|..+.+.|.+|+.+
T Consensus 173 t~~i--~g~~------~~~G~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 173 AVFV--NGKE------FGQGRMTLTEIVAKVDT 197 (521)
T ss_dssp EEEE--TTEE------EEESCCCHHHHHHHHCC
T ss_pred EEEE--CCEE------EecCCCCHHHHHHHHhh
Confidence 9977 5532 24588999999999744
No 216
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.17 E-value=3.1e-06 Score=81.66 Aligned_cols=97 Identities=9% Similarity=-0.080 Sum_probs=70.3
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeeccc--------chhhhHHH-hhCCCC------------
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLA-ERKPIG------------ 209 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e--------~~~~~~Lc-~k~~i~------------ 209 (658)
.++++||.||++||+.|+...|.++++.+++++. +.|..|++++ .....+.+ +++++.
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 4689999999999999999999999999999876 5888998862 22223344 332110
Q ss_pred -----------cccceeeee------EEEE-cCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 210 -----------QIFFRRGLP------SLVA-FPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 210 -----------k~f~V~~yP------Tl~~-f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
+.|.+.++| +.++ -++|.. ...|.|..+.+.|.+.+.+.
T Consensus 127 ~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 183 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVP----VERFSPGASVKDIEKKLIPL 183 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCE----EEEECTTCCHHHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCCccccccceEEEECCCCcE----EEEECCCCCHHHHHHHHHHH
Confidence 013588899 5444 466643 45677888899999988776
No 217
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.17 E-value=8.4e-07 Score=81.07 Aligned_cols=86 Identities=5% Similarity=-0.095 Sum_probs=61.2
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchh-----------------------hhHHHhhCC
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL-----------------------ATHLAERKP 207 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~-----------------------~~~Lc~k~~ 207 (658)
.+++++|.||++||++|+...|.+.++.+++++. +.|..|+++.+.. ...+++.|+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 4689999999999999999999999999998754 4788888774321 123555566
Q ss_pred CCcccceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHH
Q 006171 208 IGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWF 249 (658)
Q Consensus 208 i~k~f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv 249 (658)
|.++|+.+++...+. ..+.+ .+.+++.+++
T Consensus 111 ------v~~~P~~~lid~~G~-----i~~~~-~~~~~l~~~l 140 (143)
T 4fo5_A 111 ------LRKGFKNFLINDEGV-----IIAAN-VTPEKLTEIL 140 (143)
T ss_dssp ------GGGCCCEEEECTTSB-----EEEES-CCHHHHHHHH
T ss_pred ------CCCCCcEEEECCCCE-----EEEcc-CCHHHHHHHH
Confidence 889999888864433 22332 2455665554
No 218
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.44 E-value=2.8e-07 Score=85.79 Aligned_cols=95 Identities=8% Similarity=-0.040 Sum_probs=61.7
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHH-HHHHhh-c-ccceeeeecccchh-hhHHHhhCCC------------Ccccc--
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKT-IAALLE-G-IANTGMVELGDIRL-ATHLAERKPI------------GQIFF-- 213 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~-~A~~l~-g-~~~vg~Vdc~e~~~-~~~Lc~k~~i------------~k~f~-- 213 (658)
.+++++|.||++||++|+...|.+++ +...++ . .+.+..|++++... ...+++++++ .+.|.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 46799999999999999999999998 888776 3 35888888885421 2223332221 12233
Q ss_pred eeeeeEEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHH
Q 006171 214 RRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (658)
Q Consensus 214 V~~yPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k 251 (658)
+.++||++++ ++|.. ...+.| .+.+++.+++.+
T Consensus 112 ~~~~P~~~lid~~G~i----~~~~~g-~~~~~l~~~l~~ 145 (159)
T 2ls5_A 112 DAGITRNVLIDREGKI----VKLTRL-YNEEEFASLVQQ 145 (159)
Confidence 4679999888 55543 233444 445555555433
No 219
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.14 E-value=2.8e-06 Score=84.06 Aligned_cols=90 Identities=10% Similarity=0.119 Sum_probs=67.1
Q ss_pred CC-cEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccc--------h------------------hhhHHHh
Q 006171 153 SK-PWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDI--------R------------------LATHLAE 204 (658)
Q Consensus 153 ~~-~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~--------~------------------~~~~Lc~ 204 (658)
++ ++||.||++||++|+...|.++++++++++. +.|..|+++.. . ....+++
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 137 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAK 137 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHH
Confidence 45 5999999999999999999999999999876 58888998411 0 1234677
Q ss_pred hCCCCcccceeeeeEEEEcCCCCCCCCCcccccC-----------CCCHhHHHHHHHHhh
Q 006171 205 RKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEG-----------ELSVDAVTDWFATAI 253 (658)
Q Consensus 205 k~~i~k~f~V~~yPTl~~f~~g~~~~~~~~~Y~G-----------~rs~~~Lv~fv~k~v 253 (658)
.|+ |.++|+++++-..+. ..|.| ..+.+.|.+.+.+.+
T Consensus 138 ~~~------v~~~P~~~liD~~G~-----i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll 186 (218)
T 3u5r_E 138 AYG------AACTPDFFLYDRERR-----LVYHGQFDDARPGNGKDVTGADLRAAVDAVL 186 (218)
T ss_dssp HHT------CCEESEEEEECTTCB-----EEEEECSSSCCTTSCCCCCCHHHHHHHHHHH
T ss_pred HcC------CCCCCeEEEECCCCc-----EEEeccccccccccccccCHHHHHHHHHHHH
Confidence 777 889999999944433 34554 334677887777663
No 220
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.11 E-value=6.4e-06 Score=77.21 Aligned_cols=91 Identities=10% Similarity=0.018 Sum_probs=69.0
Q ss_pred CCCcEEEEEeccCCCC-CCCChHHHHHHHHHhhc-----ccceeeeecccch-------------------------hhh
Q 006171 152 DSKPWLIQVYSDGSYL-CGQFSGAWKTIAALLEG-----IANTGMVELGDIR-------------------------LAT 200 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~-Ck~l~P~w~~~A~~l~g-----~~~vg~Vdc~e~~-------------------------~~~ 200 (658)
.++++||.||++||++ |+...|.++++.++++. .+.|..|+++.++ ...
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 3689999999999998 99999999999999963 4578888887311 112
Q ss_pred HHHhhCCCCcccceeeee---------------EEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 201 HLAERKPIGQIFFRRGLP---------------SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 201 ~Lc~k~~i~k~f~V~~yP---------------Tl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
.+++.|+ |...| +++++ ++|.. ...|.|..+.+.|.+.+.+.
T Consensus 105 ~~~~~~~------v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~l 162 (171)
T 2rli_A 105 QASHSYR------VYYNAGPKDEDQDYIVDHSIAIYLLNPDGLF----TDYYGRSRSAEQISDSVRRH 162 (171)
T ss_dssp HHHHHSC------CCCEECCCCSSCCCCEECCCEEEEECTTSCE----EEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHhC------eEEEecCCCCCCCeEEeccceEEEECCCCeE----EEEECCCCCHHHHHHHHHHH
Confidence 4667777 77777 65555 56643 45678999999999988776
No 221
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.11 E-value=4e-06 Score=78.42 Aligned_cols=97 Identities=8% Similarity=-0.050 Sum_probs=70.2
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeeccc--------chhhhHHHh-hCCCC------------
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAE-RKPIG------------ 209 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e--------~~~~~~Lc~-k~~i~------------ 209 (658)
.++++||.||++||++|+...|.++++++++++. +.|..|+++. .......++ ++++.
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGE 110 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCC
Confidence 4689999999999999999999999999999876 5888998852 222333455 44321
Q ss_pred ---cc--------cce--eeee---EEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 210 ---QI--------FFR--RGLP---SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 210 ---k~--------f~V--~~yP---Tl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
+. |.+ .++| +.+++ ++|.. ...|.|..+.+.|.+.+.+.
T Consensus 111 ~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 166 (170)
T 2p5q_A 111 NASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQV----VDRYYPTTSPLSLERDIKQL 166 (170)
T ss_dssp TBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCE----EEEECTTSCGGGGHHHHHHH
T ss_pred chHHHHHHHHhcCCCccCCcccccccEEEECCCCCE----EEeeCCCCCHHHHHHHHHHH
Confidence 01 134 6789 65555 66643 45678888888999888776
No 222
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.09 E-value=4.3e-06 Score=79.99 Aligned_cols=97 Identities=12% Similarity=0.091 Sum_probs=69.5
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeeccc--------chhhhHHHhh-CCCC------------
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAER-KPIG------------ 209 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e--------~~~~~~Lc~k-~~i~------------ 209 (658)
.++++||.||++||++|+...|.++++++++++. +.|..|+|++ .....+.+++ +++.
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~ 127 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGT 127 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCCc
Confidence 4689999999999999999999999999999876 5888898862 2233345555 3211
Q ss_pred --c---ccceeeee--------EEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 210 --Q---IFFRRGLP--------SLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 210 --k---~f~V~~yP--------Tl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
. .|.+.++| ++++-++|.. ...|.|..+.+.|.+.+.+.
T Consensus 128 ~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 179 (181)
T 2p31_A 128 GAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKV----VGAWDPTVSVEEVRPQITAL 179 (181)
T ss_dssp TSCHHHHHHHHHHSCCCCSTTCEEEECTTSCE----EEEECTTSCHHHHHHHHHTT
T ss_pred cchhhhhhhhhcCCCccccceeEEEEcCCCCE----EEEeCCCCCHHHHHHHHHHH
Confidence 1 23477888 4555566643 45677888888888887654
No 223
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.07 E-value=2.8e-06 Score=70.35 Aligned_cols=79 Identities=9% Similarity=0.144 Sum_probs=57.4
Q ss_pred EEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchh-hhHHHhhCCCCcccceeeeeEEEEcCCCCCCCCCccc
Q 006171 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRL-ATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTR 235 (658)
Q Consensus 157 lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~-~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~~~~~~ 235 (658)
++.|+++||++|+++.|.+++++.+..+ +.+..||.+++.. ...++++++.+ +.++|++. .+|..
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~-i~~~~vdi~~~~~~~~~l~~~~~~~----~~~vP~i~--~~g~~------- 68 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDD-FQYQYVDIRAEGITKEDLQQKAGKP----VETVPQIF--VDQQH------- 68 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSS-CEEEEECHHHHTCCSHHHHHHTCCC----SCCSCEEE--ETTEE-------
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCC-ceEEEEecccChHHHHHHHHHhCCC----CceeCeEE--ECCEE-------
Confidence 6789999999999999999999987654 6888899874421 13588877633 67999983 35532
Q ss_pred ccCCCCHhHHHHHHHHh
Q 006171 236 FEGELSVDAVTDWFATA 252 (658)
Q Consensus 236 Y~G~rs~~~Lv~fv~k~ 252 (658)
..| .++|.+++.+.
T Consensus 69 i~~---~~~l~~~~~~~ 82 (85)
T 1ego_A 69 IGG---YTDFAAWVKEN 82 (85)
T ss_dssp EES---SHHHHHHHHHH
T ss_pred EEC---HHHHHHHHHHh
Confidence 123 36888887654
No 224
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.07 E-value=1.4e-05 Score=72.13 Aligned_cols=100 Identities=20% Similarity=0.270 Sum_probs=74.4
Q ss_pred CCccee--eccchhhhhhhhhcCCCcEEEE-EEeCCCCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCC
Q 006171 256 LPRIFY--YTKESMGKNFLAKTGPHKVKVI-FFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAP 332 (658)
Q Consensus 256 lP~~~~--it~~~~~~~Fl~~~~~~~v~vl-~f~~~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~P 332 (658)
+|+... +++.+.++.|+.. +.+.|| ||.+.+......+..+|..+ +.+.|+.+. +.++.++|+++ .|
T Consensus 18 gP~~~~~~i~s~~e~e~fi~~---~~v~VVGfF~~~~~~~~~~F~~~A~~~-~d~~F~~t~-----~~~v~~~~~v~-~~ 87 (124)
T 2l4c_A 18 GAAQEPTWLTDVPAAMEFIAA---TEVAVIGFFQDLEIPAVPILHSMVQKF-PGVSFGIST-----DSEVLTHYNIT-GN 87 (124)
T ss_dssp CCSCCCEECCSHHHHHHHHHT---SSEEEEEECSCTTSTHHHHHHHHHHHC-TTSEEEEEC-----CHHHHHHTTCC-SS
T ss_pred CCCCcceEcCCHHHHHHHHhc---CCCEEEEEECCCCChhHHHHHHHHHhC-CCceEEEEC-----hHHHHHHcCCC-CC
Confidence 565544 6655558889864 335555 55443333356667788888 788898874 45699999998 79
Q ss_pred EEEEEeCCCCCeeeecC----CCChHHHHHHHHhhcc
Q 006171 333 AIVFLKDPGVKPVVYYG----SFNNSRLSEVMEQNKL 365 (658)
Q Consensus 333 tlvlfk~~~~~p~~y~g----~~~~~~L~~fi~~~~~ 365 (658)
+|++|++++++++.|.| .++.+.|.+||+.|++
T Consensus 88 ~vvlfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n~l 124 (124)
T 2l4c_A 88 TICLFRLVDNEQLNLEDEDIESIDATKLSRFIEINSL 124 (124)
T ss_dssp CEEEEETTTTEEEEECHHHHTTCCHHHHHHHHHHHCC
T ss_pred eEEEEEcCCCCceeecCcccCCCCHHHHHHHHHHhcC
Confidence 99999998888888986 7899999999998864
No 225
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.03 E-value=1.3e-06 Score=75.82 Aligned_cols=81 Identities=11% Similarity=0.031 Sum_probs=59.8
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeeeEEEEcCCCCCCCC
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSD 231 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~~ 231 (658)
...+.++.|+++||++|+.+.|.+++++.. +.+..||.++. ....++++++ . ++|++ |.+|..
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~~~----i~~~~vdi~~~-~~~el~~~~g-~------~vP~l--~~~g~~--- 76 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYKDR----FILQEVDITLP-ENSTWYERYK-F------DIPVF--HLNGQF--- 76 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTSSS----SEEEEEETTSS-TTHHHHHHSS-S------SCSEE--EESSSE---
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhhhC----CeEEEEECCCc-chHHHHHHHC-C------CCCEE--EECCEE---
Confidence 456789999999999999999988876532 68899999821 1245888886 4 89987 345532
Q ss_pred CcccccCCCCHhHHHHHHHHh
Q 006171 232 CMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 232 ~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
. ..|..+.+.|.+++.+.
T Consensus 77 --~-~~~g~~~~~l~~~l~~~ 94 (100)
T 1wjk_A 77 --L-MMHRVNTSKLEKQLRKL 94 (100)
T ss_dssp --E-EESSCCHHHHHHHHHSS
T ss_pred --E-EecCCCHHHHHHHHHHH
Confidence 2 34567888999998765
No 226
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.03 E-value=9.6e-06 Score=78.00 Aligned_cols=97 Identities=10% Similarity=0.026 Sum_probs=68.6
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeeccc--------chhhhHHHh-hCCCC------------
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAE-RKPIG------------ 209 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e--------~~~~~~Lc~-k~~i~------------ 209 (658)
.++++||.||++||++|+...|.+.++.+++++. +.|..|+++. .....+.++ ++++.
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 124 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCCc
Confidence 4689999999999999999999999999999876 5888888752 122222333 22210
Q ss_pred --------------cccceeeee---EEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 210 --------------QIFFRRGLP---SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 210 --------------k~f~V~~yP---Tl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
+.|.+.++| +.+++ ++|.. ...|.|..+.+.|.+.+.+.
T Consensus 125 ~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i----~~~~~g~~~~~~l~~~i~~l 181 (187)
T 3dwv_A 125 NAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVP----VERFSPGASVKDIEEKLIPL 181 (187)
T ss_dssp -CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCE----EEEECTTCCHHHHHHHHHHH
T ss_pred chhHHHHHHHhhcCCccCCCccccceeEEEECCCCCE----EEEECCCCCHHHHHHHHHHH
Confidence 122345666 76666 56643 45678888999999998876
No 227
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.02 E-value=2.7e-06 Score=84.18 Aligned_cols=84 Identities=14% Similarity=0.155 Sum_probs=59.8
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeee----------------------------------------
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMV---------------------------------------- 191 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~V---------------------------------------- 191 (658)
+.++.++.|+++||++|+++.|.++++++. + +.+.-+
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~--~-v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~ 161 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL--G-ITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPA 161 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT--T-EEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC--C-cEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChh
Confidence 467899999999999999999999998753 1 111100
Q ss_pred eccc-chhhhHHHhhCCCCcccceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 192 ELGD-IRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 192 dc~e-~~~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
+|.. -.....+++++| |++.||+ +|.+| ..+.|..+.+.|.+++.+.
T Consensus 162 ~~~~~v~~~~~l~~~~g------V~gtPt~-v~~dG-------~~~~G~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 162 SCDVDIADHYALGVQLG------VSGTPAV-VLSNG-------TLVPGYQPPKEMKEFLDEH 209 (216)
T ss_dssp CCSCCHHHHHHHHHHHT------CCSSSEE-ECTTS-------CEEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC------CCccCEE-EEcCC-------eEecCCCCHHHHHHHHHHh
Confidence 2321 112344788888 8899999 56565 2457989999999988765
No 228
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.01 E-value=8e-06 Score=76.29 Aligned_cols=97 Identities=8% Similarity=-0.049 Sum_probs=66.7
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeeccc--------chhhhHHH-hhCCCC------------
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLA-ERKPIG------------ 209 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e--------~~~~~~Lc-~k~~i~------------ 209 (658)
.+++++|.||++||++|+...|.++++.+++++. +.|..|+++. .......+ +++++.
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNGS 109 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecCc
Confidence 4689999999999999999999999999999875 5888998852 11223342 443221
Q ss_pred ---ccc--------c-----eeeeeEEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 210 ---QIF--------F-----RRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 210 ---k~f--------~-----V~~yPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
..| . |+++|+.+++ ++|.. ...|.|..+.+.|.+.+.+.
T Consensus 110 ~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 165 (169)
T 2v1m_A 110 DADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQP----VKRYSPTTAPYDIEGDIMEL 165 (169)
T ss_dssp TSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCE----EEEECTTSCGGGGHHHHHHH
T ss_pred cccHHHHHHHhhcCCccCCcccccceEEEECCCCCE----EEEcCCCCCHHHHHHHHHHH
Confidence 011 2 3345766666 55542 45677888888888887765
No 229
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=97.96 E-value=1.3e-05 Score=76.92 Aligned_cols=91 Identities=12% Similarity=0.052 Sum_probs=68.1
Q ss_pred CCCcEEEEEe-ccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchh----------------------hhHHHhhCC
Q 006171 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL----------------------ATHLAERKP 207 (658)
Q Consensus 152 ~~~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~----------------------~~~Lc~k~~ 207 (658)
.+++++|.|| ++||++|+...|.+.+++++++.. +.|..|+++.... ...+++.|+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFD 109 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhC
Confidence 3589999999 999999999999999999999764 4788888774211 123555565
Q ss_pred CCccccee------eeeEEEEc-CCCCCCCCCcccccCC----CCHhHHHHHHHHh
Q 006171 208 IGQIFFRR------GLPSLVAF-PPGCKSSDCMTRFEGE----LSVDAVTDWFATA 252 (658)
Q Consensus 208 i~k~f~V~------~yPTl~~f-~~g~~~~~~~~~Y~G~----rs~~~Lv~fv~k~ 252 (658)
|. ++|+++++ ++|.. ...+.|. ++.+.|.+.+.+.
T Consensus 110 ------v~~~~~g~~~P~~~lid~~G~i----~~~~~g~~~~~~~~~~l~~~l~~l 155 (187)
T 1we0_A 110 ------VLNEETGLADRGTFIIDPDGVI----QAIEINADGIGRDASTLINKVKAA 155 (187)
T ss_dssp ------CEETTTTEECEEEEEECTTSBE----EEEEEECTTSCCCTTHHHHHHHHH
T ss_pred ------CCcCCCCceeeEEEEECCCCeE----EEEEecCCCCCCCHHHHHHHHHHH
Confidence 88 99999999 45532 3445554 3788898888765
No 230
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=97.88 E-value=1.1e-05 Score=78.10 Aligned_cols=98 Identities=12% Similarity=0.029 Sum_probs=67.4
Q ss_pred CCCcEEEEEe-ccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchhhhHHHhhC----C------------CCcccc
Q 006171 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK----P------------IGQIFF 213 (658)
Q Consensus 152 ~~~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~~~~Lc~k~----~------------i~k~f~ 213 (658)
.+++++|.|| ++||++|+...|.+.++.++++.. +.|..|+++........++++ + +.+.|.
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 123 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAG 123 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHT
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhC
Confidence 3579999999 999999999999999999999864 578888877422222222221 0 112344
Q ss_pred ee-----eeeEEEEcCCCCCCCCCcccccCC----CCHhHHHHHHHHh
Q 006171 214 RR-----GLPSLVAFPPGCKSSDCMTRFEGE----LSVDAVTDWFATA 252 (658)
Q Consensus 214 V~-----~yPTl~~f~~g~~~~~~~~~Y~G~----rs~~~Lv~fv~k~ 252 (658)
|. ++|+++++...+. ....+.|. ++.+.|.+.+.+.
T Consensus 124 v~~~~g~~~P~~~lid~~G~---i~~~~~g~~~~~~~~~~l~~~l~~l 168 (195)
T 2bmx_A 124 VLNADGVADRVTFIVDPNNE---IQFVSATAGSVGRNVDEVLRVLDAL 168 (195)
T ss_dssp CBCTTSSBCEEEEEECTTSB---EEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred CcccCCCccceEEEEcCCCe---EEEEEecCCCCCCCHHHHHHHHHHH
Confidence 88 9999999854332 23344454 3788898888776
No 231
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=97.88 E-value=1.1e-05 Score=76.44 Aligned_cols=33 Identities=3% Similarity=0.094 Sum_probs=29.4
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhc
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG 184 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g 184 (658)
+.++.+++|+++||+||+++.|..+++.++...
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~ 53 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN 53 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC
Confidence 567899999999999999999999999887644
No 232
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=97.88 E-value=1.7e-05 Score=76.91 Aligned_cols=91 Identities=9% Similarity=0.034 Sum_probs=67.2
Q ss_pred CCCcEEEEEe-ccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchh-------------------------hhHHHh
Q 006171 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL-------------------------ATHLAE 204 (658)
Q Consensus 152 ~~~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~-------------------------~~~Lc~ 204 (658)
.+++++|.|| ++||++|+...|.+.++.++++.. +.|..|+++.... ...+++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 3579999999 999999999999999999999765 4788888774211 123555
Q ss_pred hCCCCccccee-----eeeEEEEc-CCCCCCCCCcccccCCC----CHhHHHHHHHHh
Q 006171 205 RKPIGQIFFRR-----GLPSLVAF-PPGCKSSDCMTRFEGEL----SVDAVTDWFATA 252 (658)
Q Consensus 205 k~~i~k~f~V~-----~yPTl~~f-~~g~~~~~~~~~Y~G~r----s~~~Lv~fv~k~ 252 (658)
.|+ |. ++|+.+++ ++|.. ...+.|.. +.++|.+.+.+.
T Consensus 112 ~~~------v~~~~g~~~P~~~lid~~G~i----~~~~~g~~~~~~~~~~l~~~l~~l 159 (198)
T 1zof_A 112 DYD------VLFEEAIALRGAFLIDKNMKV----RHAVINDLPLGRNADEMLRMVDAL 159 (198)
T ss_dssp HTT------CEETTTEECEEEEEEETTTEE----EEEEEESSSCCCHHHHHHHHHHHH
T ss_pred HhC------CcccCCcccceEEEECCCCEE----EEEEecCCCCCCCHHHHHHHHHHH
Confidence 555 88 99999888 45532 34455543 678888887665
No 233
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=97.84 E-value=1.3e-05 Score=76.56 Aligned_cols=96 Identities=5% Similarity=-0.089 Sum_probs=65.0
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeeccc--------chhhhHHHhhCCCC-------------
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAERKPIG------------- 209 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e--------~~~~~~Lc~k~~i~------------- 209 (658)
.++++||.||++||+.|+...|.++++.+++++. +.|..|+++. .....+.++++++.
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 125 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDD 125 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSSTT
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCcc
Confidence 4689999999999999999999999999999875 5888898752 12233455554321
Q ss_pred --ccc----------c-----eeeeeEEEEc-CCCCCCCCCcccccCCCCHhHHHHHHHH
Q 006171 210 --QIF----------F-----RRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (658)
Q Consensus 210 --k~f----------~-----V~~yPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k 251 (658)
+.| . |+.+|+++++ ++|.. ...|.|..+.+.|.+.+.+
T Consensus 126 ~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~ 181 (183)
T 2obi_A 126 AHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCV----VKRYGPMEEPLVIEKDLPH 181 (183)
T ss_dssp SCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCE----EEEECTTSCTHHHHTTSGG
T ss_pred hhHHHHHhhccCCCCCcccccccccceEEEECCCCCE----EEEeCCCCCHHHHHHHHHH
Confidence 011 1 3335887666 45532 3456777777777665543
No 234
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=97.81 E-value=1.4e-05 Score=74.16 Aligned_cols=87 Identities=11% Similarity=0.011 Sum_probs=60.5
Q ss_pred CcEEEEEe-ccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchh--------------------hhHHHhhCCCCcc
Q 006171 154 KPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL--------------------ATHLAERKPIGQI 211 (658)
Q Consensus 154 ~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~--------------------~~~Lc~k~~i~k~ 211 (658)
++++|.|| ++||++|+...|.+.++++++++. +.|..|+++.... ...+++.|+
T Consensus 37 ~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---- 112 (160)
T 1xvw_A 37 KNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYG---- 112 (160)
T ss_dssp CEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTT----
T ss_pred CCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcC----
Confidence 48999998 999999999999999999998754 4788888763211 234666676
Q ss_pred ccee----eee--EEEEc-CCCCCCCCCcccccCCC----CHhHHHHHHH
Q 006171 212 FFRR----GLP--SLVAF-PPGCKSSDCMTRFEGEL----SVDAVTDWFA 250 (658)
Q Consensus 212 f~V~----~yP--Tl~~f-~~g~~~~~~~~~Y~G~r----s~~~Lv~fv~ 250 (658)
|. ++| +.+++ ++|.. ...|.|.. ..+.+++.+.
T Consensus 113 --v~~~~~~~p~~~~~lid~~G~i----~~~~~g~~~~~~~~~~l~~~l~ 156 (160)
T 1xvw_A 113 --VFNEQAGIANRGTFVVDRSGII----RFAEMKQPGEVRDQRLWTDALA 156 (160)
T ss_dssp --CEETTTTEECSEEEEECTTSBE----EEEEECCTTCCCCHHHHHHHHH
T ss_pred --CccccCCCeeeeEEEECCCCeE----EEEEecCCCCCCCHHHHHHHHH
Confidence 88 999 55554 56643 34455654 3455555543
No 235
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.80 E-value=1.7e-05 Score=74.03 Aligned_cols=79 Identities=14% Similarity=0.090 Sum_probs=57.9
Q ss_pred CCc-EEEEEe-ccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchhh------------------hHHHhhCCCCcc
Q 006171 153 SKP-WLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA------------------THLAERKPIGQI 211 (658)
Q Consensus 153 ~~~-~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~~------------------~~Lc~k~~i~k~ 211 (658)
+++ ++|.|| ++||++|+...|.+.++++++++. +.|..|+++..... ..+++.|+
T Consensus 28 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 103 (161)
T 3drn_A 28 GKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYG---- 103 (161)
T ss_dssp TTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTT----
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcC----
Confidence 455 999999 999999999999999999999876 47888887732221 23566666
Q ss_pred cceee----eeEEEEcCCCCCCCCCcccccCCC
Q 006171 212 FFRRG----LPSLVAFPPGCKSSDCMTRFEGEL 240 (658)
Q Consensus 212 f~V~~----yPTl~~f~~g~~~~~~~~~Y~G~r 240 (658)
|.+ +|+.+++-..+. ....|.|..
T Consensus 104 --v~~~~~~~P~~~lid~~G~---i~~~~~g~~ 131 (161)
T 3drn_A 104 --AKGFILPARITFVIDKKGI---IRHIYNSQM 131 (161)
T ss_dssp --CCCSSSCCCEEEEECTTSB---EEEEEECSS
T ss_pred --CCCcCcccceEEEECCCCE---EEEEEecCC
Confidence 888 999888854332 234566733
No 236
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=97.79 E-value=3.7e-05 Score=75.58 Aligned_cols=43 Identities=9% Similarity=-0.188 Sum_probs=38.7
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeecc
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELG 194 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~ 194 (658)
.++++||.|||.||+.|++..|.++++.+++++. +.|..|+|+
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 4689999999999999999999999999999876 488889886
No 237
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=97.78 E-value=2.7e-05 Score=74.61 Aligned_cols=56 Identities=4% Similarity=-0.187 Sum_probs=44.7
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeeccc--------chhhhHHHhhCC
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAERKP 207 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e--------~~~~~~Lc~k~~ 207 (658)
.+++++|.||++||+.|+...|.++++.+++++. +.|..|+|+. .....+.+++++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~ 112 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYN 112 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHTT
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHHHcC
Confidence 4689999999999999999999999999999876 4888898862 122344666665
No 238
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=97.77 E-value=4.1e-05 Score=72.88 Aligned_cols=97 Identities=11% Similarity=0.051 Sum_probs=66.6
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeeccc--------chhhhHHHhh-CCCCcc----------
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAER-KPIGQI---------- 211 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e--------~~~~~~Lc~k-~~i~k~---------- 211 (658)
.++++||.||++||+.|+...|.++++.+++++. +.|..|+|+. .......+++ +++.-+
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 116 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGS 116 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccCc
Confidence 4679999999999999999999999999999876 4788887752 2233445666 442200
Q ss_pred -----cc-----eeeeeE-----EEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 212 -----FF-----RRGLPS-----LVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 212 -----f~-----V~~yPT-----l~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|. +.+.|+ +++-++|.. ...|.|..+.+.|.+.+.+.
T Consensus 117 ~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 168 (180)
T 3kij_A 117 EGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQV----VKFWRPEEPIEVIRPDIAAL 168 (180)
T ss_dssp TCCHHHHHHHHHHTCCCSSTTCEEEECTTSCE----EEEECTTCCGGGTHHHHHHH
T ss_pred cccHHHHHHHhcCCCCccccceEEEECCCCCE----EEEECCCCCHHHHHHHHHHH
Confidence 00 112564 555566643 45677888877777776655
No 239
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=97.76 E-value=1.3e-05 Score=79.05 Aligned_cols=83 Identities=17% Similarity=0.195 Sum_probs=58.5
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhccccee------------------ee----------------------
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTG------------------MV---------------------- 191 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg------------------~V---------------------- 191 (658)
+.++.++.|+++||+||+++.|..+++++. + +++- .+
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~--~-v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~ 161 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL--G-ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEV 161 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT--T-EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC--C-cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChH
Confidence 567899999999999999999999887652 2 1111 00
Q ss_pred eccc-chhhhHHHhhCCCCcccceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHH
Q 006171 192 ELGD-IRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (658)
Q Consensus 192 dc~e-~~~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k 251 (658)
.|.. -.....+++++| |+|.||+++ .+|. .+.|..+.+.|.+++.+
T Consensus 162 ~~~~~v~~~~~l~~~~g------V~gTPt~vi-~nG~-------~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 162 KTPNIVKKHYELGIQFG------VRGTPSIVT-STGE-------LIGGYLKPADLLRALEE 208 (211)
T ss_dssp CCSSHHHHHHHHHHHHT------CCSSCEEEC-TTSC-------CCCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC------CCcCCEEEE-eCCE-------EecCCCCHHHHHHHHHh
Confidence 1221 012234778888 899999987 5663 34788899999998865
No 240
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=97.76 E-value=1.6e-05 Score=76.96 Aligned_cols=92 Identities=13% Similarity=-0.019 Sum_probs=66.4
Q ss_pred CCCcEEEEEe-ccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchhh-------------------------hHHHh
Q 006171 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-------------------------THLAE 204 (658)
Q Consensus 152 ~~~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~~-------------------------~~Lc~ 204 (658)
.+++++|.|| ++||++|....|.+.+++++++.. +.|..|+++..... ..+++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 112 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSE 112 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHH
Confidence 3578999999 999999999999999999999764 48888888742211 23555
Q ss_pred hCCCCccccee------eeeEEEEcCCCCCCCCCcccccC----CCCHhHHHHHHHHh
Q 006171 205 RKPIGQIFFRR------GLPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (658)
Q Consensus 205 k~~i~k~f~V~------~yPTl~~f~~g~~~~~~~~~Y~G----~rs~~~Lv~fv~k~ 252 (658)
.|+ |. ++|+.+++-..+. ....+.| .++.+.+++.+...
T Consensus 113 ~~g------v~~~~~~~~~P~~~lid~~G~---i~~~~~g~~~~~~~~~e~l~~l~~l 161 (197)
T 1qmv_A 113 DYG------VLKTDEGIAYRGLFIIDGKGV---LRQITVNDLPVGRSVDEALRLVQAF 161 (197)
T ss_dssp HTT------CEETTTTEECEEEEEECTTSB---EEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcC------CccCCCCceeeEEEEECCCCc---EEEEEeCCCCCCCCHHHHHHHHHhc
Confidence 555 87 7998888844332 1233334 45678888888664
No 241
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=97.74 E-value=1.5e-05 Score=71.97 Aligned_cols=94 Identities=6% Similarity=0.010 Sum_probs=76.7
Q ss_pred EEec-CCCCCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeee
Q 006171 139 NVVT-SEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (658)
Q Consensus 139 ~~Lt-~~nF~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~y 217 (658)
..|+ .++++.++.++++.+|-|+++||+.| .+.|.++|+.+ ....+|.++.. .++++++ +. .
T Consensus 24 ~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d~~F~~t~~~------~v~~~~~------v~-~ 86 (124)
T 2l4c_A 24 TWLTDVPAAMEFIAATEVAVIGFFQDLEIPA---VPILHSMVQKF-PGVSFGISTDS------EVLTHYN------IT-G 86 (124)
T ss_dssp EECCSHHHHHHHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHC-TTSEEEEECCH------HHHHHTT------CC-S
T ss_pred eEcCCHHHHHHHHhcCCCEEEEEECCCCChh---HHHHHHHHHhC-CCceEEEEChH------HHHHHcC------CC-C
Confidence 4454 46688888888999999999999998 78999999999 66789888754 2788888 76 7
Q ss_pred eEEEEcCCCCCCCCCcccccC----CCCHhHHHHHHHHh
Q 006171 218 PSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (658)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G----~rs~~~Lv~fv~k~ 252 (658)
|++++|++... ....|.| ..+.++|.+|+...
T Consensus 87 ~~vvlfkkfde---~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 87 NTICLFRLVDN---EQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp SCEEEEETTTT---EEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred CeEEEEEcCCC---CceeecCcccCCCCHHHHHHHHHHh
Confidence 99999998643 2467886 78999999999765
No 242
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=97.74 E-value=4.8e-05 Score=66.33 Aligned_cols=97 Identities=22% Similarity=0.194 Sum_probs=64.5
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEe-CC---CCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFS-KT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~-~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlf 337 (658)
+++.+.+++.+... .+++.++.|. +- |....|.+..++..|. .+.|+.|... +.++++++|+|.+.||+++|
T Consensus 5 i~~~~~f~~~l~~~-~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~d--~~~~l~~~~~V~~~PT~~~~ 80 (105)
T 3zzx_A 5 VKDQEDFTKQLNEA-GNKLVVIDFYATWCGPCKMIAPKLEELSQSMS-DVVFLKVDVD--ECEDIAQDNQIACMPTFLFM 80 (105)
T ss_dssp CCSHHHHHHHHHHT-TTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TEEEEEEETT--TCHHHHHHTTCCBSSEEEEE
T ss_pred eCCHHHHHHHHHhc-CCCEEEEEEECCCCCCccCCCcchhhhhhccC-CeEEEEEecc--cCHHHHHHcCCCeecEEEEE
Confidence 34433356666543 3567677553 21 2234567777877764 4566666533 35789999999999999999
Q ss_pred eCCCCCeeeecCCCChHHHHHHHHhhc
Q 006171 338 KDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (658)
Q Consensus 338 k~~~~~p~~y~g~~~~~~L~~fi~~~~ 364 (658)
++|. .-..+.| .+.+.|.+||++|+
T Consensus 81 ~~G~-~v~~~~G-~~~~~l~~~i~k~K 105 (105)
T 3zzx_A 81 KNGQ-KLDSLSG-ANYDKLLELVEKNK 105 (105)
T ss_dssp ETTE-EEEEEES-CCHHHHHHHHHHHC
T ss_pred ECCE-EEEEEeC-cCHHHHHHHHHhcC
Confidence 8753 2223567 48889999999875
No 243
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.72 E-value=2.9e-06 Score=82.95 Aligned_cols=53 Identities=11% Similarity=0.141 Sum_probs=43.6
Q ss_pred CCCCccc--cCCCcEEEEEeccCCCCCCCChHHH---HHHHHHhhcccceeeeecccc
Q 006171 144 EDFPSIF--HDSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDI 196 (658)
Q Consensus 144 ~nF~~~v--~~~~~~lV~FYapwC~~Ck~l~P~w---~~~A~~l~g~~~vg~Vdc~e~ 196 (658)
.+|..+. .+.++++|+||++||+||++++|.| +++++.+.+.++|.+++.+.+
T Consensus 102 ~~y~~l~~p~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~ 159 (197)
T 1un2_A 102 KQYTTLEKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFM 159 (197)
T ss_dssp TTEEECSSCCTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSS
T ss_pred CCceEccCCCCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcC
Confidence 4454443 2467999999999999999999999 999999987779999998743
No 244
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=97.69 E-value=0.00015 Score=67.96 Aligned_cols=97 Identities=12% Similarity=0.155 Sum_probs=67.2
Q ss_pred CCCcEEEEEeccCCC-CCCCChHHHHHHHHHhhcc---cceeeeeccc----chhhhHHHhhCCCCc-------------
Q 006171 152 DSKPWLIQVYSDGSY-LCGQFSGAWKTIAALLEGI---ANTGMVELGD----IRLATHLAERKPIGQ------------- 210 (658)
Q Consensus 152 ~~~~~lV~FYapwC~-~Ck~l~P~w~~~A~~l~g~---~~vg~Vdc~e----~~~~~~Lc~k~~i~k------------- 210 (658)
.+++++|.||++||+ +|....|.+.++.++++.. +.|..|+++. .......++++++.-
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 468999999999999 9999999999999998754 6788888862 122233455544220
Q ss_pred ------------------ccceeeeeEEEEc-CCCCCCCCCcccccCCC--CHhHHHHHHHHh
Q 006171 211 ------------------IFFRRGLPSLVAF-PPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (658)
Q Consensus 211 ------------------~f~V~~yPTl~~f-~~g~~~~~~~~~Y~G~r--s~~~Lv~fv~k~ 252 (658)
.|.+.+.|+++++ ++|.. ...|.|.. +.+.|.+.+.+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i----~~~~~g~~~~~~~~l~~~l~~l 170 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKV----LKDYNGVENTPYDDIISDVKSA 170 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEE----EEEEESSSSCCHHHHHHHHHHH
T ss_pred HHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeE----EEEEcCCCCCCHHHHHHHHHHH
Confidence 1235678886666 44532 34566765 478888888765
No 245
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=97.68 E-value=0.00011 Score=65.49 Aligned_cols=97 Identities=15% Similarity=0.089 Sum_probs=65.3
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEe-CC---CCCCcHHHHHHHHhhc-----cCceEEEEEecccccHhHHhhcCCCCCC
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFS-KT---GERASPFVRQISRNYW-----AYASFAFVLWREEESSIWWNTFEVESAP 332 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~-~~---~~~~~~~~~~~A~~~~-----~~~~f~~v~~~~~~s~~l~~~f~V~~~P 332 (658)
++..+ ++..+.. .+++.+|.|. +- |....|.+..+|..|. ..+.|+.|... +...++++|+|.++|
T Consensus 20 l~~~~-f~~~~~~--~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~~P 94 (127)
T 3h79_A 20 LTDET-FDSIVMD--PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGE--KYPDVIERMRVSGFP 94 (127)
T ss_dssp CCTTT-HHHHHTC--TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETT--TCHHHHHHTTCCSSS
T ss_pred CChhh-HHHHHhC--CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcc--ccHhHHHhcCCccCC
Confidence 55555 4555532 2456566553 32 2234566666776543 34566666432 347899999999999
Q ss_pred EEEEEeCCCC-CeeeecCCCChHHHHHHHHhh
Q 006171 333 AIVFLKDPGV-KPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 333 tlvlfk~~~~-~p~~y~g~~~~~~L~~fi~~~ 363 (658)
|+++|++++. .+..|.|..+.+.|.+||+++
T Consensus 95 t~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 95 TMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp EEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 9999998765 346799999999999999875
No 246
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=97.66 E-value=0.00018 Score=72.45 Aligned_cols=98 Identities=15% Similarity=0.210 Sum_probs=72.1
Q ss_pred eccchhhhhhhhhcCCCcEEEE-EEe--CCCCCCcHHHHHHHHhhc--cCceEEEEEecc--cc-cHhHHhhcCCC--CC
Q 006171 262 YTKESMGKNFLAKTGPHKVKVI-FFS--KTGERASPFVRQISRNYW--AYASFAFVLWRE--EE-SSIWWNTFEVE--SA 331 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl-~f~--~~~~~~~~~~~~~A~~~~--~~~~f~~v~~~~--~~-s~~l~~~f~V~--~~ 331 (658)
+++.+ ++..+.. +++.+| |+. +-|. ..|.+..+|..|. ..+.|+.|.+.+ |+ ..+++++|+|. ++
T Consensus 10 Lt~~n-F~~~i~~---~~~vlV~FyA~~pWCg-l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~~~~~ 84 (240)
T 2qc7_A 10 LDTVT-FYKVIPK---SKFVLVKFDTQYPYGE-KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKESY 84 (240)
T ss_dssp CCTTH-HHHHGGG---CSEEEEEECCSSCCSH-HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCCGGGC
T ss_pred CCHHH-HHHHHcC---CCCEEEEEeCCCCCCc-chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCCCCCC
Confidence 55555 4555542 334455 444 4444 6778888888885 357788886554 43 47899999999 99
Q ss_pred CEEEEEeCCC-CCeeeecCCCChHHHHHHHHhhc
Q 006171 332 PAIVFLKDPG-VKPVVYYGSFNNSRLSEVMEQNK 364 (658)
Q Consensus 332 Ptlvlfk~~~-~~p~~y~g~~~~~~L~~fi~~~~ 364 (658)
||+++|+++. ..+..|.|..+.+.|.+|++.+.
T Consensus 85 PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 85 PVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp SEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 9999999876 45778999999999999999864
No 247
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=97.62 E-value=0.00017 Score=66.16 Aligned_cols=97 Identities=13% Similarity=0.087 Sum_probs=69.7
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEe-CCCCC-----CcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFS-KTGER-----ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIV 335 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~-~~~~~-----~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlv 335 (658)
+++.+ +++++.. ...+++|.|. +-+.+ ..|.+..++.+|.+.+.|+.|++. +.++++.+|+|.+.||++
T Consensus 20 vt~~~-F~~~v~~--~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvD--e~~~la~~ygV~siPTli 94 (137)
T 2qsi_A 20 VDEAT-VDDFIAH--SGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAE--AERGLMARFGVAVCPSLA 94 (137)
T ss_dssp ECTTT-HHHHHHT--SSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGG--GHHHHHHHHTCCSSSEEE
T ss_pred cCHhH-HHHHHhc--CCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECC--CCHHHHHHcCCccCCEEE
Confidence 45555 5666542 2235666664 33322 578889999999888888888743 357899999999999999
Q ss_pred EEeCCCCCeeeecCCCChHHHHHHHHhhc
Q 006171 336 FLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (658)
Q Consensus 336 lfk~~~~~p~~y~g~~~~~~L~~fi~~~~ 364 (658)
+||++.. -....|..+.+.|.++++.+.
T Consensus 95 lFkdG~~-v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 95 VVQPERT-LGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEECCEE-EEEEESCCCHHHHHHHHHHHH
T ss_pred EEECCEE-EEEEeCCCCHHHHHHHHHHHh
Confidence 9998742 223578888899999988654
No 248
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=97.62 E-value=4.7e-05 Score=73.26 Aligned_cols=91 Identities=14% Similarity=0.071 Sum_probs=65.0
Q ss_pred CCCcEEEEEe-ccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchhh-------------------------hHHHh
Q 006171 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-------------------------THLAE 204 (658)
Q Consensus 152 ~~~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~~-------------------------~~Lc~ 204 (658)
.+++++|.|| ++||++|....|.+.+++++++.. +.|..|+++..... ..+++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 4578999999 999999999999999999999754 47778887632211 23555
Q ss_pred hCCCCccccee-----eeeEEEEcC-CCCCCCCCcccccC----CCCHhHHHHHHHHh
Q 006171 205 RKPIGQIFFRR-----GLPSLVAFP-PGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (658)
Q Consensus 205 k~~i~k~f~V~-----~yPTl~~f~-~g~~~~~~~~~Y~G----~rs~~~Lv~fv~k~ 252 (658)
.|+ |. .+|+++++- +|.. ...+.| .++.+.+.+.+.+.
T Consensus 110 ~~g------v~~~~g~~~P~~~liD~~G~i----~~~~~g~~~~~~~~~~l~~~l~~l 157 (192)
T 2h01_A 110 SYD------VLFNESVALRAFVLIDKQGVV----QHLLVNNLALGRSVDEILRLIDAL 157 (192)
T ss_dssp HTT------CEETTTEECCEEEEECTTSBE----EEEEEGGGSSGGGHHHHHHHHHHH
T ss_pred HhC------CcCcCCceeeEEEEEcCCCEE----EEEEeCCCCCCCCHHHHHHHHHHH
Confidence 555 88 899999994 5532 233334 34577787777654
No 249
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=97.61 E-value=0.00018 Score=69.05 Aligned_cols=112 Identities=8% Similarity=0.065 Sum_probs=74.3
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEeC---------C--CCCCcHHHHHHHHhhc-----cCceEEEEEecccccHhHHhh
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFSK---------T--GERASPFVRQISRNYW-----AYASFAFVLWREEESSIWWNT 325 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~~---------~--~~~~~~~~~~~A~~~~-----~~~~f~~v~~~~~~s~~l~~~ 325 (658)
+++.+ +++++.+. .+.+++|.|.. + |....|.+..+|..|. +.+.|+.|.+.+ .+.++++
T Consensus 23 lt~~n-F~~~v~~~-~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~--~~~la~~ 98 (178)
T 3ga4_A 23 VTADN-YPLLSRGV-PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNE--VPQLVKD 98 (178)
T ss_dssp CCTTT-HHHHTTCC-TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTT--CHHHHHH
T ss_pred CCHHH-HHHHHccc-CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECcc--CHHHHHH
Confidence 56666 56666432 23455666643 1 1223678888999887 678888887543 5889999
Q ss_pred cCCCCCCEEEEEeCCCCCe-----------eee---cC-CCChHHHHHHHHhhccCCCccccCcchh
Q 006171 326 FEVESAPAIVFLKDPGVKP-----------VVY---YG-SFNNSRLSEVMEQNKLQELPQLRSVTSM 377 (658)
Q Consensus 326 f~V~~~Ptlvlfk~~~~~p-----------~~y---~g-~~~~~~L~~fi~~~~~~~vP~lts~~~~ 377 (658)
|+|.+.|||++|++++..+ ..| .| ..+.+.|.+||.+..-..++-....++-
T Consensus 99 ~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~I~rp~ny~ 165 (178)
T 3ga4_A 99 LKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISITVPQAFNVQ 165 (178)
T ss_dssp TTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCCCCCCSCC--
T ss_pred cCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCccccCCCChH
Confidence 9999999999999986443 234 24 6788899999988544444333334443
No 250
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.60 E-value=1.1e-05 Score=66.11 Aligned_cols=71 Identities=11% Similarity=0.104 Sum_probs=47.6
Q ss_pred EEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeeeEEEEcCCCCCCCCCcccc
Q 006171 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRF 236 (658)
Q Consensus 157 lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~~~~~~Y 236 (658)
++.|+++||++|+++.+.+++. .+.+..+|+++++......++++ +.++|++. .+|. .
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~------~i~~~~vdi~~~~~~~~~~~~~g------~~~vP~~~--~~g~-------~- 60 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR------GFDFEMINVDRVPEAAEALRAQG------FRQLPVVI--AGDL-------S- 60 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTT------CCSSCEEE--ETTE-------E-
T ss_pred EEEEcCCCChhHHHHHHHHHHC------CCCeEEEECCCCHHHHHHHHHhC------CCccCEEE--ECCE-------E-
Confidence 6789999999999988877653 24788899986544333334567 88999983 3442 1
Q ss_pred cCCCCHhHHHHHH
Q 006171 237 EGELSVDAVTDWF 249 (658)
Q Consensus 237 ~G~rs~~~Lv~fv 249 (658)
-|..+.+.|.+++
T Consensus 61 ~~g~~~~~l~~~l 73 (81)
T 1h75_A 61 WSGFRPDMINRLH 73 (81)
T ss_dssp EESCCHHHHGGGS
T ss_pred EecCCHHHHHHHH
Confidence 2334566665554
No 251
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.56 E-value=0.00048 Score=61.21 Aligned_cols=84 Identities=13% Similarity=0.135 Sum_probs=62.7
Q ss_pred CcEEEEEE-eC---CCCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCCh
Q 006171 278 HKVKVIFF-SK---TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (658)
Q Consensus 278 ~~v~vl~f-~~---~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~ 353 (658)
+++.+|.| .+ .|....+.+..++..+.+.+.|+.+.... ...++++|+|..+||+++|++++.....|.|..+.
T Consensus 35 ~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~~~~~~~~~~G~~~~ 112 (130)
T 2dml_A 35 DGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADK--HQSLGGQYGVQGFPTIKIFGANKNKPEDYQGGRTG 112 (130)
T ss_dssp SSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTT--CHHHHHHHTCCSSSEEEEESSCTTSCEECCSCCSH
T ss_pred CCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCC--CHHHHHHcCCCccCEEEEEeCCCCeEEEeecCCCH
Confidence 44555555 33 23345677788888887777777776432 46799999999999999998876546668999999
Q ss_pred HHHHHHHHhh
Q 006171 354 SRLSEVMEQN 363 (658)
Q Consensus 354 ~~L~~fi~~~ 363 (658)
+.|.+|+...
T Consensus 113 ~~l~~~l~~~ 122 (130)
T 2dml_A 113 EAIVDAALSA 122 (130)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 252
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=97.56 E-value=0.00014 Score=72.00 Aligned_cols=91 Identities=13% Similarity=0.090 Sum_probs=66.1
Q ss_pred CCCcEEEEEe-ccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchh-------------------------hhHHHh
Q 006171 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL-------------------------ATHLAE 204 (658)
Q Consensus 152 ~~~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~-------------------------~~~Lc~ 204 (658)
.+++++|.|| +.||+.|+...|.+.+++++++.. +.|..|+++.... ...+++
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~ 134 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISR 134 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHH
Confidence 3589999999 999999999999999999999754 4788888774211 123555
Q ss_pred hCCCCccccee------eeeEEEEcC-CCCCCCCCcccccC----CCCHhHHHHHHHHh
Q 006171 205 RKPIGQIFFRR------GLPSLVAFP-PGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (658)
Q Consensus 205 k~~i~k~f~V~------~yPTl~~f~-~g~~~~~~~~~Y~G----~rs~~~Lv~fv~k~ 252 (658)
.|+ |. ++|+++++- +|.. ...+.| .++.++|.+.+...
T Consensus 135 ~yg------v~~~~~g~~~P~~~liD~~G~I----~~~~~g~~~~~~~~~ell~~l~~l 183 (220)
T 1zye_A 135 DYG------VLLEGPGLALRGLFIIDPNGVI----KHLSVNDLPVGRSVEETLRLVKAF 183 (220)
T ss_dssp HTT------CEETTTTEECEEEEEECTTSBE----EEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HhC------CeecCCCcccceEEEECCCCEE----EEEEecCCCCCCCHHHHHHHHHHh
Confidence 555 88 999999994 4432 222234 35678888887664
No 253
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=97.52 E-value=0.00011 Score=67.71 Aligned_cols=96 Identities=14% Similarity=0.153 Sum_probs=68.7
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEe-CCCCC-----CcHHHHHHHHhhccC-ceEEEEEecccccHhHHhhcCCCCCCEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFS-KTGER-----ASPFVRQISRNYWAY-ASFAFVLWREEESSIWWNTFEVESAPAI 334 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~-~~~~~-----~~~~~~~~A~~~~~~-~~f~~v~~~~~~s~~l~~~f~V~~~Ptl 334 (658)
+++.+ +++++.. ..+.+|+|. +-+.| ..|.+..+|.+|.+. +.|+.|++.+ +++++.+|+|.+.||+
T Consensus 22 ~t~~~-F~~~v~~---~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe--~~~lA~~ygV~sIPTl 95 (140)
T 2qgv_A 22 VSESR-LDDWLTQ---APDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQ--SEAIGDRFGAFRFPAT 95 (140)
T ss_dssp CCHHH-HHHHHHT---CSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHH--HHHHHHHHTCCSSSEE
T ss_pred CCHHH-HHHHHhC---CCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCC--CHHHHHHcCCccCCEE
Confidence 45544 5666642 234455663 21212 578889999999888 8888886443 5789999999999999
Q ss_pred EEEeCCCCCeeeecCCCChHHHHHHHHhhc
Q 006171 335 VFLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (658)
Q Consensus 335 vlfk~~~~~p~~y~g~~~~~~L~~fi~~~~ 364 (658)
++||+|... ....|..+.+.|.++++.+.
T Consensus 96 ilFk~G~~v-~~~~G~~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 96 LVFTGGNYR-GVLNGIHPWAELINLMRGLV 124 (140)
T ss_dssp EEEETTEEE-EEEESCCCHHHHHHHHHHHH
T ss_pred EEEECCEEE-EEEecCCCHHHHHHHHHHHh
Confidence 999987432 23578888899999998754
No 254
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=97.52 E-value=5.8e-05 Score=73.39 Aligned_cols=98 Identities=10% Similarity=0.026 Sum_probs=66.0
Q ss_pred CCCcEEEEEe-ccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchhhhHHHhhC-------C------------CCc
Q 006171 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK-------P------------IGQ 210 (658)
Q Consensus 152 ~~~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~~~~Lc~k~-------~------------i~k 210 (658)
.+++++|.|| +.||++|....|.+.+++++++.. +.|..|+++........++++ + +.+
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 114 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMK 114 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHH
Confidence 3579999999 999999999999999999999764 488888887432222222221 0 112
Q ss_pred cccee------eeeEEEEcCCCCCCCCCcccccC----CCCHhHHHHHHHHh
Q 006171 211 IFFRR------GLPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (658)
Q Consensus 211 ~f~V~------~yPTl~~f~~g~~~~~~~~~Y~G----~rs~~~Lv~fv~k~ 252 (658)
.|.|. ++|+++++-+.+. ....+.| .++.++|.+.+...
T Consensus 115 ~ygv~~~~~g~~~P~~~lid~~G~---i~~~~~g~~~~~~~~~ell~~l~~l 163 (202)
T 1uul_A 115 SYGVLKEEDGVAYRGLFIIDPKQN---LRQITVNDLPVGRDVDEALRLVKAF 163 (202)
T ss_dssp HHTCEETTTTEECEEEEEECTTSB---EEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCE---EEEEEeCCCCCCCCHHHHHHHHHHh
Confidence 34488 9999888854332 1222333 35678888887654
No 255
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.51 E-value=6.3e-05 Score=60.34 Aligned_cols=71 Identities=8% Similarity=-0.034 Sum_probs=48.6
Q ss_pred EEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeeeEEEEcCCCCCCCCCcccc
Q 006171 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRF 236 (658)
Q Consensus 157 lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~~~~~~Y 236 (658)
++.|+++||++|+++.+.+++. .+.+..+|.++++......++++ +.++|++.. +|. .
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~di~~~~~~~~~~~~~~------~~~vP~l~~--~g~-------~- 60 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA------GLAYNTVDISLDDEARDYVMALG------YVQAPVVEV--DGE-------H- 60 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTT------CBCCCEEEE--TTE-------E-
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHcC------CCccCEEEE--CCe-------E-
Confidence 6789999999999988877654 14778888885543222223677 889999984 442 1
Q ss_pred cCCCCHhHHHHHH
Q 006171 237 EGELSVDAVTDWF 249 (658)
Q Consensus 237 ~G~rs~~~Lv~fv 249 (658)
-|..+.+.|.+++
T Consensus 61 ~~g~~~~~l~~~l 73 (75)
T 1r7h_A 61 WSGFRPERIKQLQ 73 (75)
T ss_dssp EESCCHHHHHHHH
T ss_pred EcCCCHHHHHHHH
Confidence 2335677777765
No 256
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=97.49 E-value=0.00056 Score=69.13 Aligned_cols=97 Identities=18% Similarity=0.133 Sum_probs=70.3
Q ss_pred eccchhhhhhhhhcCCCcEEEE-EE--eCCCCCCcHHHHHHHHhhc---cCceEEEEEecc---cccHhHHhhcCCC--C
Q 006171 262 YTKESMGKNFLAKTGPHKVKVI-FF--SKTGERASPFVRQISRNYW---AYASFAFVLWRE---EESSIWWNTFEVE--S 330 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl-~f--~~~~~~~~~~~~~~A~~~~---~~~~f~~v~~~~---~~s~~l~~~f~V~--~ 330 (658)
+++.+ ++..+. .+++.+| |+ .+-|. ..|.+..+|..|. ..+.|+.|...+ .+..+++.+|+|. +
T Consensus 21 Lt~~n-F~~vi~---~~~~vlV~Fy~~ApWCg-l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V~~~~ 95 (248)
T 2c0g_A 21 LDELS-FEKTVE---RFPYSVVKFDIASPYGE-KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVDDKN 95 (248)
T ss_dssp CCTTT-HHHHHT---TSSEEEEEEEESSCCSH-HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCCTTS
T ss_pred CCHHH-HHHHHh---cCCCEEEEEECCCCCCc-cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCCCcCC
Confidence 55555 455553 2334444 55 35443 6788888998884 367788886544 1147899999999 9
Q ss_pred CCEEEEEeCCC-CCeeee--cCCCChHHHHHHHHhhc
Q 006171 331 APAIVFLKDPG-VKPVVY--YGSFNNSRLSEVMEQNK 364 (658)
Q Consensus 331 ~Ptlvlfk~~~-~~p~~y--~g~~~~~~L~~fi~~~~ 364 (658)
+|||++|+ +. ..+..| .|..+.+.|.+||+.+.
T Consensus 96 ~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~ 131 (248)
T 2c0g_A 96 FPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANT 131 (248)
T ss_dssp CCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHS
T ss_pred CCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhh
Confidence 99999999 65 357778 89999999999999874
No 257
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.49 E-value=0.00022 Score=65.75 Aligned_cols=99 Identities=14% Similarity=0.138 Sum_probs=60.3
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEe-C-----CCCCCcHHHHHHHHhhccCce--EEEEEecccccHhHHhhcCCCCCCE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFS-K-----TGERASPFVRQISRNYWAYAS--FAFVLWREEESSIWWNTFEVESAPA 333 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~-~-----~~~~~~~~~~~~A~~~~~~~~--f~~v~~~~~~s~~l~~~f~V~~~Pt 333 (658)
+++++ +++++... ...+++|. . .|....|.+..++.+| +.+. |+.|... +..+++++|+|.+.||
T Consensus 22 l~~~~-f~~~i~~~---~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d--~~~~la~~~~V~~iPT 94 (142)
T 2es7_A 22 VEAST-VDDWIKRV---GDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLE--QSEAIGDRFNVRRFPA 94 (142)
T ss_dssp CCCC---------C---CSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHH--HHHHHHHTTTCCSSSE
T ss_pred ccccc-HHHHHHhC---CCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECC--CCHHHHHhcCCCcCCe
Confidence 45544 56666533 23455553 2 1233578888889888 7777 7777543 2467999999999999
Q ss_pred EEEEeCCCCCeeeecCCCChHHHHHHHHhhccCCC
Q 006171 334 IVFLKDPGVKPVVYYGSFNNSRLSEVMEQNKLQEL 368 (658)
Q Consensus 334 lvlfk~~~~~p~~y~g~~~~~~L~~fi~~~~~~~v 368 (658)
+++|++|. ....+.|..+.+.|.++++...-...
T Consensus 95 ~~~fk~G~-~v~~~~G~~~~~~l~~~i~~~l~~~~ 128 (142)
T 2es7_A 95 TLVFTDGK-LRGALSGIHPWAELLTLMRSIVDTPA 128 (142)
T ss_dssp EEEESCC-----CEESCCCHHHHHHHHHHHHC---
T ss_pred EEEEeCCE-EEEEEeCCCCHHHHHHHHHHHhcccc
Confidence 99997654 33347898899999999988654433
No 258
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=97.47 E-value=0.00023 Score=69.02 Aligned_cols=93 Identities=9% Similarity=-0.050 Sum_probs=63.3
Q ss_pred CCCcEEEEEeccCCCC-CCCChHHHHHHHHHhhc----ccceeeeecccc-------------------------hhhhH
Q 006171 152 DSKPWLIQVYSDGSYL-CGQFSGAWKTIAALLEG----IANTGMVELGDI-------------------------RLATH 201 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~-Ck~l~P~w~~~A~~l~g----~~~vg~Vdc~e~-------------------------~~~~~ 201 (658)
.++++||.||+.||++ |....|.+.++.+++.. .+.|..|+++.. .....
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 4689999999999998 99999999998888863 357777887621 01234
Q ss_pred HHhhCCCCccccee-eee---------------EEEE-cCCCCCCCCCcccccCCCCHhHHHHHHHHhhc
Q 006171 202 LAERKPIGQIFFRR-GLP---------------SLVA-FPPGCKSSDCMTRFEGELSVDAVTDWFATAIL 254 (658)
Q Consensus 202 Lc~k~~i~k~f~V~-~yP---------------Tl~~-f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~v~ 254 (658)
+++.|+ |. +.| ++++ -++|.. ...|.|..+.+.+.+.+.+.+.
T Consensus 120 ~~~~~g------v~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i----~~~~~g~~~~~~~~~~i~~~l~ 179 (200)
T 2b7k_A 120 ACKKYR------VYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQF----VDALGRNYDEKTGVDKIVEHVK 179 (200)
T ss_dssp HHHHTT------C--------------CTTTCCCEEEECTTSCE----EEEECTTCCTTHHHHHHHHHHH
T ss_pred HHHHcC------cEEeeccccCCCCCceeeecceEEEECCCCcE----EEEeCCCCCHHHHHHHHHHHHH
Confidence 666666 54 333 5444 456643 4557787888888888777644
No 259
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=97.43 E-value=0.00053 Score=61.99 Aligned_cols=107 Identities=10% Similarity=0.101 Sum_probs=70.5
Q ss_pred CCcceeeccchhhhhhhhhcCCCcEEEEEE-eCCCCC--CcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCC--
Q 006171 256 LPRIFYYTKESMGKNFLAKTGPHKVKVIFF-SKTGER--ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVES-- 330 (658)
Q Consensus 256 lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f-~~~~~~--~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~-- 330 (658)
+|.+..++..+ ++.+++. ..++++.| ...+++ ..|.++.+|.+|++.+.|+.+...+ ...++.+|||.+
T Consensus 5 ~plv~~~t~~~-f~~~~~~---~~pv~v~f~a~~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~--~~~~a~~~gi~~~~ 78 (133)
T 2djk_A 5 SPLIGEIGPET-YSDYMSA---GIPLAYIFAETAEERKELSDKLKPIAEAQRGVINFGTIDAKA--FGAHAGNLNLKTDK 78 (133)
T ss_dssp CCCSEECCHHH-HHHHHHT---TSCEEEEECSCSSSHHHHHHHHHHHHHSSTTTSEEEEECTTT--TGGGTTTTTCCSSS
T ss_pred cCceeccChHH-HHHHhcC---CCCEEEEEecChhhHHHHHHHHHHHHHHhCCeEEEEEEchHH--hHHHHHHcCCCccc
Confidence 45444456555 4454432 23445544 332222 3567778999999889999987442 467999999998
Q ss_pred CCEEEEEeCCCCCeeeec--CCCChHHHHHHHHhhccCCC
Q 006171 331 APAIVFLKDPGVKPVVYY--GSFNNSRLSEVMEQNKLQEL 368 (658)
Q Consensus 331 ~Ptlvlfk~~~~~p~~y~--g~~~~~~L~~fi~~~~~~~v 368 (658)
.||+++|+..+.+...+. |.++.+.|.+|++...-..+
T Consensus 79 iPtl~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gkl 118 (133)
T 2djk_A 79 FPAFAIQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGKI 118 (133)
T ss_dssp SSEEEEECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTCC
T ss_pred CCEEEEEecCcCcccCCCCccccCHHHHHHHHHHHHcCCc
Confidence 999999996222223344 88999999999987644333
No 260
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.40 E-value=0.00011 Score=70.87 Aligned_cols=43 Identities=9% Similarity=0.013 Sum_probs=35.2
Q ss_pred cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeec
Q 006171 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVEL 193 (658)
Q Consensus 151 ~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc 193 (658)
+..++.+|.|+++||++|+++.|.++++++.+.+.+.+..++.
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~ 65 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPI 65 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEEC
T ss_pred CCCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEec
Confidence 3578899999999999999999999999988865444555544
No 261
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.38 E-value=0.00059 Score=59.23 Aligned_cols=86 Identities=16% Similarity=0.150 Sum_probs=61.2
Q ss_pred CcEEEEEEe-C---CCCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCCh
Q 006171 278 HKVKVIFFS-K---TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (658)
Q Consensus 278 ~~v~vl~f~-~---~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~ 353 (658)
+++.++.|. + .|....+.+..++..+.+.+.|+.+.... ...++++|+|.+.||+++|+++ .....+.|..+.
T Consensus 17 ~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~ 93 (112)
T 2voc_A 17 EGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDE--NQETAGKYGVMSIPTLLVLKDG-EVVETSVGFKPK 93 (112)
T ss_dssp SSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTT--CCSHHHHTTCCSBSEEEEEETT-EEEEEEESCCCH
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCC--CHHHHHHcCCCcccEEEEEeCC-EEEEEEeCCCCH
Confidence 456666553 2 22334566777888887677788776433 4679999999999999999654 333347899999
Q ss_pred HHHHHHHHhhccC
Q 006171 354 SRLSEVMEQNKLQ 366 (658)
Q Consensus 354 ~~L~~fi~~~~~~ 366 (658)
+.|.+|++.+.-+
T Consensus 94 ~~l~~~l~~~~~~ 106 (112)
T 2voc_A 94 EALQELVNKHLLE 106 (112)
T ss_dssp HHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHHh
Confidence 9999999875443
No 262
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.34 E-value=9.7e-05 Score=71.04 Aligned_cols=35 Identities=14% Similarity=0.123 Sum_probs=30.9
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhccc
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIA 186 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~ 186 (658)
+.++.+|+|+++||+||+++.|.++++.+.+...+
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v 58 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADV 58 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTE
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCe
Confidence 57889999999999999999999999998876543
No 263
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=97.33 E-value=0.00012 Score=72.41 Aligned_cols=97 Identities=11% Similarity=0.045 Sum_probs=64.2
Q ss_pred CCCcEEEEEec-cCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchhhhHHHhhC-------------------CCCc
Q 006171 152 DSKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK-------------------PIGQ 210 (658)
Q Consensus 152 ~~~~~lV~FYa-pwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~~~~Lc~k~-------------------~i~k 210 (658)
.++++||.||+ .||++|....|.+.++.+++++. +.|..|+++........++++ .+.+
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 46799999996 99999999999999999999865 488888887432222222221 0112
Q ss_pred cccee------eeeEEEEcCCCCCCCCCcccccCC----CCHhHHHHHHHH
Q 006171 211 IFFRR------GLPSLVAFPPGCKSSDCMTRFEGE----LSVDAVTDWFAT 251 (658)
Q Consensus 211 ~f~V~------~yPTl~~f~~g~~~~~~~~~Y~G~----rs~~~Lv~fv~k 251 (658)
.|.|. .+|+.+++-..+. ....+.|. +..+++++.+..
T Consensus 148 ~ygv~~~~~g~~~P~~~lID~~G~---I~~~~~g~~~~~~~~~~il~~l~~ 195 (222)
T 3ztl_A 148 AYGVFDEEDGNAFRGLFIIDPNGI---LRQITINDKPVGRSVDETLRLLDA 195 (222)
T ss_dssp HTTCBCTTTSSBCEEEEEECTTSE---EEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HcCCeecCCCCccceEEEECCCCe---EEEEEecCCCCCCCHHHHHHHHHH
Confidence 34487 8999988854432 12333343 356677776644
No 264
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=97.32 E-value=0.0015 Score=65.17 Aligned_cols=56 Identities=13% Similarity=0.186 Sum_probs=41.3
Q ss_pred CCCcEEEEEe-ccCCCCCC-CChHHHHHHHHHhhcc-c-ceeeeecccchhhhHHHhhCC
Q 006171 152 DSKPWLIQVY-SDGSYLCG-QFSGAWKTIAALLEGI-A-NTGMVELGDIRLATHLAERKP 207 (658)
Q Consensus 152 ~~~~~lV~FY-apwC~~Ck-~l~P~w~~~A~~l~g~-~-~vg~Vdc~e~~~~~~Lc~k~~ 207 (658)
.+++++|.|| +.||++|. .-.|.+.+++++++.. + .|..|+.+........+++++
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 91 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEK 91 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTT
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcC
Confidence 3568999999 99999999 9999999999998653 4 577777764333333444443
No 265
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.27 E-value=0.00086 Score=60.36 Aligned_cols=98 Identities=18% Similarity=0.209 Sum_probs=67.3
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEeC----CCCCCcHHHHHHHHhhccC---ceEEEEEecccccHhHHhhcCCCCCCEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFSK----TGERASPFVRQISRNYWAY---ASFAFVLWREEESSIWWNTFEVESAPAI 334 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~~----~~~~~~~~~~~~A~~~~~~---~~f~~v~~~~~~s~~l~~~f~V~~~Ptl 334 (658)
++..+ ++..+. .+++.+|.|.. .|....+.+..++..+.+. +.|+.+... ....++++|+|..+||+
T Consensus 22 l~~~~-~~~~~~---~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~--~~~~~~~~~~v~~~Pt~ 95 (140)
T 2dj1_A 22 LNDGN-FDNFVA---DKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDAT--SASMLASKFDVSGYPTI 95 (140)
T ss_dssp CCTTT-HHHHHT---TCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTT--TCHHHHHHTTCCSSSEE
T ss_pred cChHh-HHHHHh---cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCc--ccHHHHHHCCCCccCeE
Confidence 34444 444443 34566666643 2234567777788777654 666666432 24789999999999999
Q ss_pred EEEeCCCCCeeeecCCCChHHHHHHHHhhccCC
Q 006171 335 VFLKDPGVKPVVYYGSFNNSRLSEVMEQNKLQE 367 (658)
Q Consensus 335 vlfk~~~~~p~~y~g~~~~~~L~~fi~~~~~~~ 367 (658)
++|+++. ...|.|..+.+.|.+|++...-+.
T Consensus 96 ~~~~~G~--~~~~~g~~~~~~l~~~l~~~~~~~ 126 (140)
T 2dj1_A 96 KILKKGQ--AVDYDGSRTQEEIVAKVREVSQPD 126 (140)
T ss_dssp EEEETTE--EEECCSCCCHHHHHHHHHHHHSSS
T ss_pred EEEECCc--EEEcCCCCCHHHHHHHHHHhcCCC
Confidence 9997653 566899999999999998865443
No 266
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=97.26 E-value=0.0038 Score=62.18 Aligned_cols=84 Identities=15% Similarity=0.088 Sum_probs=57.9
Q ss_pred cEEEEEEe-CC---CCCCcHHHHHHHHhhcc---CceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCC----eeee
Q 006171 279 KVKVIFFS-KT---GERASPFVRQISRNYWA---YASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK----PVVY 347 (658)
Q Consensus 279 ~v~vl~f~-~~---~~~~~~~~~~~A~~~~~---~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~----p~~y 347 (658)
++.+|.|. +- |....|.+..++..|.+ .+.|+.+.........++++|+|.++||+++|+++... ...+
T Consensus 31 ~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~g~~~~~ 110 (244)
T 3q6o_A 31 SAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGFPTVRFFXAFTXNGSGAVFPV 110 (244)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSSSEEEEECTTCCSSSCEECCC
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCccCEEEEEeCCCcCCCCeeEec
Confidence 56566553 32 22346777888888876 67788776543345789999999999999999975432 2234
Q ss_pred cCCCChHHHHHHHHhh
Q 006171 348 YGSFNNSRLSEVMEQN 363 (658)
Q Consensus 348 ~g~~~~~~L~~fi~~~ 363 (658)
.| .+.+.|.+++...
T Consensus 111 ~g-~~~~~l~~~i~~~ 125 (244)
T 3q6o_A 111 AG-ADVQTLRERLIDA 125 (244)
T ss_dssp TT-CCHHHHHHHHHHH
T ss_pred CC-CCHHHHHHHHHHH
Confidence 55 5888888877654
No 267
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=97.24 E-value=0.00096 Score=60.22 Aligned_cols=83 Identities=19% Similarity=0.291 Sum_probs=60.5
Q ss_pred CcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCCh
Q 006171 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (658)
Q Consensus 278 ~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~ 353 (658)
+++.+|.|. ..| ....+.+..++..|.+.+.|+.|.... ...++++|+|.++|++++|..++. ...+.|..+.
T Consensus 51 ~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~~g~-~~~~~G~~~~ 127 (141)
T 3hxs_A 51 DKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDK--EPELARDFGIQSIPTIWFVPMKGE-PQVNMGALSK 127 (141)
T ss_dssp SSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEECSSSC-CEEEESCCCH
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCC--CHHHHHHcCCCCcCEEEEEeCCCC-EEEEeCCCCH
Confidence 456666553 322 223566677888887777777776432 478999999999999999966553 4468999999
Q ss_pred HHHHHHHHhh
Q 006171 354 SRLSEVMEQN 363 (658)
Q Consensus 354 ~~L~~fi~~~ 363 (658)
+.|.+||+..
T Consensus 128 ~~l~~~l~~~ 137 (141)
T 3hxs_A 128 EQLKGYIDKV 137 (141)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 9999999864
No 268
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.22 E-value=5.4e-05 Score=65.34 Aligned_cols=59 Identities=8% Similarity=0.097 Sum_probs=42.1
Q ss_pred EEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccch----hhhHHHhhCCCCcccceeeeeEEEEcCCC
Q 006171 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR----LATHLAERKPIGQIFFRRGLPSLVAFPPG 226 (658)
Q Consensus 157 lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~----~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g 226 (658)
++.|+++||++|+++.|.+++++.... .+..+|.+.+. ....|++.++ +.++|++. .+|
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~~~~---~~~~vdi~~~~~~~~~~~~l~~~~g------~~~vP~i~--~~g 76 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPFKEG---LLEFVDITATSDTNEIQDYLQQLTG------ARTVPRVF--IGK 76 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCBCTT---SEEEEEGGGSTTHHHHHHHHHHHHS------CCCSCEEE--ETT
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCCCCC---ccEEEEccCCCCHHHHHHHHHHHhC------CCCcCeEE--ECC
Confidence 677999999999999988877643321 27778887541 1234777788 88999983 355
No 269
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=97.21 E-value=0.00032 Score=68.96 Aligned_cols=92 Identities=12% Similarity=0.031 Sum_probs=64.3
Q ss_pred CCCcEEEEEe-ccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchhh-------------------------hHHHh
Q 006171 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-------------------------THLAE 204 (658)
Q Consensus 152 ~~~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~~-------------------------~~Lc~ 204 (658)
.+++++|.|| ++||+.|+...|.+.+++++++.. +.|..|+++..... ..+++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 130 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISK 130 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHH
Confidence 4578999999 999999999999999999999753 47777777632111 23455
Q ss_pred hCCCCccccee-----eeeEEEEcCCCCCCCCCcccccC----CCCHhHHHHHHHHh
Q 006171 205 RKPIGQIFFRR-----GLPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (658)
Q Consensus 205 k~~i~k~f~V~-----~yPTl~~f~~g~~~~~~~~~Y~G----~rs~~~Lv~fv~k~ 252 (658)
.|+ |. ..|+.+++-+.+. ....+.| .++.+.|.+.+...
T Consensus 131 ~yg------v~~~~g~~~p~~~lID~~G~---i~~~~~~~~~~~~~~~ell~~l~~l 178 (213)
T 2i81_A 131 DYN------VLFDDSVSLRAFVLIDMNGI---VQHLLVNNLAIGRSVDEILRIIDAI 178 (213)
T ss_dssp HTT------CEETTTEECEEEEEECTTSB---EEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HhC------CccccCCcccEEEEECCCCE---EEEEEecCCCCCCCHHHHHHHHHHH
Confidence 555 88 8998888754433 1222333 35688888887654
No 270
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.20 E-value=0.0025 Score=55.10 Aligned_cols=97 Identities=19% Similarity=0.176 Sum_probs=65.5
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEe-C---CCCCCcHHHHHHHHhhcc---CceEEEEEecccccHhHHhhcCCCCCCEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFS-K---TGERASPFVRQISRNYWA---YASFAFVLWREEESSIWWNTFEVESAPAI 334 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~-~---~~~~~~~~~~~~A~~~~~---~~~f~~v~~~~~~s~~l~~~f~V~~~Ptl 334 (658)
++..+ ++..+.. +++.+|+|. + .|....+.+..++..+.+ .+.|+.+.... ...++++|+|.+.|++
T Consensus 12 l~~~~-~~~~~~~---~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~v~~~Pt~ 85 (120)
T 1mek_A 12 LRKSN-FAEALAA---HKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE--ESDLAQQYGVRGYPTI 85 (120)
T ss_dssp CCTTT-HHHHHHH---CSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT--CCSSHHHHTCCSSSEE
T ss_pred echhh-HHHHHcc---CCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC--CHHHHHHCCCCcccEE
Confidence 44444 4455542 346566553 2 344456777778877753 45666665332 3579999999999999
Q ss_pred EEEeCCCC-CeeeecCCCChHHHHHHHHhhc
Q 006171 335 VFLKDPGV-KPVVYYGSFNNSRLSEVMEQNK 364 (658)
Q Consensus 335 vlfk~~~~-~p~~y~g~~~~~~L~~fi~~~~ 364 (658)
++|+++.. .+..|.|..+.+.|.+|++...
T Consensus 86 ~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~ 116 (120)
T 1mek_A 86 KFFRNGDTASPKEYTAGREADDIVNWLKKRT 116 (120)
T ss_dssp EEEESSCSSSCEECCCCSSHHHHHHHHHTTS
T ss_pred EEEeCCCcCCcccccCccCHHHHHHHHHhcc
Confidence 99987653 2356889989999999998753
No 271
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.20 E-value=0.00076 Score=57.46 Aligned_cols=95 Identities=13% Similarity=0.160 Sum_probs=65.5
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEeC-CC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFSK-TG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~~-~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlf 337 (658)
++.++ ++..+.. +++.++.|.. .| ....+.+..++..+.+.+.|+.+... ....++++|+|.+.|++++|
T Consensus 9 l~~~~-~~~~~~~---~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~i~~~Pt~~~~ 82 (109)
T 3tco_A 9 LTEEN-FDEVIRN---NKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVD--ENQKIADKYSVLNIPTTLIF 82 (109)
T ss_dssp CCTTT-HHHHHHH---SSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETT--TCHHHHHHTTCCSSSEEEEE
T ss_pred ecHHH-HHHHHhc---CCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccc--cCHHHHHhcCcccCCEEEEE
Confidence 44444 5555543 3566666643 22 12346667788888777878877643 35789999999999999999
Q ss_pred eCCCCCeeeecCCCChHHHHHHHHhh
Q 006171 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 338 k~~~~~p~~y~g~~~~~~L~~fi~~~ 363 (658)
+++. ....+.|..+.+.|.++++..
T Consensus 83 ~~g~-~~~~~~g~~~~~~l~~~l~~~ 107 (109)
T 3tco_A 83 VNGQ-LVDSLVGAVDEDTLESTVNKY 107 (109)
T ss_dssp ETTE-EEEEEESCCCHHHHHHHHHHH
T ss_pred cCCc-EEEeeeccCCHHHHHHHHHHH
Confidence 6653 333478988999999998764
No 272
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.20 E-value=0.0002 Score=72.03 Aligned_cols=89 Identities=9% Similarity=-0.003 Sum_probs=58.9
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeee---------------------------------------
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVE--------------------------------------- 192 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vd--------------------------------------- 192 (658)
+.++.++.|+.+||++|+++.|..+++.+. +.++|..++
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~ 173 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS--GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNV 173 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT--TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC--CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCc
Confidence 456789999999999999999998887654 322222111
Q ss_pred -------cc-cchhhhHHHhhCCCCcccceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 193 -------LG-DIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 193 -------c~-e~~~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|. .-.....+++++| |+|.||+++...++. +....|..+.+.|.+++.+.
T Consensus 174 ~~~~~~~~~~~v~~~~~l~~~~g------v~gtPt~vi~~~~G~----~~~~~G~~~~~~L~~~l~~~ 231 (241)
T 1v58_A 174 PANVSTEQMKVLSDNEKLMDDLG------ANVTPAIYYMSKENT----LQQAVGLPDQKTLNIIMGNK 231 (241)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHT------CCSSCEEEEEETTTE----EEEEESSCCHHHHHHHTTC-
T ss_pred cccCCHHHHHHHHHHHHHHHHcC------CCCCCEEEEECCCCC----EEEecCCCCHHHHHHHHHHH
Confidence 11 0011233677777 899999999763222 23467988999988887543
No 273
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=97.20 E-value=0.00022 Score=66.25 Aligned_cols=96 Identities=11% Similarity=0.062 Sum_probs=61.5
Q ss_pred CCcEEEEEec-cCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchhhhHHHhhCCC------------Ccccceee--
Q 006171 153 SKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPI------------GQIFFRRG-- 216 (658)
Q Consensus 153 ~~~~lV~FYa-pwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~~~~Lc~k~~i------------~k~f~V~~-- 216 (658)
+++++|.||+ .||++|....|.+.++.+++++. +.|..|+++........++++++ .+.|.+..
T Consensus 35 gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~ 114 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEK 114 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEEE
T ss_pred CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCcccc
Confidence 5689999998 99999999999999999999865 47778888733222333333221 12233665
Q ss_pred ----------eeEEEEcCCCCCCCCCcccccCC---CCHhHHHHHHHH
Q 006171 217 ----------LPSLVAFPPGCKSSDCMTRFEGE---LSVDAVTDWFAT 251 (658)
Q Consensus 217 ----------yPTl~~f~~g~~~~~~~~~Y~G~---rs~~~Lv~fv~k 251 (658)
.|+.+++-+.+. ....|.|. ...+.+++.+.+
T Consensus 115 ~~~~~~~~~~~p~~~lid~~G~---i~~~~~~~~~~~~~~~il~~l~~ 159 (163)
T 3gkn_A 115 NMYGKQVLGIERSTFLLSPEGQ---VVQAWRKVKVAGHADAVLAALKA 159 (163)
T ss_dssp EETTEEEEEECCEEEEECTTSC---EEEEECSCCSTTHHHHHHHHHHH
T ss_pred ccccccccCcceEEEEECCCCe---EEEEEcCCCcccCHHHHHHHHHH
Confidence 899988854433 12233332 234556655544
No 274
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.19 E-value=0.00087 Score=56.87 Aligned_cols=83 Identities=19% Similarity=0.240 Sum_probs=59.3
Q ss_pred CCcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCC
Q 006171 277 PHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFN 352 (658)
Q Consensus 277 ~~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~ 352 (658)
.+++.++.|. +.| ....+.+..++..|.+.+.|+.+.... ...++++|+|.+.||+++|+++. ....+.|..+
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~G~-~~~~~~g~~~ 94 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDE--NPSTAAKYEVMSIPTLIVFKDGQ-PVDKVVGFQP 94 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSBSEEEEEETTE-EEEEEESCCC
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCc--CHHHHHhCCCcccCEEEEEeCCe-EEEEEeCCCC
Confidence 3456666664 322 223466677888887777787776433 57899999999999999998543 3334789889
Q ss_pred hHHHHHHHHh
Q 006171 353 NSRLSEVMEQ 362 (658)
Q Consensus 353 ~~~L~~fi~~ 362 (658)
.+.|.+++++
T Consensus 95 ~~~l~~~l~~ 104 (106)
T 3die_A 95 KENLAEVLDK 104 (106)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 9999999876
No 275
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.16 E-value=0.00098 Score=58.98 Aligned_cols=100 Identities=15% Similarity=0.120 Sum_probs=66.0
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEeCCC---CCCcHHHHHHHHhhcc-CceEEEEEecccccHhHHhhcCCCCCCEEEEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFSKTG---ERASPFVRQISRNYWA-YASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~~~~---~~~~~~~~~~A~~~~~-~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlf 337 (658)
++.++ +++.+.+ .+.|.|+.+.| ....+.+..++..+.+ .+.|+.+... +...++++|+|..+||+++|
T Consensus 12 l~~~~-f~~~~~~----~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~ 84 (126)
T 1x5e_A 12 ITDEN-WRELLEG----DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVT--EQPGLSGRFIINALPTIYHC 84 (126)
T ss_dssp CCTTT-HHHHTSS----EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETT--TCHHHHHHTTCCSSSEEEEE
T ss_pred ecHHH-HHHHhCC----CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECc--CCHHHHHHcCCcccCEEEEE
Confidence 44444 4444432 25444554432 2234566667777764 5777777543 24679999999999999999
Q ss_pred eCCCCCeeeecCCCChHHHHHHHHhhccCCCcc
Q 006171 338 KDPGVKPVVYYGSFNNSRLSEVMEQNKLQELPQ 370 (658)
Q Consensus 338 k~~~~~p~~y~g~~~~~~L~~fi~~~~~~~vP~ 370 (658)
+++. ...+.|..+.+.|.+|++......+..
T Consensus 85 ~~G~--~~~~~G~~~~~~l~~~l~~~~~~~~~~ 115 (126)
T 1x5e_A 85 KDGE--FRRYQGPRTKKDFINFISDKEWKSIEP 115 (126)
T ss_dssp ETTE--EEECCSCCCHHHHHHHHHTCGGGGSCE
T ss_pred eCCe--EEEeecCCCHHHHHHHHHHHhhccCCC
Confidence 7653 456889999999999999865544443
No 276
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=97.12 E-value=0.0003 Score=65.62 Aligned_cols=63 Identities=16% Similarity=0.082 Sum_probs=47.8
Q ss_pred CCCcEEEEEeccC-CCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeeeEEE
Q 006171 152 DSKPWLIQVYSDG-SYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLV 221 (658)
Q Consensus 152 ~~~~~lV~FYapw-C~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl~ 221 (658)
.+++++|.||+.| |++|+...|.++++.+++ ..+.+..|+++........+++++ +..||.+.
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~------~~~~~~~~ 106 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANG------IDKVETLS 106 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSS------CTTEEEEE
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcC------CCCceEee
Confidence 4679999999999 999999999999999999 556888888874433334555555 44566443
No 277
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.12 E-value=0.0025 Score=64.96 Aligned_cols=99 Identities=9% Similarity=0.177 Sum_probs=70.7
Q ss_pred eeccchhhhhhhhhcCCCcEEEEEE-e---CCCCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEE
Q 006171 261 YYTKESMGKNFLAKTGPHKVKVIFF-S---KTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (658)
Q Consensus 261 ~it~~~~~~~Fl~~~~~~~v~vl~f-~---~~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvl 336 (658)
.++..+ +++.+... .+++.+|.| . ..|....|.+..++..|.+.+.|+.|.... ...++++|+|.++||+++
T Consensus 11 ~~~~~~-f~~~~~~~-~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~ 86 (287)
T 3qou_A 11 NINESN-LQQVLEQS-MTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDA--EQMIAAQFGLRAIPTVYL 86 (287)
T ss_dssp ECCTTT-HHHHHTTT-TTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTT--CHHHHHTTTCCSSSEEEE
T ss_pred ECCHHH-HHHHHHhc-CCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCcc--CHHHHHHcCCCCCCeEEE
Confidence 356555 55566432 245555555 3 345557788888999888778888876433 478999999999999999
Q ss_pred EeCCCCCeeeecCCCChHHHHHHHHhhc
Q 006171 337 LKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (658)
Q Consensus 337 fk~~~~~p~~y~g~~~~~~L~~fi~~~~ 364 (658)
|+++. ....+.|..+.+.+.+|+....
T Consensus 87 ~~~G~-~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 87 FQNGQ-PVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp EETTE-EEEEEESCCCHHHHHHHHHHHS
T ss_pred EECCE-EEEEeeCCCCHHHHHHHHHHHc
Confidence 98652 2234789889999999998753
No 278
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.11 E-value=0.0012 Score=63.34 Aligned_cols=33 Identities=12% Similarity=0.175 Sum_probs=29.5
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhc
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG 184 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g 184 (658)
+.++.+++|+++||++|.++.|...++.+.+.+
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~ 53 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS 53 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC
Confidence 467899999999999999999999999887754
No 279
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=97.11 E-value=0.0011 Score=59.06 Aligned_cols=71 Identities=13% Similarity=0.258 Sum_probs=48.1
Q ss_pred CCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 289 GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 289 ~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
+....|.+..++..|.+.+.|+.+.... ...++++|+|.++||+++|++|. ....+.|..+.+.|.+|++.
T Consensus 50 C~~~~p~~~~l~~~~~~~~~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~~ 120 (123)
T 1oaz_A 50 CKMIAPILDEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRGIPTLLLFKNGE-VAATKVGALSKGQLKEFLDA 120 (123)
T ss_dssp CCTTHHHHTTC-------CEEEEEETTS--CTTTGGGGTCCBSSEEEEEESSS-EEEEEESCCCHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHhcCCeEEEEEECCC--CHHHHHHcCCCccCEEEEEECCE-EEEEEeCCCCHHHHHHHHHH
Confidence 3344677777777776667777776433 46799999999999999996543 33347898899999999976
No 280
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=97.10 E-value=0.00076 Score=57.87 Aligned_cols=96 Identities=17% Similarity=0.341 Sum_probs=64.6
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlf 337 (658)
++.++ ++..+.. .+++.+|.|. +.| ....+.+..++..|.+.+.|+.+.... ...++++|+|.+.||+++|
T Consensus 9 l~~~~-~~~~~~~--~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~ 83 (111)
T 3gnj_A 9 LDTNT-FEQLIYD--EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEE--EKTLFQRFSLKGVPQILYF 83 (111)
T ss_dssp CCHHH-HHHHHTT--SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTT--CHHHHHHTTCCSSCEEEEE
T ss_pred cCHHH-HHHHHHh--cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCc--ChhHHHhcCCCcCCEEEEE
Confidence 34444 4444422 2345566554 322 223556677888887678888886443 5789999999999999999
Q ss_pred eCCCCCeeeecCCCChHHHHHHHHhh
Q 006171 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 338 k~~~~~p~~y~g~~~~~~L~~fi~~~ 363 (658)
+++. ....+.|..+.+.|.+|++..
T Consensus 84 ~~g~-~~~~~~g~~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 84 KDGE-YKGKMAGDVEDDEVEQMIADV 108 (111)
T ss_dssp ETTE-EEEEEESSCCHHHHHHHHHHH
T ss_pred ECCE-EEEEEeccCCHHHHHHHHHHH
Confidence 7653 333578988999999998764
No 281
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=97.09 E-value=0.0076 Score=67.28 Aligned_cols=86 Identities=13% Similarity=0.088 Sum_probs=60.3
Q ss_pred CcEEEEEEe-CC---CCCCcHHHHHHHHhhcc---CceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCC---Ceeee
Q 006171 278 HKVKVIFFS-KT---GERASPFVRQISRNYWA---YASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGV---KPVVY 347 (658)
Q Consensus 278 ~~v~vl~f~-~~---~~~~~~~~~~~A~~~~~---~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~---~p~~y 347 (658)
+++.+|.|. +- |....|.+..++..|.+ .+.|+.|.....+...++++|+|.++||+++|+++.. ....+
T Consensus 30 ~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~PTl~~f~~g~~~G~~~~~~ 109 (519)
T 3t58_A 30 SSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGFPTVRFFQAFTKNGSGATLP 109 (519)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSBSEEEEECTTCCSCCCEEEC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcccCEEEEEcCcccCCCceeEe
Confidence 356666553 31 22346777888888876 5777777654334578999999999999999996432 22345
Q ss_pred cCCCChHHHHHHHHhh
Q 006171 348 YGSFNNSRLSEVMEQN 363 (658)
Q Consensus 348 ~g~~~~~~L~~fi~~~ 363 (658)
.|..+.+.|.+++.+.
T Consensus 110 ~g~~~~~~L~~~l~~~ 125 (519)
T 3t58_A 110 GAGANVQTLRMRLIDA 125 (519)
T ss_dssp CSSCCHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHH
Confidence 6778888888887664
No 282
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.08 E-value=0.00076 Score=66.81 Aligned_cols=98 Identities=8% Similarity=0.009 Sum_probs=65.8
Q ss_pred CCCcEEEEEe-ccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchhhhHHHhhC-------CC------------Cc
Q 006171 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK-------PI------------GQ 210 (658)
Q Consensus 152 ~~~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~~~~Lc~k~-------~i------------~k 210 (658)
.+++++|.|| +.||+.|....|.+.++.++++.. +.|..|+++........++++ ++ .+
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 134 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISK 134 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHH
Confidence 4578999999 999999999999999999999653 477777776432333344443 11 12
Q ss_pred ccce-----eeeeEEEEcCCCCCCCCCcccccC----CCCHhHHHHHHHHh
Q 006171 211 IFFR-----RGLPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (658)
Q Consensus 211 ~f~V-----~~yPTl~~f~~g~~~~~~~~~Y~G----~rs~~~Lv~fv~k~ 252 (658)
.|.| ...|+.+++-+.+. ....+.| .++.++|++.+.+.
T Consensus 135 ~ygv~~~~g~~~P~~~lID~~G~---I~~~~~g~~~~~~~~~ell~~l~~L 182 (221)
T 2c0d_A 135 NYNVLYDNSFALRGLFIIDKNGC---VRHQTVNDLPIGRNVQEVLRTIDSI 182 (221)
T ss_dssp HTTCEETTTEECEEEEEECTTSB---EEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HcCCcccCCCccceEEEECCCCe---EEEEEecCCCCCCCHHHHHHHHHHH
Confidence 4557 36899988864433 1222333 35678888887654
No 283
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.04 E-value=0.0019 Score=55.54 Aligned_cols=84 Identities=13% Similarity=0.194 Sum_probs=58.7
Q ss_pred CCcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCC
Q 006171 277 PHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFN 352 (658)
Q Consensus 277 ~~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~ 352 (658)
.+++.+++|. +.| ....+.+..++..+.+.+.|+.+.... ...++++|+|...|++++|+++. ....+.|..+
T Consensus 24 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~G~-~~~~~~g~~~ 100 (115)
T 1thx_A 24 AEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDP--NPTTVKKYKVEGVPALRLVKGEQ-ILDSTEGVIS 100 (115)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTT--CHHHHHHTTCCSSSEEEEEETTE-EEEEEESCCC
T ss_pred CCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCC--CHHHHHHcCCCceeEEEEEcCCE-EEEEecCCCC
Confidence 3455566554 322 123456666788877677788776433 46799999999999999996543 3334788889
Q ss_pred hHHHHHHHHhh
Q 006171 353 NSRLSEVMEQN 363 (658)
Q Consensus 353 ~~~L~~fi~~~ 363 (658)
.+.|.+|+++.
T Consensus 101 ~~~l~~~l~~~ 111 (115)
T 1thx_A 101 KDKLLSFLDTH 111 (115)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998764
No 284
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=97.04 E-value=0.0011 Score=57.99 Aligned_cols=90 Identities=23% Similarity=0.259 Sum_probs=60.1
Q ss_pred hhhhhhhcCCCcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCC
Q 006171 268 GKNFLAKTGPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (658)
Q Consensus 268 ~~~Fl~~~~~~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~ 343 (658)
+++.+... .+++.+|.|. +-| ....+.+..++..|.+ +.|+.|... +...++++|+|.+.||+++|+++. .
T Consensus 22 f~~~l~~~-~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d--~~~~l~~~~~v~~~Pt~~~~~~G~-~ 96 (116)
T 3qfa_C 22 FQEALDAA-GDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVD--DCQDVASECEVKSMPTFQFFKKGQ-K 96 (116)
T ss_dssp HHHHHHHH-TTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETT--TTHHHHHHTTCCSSSEEEEESSSS-E
T ss_pred HHHHHHhc-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECC--CCHHHHHHcCCccccEEEEEeCCe-E
Confidence 56666533 3445566553 322 2234566667777755 677777543 347899999999999999996543 3
Q ss_pred eeeecCCCChHHHHHHHHhh
Q 006171 344 PVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 344 p~~y~g~~~~~~L~~fi~~~ 363 (658)
...+.|. +.+.|.+++++.
T Consensus 97 ~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 97 VGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp EEEEESC-CHHHHHHHHHHH
T ss_pred EEEEcCC-CHHHHHHHHHHh
Confidence 3346788 899999998763
No 285
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.04 E-value=0.0011 Score=56.36 Aligned_cols=84 Identities=17% Similarity=0.198 Sum_probs=58.0
Q ss_pred CCcEEEEEEeC-CC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCC
Q 006171 277 PHKVKVIFFSK-TG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFN 352 (658)
Q Consensus 277 ~~~v~vl~f~~-~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~ 352 (658)
.+++.+++|.. .| ....+.+..++..+.+.+.|+.+...+ ...++++|+|...|++++|+++. ....+.|..+
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~G~-~~~~~~G~~~ 95 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDD--NPETPNAYQVRSIPTLMLVRDGK-VIDKKVGALP 95 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTT--CCHHHHHTTCCSSSEEEEEETTE-EEEEEESCCC
T ss_pred CCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCC--CHHHHHhcCCCccCEEEEEeCCE-EEEEecCCCC
Confidence 34566666643 22 112455566777776667777775433 46799999999999999996543 3334789889
Q ss_pred hHHHHHHHHhh
Q 006171 353 NSRLSEVMEQN 363 (658)
Q Consensus 353 ~~~L~~fi~~~ 363 (658)
.+.|.+|++++
T Consensus 96 ~~~l~~~l~~~ 106 (107)
T 2i4a_A 96 KSQLKAWVESA 106 (107)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 99999999764
No 286
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.03 E-value=0.00098 Score=58.57 Aligned_cols=83 Identities=13% Similarity=0.146 Sum_probs=57.2
Q ss_pred CcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCCh
Q 006171 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (658)
Q Consensus 278 ~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~ 353 (658)
+++.+|+|. +.| ....+.+..++..+.+.+.|+.+.... ...++++|+|...|++++|+++. ....+.|..+.
T Consensus 31 ~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~G~-~~~~~~G~~~~ 107 (119)
T 1w4v_A 31 ETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDD--HTDLAIEYEVSAVPTVLAMKNGD-VVDKFVGIKDE 107 (119)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTT--THHHHHHTTCCSSSEEEEEETTE-EEEEEESCCCH
T ss_pred CCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCC--CHHHHHHcCCCcccEEEEEeCCc-EEEEEcCCCCH
Confidence 455566554 322 123455566777776677777775432 46799999999999999997543 33347888899
Q ss_pred HHHHHHHHhh
Q 006171 354 SRLSEVMEQN 363 (658)
Q Consensus 354 ~~L~~fi~~~ 363 (658)
+.|.+|+++.
T Consensus 108 ~~l~~~l~~~ 117 (119)
T 1w4v_A 108 DQLEAFLKKL 117 (119)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998763
No 287
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=97.02 E-value=0.0021 Score=57.85 Aligned_cols=87 Identities=16% Similarity=0.276 Sum_probs=60.8
Q ss_pred CcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCCh
Q 006171 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (658)
Q Consensus 278 ~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~ 353 (658)
+++.+|.|. +.| ....+.+..++..|.+.+.|+.+.... ...++++|+|...||+++|..++. .+.+.|..+.
T Consensus 38 ~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~~G~-~~~~~G~~~~ 114 (136)
T 2l5l_A 38 DKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEK--EQELAGAFGIRSIPSILFIPMEGK-PEMAQGAMPK 114 (136)
T ss_dssp SSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSCEEEEECSSSC-CEEEESCCCH
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCC--CHHHHHHcCCCCCCEEEEECCCCc-EEEEeCCCCH
Confidence 455566554 322 123456666788887677777776432 467999999999999999943333 3468899999
Q ss_pred HHHHHHHHhhccCC
Q 006171 354 SRLSEVMEQNKLQE 367 (658)
Q Consensus 354 ~~L~~fi~~~~~~~ 367 (658)
+.|.+|+++..-..
T Consensus 115 ~~l~~~l~~~~~~~ 128 (136)
T 2l5l_A 115 ASFKKAIDEFLLKK 128 (136)
T ss_dssp HHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHhhcc
Confidence 99999998865443
No 288
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.02 E-value=0.0014 Score=58.24 Aligned_cols=83 Identities=14% Similarity=0.103 Sum_probs=59.0
Q ss_pred CcEEEEEEeC-C---CCCCcHHHHHHHHhhc----cCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecC
Q 006171 278 HKVKVIFFSK-T---GERASPFVRQISRNYW----AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYG 349 (658)
Q Consensus 278 ~~v~vl~f~~-~---~~~~~~~~~~~A~~~~----~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g 349 (658)
+++.+|.|.. . |....+.+..++..+. ..+.|+.+.... ...++++|+|..+||+++|+++ .....|.|
T Consensus 25 ~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~g-~~~~~~~G 101 (133)
T 1x5d_A 25 EDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV--NQVLASRYGIRGFPTIKIFQKG-ESPVDYDG 101 (133)
T ss_dssp SSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT--CCHHHHHHTCCSSSEEEEEETT-EEEEEECS
T ss_pred CCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC--CHHHHHhCCCCeeCeEEEEeCC-CceEEecC
Confidence 4566666643 2 2234566677777776 566677665332 4679999999999999999974 34455889
Q ss_pred CCChHHHHHHHHhh
Q 006171 350 SFNNSRLSEVMEQN 363 (658)
Q Consensus 350 ~~~~~~L~~fi~~~ 363 (658)
..+.+.|.+|+...
T Consensus 102 ~~~~~~l~~~l~~~ 115 (133)
T 1x5d_A 102 GRTRSDIVSRALDL 115 (133)
T ss_dssp CCSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 98999999998864
No 289
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.00 E-value=0.0011 Score=64.61 Aligned_cols=78 Identities=15% Similarity=0.186 Sum_probs=59.1
Q ss_pred CcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHhhccCCCccc
Q 006171 292 ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNKLQELPQL 371 (658)
Q Consensus 292 ~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~~~~~~vP~l 371 (658)
..|.+..++..+.+.+.|+.|.... ...++++|+|.++||+++|+++. ....+.|..+.+.|.+|++...-+.+.+|
T Consensus 132 ~~p~~~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G~-~~~~~~G~~~~~~l~~~i~~~l~~~~~~i 208 (210)
T 3apq_A 132 LAPTWREFAKEVDGLLRIGAVNCGD--DRMLCRMKGVNSYPSLFIFRSGM-AAVKYNGDRSKESLVAFAMQHVRSTVTEL 208 (210)
T ss_dssp HHHHHHHHHHHTBTTBEEEEEETTT--CHHHHHHTTCCSSSEEEEECTTS-CCEECCSCCCHHHHHHHHHHHHHCCSSCC
T ss_pred HHHHHHHHHHHhcCceEEEEEECCc--cHHHHHHcCCCcCCeEEEEECCC-ceeEecCCCCHHHHHHHHHHhCcccceec
Confidence 3566777888887777788776432 47899999999999999996654 44568899999999999998765555554
Q ss_pred c
Q 006171 372 R 372 (658)
Q Consensus 372 t 372 (658)
+
T Consensus 209 ~ 209 (210)
T 3apq_A 209 S 209 (210)
T ss_dssp -
T ss_pred C
Confidence 4
No 290
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=96.99 E-value=0.00084 Score=59.84 Aligned_cols=84 Identities=17% Similarity=0.175 Sum_probs=59.6
Q ss_pred CCcEEEEEEeC-CC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCC
Q 006171 277 PHKVKVIFFSK-TG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFN 352 (658)
Q Consensus 277 ~~~v~vl~f~~-~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~ 352 (658)
.+++.+|.|.. .| ....+.+..++..|.+.+.|+.|.... ...++++|+|.+.||+++|+++ .....+.|..+
T Consensus 41 ~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~ 117 (128)
T 3ul3_B 41 KNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDK--NESLARKFSVKSLPTIILLKNK-TMLARKDHFVS 117 (128)
T ss_dssp CCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGG--CHHHHHHTTCCSSSEEEEEETT-EEEEEESSCCC
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCC--CHHHHHHcCCCCcCEEEEEECC-EEEEEecCCCC
Confidence 45676776643 22 223566667888777667777775432 4789999999999999999754 33344789899
Q ss_pred hHHHHHHHHhh
Q 006171 353 NSRLSEVMEQN 363 (658)
Q Consensus 353 ~~~L~~fi~~~ 363 (658)
.+.|.+|++++
T Consensus 118 ~~~l~~~l~~~ 128 (128)
T 3ul3_B 118 SNDLIALIKKH 128 (128)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHHhC
Confidence 99999998753
No 291
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=96.99 E-value=0.0013 Score=56.15 Aligned_cols=84 Identities=13% Similarity=0.225 Sum_probs=58.2
Q ss_pred CCcEEEEEEeC-CC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCC
Q 006171 277 PHKVKVIFFSK-TG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFN 352 (658)
Q Consensus 277 ~~~v~vl~f~~-~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~ 352 (658)
.+++.++.|.. .| ....+.+..++..|.+.+.|+.+.... ...++++|+|.+.||+++|+++. ....+.|..+
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~G~-~~~~~~G~~~ 95 (108)
T 2trx_A 19 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRGIPTLLLFKNGE-VAATKVGALS 95 (108)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTT--CTTHHHHTTCCSSSEEEEEETTE-EEEEEESCCC
T ss_pred cCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCC--CHHHHHHcCCcccCEEEEEeCCE-EEEEEecCCC
Confidence 34566666643 22 123455666777776667777765432 46799999999999999997543 3334789889
Q ss_pred hHHHHHHHHhh
Q 006171 353 NSRLSEVMEQN 363 (658)
Q Consensus 353 ~~~L~~fi~~~ 363 (658)
.+.|.+|+++.
T Consensus 96 ~~~l~~~l~~~ 106 (108)
T 2trx_A 96 KGQLKEFLDAN 106 (108)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998763
No 292
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=96.97 E-value=0.003 Score=62.24 Aligned_cols=42 Identities=10% Similarity=-0.145 Sum_probs=36.7
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhccc-ceeeeecc
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIA-NTGMVELG 194 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~-~vg~Vdc~ 194 (658)
.++++||.|+|.||+.|+ -.|.++++.+++++.. .|-.|+|+
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d 97 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCN 97 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEcc
Confidence 468999999999999999 7899999999997654 88888885
No 293
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=96.97 E-value=0.0008 Score=63.64 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=35.0
Q ss_pred CCCcEEEEEeccC-CCCCCCChHHHHHHHHHhhcccceeeeecc
Q 006171 152 DSKPWLIQVYSDG-SYLCGQFSGAWKTIAALLEGIANTGMVELG 194 (658)
Q Consensus 152 ~~~~~lV~FYapw-C~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~ 194 (658)
.+++++|.||+.| |+.|+...|.++++.++ ..+.|..|+.+
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D 84 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA--SGATVLCVSKD 84 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--cCCEEEEEECC
Confidence 3679999999999 99999999999999988 33577777776
No 294
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=96.97 E-value=0.00039 Score=64.43 Aligned_cols=93 Identities=8% Similarity=0.009 Sum_probs=57.5
Q ss_pred CcEEEEEe-ccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCC------------Ccccceeeee--
Q 006171 154 KPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPI------------GQIFFRRGLP-- 218 (658)
Q Consensus 154 ~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i------------~k~f~V~~yP-- 218 (658)
++++|.|| +.||+.|....|.+.++.++++....|..|+++........++++++ .+.|.+...|
T Consensus 36 ~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p~~ 115 (159)
T 2a4v_A 36 RVVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTPLS 115 (159)
T ss_dssp SEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTCEEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSSSSS
T ss_pred CeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCcccccC
Confidence 36888888 99999999999999999999975447777777633222223333221 1234477888
Q ss_pred -----EEEEcCCCCCCCCCcccccCCCC---HhHHHHHHHH
Q 006171 219 -----SLVAFPPGCKSSDCMTRFEGELS---VDAVTDWFAT 251 (658)
Q Consensus 219 -----Tl~~f~~g~~~~~~~~~Y~G~rs---~~~Lv~fv~k 251 (658)
++++ ++|.. ...+.|... .+.+++-+.+
T Consensus 116 g~~~~~~li-~~G~i----~~~~~g~~~~~~~~~~~~~l~~ 151 (159)
T 2a4v_A 116 GSIRSHFIF-VDGKL----KFKRVKISPEVSVNDAKKEVLE 151 (159)
T ss_dssp CBCCEEEEE-ETTEE----EEEEESCCHHHHHHHHHHHHHH
T ss_pred CccceEEEE-cCCEE----EEEEccCCccccHHHHHHHHHH
Confidence 5666 76643 344555443 2344444443
No 295
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=96.96 E-value=0.0016 Score=55.71 Aligned_cols=94 Identities=14% Similarity=0.141 Sum_probs=60.2
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEe-CCC---CCCcHHHHHHHHhhcc---CceEEEEEecccccHhHHhhcCCCCCCEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFS-KTG---ERASPFVRQISRNYWA---YASFAFVLWREEESSIWWNTFEVESAPAI 334 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~---~~~f~~v~~~~~~s~~l~~~f~V~~~Ptl 334 (658)
++..+ +++.+. +++.++.|. +.| ....+.+..++..+.. .+.|+.+.. .....++++|+|.++||+
T Consensus 10 l~~~~-~~~~~~----~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~--~~~~~l~~~~~v~~~Pt~ 82 (111)
T 3uvt_A 10 LTENN-FDDTIA----EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDC--TAERNICSKYSVRGYPTL 82 (111)
T ss_dssp CCTTT-HHHHHH----SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEET--TTCHHHHHHTTCCSSSEE
T ss_pred cChhh-HHHHhc----CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEec--cccHhHHHhcCCCcccEE
Confidence 45544 555554 335566554 322 1234555556665532 344555543 234789999999999999
Q ss_pred EEEeCCCCCeeeecCCCChHHHHHHHHhh
Q 006171 335 VFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 335 vlfk~~~~~p~~y~g~~~~~~L~~fi~~~ 363 (658)
++|+++. ....+.|..+.+.|.+|++++
T Consensus 83 ~~~~~g~-~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 83 LLFRGGK-KVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEEETTE-EEEEECSCCSHHHHHHHHHHH
T ss_pred EEEeCCc-EEEeccCCcCHHHHHHHHHhc
Confidence 9997653 334578999999999999875
No 296
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=96.92 E-value=0.003 Score=53.43 Aligned_cols=90 Identities=23% Similarity=0.252 Sum_probs=60.2
Q ss_pred hhhhhhhcCCCcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCC
Q 006171 268 GKNFLAKTGPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (658)
Q Consensus 268 ~~~Fl~~~~~~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~ 343 (658)
+++.+... .+++.++.|. +.| ....+.+..++..|.+ +.|..+... +...++++|+|.+.||+++|+++. .
T Consensus 11 ~~~~l~~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~~~g~-~ 85 (105)
T 3m9j_A 11 FQEALDAA-GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVD--DCQDVASESEVKSMPTFQFFKKGQ-K 85 (105)
T ss_dssp HHHHHHHT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETT--TCHHHHHHTTCCBSSEEEEEETTE-E
T ss_pred HHHHHHhc-CCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhh--hhHHHHHHcCCCcCcEEEEEECCe-E
Confidence 55666533 3456666554 322 1234566667777754 677776543 357899999999999999997653 3
Q ss_pred eeeecCCCChHHHHHHHHhh
Q 006171 344 PVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 344 p~~y~g~~~~~~L~~fi~~~ 363 (658)
...+.|. +.+.|.+++++.
T Consensus 86 ~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 86 VGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp EEEEESS-CHHHHHHHHHHH
T ss_pred EEEEeCC-CHHHHHHHHHHh
Confidence 3346788 889999998763
No 297
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=96.91 E-value=0.00076 Score=59.20 Aligned_cols=83 Identities=7% Similarity=0.005 Sum_probs=57.4
Q ss_pred CcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCC---
Q 006171 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS--- 350 (658)
Q Consensus 278 ~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~--- 350 (658)
+++.++.|. +.| ....+.+..++..+.+.+.|+.+.... ...++++|+|.+.||+++|++++. ...+.|.
T Consensus 21 ~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~~~~-~~~~~g~~~~ 97 (122)
T 3aps_A 21 KTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQA--YPQTCQKAGIKAYPSVKLYQYERA-KKSIWEEQIN 97 (122)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEEEEGG-GTEEEEEEEC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcC--CHHHHHHcCCCccceEEEEeCCCc-cceeeccccC
Confidence 455566554 322 223466666788887677777776433 467999999999999999977654 2335553
Q ss_pred -CChHHHHHHHHhh
Q 006171 351 -FNNSRLSEVMEQN 363 (658)
Q Consensus 351 -~~~~~L~~fi~~~ 363 (658)
.+.+.|.+|++..
T Consensus 98 ~~~~~~l~~~l~~~ 111 (122)
T 3aps_A 98 SRDAKTIAALIYGK 111 (122)
T ss_dssp CSCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHH
Confidence 7889999998764
No 298
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=96.90 E-value=0.00056 Score=57.10 Aligned_cols=54 Identities=11% Similarity=0.169 Sum_probs=39.8
Q ss_pred EEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhC-CCCcccceeeeeEEEE
Q 006171 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERK-PIGQIFFRRGLPSLVA 222 (658)
Q Consensus 156 ~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~-~i~k~f~V~~yPTl~~ 222 (658)
-++.|+++||++|+++.+.+++.. +.+..+|.+ ......+.+.+ + +.++|++.+
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~~------i~~~~vdv~-~~~~~~l~~~~~~------~~~vP~l~~ 61 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKKG------VKYTDIDAS-TSLRQEMVQRANG------RNTFPQIFI 61 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHHT------CCEEEECSC-HHHHHHHHHHHHS------SCCSCEEEE
T ss_pred eEEEEECCCChhHHHHHHHHHHcC------CCcEEEECC-HHHHHHHHHHhCC------CCCcCEEEE
Confidence 477899999999999888777642 356777776 22334577777 7 779999853
No 299
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=96.89 E-value=0.0017 Score=59.34 Aligned_cols=95 Identities=15% Similarity=0.148 Sum_probs=65.1
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlf 337 (658)
++.++ ++..+ ..+++.+|.|. +.+ ....+.+..++..|.+.+.|+.|... +...++++|+|.++||+++|
T Consensus 43 l~~~~-~~~~~---~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~ 116 (148)
T 3p2a_A 43 ATAET-LDKLL---QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTE--AEPALSTRFRIRSIPTIMLY 116 (148)
T ss_dssp CCTTT-HHHHT---TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETT--TCHHHHHHTTCCSSSEEEEE
T ss_pred cCHHH-HHHHH---hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECc--CCHHHHHHCCCCccCEEEEE
Confidence 34433 45554 23456566554 322 22356677788888777777777543 35789999999999999999
Q ss_pred eCCCCCeeeecCCCChHHHHHHHHhh
Q 006171 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 338 k~~~~~p~~y~g~~~~~~L~~fi~~~ 363 (658)
+++. ....+.|..+.+.|.+|++..
T Consensus 117 ~~G~-~~~~~~G~~~~~~l~~~l~~~ 141 (148)
T 3p2a_A 117 RNGK-MIDMLNGAVPKAPFDNWLDEQ 141 (148)
T ss_dssp ETTE-EEEEESSCCCHHHHHHHHHHH
T ss_pred ECCe-EEEEEeCCCCHHHHHHHHHHH
Confidence 8543 333478999999999999874
No 300
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=96.89 E-value=0.0018 Score=54.96 Aligned_cols=95 Identities=18% Similarity=0.201 Sum_probs=62.9
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEeC-CC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFSK-TG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~~-~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlf 337 (658)
++.++ ++..+.. +++.+++|.. .| ....+.+..++..+.+.+.|..+.... ...++++|+|.+.|++++|
T Consensus 6 l~~~~-~~~~~~~---~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~ 79 (109)
T 2yzu_A 6 VTDQN-FDETLGQ---HPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDE--NPKTAMRYRVMSIPTVILF 79 (109)
T ss_dssp CCTTT-HHHHHHH---CSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTT--CHHHHHHTTCCSSSEEEEE
T ss_pred ccHhH-HHHHhcC---CCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCC--CHhHHHhCCCCcCCEEEEE
Confidence 34444 3444432 3466666643 22 122455666777777667777775432 4679999999999999999
Q ss_pred eCCCCCeeeecCCCChHHHHHHHHhh
Q 006171 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 338 k~~~~~p~~y~g~~~~~~L~~fi~~~ 363 (658)
+++. ....+.|..+.+.|.+|++..
T Consensus 80 ~~g~-~~~~~~g~~~~~~l~~~l~~~ 104 (109)
T 2yzu_A 80 KDGQ-PVEVLVGAQPKRNYQAKIEKH 104 (109)
T ss_dssp ETTE-EEEEEESCCCHHHHHHHHHTT
T ss_pred eCCc-EeeeEeCCCCHHHHHHHHHHH
Confidence 6543 223478988899999999864
No 301
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=96.88 E-value=0.001 Score=60.42 Aligned_cols=83 Identities=16% Similarity=0.217 Sum_probs=59.9
Q ss_pred CcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCCh
Q 006171 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (658)
Q Consensus 278 ~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~ 353 (658)
+++.+|.|. +.| ....+.+..++..+.+.+.|+.|.... ...++++|+|.++||+++|+++. ....+.|..+.
T Consensus 24 ~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G~-~~~~~~G~~~~ 100 (140)
T 3hz4_A 24 KKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIAT--NPWTAEKYGVQGTPTFKFFCHGR-PVWEQVGQIYP 100 (140)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTT--CHHHHHHHTCCEESEEEEEETTE-EEEEEESSCCH
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCc--CHhHHHHCCCCcCCEEEEEeCCc-EEEEEcCCCCH
Confidence 456566554 322 223566677888887778888886433 47899999999999999997653 33357898899
Q ss_pred HHHHHHHHhh
Q 006171 354 SRLSEVMEQN 363 (658)
Q Consensus 354 ~~L~~fi~~~ 363 (658)
+.|.+|++..
T Consensus 101 ~~l~~~l~~~ 110 (140)
T 3hz4_A 101 SILKNAVRDM 110 (140)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 302
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=96.87 E-value=0.0015 Score=58.44 Aligned_cols=84 Identities=13% Similarity=0.235 Sum_probs=59.2
Q ss_pred CCcEEEEEEeC-C---CCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCC
Q 006171 277 PHKVKVIFFSK-T---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFN 352 (658)
Q Consensus 277 ~~~v~vl~f~~-~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~ 352 (658)
.+++.+|+|.. . |....+.+..++..|.+.+.|+.+...+ ...++++|+|...||+++|+++. ....+.|..+
T Consensus 39 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G~-~~~~~~G~~~ 115 (128)
T 2o8v_B 39 ADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRGIPTLLLFKNGE-VAATKVGALS 115 (128)
T ss_dssp CSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTT--CCTTSGGGTCCSSSEEEEEETTE-EEEEEESCCC
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCC--CHHHHHHcCCCccCEEEEEeCCE-EEEEEcCCCC
Confidence 34566666643 2 2234567777888887667777775433 46799999999999999996543 3334789889
Q ss_pred hHHHHHHHHhh
Q 006171 353 NSRLSEVMEQN 363 (658)
Q Consensus 353 ~~~L~~fi~~~ 363 (658)
.+.|.+|+++.
T Consensus 116 ~~~l~~~l~~~ 126 (128)
T 2o8v_B 116 KGQLKEFLDAN 126 (128)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998763
No 303
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=96.86 E-value=0.0011 Score=56.70 Aligned_cols=83 Identities=11% Similarity=0.160 Sum_probs=49.4
Q ss_pred CCcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCC
Q 006171 277 PHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFN 352 (658)
Q Consensus 277 ~~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~ 352 (658)
.+++.++.|. +.| ....|.+..++..| +.+.|+.+.... ...++++|+|.+.||+++|+++. ....+.|..+
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~-~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G~-~~~~~~g~~~ 92 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENY-NYVEKIEILLQD--MQEIAGRYAVFTGPTVLLFYNGK-EILRESRFIS 92 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTC-TTEEEEEEEECC--C---------CCCCEEEEEETTE-EEEEEESSCC
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHc-CCceEEEEECCC--CHHHHHhcCCCCCCEEEEEeCCe-EEEEEeCCcC
Confidence 3456666664 322 22356666677776 356677765433 46799999999999999998543 3334688889
Q ss_pred hHHHHHHHHhh
Q 006171 353 NSRLSEVMEQN 363 (658)
Q Consensus 353 ~~~L~~fi~~~ 363 (658)
.+.|.+++++.
T Consensus 93 ~~~l~~~l~~~ 103 (105)
T 4euy_A 93 LENLERTIQLF 103 (105)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHh
Confidence 99999999763
No 304
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=96.85 E-value=0.0012 Score=64.87 Aligned_cols=98 Identities=13% Similarity=0.025 Sum_probs=64.6
Q ss_pred CCCcEEEEEe-ccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchhhhHHHhhC-------CC------------Cc
Q 006171 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK-------PI------------GQ 210 (658)
Q Consensus 152 ~~~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~~~~Lc~k~-------~i------------~k 210 (658)
.+++++|.|| +.||++|..-.|.+.++.++++.. +.|..|+++........++++ ++ .+
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 126 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 126 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHH
Confidence 3578999999 999999999999999999999754 477777776432222333332 11 12
Q ss_pred cccee------eeeEEEEcCCCCCCCCCcccccC----CCCHhHHHHHHHHh
Q 006171 211 IFFRR------GLPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (658)
Q Consensus 211 ~f~V~------~yPTl~~f~~g~~~~~~~~~Y~G----~rs~~~Lv~fv~k~ 252 (658)
.|.|. ..|+.+++-+.+. ....+.| .++.+++++.+...
T Consensus 127 ~ygv~~~~~g~~~p~~~lID~~G~---I~~~~~g~~~~~~~~~ell~~l~~l 175 (211)
T 2pn8_A 127 DYGVYLEDSGHTLRGLFIIDDKGI---LRQITLNDLPVGRSVDETLRLVQAF 175 (211)
T ss_dssp HTTCEETTTTEECEEEEEECTTSB---EEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCcccCCCcccceEEEECCCCE---EEEEEecCCCCCCCHHHHHHHHHHh
Confidence 34463 6899988865443 1222333 25778888877654
No 305
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=96.83 E-value=0.0037 Score=52.88 Aligned_cols=91 Identities=25% Similarity=0.243 Sum_probs=59.5
Q ss_pred hhhhhhhcCCCcEEEEEEeC-CC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCC
Q 006171 268 GKNFLAKTGPHKVKVIFFSK-TG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (658)
Q Consensus 268 ~~~Fl~~~~~~~v~vl~f~~-~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~ 343 (658)
++..+... .+++.++.|.. .+ ....+.+..++..+.+.+.|..+... +...++++|+|.+.||+++|+++. .
T Consensus 11 ~~~~l~~~-~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~G~-~ 86 (106)
T 1xwb_A 11 LDGQLTKA-SGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVD--ECEDIAMEYNISSMPTFVFLKNGV-K 86 (106)
T ss_dssp HHHHHHHH-TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETT--TCHHHHHHTTCCSSSEEEEEETTE-E
T ss_pred HHHHHHhc-CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEecc--chHHHHHHcCCCcccEEEEEcCCc-E
Confidence 45555432 34566666643 22 11245566677777666677776543 346799999999999999998653 3
Q ss_pred eeeecCCCChHHHHHHHHhh
Q 006171 344 PVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 344 p~~y~g~~~~~~L~~fi~~~ 363 (658)
...+.| .+.+.|.+++++.
T Consensus 87 ~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 87 VEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp EEEEES-CCHHHHHHHHHHT
T ss_pred EEEEcC-CCHHHHHHHHHHh
Confidence 334678 6888899998763
No 306
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=96.82 E-value=0.0024 Score=53.51 Aligned_cols=89 Identities=19% Similarity=0.252 Sum_probs=59.3
Q ss_pred hhhhhhhcCCCcEEEEEEeC-CC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCC
Q 006171 268 GKNFLAKTGPHKVKVIFFSK-TG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (658)
Q Consensus 268 ~~~Fl~~~~~~~v~vl~f~~-~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~ 343 (658)
+++.+. .+++.+++|.. .| ....+.+..++..+.+ +.|+.+.... ...++++|++.+.|++++|+++. .
T Consensus 9 ~~~~~~---~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~g~-~ 81 (104)
T 2e0q_A 9 FDSFLA---SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDE--NPDIAARYGVMSLPTVIFFKDGE-P 81 (104)
T ss_dssp HHHHHH---HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT--CHHHHHHTTCCSSCEEEEEETTE-E
T ss_pred HHHHHh---cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCC--CHHHHHhCCccccCEEEEEECCe-E
Confidence 455553 23466666643 22 1124555667777765 7777775432 46799999999999999997543 3
Q ss_pred eeeecCCCChHHHHHHHHhh
Q 006171 344 PVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 344 p~~y~g~~~~~~L~~fi~~~ 363 (658)
...+.|..+.+.|.+|++..
T Consensus 82 ~~~~~g~~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 82 VDEIIGAVPREEIEIRIKNL 101 (104)
T ss_dssp EEEEESCCCHHHHHHHHHHH
T ss_pred hhhccCCCCHHHHHHHHHHH
Confidence 33478988989999998764
No 307
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=96.82 E-value=0.0017 Score=56.62 Aligned_cols=82 Identities=16% Similarity=0.139 Sum_probs=57.5
Q ss_pred CcEEEEEEeC-CC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCCh
Q 006171 278 HKVKVIFFSK-TG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (658)
Q Consensus 278 ~~v~vl~f~~-~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~ 353 (658)
+++.+++|.. .| ....+.+..++..+.+.+.|+.+.... ...++++|+|.+.||+++|+++. ....+.|..+.
T Consensus 30 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~i~~~Pt~~~~~~g~-~~~~~~G~~~~ 106 (121)
T 2i1u_A 30 NKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDT--NPETARNFQVVSIPTLILFKDGQ-PVKRIVGAKGK 106 (121)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEETTE-EEEEEESCCCH
T ss_pred CCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCC--CHHHHHhcCCCcCCEEEEEECCE-EEEEecCCCCH
Confidence 4565666543 22 223456666777776667777776432 47799999999999999998542 33347898888
Q ss_pred HHHHHHHHh
Q 006171 354 SRLSEVMEQ 362 (658)
Q Consensus 354 ~~L~~fi~~ 362 (658)
+.|.+|++.
T Consensus 107 ~~l~~~l~~ 115 (121)
T 2i1u_A 107 AALLRELSD 115 (121)
T ss_dssp HHHHHHTCS
T ss_pred HHHHHHHHH
Confidence 899999875
No 308
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=96.80 E-value=0.0027 Score=54.03 Aligned_cols=82 Identities=17% Similarity=0.163 Sum_probs=56.9
Q ss_pred CcEEEEEEeC-CC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCCh
Q 006171 278 HKVKVIFFSK-TG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (658)
Q Consensus 278 ~~v~vl~f~~-~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~ 353 (658)
+++.++.|.. .| ....+.+..++..+.+.+.|+.+... ....++++|+|.+.||+++|+++. ....+.|..+.
T Consensus 19 ~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~G~-~~~~~~G~~~~ 95 (107)
T 1dby_A 19 SVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTD--ESPNVASEYGIRSIPTIMVFKGGK-KCETIIGAVPK 95 (107)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETT--TCHHHHHHHTCCSSCEEEEESSSS-EEEEEESCCCH
T ss_pred CCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECC--CCHHHHHHCCCCcCCEEEEEeCCE-EEEEEeCCCCH
Confidence 4566665543 22 12245566677777766777777543 246799999999999999997543 33347888888
Q ss_pred HHHHHHHHh
Q 006171 354 SRLSEVMEQ 362 (658)
Q Consensus 354 ~~L~~fi~~ 362 (658)
+.|.+++++
T Consensus 96 ~~l~~~l~~ 104 (107)
T 1dby_A 96 ATIVQTVEK 104 (107)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 899999876
No 309
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=96.80 E-value=0.0013 Score=61.14 Aligned_cols=56 Identities=9% Similarity=0.090 Sum_probs=36.3
Q ss_pred CCCcEEEEEe-ccCCCCCCCChHHHHHHHHHhhccc-ceeeeecccchhhhHHHhhCC
Q 006171 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIA-NTGMVELGDIRLATHLAERKP 207 (658)
Q Consensus 152 ~~~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~~-~vg~Vdc~e~~~~~~Lc~k~~ 207 (658)
.+++++|.|| +.||+.|..-.|.+.++.++++... .+..|+.+......+.+++++
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~ 86 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNK 86 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTT
T ss_pred CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcC
Confidence 4678999999 9999999999999998888887654 677777774433344555544
No 310
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=96.76 E-value=0.00028 Score=62.21 Aligned_cols=59 Identities=7% Similarity=0.095 Sum_probs=41.7
Q ss_pred cEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccch----hhhHHHhhCCCCcccceeeeeEEEE
Q 006171 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR----LATHLAERKPIGQIFFRRGLPSLVA 222 (658)
Q Consensus 155 ~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~----~~~~Lc~k~~i~k~f~V~~yPTl~~ 222 (658)
..++.|++|||++|+++.+.+++.+... ..+..||+++++ ....|++.++ +.++|++++
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~~~~~~~---~~~~~vdi~~~~~~~~~~~~l~~~~g------~~~vP~v~i 81 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILNKFSFKR---GAYEIVDIKEFKPENELRDYFEQITG------GKTVPRIFF 81 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHTTSCBCT---TSEEEEEGGGSSSHHHHHHHHHHHHS------CCSSCEEEE
T ss_pred CCEEEEEeCCChhHHHHHHHHHHcCCCc---CceEEEEccCCCChHHHHHHHHHHhC------CCCcCEEEE
Confidence 3578899999999998888776543110 128889988552 2235788888 889999844
No 311
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=96.76 E-value=0.0014 Score=55.58 Aligned_cols=82 Identities=12% Similarity=0.095 Sum_probs=56.5
Q ss_pred CcEEEEEEeC-CC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCCh
Q 006171 278 HKVKVIFFSK-TG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (658)
Q Consensus 278 ~~v~vl~f~~-~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~ 353 (658)
+++.+++|.. .| ....+.+..++..+.+.+.|..+...+ ...++++|+|.+.||+++|+++. ....+.|..+.
T Consensus 17 ~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~G~-~~~~~~G~~~~ 93 (105)
T 1nsw_A 17 DGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDE--NPETTSQFGIMSIPTLILFKGGR-PVKQLIGYQPK 93 (105)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEETTE-EEEEEESCCCH
T ss_pred CCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcC--CHHHHHHcCCccccEEEEEeCCe-EEEEEecCCCH
Confidence 3455665543 22 123455666777776667777775432 46799999999999999996542 33347888888
Q ss_pred HHHHHHHHh
Q 006171 354 SRLSEVMEQ 362 (658)
Q Consensus 354 ~~L~~fi~~ 362 (658)
+.|.++++.
T Consensus 94 ~~l~~~l~~ 102 (105)
T 1nsw_A 94 EQLEAQLAD 102 (105)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHHHH
Confidence 889998865
No 312
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=96.76 E-value=0.0018 Score=60.07 Aligned_cols=83 Identities=10% Similarity=0.050 Sum_probs=59.7
Q ss_pred CcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCCh
Q 006171 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (658)
Q Consensus 278 ~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~ 353 (658)
+++.+|.|. +.+ ....+.+..++..|.+.+.|+.|...+ ...++++|+|.+.||+++|+++. ....+.|..+.
T Consensus 64 ~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~--~~~l~~~~~i~~~Pt~~~~~~G~-~~~~~~G~~~~ 140 (155)
T 2ppt_A 64 DLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQA--HPAVAGRHRIQGIPAFILFHKGR-ELARAAGARPA 140 (155)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTT--STHHHHHTTCCSSSEEEEEETTE-EEEEEESCCCH
T ss_pred CCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCc--cHHHHHHcCCCcCCEEEEEeCCe-EEEEecCCCCH
Confidence 445566554 322 223566777888887778888886433 46799999999999999997543 33347898899
Q ss_pred HHHHHHHHhh
Q 006171 354 SRLSEVMEQN 363 (658)
Q Consensus 354 ~~L~~fi~~~ 363 (658)
+.|.+|+++.
T Consensus 141 ~~l~~~l~~~ 150 (155)
T 2ppt_A 141 SELVGFVRGK 150 (155)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999874
No 313
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=96.75 E-value=0.002 Score=55.41 Aligned_cols=83 Identities=13% Similarity=0.081 Sum_probs=57.6
Q ss_pred CcEEEEEEeC-CC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCCh
Q 006171 278 HKVKVIFFSK-TG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (658)
Q Consensus 278 ~~v~vl~f~~-~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~ 353 (658)
+++.++.|.. .| ....+.+..++..|.+.+.|..+.... ...++++|+|.+.||+++|+++. ....+.|..+.
T Consensus 23 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~G~-~~~~~~G~~~~ 99 (112)
T 1t00_A 23 DKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDE--NPGTAAKYGVMSIPTLNVYQGGE-VAKTIVGAKPK 99 (112)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEETTE-EEEEEESCCCH
T ss_pred CCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCC--CHHHHHhCCCCcccEEEEEeCCE-EEEEEeCCCCH
Confidence 4565665543 22 123455666777776667777775432 47899999999999999997653 22347898888
Q ss_pred HHHHHHHHhh
Q 006171 354 SRLSEVMEQN 363 (658)
Q Consensus 354 ~~L~~fi~~~ 363 (658)
+.|.++++..
T Consensus 100 ~~l~~~l~~~ 109 (112)
T 1t00_A 100 AAIVRDLEDF 109 (112)
T ss_dssp HHHHHHTHHH
T ss_pred HHHHHHHHHH
Confidence 8999988763
No 314
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=96.75 E-value=0.0025 Score=56.24 Aligned_cols=90 Identities=16% Similarity=0.199 Sum_probs=60.6
Q ss_pred CCcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCC
Q 006171 277 PHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFN 352 (658)
Q Consensus 277 ~~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~ 352 (658)
.+++.+|.|. +.| ....+.+..++..|.+.+.|..+.........++++|+|...||+++|..++.....+.|..+
T Consensus 25 ~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G~~~ 104 (126)
T 2l57_A 25 EGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFYVHQGLMR 104 (126)
T ss_dssp SSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEEEEESCCC
T ss_pred CCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEEEecCCCC
Confidence 3456566554 322 123455566777776667777775212224679999999999999999855544445789889
Q ss_pred hHHHHHHHHhhccC
Q 006171 353 NSRLSEVMEQNKLQ 366 (658)
Q Consensus 353 ~~~L~~fi~~~~~~ 366 (658)
.+.|.++++...-+
T Consensus 105 ~~~l~~~l~~~~~~ 118 (126)
T 2l57_A 105 KNNIETILNSLGVK 118 (126)
T ss_dssp HHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999875433
No 315
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.73 E-value=0.00063 Score=61.54 Aligned_cols=62 Identities=15% Similarity=0.223 Sum_probs=42.3
Q ss_pred CCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccc---hh-hhHHHhhCCCCcccceeeeeEEE
Q 006171 146 FPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI---RL-ATHLAERKPIGQIFFRRGLPSLV 221 (658)
Q Consensus 146 F~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~---~~-~~~Lc~k~~i~k~f~V~~yPTl~ 221 (658)
|+..+..+. ++.|+++||++|+++.+.++++. +.+..||++.+ +. ...|++.++ +.++|+|+
T Consensus 20 ~~~~i~~~~--vvvf~~~~Cp~C~~~~~~L~~~~------i~~~~vdid~~~~~~~~~~~l~~~~g------~~~vP~l~ 85 (130)
T 2cq9_A 20 IQETISDNC--VVIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTG------ERTVPRIF 85 (130)
T ss_dssp HHHHHHHSS--EEEEECSSCSHHHHHHHHHHHHT------CCCEEEETTTSTTHHHHHHHHHHHHS------SCCSSEEE
T ss_pred HHHHHcCCc--EEEEEcCCChHHHHHHHHHHHcC------CCcEEEECcCCcCcHHHHHHHHHHhC------CCCcCEEE
Confidence 344443443 34499999999999999887753 35667777743 21 123777788 88999984
No 316
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=96.72 E-value=0.0028 Score=55.79 Aligned_cols=95 Identities=23% Similarity=0.178 Sum_probs=60.2
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEe-CCCC---CCcHHHHHHHHhhccC-ceEEEEEecccccHhHHhhcCCCCCCEEEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFS-KTGE---RASPFVRQISRNYWAY-ASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~-~~~~---~~~~~~~~~A~~~~~~-~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvl 336 (658)
+++.+.+++.+. .+++.+++|. +.|. ...+.+..++..+.+. +.|..+... ....++++|+|...||+++
T Consensus 20 i~~~~~f~~~l~---~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d--~~~~~~~~~~v~~~Pt~~~ 94 (121)
T 2j23_A 20 ISSYDQFKQVTG---GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVD--EQSQIAQEVGIRAMPTFVF 94 (121)
T ss_dssp CCSHHHHHHHHS---SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETT--TCHHHHHHHTCCSSSEEEE
T ss_pred cCCHHHHHHHHc---CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECc--CCHHHHHHcCCCcccEEEE
Confidence 555333555552 3455566553 3221 1245555566666544 667776533 2467999999999999999
Q ss_pred EeCCCCCeeeecCCCChHHHHHHHHhh
Q 006171 337 LKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 337 fk~~~~~p~~y~g~~~~~~L~~fi~~~ 363 (658)
|+++. ....+.|. +.+.|.+|++..
T Consensus 95 ~~~G~-~~~~~~G~-~~~~l~~~l~~~ 119 (121)
T 2j23_A 95 FKNGQ-KIDTVVGA-DPSKLQAAITQH 119 (121)
T ss_dssp EETTE-EEEEEESS-CHHHHHHHHHHH
T ss_pred EECCe-EEeeEcCC-CHHHHHHHHHHh
Confidence 97543 33346787 888999998763
No 317
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=96.72 E-value=0.0019 Score=61.82 Aligned_cols=98 Identities=9% Similarity=-0.040 Sum_probs=65.2
Q ss_pred CCCcEEEEEec-cCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchhhhHHHhhC----CC------------Ccccc
Q 006171 152 DSKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK----PI------------GQIFF 213 (658)
Q Consensus 152 ~~~~~lV~FYa-pwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~~~~Lc~k~----~i------------~k~f~ 213 (658)
.+++++|.||+ .||+.|..-.|.+.++.++++.. +.|..|+++........++++ ++ .+.|.
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~yg 108 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFD 108 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhC
Confidence 36789999995 99999999999999999998754 477777776433333445444 22 12344
Q ss_pred ee------eeeEEEEcCCCCCCCCCcccccCC----CCHhHHHHHHHHh
Q 006171 214 RR------GLPSLVAFPPGCKSSDCMTRFEGE----LSVDAVTDWFATA 252 (658)
Q Consensus 214 V~------~yPTl~~f~~g~~~~~~~~~Y~G~----rs~~~Lv~fv~k~ 252 (658)
+. ..|+.+++-+.+. ....+.|. ++.+.|.+.+.+.
T Consensus 109 v~~~~~g~~~p~~~lID~~G~---i~~~~~~~~~~~~~~~~l~~~l~~l 154 (186)
T 1n8j_A 109 NMREDEGLADRATFVVDPQGI---IQAIEVTAEGIGRDASDLLRKIKAA 154 (186)
T ss_dssp CEETTTTEECEEEEEECTTSB---EEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CccCCCCceeeEEEEECCCCe---EEEEEecCCCCCCCHHHHHHHHHHH
Confidence 65 3699888864433 12334443 3678888877654
No 318
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=96.71 E-value=0.0061 Score=59.58 Aligned_cols=42 Identities=10% Similarity=-0.175 Sum_probs=35.9
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhccc-ceeeeecc
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIA-NTGMVELG 194 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~-~vg~Vdc~ 194 (658)
.++++||.|+|.||+.| .-.|.+.++.+++++.. .|..|+|+
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECc
Confidence 46799999999999999 56899999999997664 78888875
No 319
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=96.69 E-value=0.004 Score=53.12 Aligned_cols=96 Identities=19% Similarity=0.225 Sum_probs=60.1
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlf 337 (658)
+++.+.+++.+... .+++.++.|. +.| ....|.+..++..| ..+.|..+.... ...++++|+|.+.||+++|
T Consensus 6 i~~~~~~~~~~~~~-~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 1gh2_A 6 VGSDPDFQPELSGA-GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVHQ--CQGTAATNNISATPTFQFF 81 (107)
T ss_dssp ECSGGGHHHHHHHT-TTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETTT--SHHHHHHTTCCSSSEEEEE
T ss_pred ecCHHHHHHHHHhC-CCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECcc--CHHHHHhcCCCcccEEEEE
Confidence 33333356666432 3455566554 322 22345666677777 457777776433 4779999999999999999
Q ss_pred eCCCCCeeeecCCCChHHHHHHHHhh
Q 006171 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 338 k~~~~~p~~y~g~~~~~~L~~fi~~~ 363 (658)
+++. ....+.|. +...|.+|++..
T Consensus 82 ~~G~-~~~~~~G~-~~~~l~~~l~~~ 105 (107)
T 1gh2_A 82 RNKV-RIDQYQGA-DAVGLEEKIKQH 105 (107)
T ss_dssp ETTE-EEEEEESS-CHHHHHHHHHHH
T ss_pred ECCe-EEEEEeCC-CHHHHHHHHHHh
Confidence 8653 22346774 455699988763
No 320
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=96.69 E-value=0.0029 Score=54.65 Aligned_cols=82 Identities=20% Similarity=0.235 Sum_probs=55.1
Q ss_pred CCcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCC
Q 006171 277 PHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFN 352 (658)
Q Consensus 277 ~~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~ 352 (658)
.+++.+|.|. +.| ....+.+..++..|. .+.|..+... ....++++|+|.+.||+++|+++ .....+.|. +
T Consensus 23 ~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~-~~~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~-~ 97 (109)
T 3f3q_A 23 QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP-QADFYKLDVD--ELGDVAQKNEVSAMPTLLLFKNG-KEVAKVVGA-N 97 (109)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETT--TCHHHHHHTTCCSSSEEEEEETT-EEEEEEESS-C
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECC--CCHHHHHHcCCCccCEEEEEECC-EEEEEEeCC-C
Confidence 3556666664 322 223456666777764 3667776543 34789999999999999999854 333346777 6
Q ss_pred hHHHHHHHHhh
Q 006171 353 NSRLSEVMEQN 363 (658)
Q Consensus 353 ~~~L~~fi~~~ 363 (658)
.+.|.++|+++
T Consensus 98 ~~~l~~~i~~~ 108 (109)
T 3f3q_A 98 PAAIKQAIAAN 108 (109)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 78899998764
No 321
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=96.65 E-value=0.0025 Score=54.67 Aligned_cols=92 Identities=20% Similarity=0.193 Sum_probs=60.1
Q ss_pred hhhhhhhcC-CCcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCC
Q 006171 268 GKNFLAKTG-PHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGV 342 (658)
Q Consensus 268 ~~~Fl~~~~-~~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~ 342 (658)
+++.+.... .+++.++.|. +.| ....+.+..++..|.+.+.|..+... ....++++|+|.+.||+++|+++.
T Consensus 13 ~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~~~G~- 89 (112)
T 1ep7_A 13 WDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVD--AVAAVAEAAGITAMPTFHVYKDGV- 89 (112)
T ss_dssp HHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETT--TTHHHHHHHTCCBSSEEEEEETTE-
T ss_pred HHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECC--chHHHHHHcCCCcccEEEEEECCe-
Confidence 555554311 1345566554 322 12345666677777666777777543 246899999999999999997653
Q ss_pred CeeeecCCCChHHHHHHHHhh
Q 006171 343 KPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 343 ~p~~y~g~~~~~~L~~fi~~~ 363 (658)
....+.|. +.+.|.++++..
T Consensus 90 ~~~~~~G~-~~~~l~~~l~~~ 109 (112)
T 1ep7_A 90 KADDLVGA-SQDKLKALVAKH 109 (112)
T ss_dssp EEEEEESC-CHHHHHHHHHHH
T ss_pred EEEEEcCC-CHHHHHHHHHHH
Confidence 22346787 888999998764
No 322
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=96.65 E-value=0.002 Score=60.22 Aligned_cols=93 Identities=9% Similarity=0.135 Sum_probs=64.2
Q ss_pred hhhhhhhcCCCcEEEEEEe-C---CCCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCC
Q 006171 268 GKNFLAKTGPHKVKVIFFS-K---TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (658)
Q Consensus 268 ~~~Fl~~~~~~~v~vl~f~-~---~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~ 343 (658)
+++.+.. ..++++|+-|. + .|....|.+..+|.+|.+.+.|+.|.+.+ .++++.+|+|.+.||+++|+++...
T Consensus 32 f~~~v~~-~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe--~~e~a~~y~V~siPT~~fFk~G~~v 108 (160)
T 2av4_A 32 VDQAIVN-EDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITE--VPDFNTMYELYDPVSVMFFYRNKHM 108 (160)
T ss_dssp HHHHHHH-CSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTT--CCTTTTTTTCCSSEEEEEEETTEEE
T ss_pred HHHHHHh-cCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCC--CHHHHHHcCCCCCCEEEEEECCEEE
Confidence 4444432 23456666553 2 12234688888999998778888887543 5789999999999999999987432
Q ss_pred ee--------eecCCCC-hHHHHHHHHhh
Q 006171 344 PV--------VYYGSFN-NSRLSEVMEQN 363 (658)
Q Consensus 344 p~--------~y~g~~~-~~~L~~fi~~~ 363 (658)
.+ ...|..+ .+.|.++|+.+
T Consensus 109 ~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~ 137 (160)
T 2av4_A 109 MIDLGTGNNNKINWPMNNKQEFIDIVETI 137 (160)
T ss_dssp EEECSSSCCSCBCSCCCCHHHHHHHHHHH
T ss_pred EEecCCCCcCeEEeecCCHHHHHHHHHHH
Confidence 11 2457666 88899998764
No 323
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=96.63 E-value=0.0077 Score=51.70 Aligned_cols=98 Identities=14% Similarity=0.159 Sum_probs=58.9
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEe-CCC---CCCcHHHHHHHHhh-ccCceEEEEEecccccHhHHhhcCCCCCCEEEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFS-KTG---ERASPFVRQISRNY-WAYASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~-~~~---~~~~~~~~~~A~~~-~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvl 336 (658)
+++.+.+++.+.....+++.++.|. +.| ....+.+..++..+ ...+.|..+... +...++++|+|.+.||+++
T Consensus 5 i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~ 82 (112)
T 3d6i_A 5 INDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDAD--ENSEISELFEISAVPYFII 82 (112)
T ss_dssp ECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETT--TCHHHHHHTTCCSSSEEEE
T ss_pred cCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecc--cCHHHHHHcCCCcccEEEE
Confidence 4442225555543123456666553 322 22345566677764 234677777543 2478999999999999999
Q ss_pred EeCCCCCeeeecCCCChHHHHHHHHhh
Q 006171 337 LKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 337 fk~~~~~p~~y~g~~~~~~L~~fi~~~ 363 (658)
|+++. ....+.|. ....|.++++..
T Consensus 83 ~~~G~-~~~~~~G~-~~~~l~~~l~~~ 107 (112)
T 3d6i_A 83 IHKGT-ILKELSGA-DPKEYVSLLEDC 107 (112)
T ss_dssp EETTE-EEEEECSC-CHHHHHHHHHHH
T ss_pred EECCE-EEEEecCC-CHHHHHHHHHHH
Confidence 97543 22336776 455688888763
No 324
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.61 E-value=0.002 Score=58.07 Aligned_cols=95 Identities=11% Similarity=0.085 Sum_probs=60.8
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEe-C---CCCCCcHHHHHHHHhhcc-CceEEEEEecccccHhHHhhcCCC------C
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFS-K---TGERASPFVRQISRNYWA-YASFAFVLWREEESSIWWNTFEVE------S 330 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~-~---~~~~~~~~~~~~A~~~~~-~~~f~~v~~~~~~s~~l~~~f~V~------~ 330 (658)
++.++ ++..+... ..++.+|.|. + .|....|.+..++..|.+ .+.|+.|... +...++++|+|. .
T Consensus 12 l~~~~-f~~~~~~~-~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~--~~~~~~~~~~v~~~~~~~~ 87 (137)
T 2dj0_A 12 FNDKT-IDEELERD-KRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVG--RYTDVSTRYKVSTSPLTKQ 87 (137)
T ss_dssp CCTTH-HHHHHHHS-TTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTT--TCHHHHHHTTCCCCSSSSC
T ss_pred ccHhh-HHHHHhcC-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCc--cCHHHHHHccCcccCCcCC
Confidence 45544 55555433 3445556553 2 345567888888888864 5666666432 347899999999 9
Q ss_pred CCEEEEEeCCCCCeeeecCCCChHHHHHHHH
Q 006171 331 APAIVFLKDPGVKPVVYYGSFNNSRLSEVME 361 (658)
Q Consensus 331 ~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~ 361 (658)
.||+++|+++. ....+.|..+.+.|.+|+.
T Consensus 88 ~Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~ 117 (137)
T 2dj0_A 88 LPTLILFQGGK-EAMRRPQIDKKGRAVSWTF 117 (137)
T ss_dssp SSEEEEESSSS-EEEEESCBCSSSCBCCCCC
T ss_pred CCEEEEEECCE-EEEEecCcCchHHHHHHHh
Confidence 99999997653 3334677766555555543
No 325
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=96.60 E-value=0.0023 Score=54.01 Aligned_cols=82 Identities=15% Similarity=0.241 Sum_probs=56.7
Q ss_pred CcEEEEEEeC-CC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCCh
Q 006171 278 HKVKVIFFSK-TG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (658)
Q Consensus 278 ~~v~vl~f~~-~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~ 353 (658)
+++.+++|.. .| ....+.+..++..+.+.+.|..+... +...++++|+|.+.||+++++++. ....+.|..+.
T Consensus 18 ~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~g~-~~~~~~G~~~~ 94 (105)
T 1fb6_A 18 EVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTD--EAPGIATQYNIRSIPTVLFFKNGE-RKESIIGAVPK 94 (105)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETT--TCHHHHHHTTCCSSSEEEEEETTE-EEEEEEECCCH
T ss_pred CCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCc--chHHHHHhCCCCcccEEEEEeCCe-EEEEEecCCCH
Confidence 4566665543 22 12345566677777666777777543 246799999999999999997543 23346888888
Q ss_pred HHHHHHHHh
Q 006171 354 SRLSEVMEQ 362 (658)
Q Consensus 354 ~~L~~fi~~ 362 (658)
+.|.+++++
T Consensus 95 ~~l~~~l~~ 103 (105)
T 1fb6_A 95 STLTDSIEK 103 (105)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 899999875
No 326
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=96.60 E-value=0.0035 Score=54.71 Aligned_cols=93 Identities=19% Similarity=0.139 Sum_probs=61.2
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEeC-C---CCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFSK-T---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~~-~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlf 337 (658)
+++.+.++..++. +++.++.|.. . |....+.+..++..|.+ +.|..+... +...++++|+|...||+++|
T Consensus 17 ~~~~~~~~~~~~~---~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~ 90 (114)
T 2oe3_A 17 LTNLTEFRNLIKQ---NDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVD--ESPDIAKECEVTAMPTFVLG 90 (114)
T ss_dssp CCSHHHHHHHHHH---CSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETT--TCHHHHHHTTCCSBSEEEEE
T ss_pred cCCHHHHHHHHhC---CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECC--CCHHHHHHCCCCcccEEEEE
Confidence 4554445555542 3466666643 2 22245666777777755 777777543 24679999999999999999
Q ss_pred eCCCCCeeeecCCCChHHHHHHHHh
Q 006171 338 KDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 338 k~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
+++. ....+.|.. .+.|.+++++
T Consensus 91 ~~G~-~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 91 KDGQ-LIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp ETTE-EEEEEESSC-HHHHHHHHHT
T ss_pred eCCe-EEEEEeCCC-HHHHHHHHHh
Confidence 7653 223467877 8889998874
No 327
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=96.59 E-value=0.0099 Score=49.93 Aligned_cols=90 Identities=19% Similarity=0.261 Sum_probs=57.8
Q ss_pred hhhhhhhcCCCcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCC
Q 006171 268 GKNFLAKTGPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (658)
Q Consensus 268 ~~~Fl~~~~~~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~ 343 (658)
+++.+... .+++.+++|. +.+ ....+.+..++..+. .+.|..+.... ...++++|+|.+.||+++|+++. .
T Consensus 10 ~~~~l~~~-~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~g~-~ 84 (104)
T 2vim_A 10 LEKLINEN-KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQ--NEEAAAKYSVTAMPTFVFIKDGK-E 84 (104)
T ss_dssp HHHHHHTT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT--CHHHHHHTTCCSSSEEEEEETTE-E
T ss_pred HHHHHHhc-CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccC--CHHHHHHcCCccccEEEEEeCCc-E
Confidence 45555432 3456566554 322 112355555666664 56777775432 46799999999999999998543 2
Q ss_pred eeeecCCCChHHHHHHHHhh
Q 006171 344 PVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 344 p~~y~g~~~~~~L~~fi~~~ 363 (658)
...+.| .+.+.|.+|+++.
T Consensus 85 ~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 85 VDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp EEEEES-SCHHHHHHHHHHH
T ss_pred EEEEeC-CCHHHHHHHHHhh
Confidence 234677 5888899998764
No 328
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=96.57 E-value=0.0029 Score=55.34 Aligned_cols=95 Identities=19% Similarity=0.218 Sum_probs=60.5
Q ss_pred ccchhhhhhhhhc-CCCcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEE
Q 006171 263 TKESMGKNFLAKT-GPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (658)
Q Consensus 263 t~~~~~~~Fl~~~-~~~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlf 337 (658)
+.++ ++..+... ..+++.++.|. +.| ....+.+..++..|.+ +.|..+...+ ...++++|+|.+.||+++|
T Consensus 19 ~~~~-~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~ 94 (122)
T 2vlu_A 19 SLEQ-WTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDE--LKPIAEQFSVEAMPTFLFM 94 (122)
T ss_dssp SHHH-HHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT--CHHHHHHTTCCSSSEEEEE
T ss_pred CHHH-HHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCC--CHHHHHHcCCCcccEEEEE
Confidence 4334 45544431 13455566554 322 1224556667777765 6777775432 4779999999999999999
Q ss_pred eCCCCCeeeecCCCChHHHHHHHHhh
Q 006171 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 338 k~~~~~p~~y~g~~~~~~L~~fi~~~ 363 (658)
+++. ....+.|.. .+.|.+|++..
T Consensus 95 ~~G~-~~~~~~G~~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 95 KEGD-VKDRVVGAI-KEELTAKVGLH 118 (122)
T ss_dssp ETTE-EEEEEESSC-HHHHHHHHHHH
T ss_pred eCCE-EEEEEeCcC-HHHHHHHHHHH
Confidence 7653 233477887 88899998864
No 329
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=96.55 E-value=0.0047 Score=53.36 Aligned_cols=82 Identities=15% Similarity=0.211 Sum_probs=56.0
Q ss_pred CcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCCh
Q 006171 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (658)
Q Consensus 278 ~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~ 353 (658)
+++.++.|. +.| ....+.+..++..+. .+.|..+... ...+++++|+|.+.||+++|+++. ....+.|..+.
T Consensus 19 ~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~~~G~-~v~~~~G~~~~ 94 (110)
T 2l6c_A 19 LSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSE--ARPELMKELGFERVPTLVFIRDGK-VAKVFSGIMNP 94 (110)
T ss_dssp CSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGG--GCHHHHHHTTCCSSCEEEEEESSS-EEEEEESCCCH
T ss_pred CCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCc--CCHHHHHHcCCcccCEEEEEECCE-EEEEEcCCCCH
Confidence 456566554 322 123455566666654 5677777543 247899999999999999997653 33347898899
Q ss_pred HHHHHHHHhh
Q 006171 354 SRLSEVMEQN 363 (658)
Q Consensus 354 ~~L~~fi~~~ 363 (658)
+.|.+++...
T Consensus 95 ~~l~~~~~~~ 104 (110)
T 2l6c_A 95 RELQALYASI 104 (110)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHHH
Confidence 9999998864
No 330
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.51 E-value=0.0031 Score=56.06 Aligned_cols=85 Identities=19% Similarity=0.279 Sum_probs=56.9
Q ss_pred CcEEEEEEeCC-C---CCCcHHHHHHHHhhcc--CceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCC-Ceeeec-C
Q 006171 278 HKVKVIFFSKT-G---ERASPFVRQISRNYWA--YASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGV-KPVVYY-G 349 (658)
Q Consensus 278 ~~v~vl~f~~~-~---~~~~~~~~~~A~~~~~--~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~-~p~~y~-g 349 (658)
+++.+|.|... | ....|.+..++..|.. .+.|+.+... ....++++|+|..+||+++|++++. .++.|. |
T Consensus 25 ~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~~gg 102 (133)
T 2dj3_A 25 KKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDAT--ANDITNDQYKVEGFPTIYFAPSGDKKNPIKFEGG 102 (133)
T ss_dssp TSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTT--TSCCCCSSCCCSSSSEEEEECTTCTTSCEECCSS
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCC--cCHHHHhhcCCCcCCEEEEEeCCCcccceEecCC
Confidence 45667766432 2 2234566667777763 4555555322 2356888999999999999987654 334576 5
Q ss_pred CCChHHHHHHHHhhc
Q 006171 350 SFNNSRLSEVMEQNK 364 (658)
Q Consensus 350 ~~~~~~L~~fi~~~~ 364 (658)
..+.+.|.+|++.+.
T Consensus 103 ~~~~~~l~~~l~~~~ 117 (133)
T 2dj3_A 103 NRDLEHLSKFIDEHA 117 (133)
T ss_dssp CCSTTHHHHHHHHHS
T ss_pred CcCHHHHHHHHHHhc
Confidence 588899999998864
No 331
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=96.49 E-value=0.0017 Score=61.64 Aligned_cols=54 Identities=9% Similarity=0.095 Sum_probs=40.8
Q ss_pred CCcEEEEEe-ccCCCCCCCChHHHHHHHHHhhccc-ceeeeecccchhhhHHHhhC
Q 006171 153 SKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIA-NTGMVELGDIRLATHLAERK 206 (658)
Q Consensus 153 ~~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~~-~vg~Vdc~e~~~~~~Lc~k~ 206 (658)
+++++|.|| +.||+.|..-.|.+.++.++++... .|..|.++........++++
T Consensus 51 Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~ 106 (179)
T 3ixr_A 51 NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQ 106 (179)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHH
T ss_pred CCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc
Confidence 567888887 9999999999999999999998654 77778877433333344443
No 332
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=96.48 E-value=0.00098 Score=61.70 Aligned_cols=53 Identities=15% Similarity=0.236 Sum_probs=38.7
Q ss_pred EEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccc---hh-hhHHHhhCCCCcccceeeeeEEE
Q 006171 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI---RL-ATHLAERKPIGQIFFRRGLPSLV 221 (658)
Q Consensus 157 lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~---~~-~~~Lc~k~~i~k~f~V~~yPTl~ 221 (658)
++.|++|||++|+++.+.++++. +.+..||++.+ +. ...|++.++ +.++|+|.
T Consensus 51 Vvvf~~~~Cp~C~~~k~~L~~~~------i~~~~vdId~~~~~~~~~~~L~~~~g------~~tvP~if 107 (146)
T 2ht9_A 51 VVIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTG------ERTVPRIF 107 (146)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCTTHHHHHHHHHHHHS------CCCSCEEE
T ss_pred EEEEECCCChhHHHHHHHHHHcC------CCeEEEECccCcCCHHHHHHHHHHhC------CCCcCeEE
Confidence 34499999999999999887753 35667777743 21 124778888 88999984
No 333
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=96.48 E-value=0.0062 Score=52.55 Aligned_cols=92 Identities=20% Similarity=0.244 Sum_probs=59.9
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEeC-CC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFSK-TG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~~-~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlf 337 (658)
++..+ +++.++ .+++.+++|.. .| ....+.+..++..+. .+.|..+.... ...++++|+|...||+++|
T Consensus 14 ~~~~~-f~~~~~---~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~v~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~ 86 (112)
T 1syr_A 14 TSQAE-FDSIIS---QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVDE--VSEVTEKENITSMPTFKVY 86 (112)
T ss_dssp CSHHH-HHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT--THHHHHHTTCCSSSEEEEE
T ss_pred CCHHH-HHHHHc---cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCC--CHHHHHHcCCCcccEEEEE
Confidence 34444 555654 34566666643 22 123455566676664 46677765432 4679999999999999999
Q ss_pred eCCCCCeeeecCCCChHHHHHHHHh
Q 006171 338 KDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 338 k~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
+++. ....+.|. +.+.|.++++.
T Consensus 87 ~~G~-~~~~~~G~-~~~~l~~~l~~ 109 (112)
T 1syr_A 87 KNGS-SVDTLLGA-NDSALKQLIEK 109 (112)
T ss_dssp ETTE-EEEEEESC-CHHHHHHHHHT
T ss_pred ECCc-EEEEEeCC-CHHHHHHHHHH
Confidence 8643 33346788 88999999876
No 334
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=96.45 E-value=0.0051 Score=54.80 Aligned_cols=94 Identities=14% Similarity=0.077 Sum_probs=61.2
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEe-CC---CCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFS-KT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~-~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlf 337 (658)
+++.+.+++.+. .+++.+|.|. +. |....+.+..++..|. .+.|+.+... +...++++|+|...||+++|
T Consensus 24 l~~~~~f~~~~~---~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d--~~~~l~~~~~v~~~Pt~~i~ 97 (125)
T 1r26_A 24 VYSVEQFRNIMS---EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDAD--NNSEIVSKCRVLQLPTFIIA 97 (125)
T ss_dssp ECCHHHHHHHHH---SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETT--TCHHHHHHTTCCSSSEEEEE
T ss_pred CCCHHHHHHHHc---cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECC--CCHHHHHHcCCCcccEEEEE
Confidence 555232555553 3345566553 32 2234566777777773 5777777643 24779999999999999999
Q ss_pred eCCCCCeeeecCCCChHHHHHHHHhh
Q 006171 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 338 k~~~~~p~~y~g~~~~~~L~~fi~~~ 363 (658)
+++. ....+.| .+.+.|.++++..
T Consensus 98 ~~G~-~~~~~~G-~~~~~l~~~l~~~ 121 (125)
T 1r26_A 98 RSGK-MLGHVIG-ANPGMLRQKLRDI 121 (125)
T ss_dssp ETTE-EEEEEES-SCHHHHHHHHHHH
T ss_pred eCCe-EEEEEeC-CCHHHHHHHHHHH
Confidence 7653 2234678 5888899988763
No 335
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=96.45 E-value=0.0027 Score=59.75 Aligned_cols=36 Identities=11% Similarity=0.142 Sum_probs=30.3
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHh--hcccc
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALL--EGIAN 187 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l--~g~~~ 187 (658)
+.++.++.|+.+||+||+++.|...++.+++ .+.++
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~ 63 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVE 63 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEE
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEE
Confidence 4567899999999999999999999988887 55443
No 336
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=96.42 E-value=0.0023 Score=59.76 Aligned_cols=55 Identities=13% Similarity=0.069 Sum_probs=41.2
Q ss_pred CCCcEEEEEe-ccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCC
Q 006171 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKP 207 (658)
Q Consensus 152 ~~~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~ 207 (658)
.+++++|.|| +.||++|..-.|.+.++.+++ ..+.|..|+++........+++++
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~ 97 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SNTIVLCISADLPFAQARFCGAEG 97 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSCHHHHTTCTTTTT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHcC
Confidence 3578999998 899999999999999999988 445778888874333333445554
No 337
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=96.42 E-value=0.0049 Score=53.69 Aligned_cols=81 Identities=21% Similarity=0.177 Sum_probs=56.6
Q ss_pred CcEEEEEE-eCCC---CCCcHHHHHHHHhhcc-----CceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCC-eeee
Q 006171 278 HKVKVIFF-SKTG---ERASPFVRQISRNYWA-----YASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK-PVVY 347 (658)
Q Consensus 278 ~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~-----~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~-p~~y 347 (658)
+++.+|.| .+.| ....|.+..++..|.+ .+.|+.+..... .+++ +|.++||+++|++++.. ...|
T Consensus 25 ~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~---~~~~--~v~~~Pt~~~~~~~~~~~~~~~ 99 (121)
T 2djj_A 25 TKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAN---DVPD--EIQGFPTIKLYPAGAKGQPVTY 99 (121)
T ss_dssp TSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTS---CCSS--CCSSSSEEEEECSSCTTSCCCC
T ss_pred CCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccc---cccc--ccCcCCeEEEEeCcCCCCceEe
Confidence 45555655 3322 2235667778888875 677777764332 3555 99999999999887542 5568
Q ss_pred cCCCChHHHHHHHHhh
Q 006171 348 YGSFNNSRLSEVMEQN 363 (658)
Q Consensus 348 ~g~~~~~~L~~fi~~~ 363 (658)
.|..+.+.|.+|++++
T Consensus 100 ~G~~~~~~l~~~i~~~ 115 (121)
T 2djj_A 100 SGSRTVEDLIKFIAEN 115 (121)
T ss_dssp CCCSCHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHhc
Confidence 9999999999999875
No 338
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=96.36 E-value=0.0046 Score=61.91 Aligned_cols=98 Identities=13% Similarity=0.029 Sum_probs=64.9
Q ss_pred CCCcEEEEEec-cCCCCCCCChHHHHHHHHHhhccc-ceeeeecccchhhhHHHhhC-------C------------CCc
Q 006171 152 DSKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGIA-NTGMVELGDIRLATHLAERK-------P------------IGQ 210 (658)
Q Consensus 152 ~~~~~lV~FYa-pwC~~Ck~l~P~w~~~A~~l~g~~-~vg~Vdc~e~~~~~~Lc~k~-------~------------i~k 210 (658)
.+++++|.||+ .||+.|..-.|.+.++.++++... .|..|+++........++++ + +.+
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~ 155 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISK 155 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHH
Confidence 35789999999 999999999999999999997653 77788887433323333332 1 122
Q ss_pred cccee------eeeEEEEcCCCCCCCCCcccccC----CCCHhHHHHHHHHh
Q 006171 211 IFFRR------GLPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (658)
Q Consensus 211 ~f~V~------~yPTl~~f~~g~~~~~~~~~Y~G----~rs~~~Lv~fv~k~ 252 (658)
.|.+. .+|+.+++-+.+. ....+.| .++.+.+++.+...
T Consensus 156 ~ygv~~~~~g~~~p~~flID~~G~---I~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 156 DYGVYLEDQGHTLRGLFIIDEKGV---LRQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HTTCEETTTTEECEEEEEECTTSB---EEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HhCCccccCCCccceEEEEcCCCe---EEEEEecCCCCCCCHHHHHHHHHHh
Confidence 44476 6899888854433 1122222 45678888777553
No 339
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=96.34 E-value=0.0031 Score=58.80 Aligned_cols=56 Identities=13% Similarity=0.077 Sum_probs=44.9
Q ss_pred CCCcEEEEEe-ccCCCCCC-CChHHHHHHHHHhhcc-cc-eeeeecccchhhhHHHhhCC
Q 006171 152 DSKPWLIQVY-SDGSYLCG-QFSGAWKTIAALLEGI-AN-TGMVELGDIRLATHLAERKP 207 (658)
Q Consensus 152 ~~~~~lV~FY-apwC~~Ck-~l~P~w~~~A~~l~g~-~~-vg~Vdc~e~~~~~~Lc~k~~ 207 (658)
.+++++|.|| +.||+.|. .-.|.+.++.++++.. +. |..|+.+........+++++
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~ 93 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYP 93 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcC
Confidence 3578899999 89999999 8999999999999754 36 88888875444556777777
No 340
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=96.34 E-value=0.011 Score=47.75 Aligned_cols=77 Identities=16% Similarity=0.244 Sum_probs=54.9
Q ss_pred EEEEEEeC----CCCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHH
Q 006171 280 VKVIFFSK----TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSR 355 (658)
Q Consensus 280 v~vl~f~~----~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~ 355 (658)
+.+++|.. .+....+.+..++..|.+.+.|..+...+ ..+++++|+|.+.||+++ ++ +. .+.|..+.+.
T Consensus 4 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~--~G--~~-~~~G~~~~~~ 76 (85)
T 1fo5_A 4 VKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVME--NPQKAMEYGIMAVPTIVI--NG--DV-EFIGAPTKEA 76 (85)
T ss_dssp EEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSS--SCCTTTSTTTCCSSEEEE--TT--EE-ECCSSSSSHH
T ss_pred eEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCC--CHHHHHHCCCcccCEEEE--CC--EE-eeecCCCHHH
Confidence 45555532 23345677777888887667777776543 457899999999999988 33 22 5788888899
Q ss_pred HHHHHHhh
Q 006171 356 LSEVMEQN 363 (658)
Q Consensus 356 L~~fi~~~ 363 (658)
|.+++++.
T Consensus 77 l~~~l~~~ 84 (85)
T 1fo5_A 77 LVEAIKKR 84 (85)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998763
No 341
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=96.33 E-value=0.0078 Score=54.21 Aligned_cols=68 Identities=18% Similarity=0.230 Sum_probs=51.6
Q ss_pred cHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHhh
Q 006171 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~~ 363 (658)
.+.+..++..|.+.+.|+.+.... ...++++|+|.++||+++|+++. ....+.|..+.+.|.+|++..
T Consensus 69 ~~~l~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G~-~~~~~~G~~~~~~l~~~i~~~ 136 (140)
T 1v98_A 69 SPILEELARDHAGRLKVVKVNVDE--HPGLAARYGVRSVPTLVLFRRGA-PVATWVGASPRRVLEERLRPY 136 (140)
T ss_dssp HHHHHHHHHHTTTTEEEEEEETTT--CHHHHHHTTCCSSSEEEEEETTE-EEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCceEEEEEECCC--CHHHHHHCCCCccCEEEEEeCCc-EEEEEeCCCCHHHHHHHHHHH
Confidence 466666777776667777776433 46899999999999999997653 233478988889999999764
No 342
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=96.33 E-value=0.0054 Score=60.26 Aligned_cols=84 Identities=13% Similarity=0.222 Sum_probs=60.7
Q ss_pred CcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCCh
Q 006171 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (658)
Q Consensus 278 ~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~ 353 (658)
+++.+|.|. +-| ....|.+..++..|.+.+.|+.|.... ...++++|+|.++||+++|+++. ....+.|..+.
T Consensus 30 ~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~G~-~~~~~~G~~~~ 106 (222)
T 3dxb_A 30 DGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRGIPTLLLFKNGE-VAATKVGALSK 106 (222)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CTTTGGGGTCCSBSEEEEEETTE-EEEEEESCCCH
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCC--CHHHHHHcCCCcCCEEEEEECCe-EEEEeccccCh
Confidence 456566553 322 223566777888887777777776433 46799999999999999998643 33357899999
Q ss_pred HHHHHHHHhhc
Q 006171 354 SRLSEVMEQNK 364 (658)
Q Consensus 354 ~~L~~fi~~~~ 364 (658)
+.|.+|++...
T Consensus 107 ~~l~~~l~~~l 117 (222)
T 3dxb_A 107 GQLKEFLDANL 117 (222)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHhhc
Confidence 99999998743
No 343
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=96.32 E-value=0.0062 Score=61.56 Aligned_cols=97 Identities=13% Similarity=0.030 Sum_probs=63.2
Q ss_pred CCCcEEEEEe-ccCCCCCCCChHHHHHHHHHhhccc-ceeeeecccchhhhHHHhhC-------CC------------Cc
Q 006171 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIA-NTGMVELGDIRLATHLAERK-------PI------------GQ 210 (658)
Q Consensus 152 ~~~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~~-~vg~Vdc~e~~~~~~Lc~k~-------~i------------~k 210 (658)
.+++++|.|| +.||+.|..-.|.+.++.++++... .|..|+++........++++ ++ .+
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~ 169 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 169 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHH
Confidence 3578899998 9999999999999999999997653 77788887433323333322 11 12
Q ss_pred cccee------eeeEEEEcCCCCCCCCCcccccC----CCCHhHHHHHHHH
Q 006171 211 IFFRR------GLPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFAT 251 (658)
Q Consensus 211 ~f~V~------~yPTl~~f~~g~~~~~~~~~Y~G----~rs~~~Lv~fv~k 251 (658)
.|.|. .+|+.+++-+.+. ....+.| .++.+.+++.+..
T Consensus 170 ~ygv~~~~~g~~~p~tflID~~G~---I~~~~~~~~~~~~~~~eil~~L~a 217 (254)
T 3tjj_A 170 DYGVYLEDSGHTLRGLFIIDDKGI---LRQITLNDLPVGRSVDETLRLVQA 217 (254)
T ss_dssp HHTCEETTTTEECEEEEEECTTSB---EEEEEEECTTCCCCHHHHHHHHHH
T ss_pred HcCCccccCCCccceEEEECCCCe---EEEEEecCCCCCCCHHHHHHHHHh
Confidence 34464 5798888865443 1122223 4567777777654
No 344
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=96.30 E-value=0.0008 Score=59.80 Aligned_cols=59 Identities=14% Similarity=0.290 Sum_probs=41.6
Q ss_pred EEEEeccCCCCCCCC-hHHHHHHHHHhhcccceeeeecccch----hhhHHHhhCCCCcccceeeeeEEEEcCCC
Q 006171 157 LIQVYSDGSYLCGQF-SGAWKTIAALLEGIANTGMVELGDIR----LATHLAERKPIGQIFFRRGLPSLVAFPPG 226 (658)
Q Consensus 157 lV~FYapwC~~Ck~l-~P~w~~~A~~l~g~~~vg~Vdc~e~~----~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g 226 (658)
++.|++|||++|+++ .+.+++... ..+.+..||.++++ ....|++.++ +.++|+| |.+|
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~~~---~~i~~~~vdid~~~~~~~~~~~l~~~~g------~~tvP~v--fi~g 90 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKLKV---PRSKVLVLQLNDMKEGADIQAALYEING------QRTVPNI--YING 90 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTSCC---CGGGEEEEEGGGSTTHHHHHHHHHHHHS------CCSSCEE--EETT
T ss_pred EEEEEcCCCcCHHHHHHHHHHHcCC---CCCCeEEEECccCCChHHHHHHHHHHhC------CCCcCEE--EECC
Confidence 566999999999988 776655431 22577888888543 2234777888 7899997 4455
No 345
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=96.29 E-value=0.0088 Score=56.13 Aligned_cols=97 Identities=9% Similarity=-0.059 Sum_probs=64.4
Q ss_pred CCcEEEEEeccCCCC-CCCChHHHHHHHHHhhc---ccceeeeeccc----------------------------chhhh
Q 006171 153 SKPWLIQVYSDGSYL-CGQFSGAWKTIAALLEG---IANTGMVELGD----------------------------IRLAT 200 (658)
Q Consensus 153 ~~~~lV~FYapwC~~-Ck~l~P~w~~~A~~l~g---~~~vg~Vdc~e----------------------------~~~~~ 200 (658)
+++++|.||+.||+. |....|.+.++.++++. .+.+..|.++. .....
T Consensus 28 Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~ 107 (170)
T 3me7_A 28 GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLF 107 (170)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHH
T ss_pred CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHH
Confidence 689999999999985 99999999999999853 24566666541 01223
Q ss_pred HHHhhCCCCc---ccceeeeeEEEEcCCCCCCCCCcccccCC-CCHhHHHHHHHHh
Q 006171 201 HLAERKPIGQ---IFFRRGLPSLVAFPPGCKSSDCMTRFEGE-LSVDAVTDWFATA 252 (658)
Q Consensus 201 ~Lc~k~~i~k---~f~V~~yPTl~~f~~g~~~~~~~~~Y~G~-rs~~~Lv~fv~k~ 252 (658)
.+++.+|+.- .+.+...|+++++-+.+. ....|.|. .+.++|...+.+.
T Consensus 108 ~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~---i~~~~~g~~~~~~~i~~~l~~~ 160 (170)
T 3me7_A 108 KLLDAIDFRFMTAGNDFIHPNVVVVLSPELQ---IKDYIYGVNYNYLEFVNALRLA 160 (170)
T ss_dssp HHHHHTTCCCEEETTEEECCCEEEEECTTSB---EEEEEESSSCCHHHHHHHHHHH
T ss_pred HHHHHCCeEEecCCCccccCceEEEECCCCe---EEEEEeCCCCCHHHHHHHHHHh
Confidence 4566555321 123556788888754443 22345664 6788898888776
No 346
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=96.29 E-value=0.0064 Score=52.81 Aligned_cols=95 Identities=15% Similarity=0.219 Sum_probs=59.0
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlf 337 (658)
+++.+.++..+... .+++.++.|. +.| ....+.+..++..| .+.|+.+... +...++++|+|.+.||+++|
T Consensus 18 l~~~~~~~~~l~~~-~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~ 92 (117)
T 2xc2_A 18 LKQDGDLESLLEQH-KNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVD--KLEETARKYNISAMPTFIAI 92 (117)
T ss_dssp CCSTTHHHHHHHHT-TTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETT--TSHHHHHHTTCCSSSEEEEE
T ss_pred eCCHHHHHHHHHhC-CCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECC--ccHHHHHHcCCCccceEEEE
Confidence 44423355555532 3455566554 322 12245555566665 5666666532 34779999999999999999
Q ss_pred eCCCCCeeeecCCCChHHHHHHHHhh
Q 006171 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 338 k~~~~~p~~y~g~~~~~~L~~fi~~~ 363 (658)
+++. ....+.| .+.+.|.+++++.
T Consensus 93 ~~G~-~~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 93 KNGE-KVGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp ETTE-EEEEEES-SCHHHHHHHHHHH
T ss_pred eCCc-EEEEEeC-CCHHHHHHHHHHh
Confidence 7653 2334677 5788899998763
No 347
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=96.28 E-value=0.0018 Score=52.59 Aligned_cols=71 Identities=11% Similarity=0.123 Sum_probs=47.2
Q ss_pred EEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccch-hhhHHHhhCCCCcccceeeeeEEEEcCCCCCCCCCccc
Q 006171 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR-LATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTR 235 (658)
Q Consensus 157 lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~-~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~~~~~~ 235 (658)
++.|+++||++|+++.+.+++. + +.+..+|.++++ ....+.+.++ +.++|++. .+|..
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-----~-i~~~~~~i~~~~~~~~~~~~~~~------~~~vP~l~--~~g~~------- 61 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK-----G-VSFQELPIDGNAAKREEMIKRSG------RTTVPQIF--IDAQH------- 61 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-----T-CCCEEEECTTCSHHHHHHHHHHS------SCCSCEEE--ETTEE-------
T ss_pred EEEEECCCChhHHHHHHHHHHC-----C-CCcEEEECCCCHHHHHHHHHHhC------CCCcCEEE--ECCEE-------
Confidence 6779999999999988877654 2 467778877532 2234666777 77999984 35521
Q ss_pred ccCCCCHhHHHHHHHH
Q 006171 236 FEGELSVDAVTDWFAT 251 (658)
Q Consensus 236 Y~G~rs~~~Lv~fv~k 251 (658)
..| .++|.+++..
T Consensus 62 i~g---~~~i~~~~~~ 74 (82)
T 1fov_A 62 IGG---YDDLYALDAR 74 (82)
T ss_dssp EES---HHHHHHHHHT
T ss_pred EeC---HHHHHHHHHC
Confidence 122 4667777643
No 348
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=96.23 E-value=0.013 Score=47.43 Aligned_cols=68 Identities=12% Similarity=0.078 Sum_probs=51.3
Q ss_pred CCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHhh
Q 006171 289 GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 289 ~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~~ 363 (658)
+....+.+..++..|.+.+.|..+...+ ...++++|+|.+.||+++ ++ +. .+.|..+.+.|.+++++.
T Consensus 16 C~~~~~~l~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~--~G--~~-~~~G~~~~~~l~~~l~~~ 83 (85)
T 1nho_A 16 CPMAIEVVDEAKKEFGDKIDVEKIDIMV--DREKAIEYGLMAVPAIAI--NG--VV-RFVGAPSREELFEAINDE 83 (85)
T ss_dssp STTHHHHHHHHHHHHCSSCCEEEECTTT--CGGGGGGTCSSCSSEEEE--TT--TE-EEECSSCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCeEEEEEECCC--CHHHHHhCCceeeCEEEE--CC--EE-EEccCCCHHHHHHHHHHH
Confidence 3445677777888887677888876433 467999999999999998 33 22 578888889999998764
No 349
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=96.15 E-value=0.004 Score=59.40 Aligned_cols=35 Identities=11% Similarity=0.168 Sum_probs=29.6
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhccc
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIA 186 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~ 186 (658)
..++.++.|+.+||++|..+.|.+.++.+++.+.+
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v 58 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDV 58 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTE
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCCce
Confidence 35678999999999999999999999988775443
No 350
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=96.14 E-value=0.0085 Score=53.06 Aligned_cols=91 Identities=16% Similarity=0.188 Sum_probs=57.1
Q ss_pred hhhhhhhc-CCCcEEEEEEeC-CC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCC
Q 006171 268 GKNFLAKT-GPHKVKVIFFSK-TG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGV 342 (658)
Q Consensus 268 ~~~Fl~~~-~~~~v~vl~f~~-~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~ 342 (658)
++..+... ..+++.++.|.. .| ....+.+..++..|. .+.|..+... +...++++|+|...||+++|+++.
T Consensus 27 ~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d--~~~~l~~~~~v~~~Pt~~~~~~G~- 102 (124)
T 1xfl_A 27 WNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTD--ELKSVASDWAIQAMPTFMFLKEGK- 102 (124)
T ss_dssp HHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETT--TSHHHHHHTTCCSSSEEEEEETTE-
T ss_pred HHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECc--cCHHHHHHcCCCccCEEEEEECCE-
Confidence 45555432 134566666643 22 123455666777664 4556665432 347899999999999999997653
Q ss_pred CeeeecCCCChHHHHHHHHhh
Q 006171 343 KPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 343 ~p~~y~g~~~~~~L~~fi~~~ 363 (658)
....+.| .+.+.|.+++++.
T Consensus 103 ~~~~~~G-~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 103 ILDKVVG-AKKDELQSTIAKH 122 (124)
T ss_dssp EEEEEES-CCHHHHHHHHHHH
T ss_pred EEEEEeC-CCHHHHHHHHHHh
Confidence 2223567 4888899998763
No 351
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=96.14 E-value=0.0099 Score=54.88 Aligned_cols=108 Identities=13% Similarity=0.058 Sum_probs=74.7
Q ss_pred eEEEecCCCCCccccCCCcEEEE-EeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCccccee
Q 006171 137 AFNVVTSEDFPSIFHDSKPWLIQ-VYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (658)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~-FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~ 215 (658)
-|.++|.+|+.....+.-+..+. |..+--..-..+.+.++++|+.++|.+.++.||.++. ....+.+.+| ++
T Consensus 15 LV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~-~~~~~l~~fG------l~ 87 (147)
T 3bj5_A 15 LVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHT-DNQRILEFFG------LK 87 (147)
T ss_dssp CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCG-GGHHHHHHTT------CC
T ss_pred eeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchH-hHHHHHHHcC------CC
Confidence 47889999987776665555544 4433333344578899999999999999999998322 2234778888 55
Q ss_pred e--eeEEEEcCC-CCCCCCCcccc-cCCCCHhHHHHHHHHhhc
Q 006171 216 G--LPSLVAFPP-GCKSSDCMTRF-EGELSVDAVTDWFATAIL 254 (658)
Q Consensus 216 ~--yPTl~~f~~-g~~~~~~~~~Y-~G~rs~~~Lv~fv~k~v~ 254 (658)
. .|++.++.. +.. ....+ .|..+.+.|.+|+.+.+.
T Consensus 88 ~~~~P~v~i~~~~~~~---~Ky~~~~~~~t~~~i~~Fv~d~l~ 127 (147)
T 3bj5_A 88 KEECPAVRLITLEEEM---TKYKPESEELTAERITEFCHRFLE 127 (147)
T ss_dssp GGGCSEEEEEECSSSC---EEECCSCCCCCHHHHHHHHHHHHT
T ss_pred cccCCEEEEEeccccc---ccCCCCcccCCHHHHHHHHHHHHc
Confidence 4 999999864 221 01222 378899999999988743
No 352
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=96.10 E-value=0.0025 Score=53.32 Aligned_cols=72 Identities=6% Similarity=0.032 Sum_probs=47.6
Q ss_pred EEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecc-----cc-hhhhHHHhhCCCCcccceeeeeEEEEcCCCCCCC
Q 006171 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG-----DI-RLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSS 230 (658)
Q Consensus 157 lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~-----e~-~~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~ 230 (658)
++.|+++||++|+++.+..++.. +.+-.+|.+ ++ .....+.+.++ +.++|+|.+ +|.
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~g------i~~~~~~v~~~~~~~~~~~~~~l~~~~g------~~~vP~l~~--~g~--- 76 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREG------VDFEVIWIDKLEGEERKKVIEKVHSISG------SYSVPVVVK--GDK--- 76 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCCHHHHHHHHHHHHHHHS------SSCSCEEEE--TTE---
T ss_pred EEEEECCCChHHHHHHHHHHHcC------CCcEEEEeeeCCccchHHHHHHHHHhcC------CCCcCEEEE--CCE---
Confidence 66788999999999887776653 234445554 11 11245667777 779999987 442
Q ss_pred CCcccccCCCCHhHHHHHHH
Q 006171 231 DCMTRFEGELSVDAVTDWFA 250 (658)
Q Consensus 231 ~~~~~Y~G~rs~~~Lv~fv~ 250 (658)
. -|..+.+.|.+++.
T Consensus 77 ----~-i~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 77 ----H-VLGYNEEKLKELIR 91 (92)
T ss_dssp ----E-EESCCHHHHHHHHH
T ss_pred ----E-EeCCCHHHHHHHhc
Confidence 1 34458888888764
No 353
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=96.09 E-value=0.0028 Score=59.85 Aligned_cols=61 Identities=11% Similarity=0.084 Sum_probs=47.3
Q ss_pred CCcEEEEEeccCCCCCCCC-hHHHHHHHHHhhcc-cc-eeeeecccchhhhHHHhhCCCCccccee-eeeE
Q 006171 153 SKPWLIQVYSDGSYLCGQF-SGAWKTIAALLEGI-AN-TGMVELGDIRLATHLAERKPIGQIFFRR-GLPS 219 (658)
Q Consensus 153 ~~~~lV~FYapwC~~Ck~l-~P~w~~~A~~l~g~-~~-vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~-~yPT 219 (658)
+.++|+.|++.||+.|..- .|.+.++.++++.. +. |..|+.+........+++++ +. .||.
T Consensus 44 k~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~------~~~~fp~ 108 (171)
T 2pwj_A 44 KKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQ------AKDAIEF 108 (171)
T ss_dssp SEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTT------CTTTSEE
T ss_pred CCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhC------CCCceEE
Confidence 3577889999999999986 99999999998754 36 88888875444556778877 53 6773
No 354
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=96.06 E-value=0.0013 Score=63.40 Aligned_cols=43 Identities=7% Similarity=-0.007 Sum_probs=36.3
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecc
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG 194 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~ 194 (658)
+.++.+|+|+++||+||+++.|.++++++.+.+.+.+..++..
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTTEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCCCeEEEEecCC
Confidence 4678999999999999999999999999887665566666664
No 355
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=96.06 E-value=0.012 Score=54.01 Aligned_cols=97 Identities=13% Similarity=0.194 Sum_probs=61.0
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlf 337 (658)
+++.+.++..+... .+++.+|.|. +.| ....+.+..++..| ..+.|+.|.... ...++++|+|.++||+++|
T Consensus 17 l~~~~~~~~~~~~~-~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~ 92 (153)
T 2wz9_A 17 VGSAGQFEELLRLK-AKSLLVVHFWAPWAPQCAQMNEVMAELAKEL-PQVSFVKLEAEG--VPEVSEKYEISSVPTFLFF 92 (153)
T ss_dssp ECSHHHHHHHHHHT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTT--SHHHHHHTTCCSSSEEEEE
T ss_pred cCCHHHHHHHHHhc-CCCeEEEEEECCCCHhHHHHHHHHHHHHHHc-CCeEEEEEECCC--CHHHHHHcCCCCCCEEEEE
Confidence 44433356666543 2455566554 322 22345566677666 357777775432 4679999999999999999
Q ss_pred eCCCCCeeeecCCCChHHHHHHHHhhc
Q 006171 338 KDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (658)
Q Consensus 338 k~~~~~p~~y~g~~~~~~L~~fi~~~~ 364 (658)
+++ .....+.| .+.+.|.++++...
T Consensus 93 ~~G-~~~~~~~G-~~~~~l~~~i~~~l 117 (153)
T 2wz9_A 93 KNS-QKIDRLDG-AHAPELTKKVQRHA 117 (153)
T ss_dssp ETT-EEEEEEES-SCHHHHHHHHHHHS
T ss_pred ECC-EEEEEEeC-CCHHHHHHHHHHHh
Confidence 943 32223566 47788999998753
No 356
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=96.02 E-value=0.0031 Score=54.48 Aligned_cols=65 Identities=8% Similarity=0.055 Sum_probs=43.6
Q ss_pred CCccccCCCcEEEEEec-----cCCCCCCCChHHHHHHHHHhhcccceeeeecccchhh-hHHHhhCCCCcccceeeeeE
Q 006171 146 FPSIFHDSKPWLIQVYS-----DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRGLPS 219 (658)
Q Consensus 146 F~~~v~~~~~~lV~FYa-----pwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~-~~Lc~k~~i~k~f~V~~yPT 219 (658)
+++.+..+. ++.|++ |||++|+++.+.+++.. +.+..+|.++++.. ..+.+.++ +.++|+
T Consensus 10 ~~~~i~~~~--vvvf~~g~~~~~~C~~C~~~~~~L~~~~------i~~~~vdi~~~~~~~~~l~~~~g------~~~vP~ 75 (105)
T 2yan_A 10 LKVLTNKAS--VMLFMKGNKQEAKCGFSKQILEILNSTG------VEYETFDILEDEEVRQGLKAYSN------WPTYPQ 75 (105)
T ss_dssp HHHHHTSSS--EEEEESBCSSSBCTTHHHHHHHHHHHHT------CCCEEEEGGGCHHHHHHHHHHHT------CCSSCE
T ss_pred HHHHhccCC--EEEEEecCCCCCCCccHHHHHHHHHHCC------CCeEEEECCCCHHHHHHHHHHHC------CCCCCe
Confidence 334444443 344777 99999999888877653 47888898855432 23566667 779999
Q ss_pred EEEcCCC
Q 006171 220 LVAFPPG 226 (658)
Q Consensus 220 l~~f~~g 226 (658)
|. .+|
T Consensus 76 v~--i~g 80 (105)
T 2yan_A 76 LY--VKG 80 (105)
T ss_dssp EE--ETT
T ss_pred EE--ECC
Confidence 84 455
No 357
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=95.97 E-value=0.0023 Score=59.93 Aligned_cols=62 Identities=11% Similarity=0.033 Sum_probs=47.8
Q ss_pred CCCcEEEEEe-ccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeeeEE
Q 006171 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSL 220 (658)
Q Consensus 152 ~~~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl 220 (658)
.+++++|.|| +.||+.|....|.+.++.+++ ..+.|..|+++........+++++ +..||.+
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~------~~~~~~l 108 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLPFAQKRFCESFN------IQNVTVA 108 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHTT------CCSSEEE
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCHHHHHHHHHHcC------CCCeEEe
Confidence 3578999998 899999999999999998888 445788888875444555777777 5456644
No 358
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=95.96 E-value=0.009 Score=51.10 Aligned_cols=91 Identities=21% Similarity=0.304 Sum_probs=56.9
Q ss_pred hhhhhhhc-CCCcEEEEEEeCC-C---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCC
Q 006171 268 GKNFLAKT-GPHKVKVIFFSKT-G---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGV 342 (658)
Q Consensus 268 ~~~Fl~~~-~~~~v~vl~f~~~-~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~ 342 (658)
+++.+... ..+++.+++|... | ....+.+..++..|. .+.|..+... ....++++|+|...|++++|+++.
T Consensus 15 ~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~G~- 90 (113)
T 1ti3_A 15 WKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVD--ELKAVAEEWNVEAMPTFIFLKDGK- 90 (113)
T ss_dssp HHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETT--TCHHHHHHHHCSSTTEEEEEETTE-
T ss_pred HHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEcc--ccHHHHHhCCCCcccEEEEEeCCE-
Confidence 55555542 2356667766432 2 112345555666664 4556665432 347899999999999999997543
Q ss_pred CeeeecCCCChHHHHHHHHhh
Q 006171 343 KPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 343 ~p~~y~g~~~~~~L~~fi~~~ 363 (658)
....+.| .+.+.|.++++..
T Consensus 91 ~~~~~~g-~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 91 LVDKTVG-ADKDGLPTLVAKH 110 (113)
T ss_dssp EEEEEEC-CCTTHHHHHHHHH
T ss_pred EEEEEec-CCHHHHHHHHHHh
Confidence 2223567 5778899888763
No 359
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=95.95 E-value=0.0024 Score=53.42 Aligned_cols=57 Identities=14% Similarity=0.140 Sum_probs=40.0
Q ss_pred EEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchh-hhHHHhhCCCCcccceeeeeEEEEcCCC
Q 006171 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRL-ATHLAERKPIGQIFFRRGLPSLVAFPPG 226 (658)
Q Consensus 156 ~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~-~~~Lc~k~~i~k~f~V~~yPTl~~f~~g 226 (658)
-++.|+++||++|+++.+.+++. .+.+..+|.++++. ...+.+.++ +.++|++. .+|
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~------~i~~~~~di~~~~~~~~~l~~~~~------~~~vP~l~--~~g 64 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK------GAEFNEIDASATPELRAEMQERSG------RNTFPQIF--IGS 64 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT------TCCCEEEESTTSHHHHHHHHHHHT------SSCCCEEE--ETT
T ss_pred cEEEEECCCChhHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHHhC------CCCcCEEE--ECC
Confidence 47789999999999888777653 14677888875432 234666777 77999863 355
No 360
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=95.93 E-value=0.015 Score=49.74 Aligned_cols=96 Identities=14% Similarity=0.141 Sum_probs=59.6
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlf 337 (658)
++.++ +++.+... .+++.++.|. +.| ....+.+..++..|. .+.|..+...+ ....++++|+|.+.||++++
T Consensus 10 l~~~~-~~~~~~~~-~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~-~~~~~~~~~~v~~~Pt~~~~ 85 (111)
T 2pu9_C 10 VNKDT-FWPIVKAA-GDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL-DVIFLKLDCNQ-ENKTLAKELGIRVVPTFKIL 85 (111)
T ss_dssp ECTTT-HHHHHTTC-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSS-TTHHHHHHHCCSBSSEEEEE
T ss_pred echHH-HHHHHHhc-CCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC-CeEEEEEecCc-chHHHHHHcCCCeeeEEEEE
Confidence 45544 45555432 2455566554 322 123455666777765 36777775432 24789999999999999998
Q ss_pred eCCCCCeeeecCCCChHHHHHHHHhh
Q 006171 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 338 k~~~~~p~~y~g~~~~~~L~~fi~~~ 363 (658)
+++. ....+.|. +.+.|.++++..
T Consensus 86 ~~G~-~~~~~~G~-~~~~l~~~l~~~ 109 (111)
T 2pu9_C 86 KENS-VVGEVTGA-KYDKLLEAIQAA 109 (111)
T ss_dssp SSSS-EEEEEESS-CHHHHHHHHHHH
T ss_pred eCCc-EEEEEcCC-CHHHHHHHHHHh
Confidence 7653 22235676 478899888763
No 361
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=95.91 E-value=0.0091 Score=52.72 Aligned_cols=64 Identities=11% Similarity=0.094 Sum_probs=44.5
Q ss_pred hccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHhhccC
Q 006171 303 YWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNKLQ 366 (658)
Q Consensus 303 ~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~~~~~ 366 (658)
+...+.+..+.........++++|+|..+|++++|..++.....+.|..+.+.|.++++...-+
T Consensus 59 ~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 59 FNRHFVNLKMDMEKGEGVELRKKYGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp HHHHSEEEEECSSSTTHHHHHHHTTCCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred HhcCeEEEEEecCCcchHHHHHHcCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHh
Confidence 3334555555433223467999999999999999954444333478988999999999886544
No 362
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=95.89 E-value=0.0046 Score=59.98 Aligned_cols=61 Identities=8% Similarity=0.053 Sum_probs=45.4
Q ss_pred CCCcEEEEEe-ccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeeeE
Q 006171 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPS 219 (658)
Q Consensus 152 ~~~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPT 219 (658)
.+++++|.|| +.||+.|..-.|.+.++.+++ ..+.|..|+++........+++++ +..||.
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~~v~vv~Is~D~~~~~~~~~~~~~------~~~f~~ 138 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-ENTVVLCISSDLPFAQSRFCGAEG------LSNVIT 138 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-TTEEEEEEESSCHHHHTTCTTTTT------CTTEEE
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-CCCEEEEEECCCHHHHHHHHHHcC------CCCceE
Confidence 4678999998 789999999999999999988 335788888875444344555555 445663
No 363
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=95.88 E-value=0.0039 Score=57.73 Aligned_cols=87 Identities=15% Similarity=0.191 Sum_probs=58.1
Q ss_pred cCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc---cce------------------------------e-----eee
Q 006171 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI---ANT------------------------------G-----MVE 192 (658)
Q Consensus 151 ~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~---~~v------------------------------g-----~Vd 192 (658)
.+.+..+|.|..++|++|+++.+.++++.+ +.=. ..+ + .-.
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l~~-v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~~~~~ 90 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKMTD-VTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVGGSI 90 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTCCS-EEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCTTCCC
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhcCc-eEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCCccHH
Confidence 357889999999999999999988776411 0000 000 0 011
Q ss_pred ccc-chhhhHHHhhCCCCcccceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 193 LGD-IRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 193 c~e-~~~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|.. -.....+++++| |+|.||+++ .+|. .+.|..+.+.|.+.+.+.
T Consensus 91 ~~~~v~~~~~la~~~g------I~gtPt~vi-~nG~-------~i~G~~~~~~l~~~i~~~ 137 (147)
T 3gv1_A 91 CDNPVAETTSLGEQFG------FNGTPTLVF-PNGR-------TQSGYSPMPQLEEIIRKN 137 (147)
T ss_dssp CSCSHHHHHHHHHHTT------CCSSCEEEC-TTSC-------EEESCCCTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhC------CCccCEEEE-ECCE-------EeeCCCCHHHHHHHHHHH
Confidence 221 112344778888 899999997 5552 358999999999998776
No 364
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=95.85 E-value=0.0045 Score=62.49 Aligned_cols=89 Identities=9% Similarity=-0.064 Sum_probs=61.2
Q ss_pred cEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchh------------------------hhHHHhhCCCC
Q 006171 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL------------------------ATHLAERKPIG 209 (658)
Q Consensus 155 ~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~------------------------~~~Lc~k~~i~ 209 (658)
++|+.|+++||+.|....|.+.+++++++.. +.|..|+++.... ...+++.|+
T Consensus 36 vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~yg-- 113 (249)
T 3a2v_A 36 FVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLG-- 113 (249)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHHHT--
T ss_pred EEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHHhC--
Confidence 4566789999999999999999999999865 4888888874211 123555555
Q ss_pred ccccee-------eeeEEEEcCCCCCCCCCcccccC----CCCHhHHHHHHHHh
Q 006171 210 QIFFRR-------GLPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (658)
Q Consensus 210 k~f~V~-------~yPTl~~f~~g~~~~~~~~~Y~G----~rs~~~Lv~fv~k~ 252 (658)
|. .+|+++++-+.+. ....+.| .|+.+.|...+...
T Consensus 114 ----v~~~~~g~~~~p~~fIID~dG~---I~~~~~~~~~~gr~~~Ellr~I~al 160 (249)
T 3a2v_A 114 ----LLHAESATHTVRGVFIVDARGV---IRTMLYYPMELGRLVDEILRIVKAL 160 (249)
T ss_dssp ----CCCTTCSSSCCEEEEEECTTSB---EEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred ----CccccCCCcccceEEEECCCCe---EEEEEecCCcccchhHHHHHHHHHH
Confidence 65 8999888854433 1122223 36788888877553
No 365
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=95.84 E-value=0.0021 Score=60.38 Aligned_cols=57 Identities=11% Similarity=0.154 Sum_probs=45.5
Q ss_pred cCCCcEEEEEe-ccCCCCCCCChHHHHHHHHHhhccc-ceeeeecccchhhhHHHhhCC
Q 006171 151 HDSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIA-NTGMVELGDIRLATHLAERKP 207 (658)
Q Consensus 151 ~~~~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~~-~vg~Vdc~e~~~~~~Lc~k~~ 207 (658)
..++++++.|| +.||++|..-.|.+.++.++++... .+..|+.+........+++++
T Consensus 31 ~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~ 89 (164)
T 4gqc_A 31 KRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENR 89 (164)
T ss_dssp HTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTT
T ss_pred cCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcC
Confidence 35788888998 9999999999999999988887664 777888875545556777776
No 366
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=95.83 E-value=0.0084 Score=53.89 Aligned_cols=69 Identities=20% Similarity=0.199 Sum_probs=51.0
Q ss_pred cHHHHHHHHhhccCceEEEEEecc-------cccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHhhc
Q 006171 293 SPFVRQISRNYWAYASFAFVLWRE-------EESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (658)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~-------~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~~~ 364 (658)
.|.+..++..|. +.|+.+...+ .....++++|+|.+.||+++|+++. ....+.|..+.+.+.++++...
T Consensus 50 ~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~~~~~G~-~v~~~~G~~~~~~~~~~i~~~~ 125 (135)
T 3emx_A 50 WPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNKAGVEGTPTLVFYKEGR-IVDKLVGATPWSLKVEKAREIY 125 (135)
T ss_dssp HHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHHHTCCSSSEEEEEETTE-EEEEEESCCCHHHHHHHHHHHC
T ss_pred ChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHHcCCceeCeEEEEcCCE-EEEEEeCCCCHHHHHHHHHHHh
Confidence 466666777664 7788887622 2246799999999999999999543 3334789989999999988743
No 367
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=95.82 E-value=0.0098 Score=54.73 Aligned_cols=93 Identities=14% Similarity=0.193 Sum_probs=61.5
Q ss_pred hhhhhhhcCCCcEEEEEEe-CC---CCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCC
Q 006171 268 GKNFLAKTGPHKVKVIFFS-KT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (658)
Q Consensus 268 ~~~Fl~~~~~~~v~vl~f~-~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~ 343 (658)
++..+.. ..+++.+|.|. +- |....|.+..++..|.+.+.|+.|... +...++++|+|.+.||+++|+++...
T Consensus 14 ~~~~i~~-~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d--~~~~l~~~~~v~~~Pt~~~~~~G~~v 90 (149)
T 3gix_A 14 VDQAIKS-TAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVD--QTAVYTQYFDISYIPSTVFFFNGQHM 90 (149)
T ss_dssp HHHHHHH-CCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETT--TCCHHHHHTTCCSSSEEEEEETTEEE
T ss_pred HHHHHHh-cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECC--cCHHHHHHcCCCccCeEEEEECCeEE
Confidence 4444432 23456666553 22 222456667788888766777777643 24689999999999999999876422
Q ss_pred e--------eeecC-CCChHHHHHHHHhh
Q 006171 344 P--------VVYYG-SFNNSRLSEVMEQN 363 (658)
Q Consensus 344 p--------~~y~g-~~~~~~L~~fi~~~ 363 (658)
. ..+.| ..+.+.|.++++..
T Consensus 91 ~~~~g~~~~~~~~G~~~~~~~l~~~l~~~ 119 (149)
T 3gix_A 91 KVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119 (149)
T ss_dssp EEECSSSCCSCEESCCSSHHHHHHHHHHH
T ss_pred EeecCCCCCCeEeeecCCHHHHHHHHHHH
Confidence 0 23567 67888899888763
No 368
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=95.80 E-value=0.0022 Score=59.70 Aligned_cols=55 Identities=13% Similarity=0.030 Sum_probs=43.3
Q ss_pred CCCcEEEEEec-cCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCC
Q 006171 152 DSKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKP 207 (658)
Q Consensus 152 ~~~~~lV~FYa-pwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~ 207 (658)
.+++++|.||+ .||++|..-.|.+.++.+++ ..+.|..|+++........+++++
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~~~~~~~~~~~~ 96 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLPFAQKRWCGAEG 96 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHHT
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCHHHHHHHHHhcC
Confidence 35789999995 99999999999999998888 445788888875444455677776
No 369
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=95.77 E-value=0.0013 Score=63.26 Aligned_cols=42 Identities=17% Similarity=0.172 Sum_probs=35.4
Q ss_pred CCcEEEEEeccCCCCCCCChHHH---HHHHHHhhcccceeeeecc
Q 006171 153 SKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELG 194 (658)
Q Consensus 153 ~~~~lV~FYapwC~~Ck~l~P~w---~~~A~~l~g~~~vg~Vdc~ 194 (658)
..+.+|+||+.||+||+++.|.+ +++++.+.+.+++..++..
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 58 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHVS 58 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEECS
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEech
Confidence 46899999999999999999986 6787777666777777766
No 370
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=95.76 E-value=0.0053 Score=57.78 Aligned_cols=56 Identities=9% Similarity=-0.006 Sum_probs=44.0
Q ss_pred CCCcEEEEEe-ccCCCCCCC-ChHHHHHHHHHhhcc-c-ceeeeecccchhhhHHHhhCC
Q 006171 152 DSKPWLIQVY-SDGSYLCGQ-FSGAWKTIAALLEGI-A-NTGMVELGDIRLATHLAERKP 207 (658)
Q Consensus 152 ~~~~~lV~FY-apwC~~Ck~-l~P~w~~~A~~l~g~-~-~vg~Vdc~e~~~~~~Lc~k~~ 207 (658)
.+++++|.|| +.||+.|.. -.|.+.++.++++.. + .|..|+.+........+++++
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~ 89 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHG 89 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcC
Confidence 3567888887 999999998 899999999988653 5 788888775444556778876
No 371
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=95.72 E-value=0.05 Score=48.52 Aligned_cols=65 Identities=12% Similarity=0.170 Sum_probs=46.0
Q ss_pred HHHHHhhccCceEEEEEecc--cccHhHHhhcCCCCCCEEEEEeCCCCCe--eeecCCCChHHHHHHHHh
Q 006171 297 RQISRNYWAYASFAFVLWRE--EESSIWWNTFEVESAPAIVFLKDPGVKP--VVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 297 ~~~A~~~~~~~~f~~v~~~~--~~s~~l~~~f~V~~~Ptlvlfk~~~~~p--~~y~g~~~~~~L~~fi~~ 362 (658)
..++..+. .+.+..+.... .....++++|+|.+.|++++|..++... ..+.|..+.+.|.++++.
T Consensus 57 ~~l~~~~~-~~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~ 125 (134)
T 2fwh_A 57 PQVQKALA-DTVLLQANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRD 125 (134)
T ss_dssp HHHHHHTT-TSEEEEEECTTCCHHHHHHHHHTTCCSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHH
T ss_pred HHHHHHhc-CcEEEEEeCCCCcchHHHHHHHcCCCCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHh
Confidence 34555554 36777776533 2246799999999999999994333332 357899999999999876
No 372
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=95.69 E-value=0.014 Score=51.37 Aligned_cols=94 Identities=12% Similarity=0.072 Sum_probs=60.4
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEeC-CC---CCCcHHHHHHHHhhccCceEEEEEecccc--cHhHHhhcCCCC-CCEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFSK-TG---ERASPFVRQISRNYWAYASFAFVLWREEE--SSIWWNTFEVES-APAI 334 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~~-~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~--s~~l~~~f~V~~-~Ptl 334 (658)
+++.+.++++++. +++.+++|.. .| ....+.+...+.. +.+.|.++.+.+.. +..++.+|||.+ -|++
T Consensus 11 i~s~e~f~~ii~~---~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~ 85 (112)
T 3iv4_A 11 LSSIDQFEQVIEE---NKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSDYIAKKTNVKHESPQA 85 (112)
T ss_dssp CCSHHHHHHHHHH---CSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHHHHHHHHTCCCCSSEE
T ss_pred cCCHHHHHHHHhc---CCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhHHHHHHhCCccCCCeE
Confidence 4444446667654 4577777754 22 1123444445543 57889999875531 245899999995 8999
Q ss_pred EEEeCCCCCeeeecCCCChHHHHHHH
Q 006171 335 VFLKDPGVKPVVYYGSFNNSRLSEVM 360 (658)
Q Consensus 335 vlfk~~~~~p~~y~g~~~~~~L~~fi 360 (658)
++|++|...-...++.++...|.+.+
T Consensus 86 il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 86 FYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp EEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred EEEECCEEEEEeeccccCHHHHHHhh
Confidence 99998754333357888888877654
No 373
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=95.68 E-value=0.0089 Score=51.32 Aligned_cols=76 Identities=7% Similarity=0.062 Sum_probs=47.2
Q ss_pred CCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeeccc--chh----hhHHHhhCCCCcccceeeeeEEEEcCCC
Q 006171 153 SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGD--IRL----ATHLAERKPIGQIFFRRGLPSLVAFPPG 226 (658)
Q Consensus 153 ~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e--~~~----~~~Lc~k~~i~k~f~V~~yPTl~~f~~g 226 (658)
...-++.|+++||++|+++.+.+++.. +.+-.+|.+. ... ...|.+..+ +.++|+|++ +|
T Consensus 20 ~~~~v~ly~~~~Cp~C~~ak~~L~~~~------i~y~~vdI~~~~~~~~~~~~~~l~~~~g------~~~vP~l~i--~~ 85 (103)
T 3nzn_A 20 DRGKVIMYGLSTCVWCKKTKKLLTDLG------VDFDYVYVDRLEGKEEEEAVEEVRRFNP------SVSFPTTII--ND 85 (103)
T ss_dssp CCSCEEEEECSSCHHHHHHHHHHHHHT------BCEEEEEGGGCCHHHHHHHHHHHHHHCT------TCCSCEEEE--TT
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcC------CCcEEEEeeccCcccHHHHHHHHHHhCC------CCccCEEEE--CC
Confidence 344577799999999999998887653 2344455542 111 111233456 779999876 23
Q ss_pred CCCCCCcccccCCCCHhHHHHHH
Q 006171 227 CKSSDCMTRFEGELSVDAVTDWF 249 (658)
Q Consensus 227 ~~~~~~~~~Y~G~rs~~~Lv~fv 249 (658)
. .+-|..+.+.|.+++
T Consensus 86 ~-------~~igg~~~~~l~~~L 101 (103)
T 3nzn_A 86 E-------KAIVGFKEKEIRESL 101 (103)
T ss_dssp T-------EEEESCCHHHHHHHT
T ss_pred C-------EEEEcCCHHHHHHHh
Confidence 1 235667777777654
No 374
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=95.65 E-value=0.0061 Score=53.10 Aligned_cols=80 Identities=14% Similarity=0.207 Sum_probs=51.1
Q ss_pred cEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEeccc----ccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCC
Q 006171 279 KVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREE----ESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS 350 (658)
Q Consensus 279 ~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~----~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~ 350 (658)
++.+++|. +.| ....|.+..++..+... +.++..... ....++++|+|.+.||+++|+++. ....+.|.
T Consensus 30 ~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~--v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~~~~~~G~-~~~~~~G~ 106 (118)
T 1zma_A 30 ETATFFIGRKTCPYCRKFAGTLSGVVAETKAH--IYFINSEEPSQLNDLQAFRSRYGIPTVPGFVHITDGQ-INVRCDSS 106 (118)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHHCCC--CEEEETTCGGGHHHHHHHHHHHTCCSSCEEEEEETTE-EEEECCTT
T ss_pred CeEEEEEECCCCccHHHHHHHHHHHHHhcCCe--EEEEECCCcCcHHHHHHHHHHcCCCCCCeEEEEECCE-EEEEecCC
Confidence 45556554 322 22345566676666433 444433222 124788999999999999998653 33347888
Q ss_pred CChHHHHHHHH
Q 006171 351 FNNSRLSEVME 361 (658)
Q Consensus 351 ~~~~~L~~fi~ 361 (658)
.+.+.|.+|++
T Consensus 107 ~~~~~l~~~l~ 117 (118)
T 1zma_A 107 MSAQEIKDFAG 117 (118)
T ss_dssp CCHHHHHHHHT
T ss_pred CCHHHHHHHhh
Confidence 89999999885
No 375
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=95.64 E-value=0.025 Score=49.44 Aligned_cols=96 Identities=14% Similarity=0.127 Sum_probs=59.6
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlf 337 (658)
++.++ ++..+... .+++.++.|. +.| ....|.+..++..|. .+.|..+...+ +...++++|+|.+.||++++
T Consensus 23 l~~~~-~~~~~~~~-~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~~~~~~vd~~~-~~~~~~~~~~v~~~Pt~~~~ 98 (124)
T 1faa_A 23 VNKDT-FWPIVKAA-GDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL-DVIFLKLDCNQ-ENKTLAKELGIRVVPTFKIL 98 (124)
T ss_dssp ECTTT-HHHHHHHT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSS-TTHHHHHHHCCSSSSEEEEE
T ss_pred ecchh-HHHHHHhc-CCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC-CCEEEEEecCc-chHHHHHHcCCCeeeEEEEE
Confidence 45544 44455432 3455566554 322 123455666777765 46677765432 24779999999999999999
Q ss_pred eCCCCCeeeecCCCChHHHHHHHHhh
Q 006171 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 338 k~~~~~p~~y~g~~~~~~L~~fi~~~ 363 (658)
+++. ....+.|.. .+.|.++++..
T Consensus 99 ~~G~-~~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 99 KENS-VVGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp ETTE-EEEEEESSC-HHHHHHHHHHH
T ss_pred eCCc-EEEEEcCCC-HHHHHHHHHHh
Confidence 8653 222356764 78899988763
No 376
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=95.61 E-value=0.0057 Score=58.67 Aligned_cols=55 Identities=13% Similarity=0.106 Sum_probs=42.3
Q ss_pred CCc-EEEEEeccCCCCCCC-ChHHHHHHHHHhhccc-c-eeeeecccchhhhHHHhhCC
Q 006171 153 SKP-WLIQVYSDGSYLCGQ-FSGAWKTIAALLEGIA-N-TGMVELGDIRLATHLAERKP 207 (658)
Q Consensus 153 ~~~-~lV~FYapwC~~Ck~-l~P~w~~~A~~l~g~~-~-vg~Vdc~e~~~~~~Lc~k~~ 207 (658)
+++ +|+.|++.||+.|.. -.|.+.+++++++..+ . |..|+.++.......+++++
T Consensus 56 Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~ 114 (184)
T 3uma_A 56 GKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSG 114 (184)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHT
T ss_pred CCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhC
Confidence 444 455556999999999 5999999999997654 6 88999886545556777776
No 377
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=95.58 E-value=0.024 Score=51.02 Aligned_cols=95 Identities=11% Similarity=0.111 Sum_probs=58.2
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEeC-C---CCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFSK-T---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~~-~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlf 337 (658)
++.++ +.+.+.....+++.+|.|.. - |....|.+..++..|. .+.|+.|...+. .++|+|...||+++|
T Consensus 15 i~~~~-~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd~~~~-----~~~~~i~~~Pt~~~~ 87 (135)
T 2dbc_A 15 ISGNQ-YVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAIVNSC-----IEHYHDNCLPTIFVY 87 (135)
T ss_dssp CCHHH-HHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEECCSSS-----CSSCCSSCCSEEEEE
T ss_pred cCHHH-HHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEEhhcC-----cccCCCCCCCEEEEE
Confidence 44333 44444433334566776643 2 2224566677777763 466766654332 278999999999999
Q ss_pred eCCCCCeeeecCC-------CChHHHHHHHHhhc
Q 006171 338 KDPGVKPVVYYGS-------FNNSRLSEVMEQNK 364 (658)
Q Consensus 338 k~~~~~p~~y~g~-------~~~~~L~~fi~~~~ 364 (658)
+++... ..+.|. ++.+.|.+++..+.
T Consensus 88 ~~G~~v-~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 88 KNGQIE-GKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp SSSSCS-EEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred ECCEEE-EEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 865432 234554 36788999998864
No 378
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=95.52 E-value=0.014 Score=52.43 Aligned_cols=96 Identities=10% Similarity=0.151 Sum_probs=56.6
Q ss_pred eccchhhhhhhhhcCCCcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEE
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlf 337 (658)
+++.+.++..+... .+++.+|.|. +-| ....+.+..++..| .+.|..+.. .+...++++|+|.+.||+++|
T Consensus 25 l~~~~~~~~~l~~~-~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~--~~~~~l~~~~~v~~~Pt~~~~ 99 (133)
T 3cxg_A 25 LKNTGSLNQVFSST-QNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDV--DIHPKLNDQHNIKALPTFEFY 99 (133)
T ss_dssp CCCTTHHHHHHTC--CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEET--TTCHHHHHHTTCCSSSEEEEE
T ss_pred ecChhHHHHHHHhc-CCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEec--cchHHHHHhcCCCCCCEEEEE
Confidence 44433355555433 2456666554 322 12344454455444 345555543 234789999999999999999
Q ss_pred e--CCCC-CeeeecCCCChHHHHHHHHhh
Q 006171 338 K--DPGV-KPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 338 k--~~~~-~p~~y~g~~~~~~L~~fi~~~ 363 (658)
+ ++.. ....+.|. +.+.|.++++..
T Consensus 100 ~~~~g~g~~~~~~~G~-~~~~l~~~l~~~ 127 (133)
T 3cxg_A 100 FNLNNEWVLVHTVEGA-NQNDIEKAFQKY 127 (133)
T ss_dssp EEETTEEEEEEEEESC-CHHHHHHHHHHH
T ss_pred EecCCCeEEEEEEcCC-CHHHHHHHHHHH
Confidence 7 5431 22235676 788899998764
No 379
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=95.52 E-value=0.015 Score=50.14 Aligned_cols=91 Identities=19% Similarity=0.165 Sum_probs=57.2
Q ss_pred hhhhhhhc-CCCcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCC
Q 006171 268 GKNFLAKT-GPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGV 342 (658)
Q Consensus 268 ~~~Fl~~~-~~~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~ 342 (658)
+++.+... ..+++.+++|. +.| ....+.+..++..|. .+.|..+... ....++++|+|...|++++|+++.
T Consensus 17 ~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~g~- 92 (118)
T 2vm1_A 17 FDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVD--ELKDVAEAYNVEAMPTFLFIKDGE- 92 (118)
T ss_dssp HHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETT--TSHHHHHHTTCCSBSEEEEEETTE-
T ss_pred HHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcc--cCHHHHHHcCCCcCcEEEEEeCCe-
Confidence 55555431 12345566554 322 123455666777664 5667776543 247899999999999999997653
Q ss_pred CeeeecCCCChHHHHHHHHhh
Q 006171 343 KPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 343 ~p~~y~g~~~~~~L~~fi~~~ 363 (658)
....+.| .+.+.|.++++..
T Consensus 93 ~~~~~~g-~~~~~l~~~l~~~ 112 (118)
T 2vm1_A 93 KVDSVVG-GRKDDIHTKIVAL 112 (118)
T ss_dssp EEEEEES-CCHHHHHHHHHHH
T ss_pred EEEEecC-CCHHHHHHHHHHH
Confidence 2223567 5788899998764
No 380
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=94.48 E-value=0.0023 Score=53.83 Aligned_cols=82 Identities=15% Similarity=0.203 Sum_probs=54.3
Q ss_pred CcEEEEEEe-C---CCCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCCh
Q 006171 278 HKVKVIFFS-K---TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (658)
Q Consensus 278 ~~v~vl~f~-~---~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~ 353 (658)
+++.+++|. + .|....+.+..++..+.+.+.|..+... ....++++|+|...|++++|+++. ....+.|..+.
T Consensus 19 ~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~g~-~~~~~~g~~~~ 95 (106)
T 2yj7_A 19 DKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVD--ENPNTAAQYGIRSIPTLLLFKNGQ-VVDRLVGAQPK 95 (106)
Confidence 345566553 2 2333456666677776655666666432 246799999999999999996543 33346788778
Q ss_pred HHHHHHHHh
Q 006171 354 SRLSEVMEQ 362 (658)
Q Consensus 354 ~~L~~fi~~ 362 (658)
+.|.+++++
T Consensus 96 ~~l~~~l~~ 104 (106)
T 2yj7_A 96 EALKERIDK 104 (106)
Confidence 888888765
No 381
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=95.45 E-value=0.0038 Score=59.82 Aligned_cols=40 Identities=13% Similarity=0.217 Sum_probs=34.5
Q ss_pred CCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecc
Q 006171 153 SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG 194 (658)
Q Consensus 153 ~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~ 194 (658)
+++.+|+|++.||+||+++.|.++++.+.+ + +.+..++..
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~-~-v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA-G-TDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH-T-SCCEEEECC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh-C-CeEEEEecc
Confidence 678999999999999999999999999988 3 466666654
No 382
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=95.45 E-value=0.009 Score=56.68 Aligned_cols=55 Identities=9% Similarity=0.038 Sum_probs=40.8
Q ss_pred CCcEEEEEe-ccCCCCCC-CChHHHHHHHHHhhccc-c-eeeeecccchhhhHHHhhCC
Q 006171 153 SKPWLIQVY-SDGSYLCG-QFSGAWKTIAALLEGIA-N-TGMVELGDIRLATHLAERKP 207 (658)
Q Consensus 153 ~~~~lV~FY-apwC~~Ck-~l~P~w~~~A~~l~g~~-~-vg~Vdc~e~~~~~~Lc~k~~ 207 (658)
++++++.|| +.||+.|. .-.|.+.+++++++..+ . ||.|.++........+++.+
T Consensus 43 gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~ 101 (173)
T 3mng_A 43 GKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHK 101 (173)
T ss_dssp TSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTT
T ss_pred CCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhC
Confidence 455555555 99999999 57899999999997654 4 44588875545566788877
No 383
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=95.42 E-value=0.014 Score=51.23 Aligned_cols=92 Identities=20% Similarity=0.208 Sum_probs=60.1
Q ss_pred hhhhhhhc-CCCcEEEEEEeC----CCCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCC
Q 006171 268 GKNFLAKT-GPHKVKVIFFSK----TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGV 342 (658)
Q Consensus 268 ~~~Fl~~~-~~~~v~vl~f~~----~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~ 342 (658)
++..+... ..+++.+++|.. .|....+.+..++..|. .+.|..+... ....++++|+|...||+++|+++..
T Consensus 25 ~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~g~~ 101 (130)
T 1wmj_A 25 FDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVD--ELKEVAEKYNVEAMPTFLFIKDGAE 101 (130)
T ss_dssp HHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTT--TSGGGHHHHTCCSSCCCCBCTTTTC
T ss_pred HHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEecc--chHHHHHHcCCCccceEEEEeCCeE
Confidence 45555432 234565666632 34456777887887775 4666666432 2467999999999999999976532
Q ss_pred CeeeecCCCChHHHHHHHHhhc
Q 006171 343 KPVVYYGSFNNSRLSEVMEQNK 364 (658)
Q Consensus 343 ~p~~y~g~~~~~~L~~fi~~~~ 364 (658)
...+.| .+.+.|.++++...
T Consensus 102 -~~~~~g-~~~~~l~~~l~~~~ 121 (130)
T 1wmj_A 102 -ADKVVG-ARKDDLQNTIVKHV 121 (130)
T ss_dssp -CBCCCT-TCTTTHHHHHHHHT
T ss_pred -EEEEeC-CCHHHHHHHHHHHH
Confidence 233567 57788999988743
No 384
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=95.41 E-value=0.015 Score=57.34 Aligned_cols=92 Identities=8% Similarity=0.042 Sum_probs=59.5
Q ss_pred hhhhhhhcCCCcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCC
Q 006171 268 GKNFLAKTGPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (658)
Q Consensus 268 ~~~Fl~~~~~~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~ 343 (658)
+...+.....++++||.|. +.| ....|.+..+|..|. .+.|+.|... ...++.+|+|..+||+++|+++. .
T Consensus 110 f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~---~~~l~~~~~i~~~PTl~~~~~G~-~ 184 (217)
T 2trc_P 110 FLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS---NTGAGDRFSSDVLPTLLVYKGGE-L 184 (217)
T ss_dssp HHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH---HHTCSTTSCGGGCSEEEEEETTE-E
T ss_pred HHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC---cHHHHHHCCCCCCCEEEEEECCE-E
Confidence 4455543333456666553 322 223566777888773 6778887643 45688999999999999998653 2
Q ss_pred eeeecCCCC-------hHHHHHHHHhhc
Q 006171 344 PVVYYGSFN-------NSRLSEVMEQNK 364 (658)
Q Consensus 344 p~~y~g~~~-------~~~L~~fi~~~~ 364 (658)
...+.|..+ .+.|..|+..+.
T Consensus 185 v~~~~G~~~~~g~~~~~~~Le~~L~~~g 212 (217)
T 2trc_P 185 ISNFISVAEQFAEDFFAADVESFLNEYG 212 (217)
T ss_dssp EEEETTGGGGSCSSCCHHHHHHHHHTTT
T ss_pred EEEEeCCcccCcccCCHHHHHHHHHHcC
Confidence 233555443 488999998764
No 385
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=95.34 E-value=0.021 Score=50.28 Aligned_cols=92 Identities=14% Similarity=0.192 Sum_probs=56.4
Q ss_pred hhhhhhhcCCCcEEEEEEeCC--------C---CCCcHHHHHHHHhhccCceEEEEEecc-----cccHhHHhhcCCCCC
Q 006171 268 GKNFLAKTGPHKVKVIFFSKT--------G---ERASPFVRQISRNYWAYASFAFVLWRE-----EESSIWWNTFEVESA 331 (658)
Q Consensus 268 ~~~Fl~~~~~~~v~vl~f~~~--------~---~~~~~~~~~~A~~~~~~~~f~~v~~~~-----~~s~~l~~~f~V~~~ 331 (658)
++..+... .+++.++.|... | ....|.+..++..+.+.+.|..+...+ .....++++|+|.+.
T Consensus 15 ~~~~~~~~-~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~~~~i~~~ 93 (123)
T 1wou_A 15 FHRAVEQH-NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRKNLKVTAV 93 (123)
T ss_dssp HHHHHHTT-TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHHHHCCCSS
T ss_pred HHHHHHHh-CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHHHCCCCee
Confidence 44444432 245666666432 2 112455666777776667777776531 224679999999999
Q ss_pred CEEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 332 PAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 332 Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
||+++|+++ .....+.| .+.+.|.+|+++
T Consensus 94 Pt~~~~~~~-~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 94 PTLLKYGTP-QKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp SEEEETTSS-CEEEGGGG-GCHHHHHHHHHC
T ss_pred CEEEEEcCC-ceEecccc-CCHHHHHHHHhc
Confidence 999999862 22221233 467788888864
No 386
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=95.32 E-value=0.016 Score=51.53 Aligned_cols=85 Identities=11% Similarity=0.122 Sum_probs=54.5
Q ss_pred CcEEEEEEeC-CC---CCCcHHHH--HHHHhhccCceEEEEEecc-cccHhHHhhcCC---CCCCEEEEEeCCCCCeeee
Q 006171 278 HKVKVIFFSK-TG---ERASPFVR--QISRNYWAYASFAFVLWRE-EESSIWWNTFEV---ESAPAIVFLKDPGVKPVVY 347 (658)
Q Consensus 278 ~~v~vl~f~~-~~---~~~~~~~~--~~A~~~~~~~~f~~v~~~~-~~s~~l~~~f~V---~~~Ptlvlfk~~~~~p~~y 347 (658)
+++.+|.|.. -| ....+.+. .++..+.+.+.+..|...+ .....++++|+| .+.||+++|..++.....+
T Consensus 29 ~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~ 108 (133)
T 3fk8_A 29 HKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVRYTT 108 (133)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEEEEC
T ss_pred CCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEEEEe
Confidence 4566666643 22 12345555 5666665667777776532 234789999999 9999999994444333334
Q ss_pred cC-------CCChHHHHHHHHh
Q 006171 348 YG-------SFNNSRLSEVMEQ 362 (658)
Q Consensus 348 ~g-------~~~~~~L~~fi~~ 362 (658)
.| .++.+.+.+|++.
T Consensus 109 ~g~~~~~~~~~~~~~l~~~l~~ 130 (133)
T 3fk8_A 109 KGGELANARKMSDQGIYDFFAK 130 (133)
T ss_dssp CSCTTTTGGGSCHHHHHHHHHH
T ss_pred cCCcccccccCCHHHHHHHHHH
Confidence 55 4677888888875
No 387
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=95.30 E-value=0.017 Score=52.56 Aligned_cols=83 Identities=13% Similarity=0.158 Sum_probs=54.6
Q ss_pred CcEEEEEEe-CC---CCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCee--------
Q 006171 278 HKVKVIFFS-KT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPV-------- 345 (658)
Q Consensus 278 ~~v~vl~f~-~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~-------- 345 (658)
+++.+|.|. +- |....|.+..++..+.+.+.|+.|...+ ..+++++|+|.+.||+++|+++.....
T Consensus 23 ~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~--~~~~~~~~~i~~~Pt~~~~~~G~~v~~~~g~~~~~ 100 (142)
T 1qgv_A 23 DRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITE--VPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNN 100 (142)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTT--CCTTTTSSCSCSSCEEEEEETTEEEEEECC-----
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEcccc--CHHHHHHcCCCCCCEEEEEECCcEEEEecCCCCcc
Confidence 456666554 22 2224566777888886677777776443 467999999999999999987643221
Q ss_pred eecCCCC-hHHHHHHHHh
Q 006171 346 VYYGSFN-NSRLSEVMEQ 362 (658)
Q Consensus 346 ~y~g~~~-~~~L~~fi~~ 362 (658)
...|.++ .+.|.++++.
T Consensus 101 ~~~g~~~~~~~l~~~i~~ 118 (142)
T 1qgv_A 101 KINWAMEDKQEMVDIIET 118 (142)
T ss_dssp -CCSCCSCHHHHHHHHHH
T ss_pred eeeeecCcHHHHHHHHHH
Confidence 1234443 6778888776
No 388
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=95.22 E-value=0.015 Score=52.01 Aligned_cols=82 Identities=22% Similarity=0.317 Sum_probs=54.3
Q ss_pred CcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCCh
Q 006171 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (658)
Q Consensus 278 ~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~ 353 (658)
+++.+|.|. +.| ....+.+..++..|. .+.|..|... +...++++|+|.+.||+++++++. ....+.|. +.
T Consensus 46 ~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~G~-~~~~~~G~-~~ 120 (139)
T 3d22_A 46 GKIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVD--ELSDFSASWEIKATPTFFFLRDGQ-QVDKLVGA-NK 120 (139)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETT--TSHHHHHHTTCCEESEEEEEETTE-EEEEEESC-CH
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCc--ccHHHHHHcCCCcccEEEEEcCCe-EEEEEeCC-CH
Confidence 345556554 322 123455666777663 5667776543 247899999999999999997553 22336777 78
Q ss_pred HHHHHHHHhhc
Q 006171 354 SRLSEVMEQNK 364 (658)
Q Consensus 354 ~~L~~fi~~~~ 364 (658)
+.|.++++...
T Consensus 121 ~~l~~~l~~~~ 131 (139)
T 3d22_A 121 PELHKKITAIL 131 (139)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 88999988754
No 389
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=95.20 E-value=0.0054 Score=57.18 Aligned_cols=61 Identities=16% Similarity=0.048 Sum_probs=45.7
Q ss_pred CCCcEEEEEe-ccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeeeEE
Q 006171 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSL 220 (658)
Q Consensus 152 ~~~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl 220 (658)
.+++++|.|| +.||++|..-.|.+.++.++ + .+.|..|+++........+++++ +..||.+
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~-~~~vv~is~d~~~~~~~~~~~~~------~~~~~~l 106 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK-E-EGIVLTISADLPFAQKRWCASAG------LDNVITL 106 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-T-TSEEEEEESSCHHHHHHHHHHHT------CSSCEEE
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc-C-CCEEEEEECCCHHHHHHHHHHcC------CCceEEc
Confidence 3578899998 78999999999999888776 3 34777888875555566777777 5456644
No 390
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=95.18 E-value=0.0072 Score=52.70 Aligned_cols=56 Identities=16% Similarity=0.269 Sum_probs=37.1
Q ss_pred EEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccc----hh-hhHHHhhCCCCcccceeeeeEEEEcCCC
Q 006171 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI----RL-ATHLAERKPIGQIFFRRGLPSLVAFPPG 226 (658)
Q Consensus 157 lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~----~~-~~~Lc~k~~i~k~f~V~~yPTl~~f~~g 226 (658)
++.|+++||++|++..+.+++.. +.+..+|.+.. .. ...|.+..| +..+|+| |.+|
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~~------i~~~~~di~~~~~~~~~~~~~l~~~~g------~~tvP~i--fi~g 81 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRLG------VQPLVVELDQLGPQGPQLQKVLERLTG------QHTVPNV--FVCG 81 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTT------CCCEEEEGGGSTTHHHHHHHHHHHHHS------CCSSCEE--EETT
T ss_pred EEEEECCCChhHHHHHHHHHHcC------CCCeEEEeecCCCChHHHHHHHHHHhC------CCCcCEE--EECC
Confidence 67799999999999888776542 24455666531 12 222555557 7799998 4455
No 391
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=95.16 E-value=0.025 Score=50.06 Aligned_cols=79 Identities=10% Similarity=0.163 Sum_probs=53.4
Q ss_pred cEEEEEEe-CC---CCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecC-----
Q 006171 279 KVKVIFFS-KT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYG----- 349 (658)
Q Consensus 279 ~v~vl~f~-~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g----- 349 (658)
++.++.|. +- |....|.+..+|..|. .+.|..|...+ ...+|+|.+.||+++|+++... ..+.|
T Consensus 24 ~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd~d~-----~~~~~~v~~~PT~~~fk~G~~v-~~~~G~~~~g 96 (118)
T 3evi_A 24 VWVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAIVNS-----CIQHYHDNCLPTIFVYKNGQIE-AKFIGIIECG 96 (118)
T ss_dssp CEEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEEGGG-----TSTTCCGGGCSEEEEEETTEEE-EEEESTTTTT
T ss_pred CeEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEEhHH-----hHHHCCCCCCCEEEEEECCEEE-EEEeChhhhC
Confidence 36666553 32 2234677788888875 57888886443 3589999999999999986422 12333
Q ss_pred --CCChHHHHHHHHhhc
Q 006171 350 --SFNNSRLSEVMEQNK 364 (658)
Q Consensus 350 --~~~~~~L~~fi~~~~ 364 (658)
.++.+.|..++.++.
T Consensus 97 g~~~~~~~le~~L~~~g 113 (118)
T 3evi_A 97 GINLKLEELEWKLAEVG 113 (118)
T ss_dssp CSSCCHHHHHHHHHTTT
T ss_pred CCCCCHHHHHHHHHHcC
Confidence 357888999987653
No 392
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.07 E-value=0.043 Score=52.32 Aligned_cols=96 Identities=19% Similarity=0.180 Sum_probs=63.1
Q ss_pred cCCCcEEEEEeccCCCCCCCChH-HH--HHHHHHhhcccceeeeecccchh------------hhHHH---hhCCCCccc
Q 006171 151 HDSKPWLIQVYSDGSYLCGQFSG-AW--KTIAALLEGIANTGMVELGDIRL------------ATHLA---ERKPIGQIF 212 (658)
Q Consensus 151 ~~~~~~lV~FYapwC~~Ck~l~P-~w--~~~A~~l~g~~~vg~Vdc~e~~~------------~~~Lc---~k~~i~k~f 212 (658)
...++.+|.+++|||..|..|.. +| +++.+.++....+-..|.+.... -..++ +.++
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~----- 127 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQK----- 127 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSC-----
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcC-----
Confidence 46889999999999999988762 22 33555565555566666653210 01233 3366
Q ss_pred ceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 213 ~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
+.+||++.++..............|..+++++++.+...
T Consensus 128 -~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~ 166 (178)
T 2ec4_A 128 -TDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAA 166 (178)
T ss_dssp -STTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHH
T ss_pred -CCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHH
Confidence 889999999864322112345568999999999887665
No 393
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=94.95 E-value=0.014 Score=50.01 Aligned_cols=61 Identities=15% Similarity=0.084 Sum_probs=42.0
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhh-hHHHhhC-CCCcccceeeeeEEEEcCCC
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERK-PIGQIFFRRGLPSLVAFPPG 226 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~-~~Lc~k~-~i~k~f~V~~yPTl~~f~~g 226 (658)
+...-++.|.+|||++|++..+.+++.. +.+..+|.++++.. ..+.+.. + +.++|+| |.+|
T Consensus 13 ~~~~~v~vy~~~~Cp~C~~ak~~L~~~~------i~y~~idI~~~~~~~~~l~~~~~g------~~~vP~i--fi~g 75 (99)
T 3qmx_A 13 AVSAKIEIYTWSTCPFCMRALALLKRKG------VEFQEYCIDGDNEAREAMAARANG------KRSLPQI--FIDD 75 (99)
T ss_dssp CCCCCEEEEECTTCHHHHHHHHHHHHHT------CCCEEEECTTCHHHHHHHHHHTTT------CCCSCEE--EETT
T ss_pred cCCCCEEEEEcCCChhHHHHHHHHHHCC------CCCEEEEcCCCHHHHHHHHHHhCC------CCCCCEE--EECC
Confidence 3445677899999999999988777652 36777888754332 2344554 6 7799988 3455
No 394
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=94.87 E-value=0.012 Score=51.16 Aligned_cols=67 Identities=7% Similarity=0.052 Sum_probs=43.4
Q ss_pred CCCCccccCCCcEEEEEec-----cCCCCCCCChHHHHHHHHHhhcccceeeeecccchhh-hHHHhhCCCCcccceeee
Q 006171 144 EDFPSIFHDSKPWLIQVYS-----DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRGL 217 (658)
Q Consensus 144 ~nF~~~v~~~~~~lV~FYa-----pwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~-~~Lc~k~~i~k~f~V~~y 217 (658)
+.+++++.+++ ++.|+. +||++|++..+.+++. .+.+..+|.++++.. ..|.+..+ ..++
T Consensus 6 ~~~~~~i~~~~--vvvy~~g~~~~~~Cp~C~~ak~~L~~~------~i~~~~vdi~~~~~~~~~l~~~~g------~~~v 71 (109)
T 1wik_A 6 SGLKVLTNKAS--VMLFMKGNKQEAKCGFSKQILEILNST------GVEYETFDILEDEEVRQGLKTFSN------WPTY 71 (109)
T ss_dssp CCHHHHHTTSS--EEEEESSTTTCCCSSTHHHHHHHHHHT------CSCEEEEESSSCHHHHHHHHHHHS------CCSS
T ss_pred HHHHHHhccCC--EEEEEecCCCCCCCchHHHHHHHHHHc------CCCeEEEECCCCHHHHHHHHHHhC------CCCC
Confidence 34455555544 455777 9999999887776543 247888888855332 23555556 6789
Q ss_pred eEEEEcCCC
Q 006171 218 PSLVAFPPG 226 (658)
Q Consensus 218 PTl~~f~~g 226 (658)
|+| |.+|
T Consensus 72 P~i--fi~g 78 (109)
T 1wik_A 72 PQL--YVRG 78 (109)
T ss_dssp CEE--ECSS
T ss_pred CEE--EECC
Confidence 985 5565
No 395
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=93.82 E-value=0.005 Score=54.56 Aligned_cols=85 Identities=21% Similarity=0.259 Sum_probs=53.3
Q ss_pred CcEEEEEEe-C---CCCCCcHHH---HHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeC-CCCC--eeee
Q 006171 278 HKVKVIFFS-K---TGERASPFV---RQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKD-PGVK--PVVY 347 (658)
Q Consensus 278 ~~v~vl~f~-~---~~~~~~~~~---~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~-~~~~--p~~y 347 (658)
+++.+|.|. + .|....+.+ ..++..+.+.+.+..+.....+...++++|+|.++||+++|.. ++.. ...+
T Consensus 19 ~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~~~~~ 98 (130)
T 2lst_A 19 GRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEEVGRL 98 (130)
Confidence 455566553 2 233344555 5555555555666666543333467999999999999999942 2222 2346
Q ss_pred cCCCChHHHHHHHHh
Q 006171 348 YGSFNNSRLSEVMEQ 362 (658)
Q Consensus 348 ~g~~~~~~L~~fi~~ 362 (658)
.|..+.+.|.++++.
T Consensus 99 ~G~~~~~~l~~~l~~ 113 (130)
T 2lst_A 99 FGSRPRAEFLKELRQ 113 (130)
Confidence 787787888888765
No 396
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=94.67 E-value=0.042 Score=46.53 Aligned_cols=78 Identities=17% Similarity=0.113 Sum_probs=48.0
Q ss_pred EEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeeeEEEEcCCCCCCCCCccc
Q 006171 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTR 235 (658)
Q Consensus 156 ~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~~~~~~ 235 (658)
-++.|..|||++|++.....++. .+.+-.+|.++++.......+...| .+.+|+|++ .+|..
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~------gi~y~~idi~~d~~~~~~~~~~~~G----~~tVP~I~i-~Dg~~------- 66 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN------RIAYDEVDIEHNRAAAEFVGSVNGG----NRTVPTVKF-ADGST------- 66 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHHSSS----SSCSCEEEE-TTSCE-------
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc------CCceEEEEcCCCHHHHHHHHHHcCC----CCEeCEEEE-eCCEE-------
Confidence 46778899999998766444321 2367788888655443333332112 668999764 44431
Q ss_pred ccCCCCHhHHHHHHHHh
Q 006171 236 FEGELSVDAVTDWFATA 252 (658)
Q Consensus 236 Y~G~rs~~~Lv~fv~k~ 252 (658)
-+..+.++|.+++.+.
T Consensus 67 -l~~~~~~el~~~L~el 82 (92)
T 2lqo_A 67 -LTNPSADEVKAKLVKI 82 (92)
T ss_dssp -EESCCHHHHHHHHHHH
T ss_pred -EeCCCHHHHHHHHHHh
Confidence 1234678888887665
No 397
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=94.65 E-value=0.025 Score=49.48 Aligned_cols=85 Identities=19% Similarity=0.166 Sum_probs=53.8
Q ss_pred CcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCC---CCCeeeecCC
Q 006171 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP---GVKPVVYYGS 350 (658)
Q Consensus 278 ~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~---~~~p~~y~g~ 350 (658)
+++.++.|. +.| ....+.+..++..+ ..+.|..+.... ...++++|+|.+.||+++|++. +..-..+.|.
T Consensus 23 ~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~--~~~~~~~~~i~~~Pt~~~~~~~~~~G~~~~~~~G~ 99 (118)
T 2f51_A 23 PGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDK--NGNAADAYGVSSIPALFFVKKEGNEIKTLDQFVGA 99 (118)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTT--CHHHHHHTTCCSSSEEEEEEEETTEEEEEEEEESC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCC--CHHHHHhcCCCCCCEEEEEeCCCCcceEEEeecCC
Confidence 345566554 322 12345556677766 567777776433 4779999999999999999862 2122235676
Q ss_pred CChHHHHHHHHhhccC
Q 006171 351 FNNSRLSEVMEQNKLQ 366 (658)
Q Consensus 351 ~~~~~L~~fi~~~~~~ 366 (658)
. ...|.+.+..+.-+
T Consensus 100 ~-~~~l~~~~~~~~~~ 114 (118)
T 2f51_A 100 D-VSRIKADIEKFKHH 114 (118)
T ss_dssp C-HHHHHHHHHHHC--
T ss_pred C-HHHHHHHHHHhhhc
Confidence 4 55699999887654
No 398
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=94.48 E-value=0.056 Score=54.23 Aligned_cols=93 Identities=10% Similarity=0.095 Sum_probs=58.9
Q ss_pred hhhhhhhcCCCcEEEEEEe-CC---CCCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCC
Q 006171 268 GKNFLAKTGPHKVKVIFFS-KT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (658)
Q Consensus 268 ~~~Fl~~~~~~~v~vl~f~-~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~ 343 (658)
+...+.....++++||.|. +- |....|.+..+|..|. .+.|+.|.... ..++.+|+|..+||+++|+++...
T Consensus 123 f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~-~v~f~kVd~d~---~~l~~~~~I~~~PTll~~~~G~~v 198 (245)
T 1a0r_P 123 FLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYP-MVKFCKIKASN---TGAGDRFSSDVLPTLLVYKGGELL 198 (245)
T ss_dssp HHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT-TSEEEEEEHHH---HCCTTSSCTTTCSEEEEEETTEEE
T ss_pred HHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CCEEEEEeCCc---HHHHHHCCCCCCCEEEEEECCEEE
Confidence 4444433223556666553 32 2224577777888875 47788776432 558899999999999999965321
Q ss_pred eeeecCC-------CChHHHHHHHHhhcc
Q 006171 344 PVVYYGS-------FNNSRLSEVMEQNKL 365 (658)
Q Consensus 344 p~~y~g~-------~~~~~L~~fi~~~~~ 365 (658)
..+.|. ++...|..|+..+..
T Consensus 199 -~~~vG~~~~~g~~~~~e~Le~~L~~~g~ 226 (245)
T 1a0r_P 199 -SNFISVTEQLAEEFFTGDVESFLNEYGL 226 (245)
T ss_dssp -EEETTGGGGSCTTCCHHHHHHHHHTTTC
T ss_pred -EEEeCCcccccccccHHHHHHHHHHcCC
Confidence 123332 456789999988643
No 399
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=94.38 E-value=0.039 Score=54.92 Aligned_cols=96 Identities=5% Similarity=-0.117 Sum_probs=60.5
Q ss_pred CcEEEEEe-ccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchhhhHHHh------hC--CC------------Ccc
Q 006171 154 KPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAE------RK--PI------------GQI 211 (658)
Q Consensus 154 ~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~~~~Lc~------k~--~i------------~k~ 211 (658)
+++++.|| ++||+.|..-.|.+.++.++++.. +.|..|.++........++ ++ ++ .+.
T Consensus 30 ~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va~~ 109 (233)
T 2v2g_A 30 SWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELAVK 109 (233)
T ss_dssp SEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHHHH
T ss_pred CeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHHHH
Confidence 37778888 999999999999999999998764 3777777774322222222 11 11 123
Q ss_pred ccee------------eeeEEEEcCCCCCCCCCcccccC----CCCHhHHHHHHHHh
Q 006171 212 FFRR------------GLPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (658)
Q Consensus 212 f~V~------------~yPTl~~f~~g~~~~~~~~~Y~G----~rs~~~Lv~fv~k~ 252 (658)
|.+. ..|+++++-+.+. ....+.| .|+.++|+..+...
T Consensus 110 ygv~~~~~~~~~g~~~~~p~~fiID~~G~---I~~~~~~~~~~gr~~~eilr~l~~L 163 (233)
T 2v2g_A 110 LGMVDPDERTSTGMPLTCRAVFIIGPDKK---LKLSILYPATTGRNFSEILRVIDSL 163 (233)
T ss_dssp TTCEEEEEECTTCCEEECEEEEEECTTSB---EEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred hCCcCcccccCCCcccccceEEEECCCCE---EEEEEecCCCCCCCHHHHHHHHHHH
Confidence 3353 5788888855443 1122222 46788888887654
No 400
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=94.27 E-value=0.075 Score=46.38 Aligned_cols=67 Identities=22% Similarity=0.338 Sum_probs=47.8
Q ss_pred HHHHHHHHhhccCceEEEEEecc---------------------cccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCC
Q 006171 294 PFVRQISRNYWAYASFAFVLWRE---------------------EESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFN 352 (658)
Q Consensus 294 ~~~~~~A~~~~~~~~f~~v~~~~---------------------~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~ 352 (658)
+.+..++..|. .+.|..|...+ .....+++.|+|...|+++++..++... .+.|..+
T Consensus 45 ~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~~id~~g~i~-~~~g~~~ 122 (136)
T 1zzo_A 45 PVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVD-VVRGRMS 122 (136)
T ss_dssp HHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCSSSEEEEECTTCCEE-EEESCCC
T ss_pred HHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCCCceEEEECCCCCEE-EEecCCC
Confidence 44455666665 56777776432 1135688999999999999997555443 6889889
Q ss_pred hHHHHHHHHh
Q 006171 353 NSRLSEVMEQ 362 (658)
Q Consensus 353 ~~~L~~fi~~ 362 (658)
.+.|.++++.
T Consensus 123 ~~~l~~~l~~ 132 (136)
T 1zzo_A 123 QDELTRRVTA 132 (136)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8999998876
No 401
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=94.24 E-value=0.053 Score=48.05 Aligned_cols=42 Identities=14% Similarity=0.251 Sum_probs=33.6
Q ss_pred cHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHH
Q 006171 319 SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVM 360 (658)
Q Consensus 319 s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi 360 (658)
...+++.|+|...|+++++..++.....+.|..+.+.|.+++
T Consensus 103 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 103 KGELMKEYHIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp SSHHHHHTTCCEESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred chhHHHhcCcCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 347899999999999999965554444578988988888876
No 402
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=94.10 E-value=0.09 Score=46.03 Aligned_cols=67 Identities=19% Similarity=0.362 Sum_probs=47.4
Q ss_pred HHHHHHHHhhccCceEEEEEeccc--------------------ccHhHHhhcCCCCCCEEEEEeCCCCCeeeec---CC
Q 006171 294 PFVRQISRNYWAYASFAFVLWREE--------------------ESSIWWNTFEVESAPAIVFLKDPGVKPVVYY---GS 350 (658)
Q Consensus 294 ~~~~~~A~~~~~~~~f~~v~~~~~--------------------~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~---g~ 350 (658)
+.+..++..|. .+.|..|...+. ....+.+.|++...|+++++..++... .+. |.
T Consensus 44 ~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~-~~~~~~g~ 121 (136)
T 1lu4_A 44 PSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQPAFVFYRADGTST-FVNNPTAA 121 (136)
T ss_dssp HHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSSSEEEEECTTSCEE-EECCSSSC
T ss_pred HHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCCCEEEEECCCCcEE-EEEcCCCc
Confidence 34444666665 566666654331 135688999999999999996555443 577 88
Q ss_pred CChHHHHHHHHh
Q 006171 351 FNNSRLSEVMEQ 362 (658)
Q Consensus 351 ~~~~~L~~fi~~ 362 (658)
.+.+.|.+++++
T Consensus 122 ~~~~~l~~~l~~ 133 (136)
T 1lu4_A 122 MSQDELSGRVAA 133 (136)
T ss_dssp CCHHHHHHHHHH
T ss_pred cCHHHHHHHHHH
Confidence 899999999876
No 403
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=94.02 E-value=0.088 Score=46.77 Aligned_cols=69 Identities=17% Similarity=0.193 Sum_probs=47.2
Q ss_pred HHHHHHHHhhccCceEEEEEecc-------------------------cccHhHHhhcCCCCCCEEEEEeCCCCCeeeec
Q 006171 294 PFVRQISRNYWAYASFAFVLWRE-------------------------EESSIWWNTFEVESAPAIVFLKDPGVKPVVYY 348 (658)
Q Consensus 294 ~~~~~~A~~~~~~~~f~~v~~~~-------------------------~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~ 348 (658)
+.+..++..|.+.+.|..+.... .....+.+.|+|...|+++++..++.....+.
T Consensus 49 ~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 128 (148)
T 2b5x_A 49 PQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQA 128 (148)
T ss_dssp HHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEE
T ss_pred HHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHhCCCCCCEEEEECCCCcEEEEec
Confidence 44445666666556677665432 12357999999999999999955443333467
Q ss_pred CCCChHHHHHHHHh
Q 006171 349 GSFNNSRLSEVMEQ 362 (658)
Q Consensus 349 g~~~~~~L~~fi~~ 362 (658)
|..+.+.|.++++.
T Consensus 129 g~~~~~~l~~~l~~ 142 (148)
T 2b5x_A 129 GGSGMKMLEKRVNR 142 (148)
T ss_dssp SCSTTHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 88788888888875
No 404
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=93.79 E-value=0.021 Score=46.82 Aligned_cols=81 Identities=9% Similarity=-0.045 Sum_probs=45.8
Q ss_pred cEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccch-hhhHHHhhCCCCcccceeeeeEEEEcCCCCCCCCCc
Q 006171 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR-LATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCM 233 (658)
Q Consensus 155 ~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~-~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~~~~ 233 (658)
.-++.|+++||++|++....+++.. -...+..||..++. ....+.+..+.. .|.+.++|+|.+ +|..
T Consensus 4 m~v~ly~~~~Cp~C~~~~~~L~~~~----i~~~~~~vd~~~~~~~~~el~~~~g~~-~~~~~~vP~i~i--~g~~----- 71 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWAKQWFEENN----IAFDETIIDDYAQRSKFYDEMNQSGKV-IFPISTVPQIFI--DDEH----- 71 (89)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHTT----CCCEEEECCSHHHHHHHHHHHHTTTCC-SSCCCSSCEEEE--TTEE-----
T ss_pred eEEEEEEcCCChhHHHHHHHHHHcC----CCceEEEeecCCChhHHHHHHHHhCCC-CCCCCccCEEEE--CCEE-----
Confidence 3477788999999998776665432 11234444544321 123477777620 011379999864 5521
Q ss_pred ccccCCCCHhHHHHHHHHh
Q 006171 234 TRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 234 ~~Y~G~rs~~~Lv~fv~k~ 252 (658)
-| ..++|.++..+.
T Consensus 72 ---i~--g~~~i~~~~~~~ 85 (89)
T 3msz_A 72 ---IG--GFTELKANADKI 85 (89)
T ss_dssp ---EE--SHHHHHHTHHHH
T ss_pred ---Ee--ChHHHHHHHHHH
Confidence 22 356777776554
No 405
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=93.74 E-value=0.34 Score=53.76 Aligned_cols=174 Identities=14% Similarity=0.071 Sum_probs=99.2
Q ss_pred CCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeeeEEEEcCCCCCCCCC
Q 006171 153 SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDC 232 (658)
Q Consensus 153 ~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~~~ 232 (658)
..++-+.++.+-|..|..+....+++|. |.+.+.+-..+ + . -...|++.+.++|.. .
T Consensus 18 ~~~v~l~~~~~~~~~~~~~~~~~~~~~~-~s~~i~~~~~~-~-~-----------------~~~~p~~~~~~~~~~---~ 74 (521)
T 1hyu_A 18 TKPVELIATLDDSAKSAEIKELLAEIAE-LSDKVTFKEDN-T-L-----------------PVRKPSFLITNPGSQ---Q 74 (521)
T ss_dssp CSCEEEEEECCSSHHHHHHHHHHHHHHT-TCTTEEEEECT-T-S-----------------SSCSSEEEEECTTCC---C
T ss_pred CCCEEEEEEeCCCcchHHHHHHHHHHHH-hCCceEEEEcC-C-c-----------------ccCCCEEEEecCCCc---c
Confidence 3455566666668777666655555543 23333332111 1 0 015699999877643 4
Q ss_pred cccccCCCCHhHHHHHHHHhh--ccCCcceeeccchhhhhhhhhcCCCcEEEEEE-eCCC-CC--CcHHHHHHHHhhccC
Q 006171 233 MTRFEGELSVDAVTDWFATAI--LKLPRIFYYTKESMGKNFLAKTGPHKVKVIFF-SKTG-ER--ASPFVRQISRNYWAY 306 (658)
Q Consensus 233 ~~~Y~G~rs~~~Lv~fv~k~v--~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f-~~~~-~~--~~~~~~~~A~~~~~~ 306 (658)
...|.|--.=..+..|+...+ .+.|.. ++. +..+.. ... +..+.|.+| ...| .| ..|.+..++..+. .
T Consensus 75 ~i~f~g~p~g~e~~s~~~~l~~~~~~~~~--~~~-~~~~~i-~~~-~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~ 148 (521)
T 1hyu_A 75 GPRFAGSPLGHEFTSLVLALLWTGGHPSK--EAQ-SLLEQI-RDI-DGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-R 148 (521)
T ss_dssp SCEEESCCCGGGHHHHHHHHHHHTTCCCC--SCH-HHHHHH-HHC-CSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-T
T ss_pred eEEEeccCcchhHHHHHHHHHhhcCCCCC--CCH-HHHHHH-Hhc-CCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-c
Confidence 578888766666666665432 122221 222 212333 222 233445555 4332 22 2455666776653 5
Q ss_pred ceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 307 ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 307 ~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
+.+..+... ..+++.++|+|.+.|++++ + + +.+ ..|..+.+.|.+++..
T Consensus 149 v~~~~vd~~--~~~~~~~~~~i~svPt~~i--~-g-~~~-~~G~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 149 IKHTAIDGG--TFQNEITERNVMGVPAVFV--N-G-KEF-GQGRMTLTEIVAKVDT 197 (521)
T ss_dssp EEEEEEETT--TCHHHHHHTTCCSSSEEEE--T-T-EEE-EESCCCHHHHHHHHCC
T ss_pred eEEEEEech--hhHHHHHHhCCCccCEEEE--C-C-EEE-ecCCCCHHHHHHHHhh
Confidence 666666532 3578999999999999977 3 2 333 5688888999999865
No 406
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=93.41 E-value=0.024 Score=62.23 Aligned_cols=89 Identities=10% Similarity=0.099 Sum_probs=55.0
Q ss_pred eccchhhhhhhhhcCCCcEEEEEE-eCC---CCCCcHHHHHHHHhhcc--------CceEEEEEecccccHhHHhhcCCC
Q 006171 262 YTKESMGKNFLAKTGPHKVKVIFF-SKT---GERASPFVRQISRNYWA--------YASFAFVLWREEESSIWWNTFEVE 329 (658)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~~---~~~~~~~~~~~A~~~~~--------~~~f~~v~~~~~~s~~l~~~f~V~ 329 (658)
++..+ ++..+... ..++.+|.| .+- |....|.+..++..|.+ .+.|+.|... ...+++++|+|.
T Consensus 28 Lt~~~-F~~~l~~~-~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d--~~~~la~~y~V~ 103 (470)
T 3qcp_A 28 LSGDD-FSRVHRVA-PLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCA--SEVDLCRKYDIN 103 (470)
T ss_dssp CSCSC-GGGTCTTG-GGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETT--TCHHHHHHTTCC
T ss_pred CCHHH-HHHHHHhC-CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECC--CCHHHHHHcCCC
Confidence 45544 45555432 224555555 332 22346777778888762 3667776543 247899999999
Q ss_pred CCCEEEEEeCCC-CCeeeecCCCChH
Q 006171 330 SAPAIVFLKDPG-VKPVVYYGSFNNS 354 (658)
Q Consensus 330 ~~Ptlvlfk~~~-~~p~~y~g~~~~~ 354 (658)
++||+++|++++ ..+..|.|..+.+
T Consensus 104 ~~PTlilf~~gg~~~~~~y~G~r~~e 129 (470)
T 3qcp_A 104 FVPRLFFFYPRDSCRSNEECGTSSLE 129 (470)
T ss_dssp SSCEEEEEEESSCCCTTSCCCCCCEE
T ss_pred ccCeEEEEECCCceEEEEeeCCCCHH
Confidence 999999997654 3444577764433
No 407
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=93.38 E-value=0.27 Score=44.04 Aligned_cols=85 Identities=11% Similarity=0.159 Sum_probs=52.7
Q ss_pred CcEEEEEEeC-C---CCCCcHHHHHHHHhhcc-CceEEEEEecccc---------------------cHhHHhhcCCCCC
Q 006171 278 HKVKVIFFSK-T---GERASPFVRQISRNYWA-YASFAFVLWREEE---------------------SSIWWNTFEVESA 331 (658)
Q Consensus 278 ~~v~vl~f~~-~---~~~~~~~~~~~A~~~~~-~~~f~~v~~~~~~---------------------s~~l~~~f~V~~~ 331 (658)
+++.+|.|.. . |....+.+..+...|.+ .+.+..|...... ...+.+.|+|...
T Consensus 30 gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 109 (152)
T 2lja_A 30 GKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLINGI 109 (152)
T ss_dssp TSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCSS
T ss_pred CCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCCC
Confidence 3566665532 1 22234555556666654 2555555433321 1268899999999
Q ss_pred CEEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 332 PAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 332 Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
|+++++...+.....+.|..+.+.|.++++.
T Consensus 110 P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 140 (152)
T 2lja_A 110 PRFILLDRDGKIISANMTRPSDPKTAEKFNE 140 (152)
T ss_dssp CCEEEECTTSCEEESSCCCTTCHHHHHHHHH
T ss_pred CEEEEECCCCeEEEccCCCCCHHHHHHHHHH
Confidence 9999997655433335677788889988876
No 408
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=93.28 E-value=0.094 Score=51.64 Aligned_cols=41 Identities=12% Similarity=0.029 Sum_probs=33.4
Q ss_pred cEEEEEeccCCCCCCCChHHHHHHHHHhhccc-ceeeeeccc
Q 006171 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGIA-NTGMVELGD 195 (658)
Q Consensus 155 ~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~-~vg~Vdc~e 195 (658)
++|+.|.+.||+.|..-.|.+.++.++++... .|..|.++.
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~ 75 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDS 75 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSC
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 55666679999999999999999999997653 777777763
No 409
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=93.19 E-value=0.1 Score=46.14 Aligned_cols=63 Identities=13% Similarity=0.024 Sum_probs=46.3
Q ss_pred HHHhhccC-----ceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 299 ISRNYWAY-----ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 299 ~A~~~~~~-----~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
++..|... ..+..|.+.......++.+|+|.+.||+++|+++. .-....|.++.+.+..|++.
T Consensus 40 i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~-ev~Ri~G~~~~~~f~~~L~~ 107 (116)
T 3dml_A 40 IAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDV-ESGRLEGYPGEDFFWPMLAR 107 (116)
T ss_dssp TTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTE-EEEEEECCCCHHHHHHHHHH
T ss_pred HHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCE-EEeeecCCCCHHHHHHHHHH
Confidence 44455443 56777776554446789999999999999999553 33346899999999998876
No 410
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=93.08 E-value=0.16 Score=40.02 Aligned_cols=70 Identities=10% Similarity=0.128 Sum_probs=45.8
Q ss_pred EEEEEeCCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCC-ChHHH
Q 006171 281 KVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF-NNSRL 356 (658)
Q Consensus 281 ~vl~f~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~-~~~~L 356 (658)
.|.|+.+.+ ....+.+..++..+...+.+..+. ..+++++|+|.+.||+++ ++ +.+ +.|.. +.+.|
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~-----~~~~~~~~~v~~~Pt~~~--~G--~~~-~~G~~~~~~~l 72 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK-----EMDQILEAGLTALPGLAV--DG--ELK-IMGRVASKEEI 72 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC-----SHHHHHHHTCSSSSCEEE--TT--EEE-ECSSCCCHHHH
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec-----CHHHHHHCCCCcCCEEEE--CC--EEE-EcCCCCCHHHH
Confidence 455665422 223455666777776555555553 467899999999999988 32 333 44877 78888
Q ss_pred HHHH
Q 006171 357 SEVM 360 (658)
Q Consensus 357 ~~fi 360 (658)
.+++
T Consensus 73 ~~~l 76 (77)
T 1ilo_A 73 KKIL 76 (77)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 7765
No 411
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=92.89 E-value=0.17 Score=45.52 Aligned_cols=86 Identities=14% Similarity=0.181 Sum_probs=53.6
Q ss_pred CcEEEEEEeC-CC---CCCcHHHHHHHHhhcc-CceEEEEEecccc--------------------cHhHHhhcCCCCCC
Q 006171 278 HKVKVIFFSK-TG---ERASPFVRQISRNYWA-YASFAFVLWREEE--------------------SSIWWNTFEVESAP 332 (658)
Q Consensus 278 ~~v~vl~f~~-~~---~~~~~~~~~~A~~~~~-~~~f~~v~~~~~~--------------------s~~l~~~f~V~~~P 332 (658)
.++.+|.|.. .| ....+.+..+...|.+ .+.+..|...+.. ...+.+.|+|...|
T Consensus 26 gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 105 (151)
T 2f9s_A 26 GKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLP 105 (151)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSSC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCCC
Confidence 3566665543 22 1112344445555654 3666666543321 24689999999999
Q ss_pred EEEEEeCCCCCeeeecCCCChHHHHHHHHhh
Q 006171 333 AIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 333 tlvlfk~~~~~p~~y~g~~~~~~L~~fi~~~ 363 (658)
+++++...+.....+.|..+.+.|.++++..
T Consensus 106 ~~~lid~~G~i~~~~~G~~~~~~l~~~l~~l 136 (151)
T 2f9s_A 106 TTFLINPEGKVVKVVTGTMTESMIHDYMNLI 136 (151)
T ss_dssp EEEEECTTSEEEEEEESCCCHHHHHHHHHHH
T ss_pred eEEEECCCCcEEEEEeCCCCHHHHHHHHHHH
Confidence 9999955444333467888899999998863
No 412
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=92.79 E-value=0.016 Score=52.24 Aligned_cols=69 Identities=12% Similarity=0.254 Sum_probs=43.1
Q ss_pred CCCccccCCCcEEEEEeccCCCCCCCC-hHHHHHHHHHhhcccceeeeecccch----hhhHHHhhCCCCcccceeeeeE
Q 006171 145 DFPSIFHDSKPWLIQVYSDGSYLCGQF-SGAWKTIAALLEGIANTGMVELGDIR----LATHLAERKPIGQIFFRRGLPS 219 (658)
Q Consensus 145 nF~~~v~~~~~~lV~FYapwC~~Ck~l-~P~w~~~A~~l~g~~~vg~Vdc~e~~----~~~~Lc~k~~i~k~f~V~~yPT 219 (658)
.+++.+...+ ++.|+++||++|++. .+.+++... ..+.+..+|.+.+. ....|.+.+| +..+|+
T Consensus 29 ~v~~~i~~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~---~~i~~~~vdvd~~~~~~~~~~~L~~~~g------~~tVP~ 97 (129)
T 3ctg_A 29 HVKDLIGQKE--VFVAAKTYCPYCKATLSTLFQELNV---PKSKALVLELDEMSNGSEIQDALEEISG------QKTVPN 97 (129)
T ss_dssp HHHHHHHHSS--EEEEECTTCHHHHHHHHHHHTTSCC---CGGGEEEEEGGGSTTHHHHHHHHHHHHS------CCSSCE
T ss_pred HHHHHHcCCC--EEEEECCCCCchHHHHHHHHHhcCc---cCCCcEEEEccccCCHHHHHHHHHHHhC------CCCCCE
Confidence 3444454343 678999999999987 666554321 11356667766432 1235777777 779999
Q ss_pred EEEcCCC
Q 006171 220 LVAFPPG 226 (658)
Q Consensus 220 l~~f~~g 226 (658)
| |.+|
T Consensus 98 v--fi~g 102 (129)
T 3ctg_A 98 V--YING 102 (129)
T ss_dssp E--EETT
T ss_pred E--EECC
Confidence 6 4455
No 413
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=92.54 E-value=0.34 Score=43.37 Aligned_cols=44 Identities=16% Similarity=0.231 Sum_probs=35.0
Q ss_pred cHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 319 SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 319 s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
...+.+.|+|...|+++++..++.....+.|..+.+.|.++|+.
T Consensus 95 ~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 138 (153)
T 2l5o_A 95 DKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDT 138 (153)
T ss_dssp SCHHHHHHTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHH
T ss_pred hHHHHHHcCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHH
Confidence 35689999999999999996555444457888888889988876
No 414
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=91.96 E-value=0.033 Score=53.50 Aligned_cols=42 Identities=14% Similarity=0.167 Sum_probs=33.8
Q ss_pred CCcEEEEEeccCCCCCCCChHHH---HHHHHHhhcccceeeeecc
Q 006171 153 SKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELG 194 (658)
Q Consensus 153 ~~~~lV~FYapwC~~Ck~l~P~w---~~~A~~l~g~~~vg~Vdc~ 194 (658)
.++.+|+|++.||+||+++.|.+ .++.+.+.+.+++..++..
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~v~~~~~~~~ 65 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYHVE 65 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEECS
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCCCCcEEEEEecc
Confidence 47899999999999999999975 6888888655566655543
No 415
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=91.78 E-value=0.34 Score=43.57 Aligned_cols=43 Identities=16% Similarity=0.156 Sum_probs=35.1
Q ss_pred HhHHhhcC--CCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 320 SIWWNTFE--VESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 320 ~~l~~~f~--V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
..+.+.|+ +...|+++++...+.....+.|..+.+.|.++|+.
T Consensus 93 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 137 (151)
T 3raz_A 93 RNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKL 137 (151)
T ss_dssp HHHHHTTTCCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHH
T ss_pred HHHHHHhCCccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHH
Confidence 56888999 88999999997666555557899999999999876
No 416
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=91.76 E-value=0.34 Score=41.92 Aligned_cols=43 Identities=16% Similarity=0.267 Sum_probs=34.6
Q ss_pred HhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 320 ~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
..+.+.|++...|+++++...+.....+.|..+.+.|.+++++
T Consensus 94 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 94 GKLLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp CHHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred hHHHHHcCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHh
Confidence 4689999999999999996555444457888888999988875
No 417
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=91.20 E-value=0.081 Score=46.19 Aligned_cols=62 Identities=10% Similarity=0.181 Sum_probs=38.4
Q ss_pred CccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeeccc--c-hh-hhHHHhhCCCCcccceeeeeEEEE
Q 006171 147 PSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGD--I-RL-ATHLAERKPIGQIFFRRGLPSLVA 222 (658)
Q Consensus 147 ~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e--~-~~-~~~Lc~k~~i~k~f~V~~yPTl~~ 222 (658)
++.+++++ ++.|.++||++|++..+.+++.. +.+..+|.+. + .. ...|.+..| ...+|++.+
T Consensus 11 ~~~i~~~~--v~vy~~~~Cp~C~~ak~~L~~~~------i~~~~~dvd~~~~~~~~~~~l~~~~g------~~tvP~vfi 76 (114)
T 3h8q_A 11 VGLIERSR--VVIFSKSYCPHSTRVKELFSSLG------VECNVLELDQVDDGARVQEVLSEITN------QKTVPNIFV 76 (114)
T ss_dssp HHHHHHCS--EEEEECTTCHHHHHHHHHHHHTT------CCCEEEETTTSTTHHHHHHHHHHHHS------CCSSCEEEE
T ss_pred HHHhccCC--EEEEEcCCCCcHHHHHHHHHHcC------CCcEEEEecCCCChHHHHHHHHHHhC------CCccCEEEE
Confidence 34444443 44599999999998877766531 3566666663 1 11 123556666 679999855
No 418
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=91.14 E-value=0.15 Score=50.05 Aligned_cols=41 Identities=7% Similarity=-0.057 Sum_probs=32.6
Q ss_pred cEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeeccc
Q 006171 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD 195 (658)
Q Consensus 155 ~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e 195 (658)
++|+.|.++||+.|..-.|.+.++.++++.. +.|..|.++.
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~ 75 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNS 75 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSC
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 4455557999999999999999999999764 3777777763
No 419
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=91.12 E-value=0.62 Score=41.10 Aligned_cols=82 Identities=11% Similarity=0.176 Sum_probs=48.8
Q ss_pred CcEEEEEEe-C---CCCCCcHHHHHHHHhh-ccC-ceEEEEEecccc-----------------------cHhHHhhcCC
Q 006171 278 HKVKVIFFS-K---TGERASPFVRQISRNY-WAY-ASFAFVLWREEE-----------------------SSIWWNTFEV 328 (658)
Q Consensus 278 ~~v~vl~f~-~---~~~~~~~~~~~~A~~~-~~~-~~f~~v~~~~~~-----------------------s~~l~~~f~V 328 (658)
+++.+|.|. . .|....+.+..++..| .+. +.+..|...... ...+++.|+|
T Consensus 33 gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 112 (148)
T 3fkf_A 33 NRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYAI 112 (148)
T ss_dssp TSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTC
T ss_pred CcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcCC
Confidence 356666553 2 2222345555566666 443 556666543322 3478999999
Q ss_pred CCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 329 ESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 329 ~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
...|+++++..++. +.+... +.+.|.++++.
T Consensus 113 ~~~P~~~lid~~G~--i~~~~~-~~~~l~~~l~~ 143 (148)
T 3fkf_A 113 LTLPTNILLSPTGK--ILARDI-QGEALTGKLKE 143 (148)
T ss_dssp CSSSEEEEECTTSB--EEEESC-CHHHHHHHHHH
T ss_pred CCcCEEEEECCCCe--EEEecC-CHHHHHHHHHH
Confidence 99999999954432 223222 77778887765
No 420
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=90.99 E-value=0.42 Score=43.58 Aligned_cols=42 Identities=14% Similarity=0.222 Sum_probs=32.4
Q ss_pred HhHHhhcCCCCCCEEEEEeCCCCCeeeecCCC--ChHHHHHHHHh
Q 006171 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF--NNSRLSEVMEQ 362 (658)
Q Consensus 320 ~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~--~~~~L~~fi~~ 362 (658)
..++++|+|.+.||++++..++.....+ |.. +.+.+.++++.
T Consensus 106 ~~l~~~~~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~ 149 (154)
T 2ju5_A 106 QELKAQYKVTGFPELVFIDAEGKQLARM-GFEPGGGAAYVSKVKS 149 (154)
T ss_dssp HHHHHHTTCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHH
Confidence 4799999999999999995444443345 877 77888888875
No 421
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=90.30 E-value=0.5 Score=42.75 Aligned_cols=37 Identities=11% Similarity=0.245 Sum_probs=28.8
Q ss_pred CCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHhh
Q 006171 327 EVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 327 ~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~~ 363 (658)
++...|+++++..++.....+.|..+.+.|.++|+..
T Consensus 113 ~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 149 (165)
T 3or5_A 113 GITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMA 149 (165)
T ss_dssp CSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHH
T ss_pred CCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 8999999999965554434567888899999998763
No 422
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=90.07 E-value=0.34 Score=43.52 Aligned_cols=46 Identities=13% Similarity=0.127 Sum_probs=36.7
Q ss_pred cHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHhhc
Q 006171 319 SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (658)
Q Consensus 319 s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~~~ 364 (658)
...+.+.|+|...|+++++...+.....+.|..+.+.|.++|++..
T Consensus 98 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~ 143 (154)
T 3ia1_A 98 PHEVAARFKVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLAG 143 (154)
T ss_dssp HHHHHTTSSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTT
T ss_pred hHHHHHHhCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhcc
Confidence 4678999999999999998655544445788889999999998753
No 423
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=89.82 E-value=1.2 Score=39.27 Aligned_cols=71 Identities=14% Similarity=0.123 Sum_probs=43.2
Q ss_pred CcEEEEEEe----CCCCCCcHHHHHHHHhhccC-ceEEEEEecccccHh-------------------------HHhhcC
Q 006171 278 HKVKVIFFS----KTGERASPFVRQISRNYWAY-ASFAFVLWREEESSI-------------------------WWNTFE 327 (658)
Q Consensus 278 ~~v~vl~f~----~~~~~~~~~~~~~A~~~~~~-~~f~~v~~~~~~s~~-------------------------l~~~f~ 327 (658)
+++.+|.|. ..|....+.+..+...|.+. +.+..|...+ ..+ +.+.|+
T Consensus 31 gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 108 (148)
T 3hcz_A 31 AKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIER--KDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYD 108 (148)
T ss_dssp CSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCS--SSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHC
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecC--CHHHHHHHHHHcCCCCceEEeccccchhHHHhcC
Confidence 456666552 23333456666677777654 5566665432 223 899999
Q ss_pred CCCCCEEEEEeCCCCCeeeecCC
Q 006171 328 VESAPAIVFLKDPGVKPVVYYGS 350 (658)
Q Consensus 328 V~~~Ptlvlfk~~~~~p~~y~g~ 350 (658)
|...|+++++..++.....+.|.
T Consensus 109 i~~~P~~~lid~~G~i~~~~~g~ 131 (148)
T 3hcz_A 109 IYATPVLYVLDKNKVIIAKRIGY 131 (148)
T ss_dssp CCSSCEEEEECTTCBEEEESCCG
T ss_pred cCCCCEEEEECCCCcEEEecCCH
Confidence 99999999995544333334554
No 424
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=89.50 E-value=0.73 Score=41.05 Aligned_cols=44 Identities=11% Similarity=0.081 Sum_probs=31.7
Q ss_pred hHHhhcCCCCCCEEEEEeCCCCCeeeecCCC--ChHHHHHHHHhhc
Q 006171 321 IWWNTFEVESAPAIVFLKDPGVKPVVYYGSF--NNSRLSEVMEQNK 364 (658)
Q Consensus 321 ~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~--~~~~L~~fi~~~~ 364 (658)
.+.+.|+|...|+++++...+.....+.|.. +.+.|.++|++..
T Consensus 96 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~ 141 (152)
T 3gl3_A 96 QTPRLYGVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAAL 141 (152)
T ss_dssp HHHHHTTCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHT
T ss_pred hhHHHcCCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHH
Confidence 5788899999999999965544333356643 4578999988753
No 425
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=88.73 E-value=0.27 Score=48.56 Aligned_cols=52 Identities=6% Similarity=-0.071 Sum_probs=37.2
Q ss_pred CCCcEEEEEeccC-CCCCC-----CChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCC
Q 006171 152 DSKPWLIQVYSDG-SYLCG-----QFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKP 207 (658)
Q Consensus 152 ~~~~~lV~FYapw-C~~Ck-----~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~ 207 (658)
.+++++|.||+.| |+.|. .-.|.+.+. +.+ +.|..|+++........+++++
T Consensus 47 ~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~g-v~VvgIS~Ds~~~~~~f~~~~g 104 (224)
T 3keb_A 47 SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WPH-LKLIVITVDSPSSLARARHEHG 104 (224)
T ss_dssp TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CTT-SEEEEEESSCHHHHHHHHHHHC
T ss_pred CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cCC-CEEEEEECCCHHHHHHHHHHcC
Confidence 3578999999888 99999 666666665 433 3777788875444556777776
No 426
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=88.60 E-value=0.83 Score=41.06 Aligned_cols=41 Identities=17% Similarity=0.355 Sum_probs=33.5
Q ss_pred HHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 322 WWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 322 l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
+.+.|+|...|+++++...+.....+.|..+.+.|.+.|+.
T Consensus 112 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 152 (160)
T 3lor_A 112 TMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGS 152 (160)
T ss_dssp HHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHH
T ss_pred HHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHH
Confidence 88999999999999997655444456788888889888876
No 427
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=88.45 E-value=0.14 Score=47.64 Aligned_cols=39 Identities=18% Similarity=0.134 Sum_probs=31.4
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceee
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGM 190 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~ 190 (658)
+..+.+|+|+.-.|+||+++.|.+.++.+++...+++..
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~ 58 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQK 58 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEE
Confidence 467899999999999999999999888887754444433
No 428
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=88.15 E-value=0.94 Score=40.67 Aligned_cols=42 Identities=10% Similarity=0.271 Sum_probs=33.6
Q ss_pred hHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 321 IWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 321 ~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
.+.+.|+|...|+++++...+.....+.|..+.+.|.+.|+.
T Consensus 108 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 149 (158)
T 3eyt_A 108 RTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIAT 149 (158)
T ss_dssp HHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHH
T ss_pred HHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHH
Confidence 589999999999999996555444446788888888888876
No 429
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=87.20 E-value=0.86 Score=41.15 Aligned_cols=44 Identities=11% Similarity=0.207 Sum_probs=35.2
Q ss_pred HhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHhh
Q 006171 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 320 ~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~~ 363 (658)
..+++.|+|...|+++++..++.....+.|..+.+.|.++++..
T Consensus 111 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~ 154 (164)
T 2h30_A 111 GTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNP 154 (164)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCT
T ss_pred hHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 56899999999999999955554434467888999999999863
No 430
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=86.65 E-value=3 Score=38.30 Aligned_cols=56 Identities=18% Similarity=0.205 Sum_probs=36.6
Q ss_pred CceEEEEEecccccHhHHhhcCCCCCCEEEEEeCC-CCCeeeecCCCChHHHHHHHHh
Q 006171 306 YASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP-GVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 306 ~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~-~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
...+..+...+.+...+.++|++.++|+++++... +..-....| ++.+.+.++++.
T Consensus 77 ~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~ 133 (153)
T 2dlx_A 77 HFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEWHQ-LDVSSFLDQVTG 133 (153)
T ss_dssp TEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCCCCEEESS-CCHHHHHHHHHH
T ss_pred CeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCcEeeecCC-CCHHHHHHHHHH
Confidence 44455555433334678999999999999999765 333333455 787776665544
No 431
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=86.02 E-value=1.3 Score=40.02 Aligned_cols=47 Identities=6% Similarity=0.138 Sum_probs=31.8
Q ss_pred HhHHhhcCCCCCCEEEEEeCCCCCeeeecCCC--ChHHHHHHHHhhccC
Q 006171 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF--NNSRLSEVMEQNKLQ 366 (658)
Q Consensus 320 ~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~--~~~~L~~fi~~~~~~ 366 (658)
..+.+.|+|...|+++++...+.....+.|.. +..++.+.+..+..+
T Consensus 105 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~~ 153 (158)
T 3hdc_A 105 GQVQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEGH 153 (158)
T ss_dssp SHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC--
T ss_pred HHHHHHhCCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHHHHhhccc
Confidence 57999999999999888865554434466654 455666666665443
No 432
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=86.01 E-value=1.6 Score=39.03 Aligned_cols=41 Identities=15% Similarity=0.217 Sum_probs=27.9
Q ss_pred cHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 319 SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 319 s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
...+++.|+|...|+++++..++.. ++.. .+.+.|.++++.
T Consensus 98 ~~~~~~~~~v~~~P~~~lid~~G~i--~~~~-~~~~~l~~~l~~ 138 (152)
T 2lrn_A 98 VKDVLESYCIVGFPHIILVDPEGKI--VAKE-LRGDDLYNTVEK 138 (152)
T ss_dssp HHHHHHHTTCCSSCEEEEECTTSEE--EEEC-CCTTHHHHHHHH
T ss_pred hHHHHHHhCCCcCCeEEEECCCCeE--EEee-CCHHHHHHHHHH
Confidence 3578899999999999999544322 2221 345677777765
No 433
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=85.16 E-value=0.22 Score=44.65 Aligned_cols=65 Identities=15% Similarity=0.146 Sum_probs=38.5
Q ss_pred CCccccCCCcEEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccc---h-hhhHHHhhCCCCcccceeeeeEE
Q 006171 146 FPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDI---R-LATHLAERKPIGQIFFRRGLPSL 220 (658)
Q Consensus 146 F~~~v~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~---~-~~~~Lc~k~~i~k~f~V~~yPTl 220 (658)
|++++..+. ++.|..+||++|++....+++. ... +.+..||.+.. . ....|.+..| ...+|+|
T Consensus 7 ~~~ii~~~~--Vvvysk~~Cp~C~~ak~lL~~~----~~~~v~~~~idid~~~d~~~~~~~l~~~~G------~~tVP~I 74 (127)
T 3l4n_A 7 YSLILDLSP--IIIFSKSTCSYSKGMKELLENE----YQFIPNYYIIELDKHGHGEELQEYIKLVTG------RGTVPNL 74 (127)
T ss_dssp HHHHHTSCS--EEEEECTTCHHHHHHHHHHHHH----EEEESCCEEEEGGGSTTHHHHHHHHHHHHS------CCSSCEE
T ss_pred HHHHHccCC--EEEEEcCCCccHHHHHHHHHHh----cccCCCcEEEEecCCCCHHHHHHHHHHHcC------CCCcceE
Confidence 445554444 7889999999998877665542 111 24556666532 1 1122444446 6689988
Q ss_pred EE
Q 006171 221 VA 222 (658)
Q Consensus 221 ~~ 222 (658)
.+
T Consensus 75 fI 76 (127)
T 3l4n_A 75 LV 76 (127)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 434
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=84.87 E-value=0.36 Score=45.48 Aligned_cols=41 Identities=17% Similarity=0.267 Sum_probs=32.2
Q ss_pred CCCcEEEEEeccCCCCCCCChHHH-HHHHHHhhcccceeeee
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAW-KTIAALLEGIANTGMVE 192 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w-~~~A~~l~g~~~vg~Vd 192 (658)
+.++.+|+||+++|++|..+.+.. .++++.+.+.+++--+.
T Consensus 16 ~~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~v~~~~~~ 57 (195)
T 3c7m_A 16 NADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDIVAFTPFH 57 (195)
T ss_dssp SCTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTCEEEEEE
T ss_pred CCCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCceEEEEEe
Confidence 456789999999999999999988 88888776545444444
No 435
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=84.79 E-value=1.8 Score=40.04 Aligned_cols=36 Identities=11% Similarity=0.197 Sum_probs=27.0
Q ss_pred CCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 327 EVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 327 ~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
++...|+++++...+.....+.|..+.+.|.++++.
T Consensus 143 ~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 178 (183)
T 3lwa_A 143 PASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALP 178 (183)
T ss_dssp CTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHH
T ss_pred CCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHH
Confidence 678899888886555444457888888889888875
No 436
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=84.56 E-value=2 Score=39.35 Aligned_cols=40 Identities=15% Similarity=0.199 Sum_probs=30.8
Q ss_pred HhhcCCCCCCEEEEEeCCCCCeeeecCCCC-hHHHHHHHHh
Q 006171 323 WNTFEVESAPAIVFLKDPGVKPVVYYGSFN-NSRLSEVMEQ 362 (658)
Q Consensus 323 ~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~-~~~L~~fi~~ 362 (658)
.++|+|.+.||++++...+.....+.|..+ .+.+.+++++
T Consensus 123 ~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~ 163 (172)
T 3f9u_A 123 RVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQT 163 (172)
T ss_dssp HHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHH
T ss_pred HHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHH
Confidence 789999999999999544443334678887 8888888765
No 437
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=84.43 E-value=0.55 Score=44.50 Aligned_cols=55 Identities=9% Similarity=0.023 Sum_probs=42.9
Q ss_pred CCcEEEEEeccCCCCCCC-ChHHHHHHHHHhhcc-c-ceeeeecccchhhhHHHhhCC
Q 006171 153 SKPWLIQVYSDGSYLCGQ-FSGAWKTIAALLEGI-A-NTGMVELGDIRLATHLAERKP 207 (658)
Q Consensus 153 ~~~~lV~FYapwC~~Ck~-l~P~w~~~A~~l~g~-~-~vg~Vdc~e~~~~~~Lc~k~~ 207 (658)
+.++|+.|.+.||+.|.. =.|.+.+.+.+++.. + .|..|.++......+.|++.+
T Consensus 48 k~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D~~~~~~~f~~~~~ 105 (176)
T 4f82_A 48 KRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVNDAFVMGAWGRDLH 105 (176)
T ss_dssp CEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTT
T ss_pred CeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHhC
Confidence 335566667999999998 899999999999765 3 688888886555566888877
No 438
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=84.28 E-value=1.5 Score=39.11 Aligned_cols=42 Identities=10% Similarity=0.179 Sum_probs=30.1
Q ss_pred hHHhhcCCCCCCEEEEEeCCCCCeeeecCCC--ChHHHHHHHHh
Q 006171 321 IWWNTFEVESAPAIVFLKDPGVKPVVYYGSF--NNSRLSEVMEQ 362 (658)
Q Consensus 321 ~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~--~~~~L~~fi~~ 362 (658)
.+.+.|+|...|+++++...+.....+.|.. +...+.++|+.
T Consensus 97 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ 140 (154)
T 3kcm_A 97 RVGKLYGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNN 140 (154)
T ss_dssp HHHHHHTCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHT
T ss_pred HHHHHhCCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHH
Confidence 3888999999998888865544333356654 56688888875
No 439
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=83.77 E-value=1.8 Score=37.36 Aligned_cols=60 Identities=5% Similarity=0.115 Sum_probs=42.3
Q ss_pred cHHHHHHHHhhccCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHH
Q 006171 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVM 360 (658)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi 360 (658)
.+.+..++.++ .+.|..+.+.+ .+++..+|++. .|+|++|.++ +. +..|.++.+.|.+|+
T Consensus 47 ~~~L~~l~~e~--~i~~~~vDId~--d~~l~~~ygv~-VP~l~~~~dG--~~-v~~g~~~~~~L~~~L 106 (107)
T 2fgx_A 47 IASLRVLQKKS--WFELEVINIDG--NEHLTRLYNDR-VPVLFAVNED--KE-LCHYFLDSDVIGAYL 106 (107)
T ss_dssp HHHHHHHHHHS--CCCCEEEETTT--CHHHHHHSTTS-CSEEEETTTT--EE-EECSSCCCHHHHHHH
T ss_pred HHHHHHHHHhc--CCeEEEEECCC--CHHHHHHhCCC-CceEEEEECC--EE-EEecCCCHHHHHHHh
Confidence 34445555544 36677776543 56799999997 9999999865 33 356888988898886
No 440
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=83.67 E-value=0.71 Score=42.93 Aligned_cols=33 Identities=9% Similarity=0.325 Sum_probs=28.0
Q ss_pred CCCcEEEEEeccCCC-CCCCChHHHHHHHHHhhc
Q 006171 152 DSKPWLIQVYSDGSY-LCGQFSGAWKTIAALLEG 184 (658)
Q Consensus 152 ~~~~~lV~FYapwC~-~Ck~l~P~w~~~A~~l~g 184 (658)
.+++++|.|+.+||+ .|....+...++.+.++.
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~ 64 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKE 64 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhc
Confidence 578999999999996 699888888888777753
No 441
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=83.48 E-value=2.1 Score=38.67 Aligned_cols=40 Identities=23% Similarity=0.326 Sum_probs=31.4
Q ss_pred hHHhhcCCCCCCEEEEEeCCCCCeeeecCCC-ChHHHHHHHHh
Q 006171 321 IWWNTFEVESAPAIVFLKDPGVKPVVYYGSF-NNSRLSEVMEQ 362 (658)
Q Consensus 321 ~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~-~~~~L~~fi~~ 362 (658)
.+.+.|+|...|+++++...+.. .+.|.. +.+.|.+++++
T Consensus 121 ~~~~~~~v~~~P~~~lid~~G~i--~~~g~~~~~~~l~~~l~~ 161 (165)
T 3ha9_A 121 SLVEKFNVRSIDYIVIMDKSSNV--LYAGTTPSLGELESVIKS 161 (165)
T ss_dssp HHHHHTTCCSSSEEEEEETTCCE--EEEEESCCHHHHHHHHHH
T ss_pred HHHHHhCCCCceEEEEEcCCCcE--EEeCCCCCHHHHHHHHHH
Confidence 68899999999999999655432 337777 78888888875
No 442
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=82.76 E-value=1.7 Score=43.96 Aligned_cols=83 Identities=12% Similarity=0.060 Sum_probs=48.9
Q ss_pred cEEEEEeccCCCCCCCChHHHHHHHHHhhcc---cceeeee--ccc--------chhhhHHHhhCCCCcccceeee--eE
Q 006171 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGI---ANTGMVE--LGD--------IRLATHLAERKPIGQIFFRRGL--PS 219 (658)
Q Consensus 155 ~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~---~~vg~Vd--c~e--------~~~~~~Lc~k~~i~k~f~V~~y--PT 219 (658)
..+..|.+++|++|.+.....++++.+..-. ..+..+| ... ......+.+++| ++++ |+
T Consensus 44 ~~VelyTs~gCp~C~~Ak~lL~~~~~~~~vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G------~~tVyTPq 117 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEALRKMIQKGDVVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALG------RNGVYTPQ 117 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHHHHHHHHHTSSEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTT------CSCCCSSE
T ss_pred cEEEEEeCCCCCChHHHHHHHHHhhccCCeeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhC------CCcccCCE
Confidence 5667788999999999888888887653210 0111222 000 011223677777 7788 98
Q ss_pred EEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 220 LVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 220 l~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
|++ +|.. . -|..+.+.|.+.+.+.
T Consensus 118 I~I--ng~~------~-v~G~d~~~l~~~l~~~ 141 (270)
T 2axo_A 118 AIL--NGRD------H-VKGADVRGIYDRLDAF 141 (270)
T ss_dssp EEE--TTTE------E-EETTCHHHHHHHHHHH
T ss_pred EEE--CCEE------e-ecCCCHHHHHHHHHHh
Confidence 766 4431 1 2334567777777554
No 443
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=81.87 E-value=3.3 Score=36.73 Aligned_cols=39 Identities=15% Similarity=0.281 Sum_probs=27.1
Q ss_pred hHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 321 IWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 321 ~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
.+.+.|+|...|+++++...+. +.+.. .+.+.|.+.++.
T Consensus 107 ~~~~~~~v~~~P~~~lid~~G~--i~~~~-~~~~~l~~~l~~ 145 (150)
T 3fw2_A 107 EVAKQYSIYKIPANILLSSDGK--ILAKN-LRGEELKKKIEN 145 (150)
T ss_dssp HHHHHTTCCSSSEEEEECTTSB--EEEES-CCHHHHHHHHHH
T ss_pred HHHHHcCCCccCeEEEECCCCE--EEEcc-CCHHHHHHHHHH
Confidence 6899999999999999955443 22322 266677776654
No 444
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=81.71 E-value=0.71 Score=45.36 Aligned_cols=57 Identities=12% Similarity=0.146 Sum_probs=39.6
Q ss_pred CcEEEEEeccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCCCcccceeeeeEEEE
Q 006171 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVA 222 (658)
Q Consensus 154 ~~~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i~k~f~V~~yPTl~~ 222 (658)
..-++.|..+||++|++....+++. + +.+-.+|.+++.....|.+.++ ..++|+|.+
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~~-----~-i~~~~~~i~~~~~~~~l~~~~g------~~~vP~~~~ 225 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHDK-----G-LSFEEIILGHDATIVSVRAVSG------RTTVPQVFI 225 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHH-----T-CCCEEEETTTTCCHHHHHHHTC------CSSSCEEEE
T ss_pred cceEEEEECCCChHHHHHHHHHHHc-----C-CceEEEECCCchHHHHHHHHhC------CCCcCEEEE
Confidence 4457788899999999877665542 2 3566677764433355777787 779999853
No 445
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=80.77 E-value=3.9 Score=34.77 Aligned_cols=37 Identities=14% Similarity=0.138 Sum_probs=30.5
Q ss_pred cHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHH
Q 006171 319 SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVME 361 (658)
Q Consensus 319 s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~ 361 (658)
..+++++|+|.++||+++ ++ + .|.|..+.+.|.+|+.
T Consensus 55 ~~~l~~~~~V~~~PT~~i--~G--~--~~~G~~~~~~l~~~~~ 91 (106)
T 3kp8_A 55 QAQECTEAGITSYPTWII--NG--R--TYTGVRSLEALAVASG 91 (106)
T ss_dssp CCHHHHHTTCCSSSEEEE--TT--E--EEESCCCHHHHHHHHT
T ss_pred hHHHHHHcCCeEeCEEEE--CC--E--EecCCCCHHHHHHHhC
Confidence 467999999999999777 33 2 3889999999999874
No 446
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=80.71 E-value=0.65 Score=42.94 Aligned_cols=84 Identities=14% Similarity=0.112 Sum_probs=45.1
Q ss_pred CcEEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcCC--CCCCEEEEEeCCCCCeeeecCC-
Q 006171 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEV--ESAPAIVFLKDPGVKPVVYYGS- 350 (658)
Q Consensus 278 ~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~V--~~~Ptlvlfk~~~~~p~~y~g~- 350 (658)
+++.+|.|. +-| ....|.+..++..+...+.|..|...... ..++..|++ ..+||+++|..++.....+.|.
T Consensus 46 ~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~-~~~~~~~~~~~~~~Pt~~~~d~~G~~~~~~~G~~ 124 (164)
T 1sen_A 46 GLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEE-EPKDEDFSPDGGYIPRILFLDPSGKVHPEIINEN 124 (164)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGG-SCSCGGGCTTCSCSSEEEEECTTSCBCTTCCCTT
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCc-hHHHHHhcccCCcCCeEEEECCCCCEEEEEeCCC
Confidence 345566554 222 11233333333333334567777654321 227788888 5599999994333222224453
Q ss_pred ---------CChHHHHHHHHh
Q 006171 351 ---------FNNSRLSEVMEQ 362 (658)
Q Consensus 351 ---------~~~~~L~~fi~~ 362 (658)
.+.+.|.++|+.
T Consensus 125 ~~~~~~~~~~~~~~l~~~l~~ 145 (164)
T 1sen_A 125 GNPSYKYFYVSAEQVVQGMKE 145 (164)
T ss_dssp SCTTSTTCCCSHHHHHHHHHH
T ss_pred CccchhcccCCHHHHHHHHHH
Confidence 567777777765
No 447
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=80.59 E-value=1.5 Score=39.84 Aligned_cols=43 Identities=16% Similarity=0.197 Sum_probs=31.0
Q ss_pred HhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 320 ~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
..+++.|+|...|+.+++..++.....+.|..+.+.|.++++.
T Consensus 115 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 157 (168)
T 2b1k_A 115 GMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKP 157 (168)
T ss_dssp CHHHHHHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHH
T ss_pred hHHHHHcCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHH
Confidence 5688999999999777765444333346788888888777654
No 448
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=80.58 E-value=6.4 Score=34.75 Aligned_cols=43 Identities=14% Similarity=0.108 Sum_probs=32.0
Q ss_pred HhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 320 ~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
..+++.|+|...|+++++..++.....+.|..+.+.|.++++.
T Consensus 107 ~~~~~~~~v~~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~ 149 (156)
T 1kng_A 107 GRASIEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLP 149 (156)
T ss_dssp SHHHHHTTCCSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHH
T ss_pred hHHHHhcCcCccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHH
Confidence 4688999999999877775444333346888888888887765
No 449
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=80.31 E-value=0.58 Score=42.32 Aligned_cols=58 Identities=16% Similarity=0.084 Sum_probs=35.3
Q ss_pred cEEEEEec----cCCCCCCCChHHHHHHHHHhhcccceeeeecccchhh-hHHHhhCCCCcccceeeeeEEEEcCCC
Q 006171 155 PWLIQVYS----DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRGLPSLVAFPPG 226 (658)
Q Consensus 155 ~~lV~FYa----pwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~-~~Lc~k~~i~k~f~V~~yPTl~~f~~g 226 (658)
.+.|..++ |||++|++....+++. .+.+..+|.++++.. ..|.+..| ...+|+|. .+|
T Consensus 36 ~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~------gv~y~~vdI~~d~~~~~~L~~~~G------~~tvP~Vf--I~G 98 (135)
T 2wci_A 36 PILLYMKGSPKLPSCGFSAQAVQALAAC------GERFAYVDILQNPDIRAELPKYAN------WPTFPQLW--VDG 98 (135)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHTT------CSCCEEEEGGGCHHHHHHHHHHHT------CCSSCEEE--ETT
T ss_pred CEEEEEEecCCCCCCccHHHHHHHHHHc------CCceEEEECCCCHHHHHHHHHHHC------CCCcCEEE--ECC
Confidence 45554444 9999998776655432 136778888754332 23444445 66889864 454
No 450
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.80 E-value=1.4 Score=38.14 Aligned_cols=59 Identities=8% Similarity=0.003 Sum_probs=33.1
Q ss_pred EEEEEeccCCCCCCCChHHHHHHHHHhhcc-cceeeeecccchhhh-HHHhhC--------CCCcccceeeeeEEE
Q 006171 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLAT-HLAERK--------PIGQIFFRRGLPSLV 221 (658)
Q Consensus 156 ~lV~FYapwC~~Ck~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~~~-~Lc~k~--------~i~k~f~V~~yPTl~ 221 (658)
-++.|+.+||+.|+...-. +++-+.|+.. +.+-.+|.+.++... .|.+.+ + ...+|+|.
T Consensus 9 ~V~vy~~~~C~~C~~~~~~-~~ak~~L~~~gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g------~~tvP~vf 77 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQ-QDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEKKPTQG------NPLPPQIF 77 (111)
T ss_dssp CEEEEECSSCSCHHHHHHH-HHHHHHHHHTTCCEEEEETTTCHHHHHHHHHSCCTTTCCSSS------SCCSCEEE
T ss_pred EEEEEEcCCCCCcccchhH-HHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHhcccccccCC------CCCCCEEE
Confidence 4677889999999821100 0122223322 377888887543322 255553 4 56788764
No 451
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=78.54 E-value=2 Score=39.33 Aligned_cols=63 Identities=21% Similarity=0.298 Sum_probs=39.6
Q ss_pred CcEEEEEEeC-CC---CCCcHHHHHHHHhhcc--CceEEEEEeccccc----------------------HhHHhhcCCC
Q 006171 278 HKVKVIFFSK-TG---ERASPFVRQISRNYWA--YASFAFVLWREEES----------------------SIWWNTFEVE 329 (658)
Q Consensus 278 ~~v~vl~f~~-~~---~~~~~~~~~~A~~~~~--~~~f~~v~~~~~~s----------------------~~l~~~f~V~ 329 (658)
.++.+|.|.. -| ....+.+..++..|.+ .+.+..|....... ..+++.|+|.
T Consensus 48 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 127 (165)
T 3s9f_A 48 GKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSVE 127 (165)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCCC
Confidence 4566666642 22 1123455557777764 45566665433211 5789999999
Q ss_pred CCCEEEEEeCC
Q 006171 330 SAPAIVFLKDP 340 (658)
Q Consensus 330 ~~Ptlvlfk~~ 340 (658)
..|+++++...
T Consensus 128 ~~Pt~~lid~~ 138 (165)
T 3s9f_A 128 SIPTLIGLNAD 138 (165)
T ss_dssp SSSEEEEEETT
T ss_pred CCCEEEEEeCC
Confidence 99999999864
No 452
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=77.48 E-value=2.4 Score=37.54 Aligned_cols=64 Identities=25% Similarity=0.441 Sum_probs=39.5
Q ss_pred CcEEEEEEeCC-C---CCCcHHHHHHHHhhc--cCceEEEEEecccc----------------------cHhHHhhcCCC
Q 006171 278 HKVKVIFFSKT-G---ERASPFVRQISRNYW--AYASFAFVLWREEE----------------------SSIWWNTFEVE 329 (658)
Q Consensus 278 ~~v~vl~f~~~-~---~~~~~~~~~~A~~~~--~~~~f~~v~~~~~~----------------------s~~l~~~f~V~ 329 (658)
.++.+|.|... | ....+.+..++..|. ..+.+..|...... ...++++|+|.
T Consensus 28 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (146)
T 1o8x_A 28 GKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVE 107 (146)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCC
T ss_pred CCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCCC
Confidence 45666666432 2 112344555666675 35566666544321 24689999999
Q ss_pred CCCEEEEEe-CCC
Q 006171 330 SAPAIVFLK-DPG 341 (658)
Q Consensus 330 ~~Ptlvlfk-~~~ 341 (658)
..|+++++. .++
T Consensus 108 ~~Pt~~lid~~~G 120 (146)
T 1o8x_A 108 SIPTLIGVDADSG 120 (146)
T ss_dssp SSSEEEEEETTTC
T ss_pred CCCEEEEEECCCC
Confidence 999999997 443
No 453
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=77.18 E-value=0.88 Score=37.16 Aligned_cols=54 Identities=11% Similarity=0.017 Sum_probs=33.8
Q ss_pred EEEEecc----CCCCCCCChHHHHHHHHHhhcccceeeeecc-----cchh-hhHHHhhCCCCccccee-----eeeEEE
Q 006171 157 LIQVYSD----GSYLCGQFSGAWKTIAALLEGIANTGMVELG-----DIRL-ATHLAERKPIGQIFFRR-----GLPSLV 221 (658)
Q Consensus 157 lV~FYap----wC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~-----e~~~-~~~Lc~k~~i~k~f~V~-----~yPTl~ 221 (658)
++.|..+ ||++|++....+++. + +.+-.+|.+ +++. ...|.+..| .. .+|+|.
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~-----g-i~y~~idI~~~~~~~~~~~~~~l~~~~g------~~~~~~~tvP~v~ 69 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK-----K-QPFEFINIMPEKGVFDDEKIAELLTKLG------RDTQIGLTMPQVF 69 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT-----T-CCEEEEESCSBTTBCCHHHHHHHHHHHT------CSCCTTCCSCEEE
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc-----C-CCEEEEEeeccccccCHHHHHHHHHHhC------CCCCCCCccCEEE
Confidence 4567889 999998766554432 2 356666666 3322 234666666 55 899875
Q ss_pred E
Q 006171 222 A 222 (658)
Q Consensus 222 ~ 222 (658)
+
T Consensus 70 i 70 (87)
T 1aba_A 70 A 70 (87)
T ss_dssp C
T ss_pred E
Confidence 3
No 454
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=77.02 E-value=4.3 Score=37.58 Aligned_cols=42 Identities=12% Similarity=0.271 Sum_probs=29.4
Q ss_pred HhHHhhcCCCCCCEEEEEeCCCCCeeeecCC----------CChHHHHHHHHhh
Q 006171 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGS----------FNNSRLSEVMEQN 363 (658)
Q Consensus 320 ~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~----------~~~~~L~~fi~~~ 363 (658)
..+.+.|+|...|+++++...+. +++.|. .+.+.|.+.|+..
T Consensus 106 ~~~~~~~~v~~~P~~~lid~~G~--i~~~g~~~~~~~~~g~~~~~~l~~~i~~l 157 (188)
T 2cvb_A 106 QEVAKAYRALRTPEVFLFDERRL--LRYHGRVNDNPKDPSKVQSHDLEAAIEAL 157 (188)
T ss_dssp SHHHHHTTCCEESEEEEECTTCB--EEEEECSSSCTTCGGGCCCCHHHHHHHHH
T ss_pred chHHHHcCCCCCCeEEEECCCCc--EEEEEecCCccccccccCHHHHHHHHHHH
Confidence 46888999999999999955442 234343 3567788887764
No 455
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=76.98 E-value=2.3 Score=37.39 Aligned_cols=64 Identities=25% Similarity=0.432 Sum_probs=38.5
Q ss_pred CcEEEEEEeCC-C---CCCcHHHHHHHHhhc--cCceEEEEEecccc----------------------cHhHHhhcCCC
Q 006171 278 HKVKVIFFSKT-G---ERASPFVRQISRNYW--AYASFAFVLWREEE----------------------SSIWWNTFEVE 329 (658)
Q Consensus 278 ~~v~vl~f~~~-~---~~~~~~~~~~A~~~~--~~~~f~~v~~~~~~----------------------s~~l~~~f~V~ 329 (658)
+++.+|.|... | ....+.+..++..|. ..+.+..|...... ...+++.|+|.
T Consensus 28 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 107 (144)
T 1o73_A 28 GKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVE 107 (144)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTCC
T ss_pred CCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCCC
Confidence 35666655432 2 112344555666665 34556666544321 24689999999
Q ss_pred CCCEEEEEe-CCC
Q 006171 330 SAPAIVFLK-DPG 341 (658)
Q Consensus 330 ~~Ptlvlfk-~~~ 341 (658)
..|+++++. .++
T Consensus 108 ~~Pt~~lid~~~G 120 (144)
T 1o73_A 108 SIPTLITINADTG 120 (144)
T ss_dssp SSSEEEEEETTTC
T ss_pred CCCEEEEEECCCC
Confidence 999999998 443
No 456
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=75.73 E-value=2.6 Score=37.13 Aligned_cols=64 Identities=20% Similarity=0.342 Sum_probs=39.4
Q ss_pred CcEEEEEEeCC-C---CCCcHHHHHHHHhhc--cCceEEEEEecccc----------------------cHhHHhhcCCC
Q 006171 278 HKVKVIFFSKT-G---ERASPFVRQISRNYW--AYASFAFVLWREEE----------------------SSIWWNTFEVE 329 (658)
Q Consensus 278 ~~v~vl~f~~~-~---~~~~~~~~~~A~~~~--~~~~f~~v~~~~~~----------------------s~~l~~~f~V~ 329 (658)
.++.+|.|... | ....+.+..++..|. ..+.+..|...... ...+++.|+|.
T Consensus 28 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (144)
T 1i5g_A 28 GKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVK 107 (144)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCCC
Confidence 35666666432 2 112344555666776 35556666544321 25689999999
Q ss_pred CCCEEEEEe-CCC
Q 006171 330 SAPAIVFLK-DPG 341 (658)
Q Consensus 330 ~~Ptlvlfk-~~~ 341 (658)
..|+++++. ..+
T Consensus 108 ~~P~~~lid~~~G 120 (144)
T 1i5g_A 108 SIPTLVGVEADSG 120 (144)
T ss_dssp SSSEEEEEETTTC
T ss_pred CCCEEEEEECCCC
Confidence 999999997 443
No 457
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=75.27 E-value=1.7 Score=42.46 Aligned_cols=53 Identities=8% Similarity=-0.090 Sum_probs=41.4
Q ss_pred CCcEEEEEe-ccCCCCCCCChHHHHHHHHHhhccc-ceeeeecccchhhhHHHhh
Q 006171 153 SKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIA-NTGMVELGDIRLATHLAER 205 (658)
Q Consensus 153 ~~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~~-~vg~Vdc~e~~~~~~Lc~k 205 (658)
++.+++.|| ++||+.|..-.+.+++...+++... .|..|.++........++.
T Consensus 52 GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh~aw~~~ 106 (216)
T 3sbc_A 52 GKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTNI 106 (216)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTS
T ss_pred CCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhHHHHHHH
Confidence 577888899 9999999999999999999998765 7888898854333334433
No 458
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=75.18 E-value=3.5 Score=38.36 Aligned_cols=44 Identities=2% Similarity=-0.045 Sum_probs=31.6
Q ss_pred HhHHhhcCCCCCCEEEEEeCCCCCeee---------ecCCCChHHHHHHHHhh
Q 006171 320 SIWWNTFEVESAPAIVFLKDPGVKPVV---------YYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 320 ~~l~~~f~V~~~Ptlvlfk~~~~~p~~---------y~g~~~~~~L~~fi~~~ 363 (658)
..+.+.|+|...|+++++...+..... +.|..+.+.|.+.|+..
T Consensus 120 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~l 172 (196)
T 2ywi_A 120 QEVAKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDAL 172 (196)
T ss_dssp CHHHHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHH
T ss_pred hHHHHHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHH
Confidence 468899999999999999654432222 23666778888888764
No 459
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=74.90 E-value=8.9 Score=35.23 Aligned_cols=43 Identities=14% Similarity=0.157 Sum_probs=32.5
Q ss_pred HhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 320 ~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
..+.+.|+|...|+++++...+.....+.|..+.+.|.+++..
T Consensus 122 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 164 (176)
T 3kh7_A 122 GTLGLDLGVYGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAP 164 (176)
T ss_dssp CHHHHHHTCCSSCEEEEECTTCBEEEEEESCCCHHHHHHHTHH
T ss_pred chHHHHcCCCCCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHH
Confidence 4688899999999888886555443446788888888877665
No 460
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=74.29 E-value=3.2 Score=43.62 Aligned_cols=43 Identities=14% Similarity=0.259 Sum_probs=32.6
Q ss_pred HhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 320 ~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
..+++.|+|...|+++++...+.....+.|..+.+.|.++|++
T Consensus 154 ~~l~~~ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~ 196 (352)
T 2hyx_A 154 YATWTNYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQ 196 (352)
T ss_dssp SHHHHHTTCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHH
T ss_pred HHHHHHcCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHH
Confidence 4688999999999999995554443446788888888877665
No 461
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=73.67 E-value=2.6 Score=39.95 Aligned_cols=55 Identities=9% Similarity=0.059 Sum_probs=40.9
Q ss_pred CCcEEEEEe-ccCCCCCC-CChHHHHHHHHHh-hccc--ceeeeecccchhhhHHHhhCC
Q 006171 153 SKPWLIQVY-SDGSYLCG-QFSGAWKTIAALL-EGIA--NTGMVELGDIRLATHLAERKP 207 (658)
Q Consensus 153 ~~~~lV~FY-apwC~~Ck-~l~P~w~~~A~~l-~g~~--~vg~Vdc~e~~~~~~Lc~k~~ 207 (658)
++.+++.|| +.||+-|. .-.+.|.+.+.++ +..+ .|..|.++........|++.+
T Consensus 43 gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~V~gvS~D~~~~~~~~~~~~~ 102 (182)
T 1xiy_A 43 NKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITNNDIYVLKSWFKSMD 102 (182)
T ss_dssp TCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEESSCHHHHHHHHHHTT
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCHHHHHHHHHHcC
Confidence 445555566 56999999 7889999999999 6554 388888885444556788887
No 462
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=73.45 E-value=2.8 Score=47.81 Aligned_cols=48 Identities=13% Similarity=0.065 Sum_probs=37.9
Q ss_pred CCccCcccccCccCCCCH--HHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHH
Q 006171 34 SFPPSHYDALGIKPYSSV--EQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYEL 86 (658)
Q Consensus 34 ~~~~d~Y~iLgv~~~a~~--~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Aye~ 86 (658)
+..+|||.+||++.+... .+|++|||+|++..+++ .+++..+..|+.|
T Consensus 626 ~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-----~~r~~lvd~a~~v 675 (681)
T 2pzi_A 626 DNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-----RHRYTLVDMANKV 675 (681)
T ss_dssp SCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-----HHHHHHHHHHHHH
T ss_pred ccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-----HHHHHHHHHhccc
Confidence 335579999999776655 77999999999977555 4688888888765
No 463
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=73.03 E-value=1.5 Score=37.87 Aligned_cols=54 Identities=7% Similarity=-0.032 Sum_probs=33.5
Q ss_pred EEEEec-----cCCCCCCCChHHHHHHHHHhhcccceeeeecccchhh-hHHHhhCCCCcccceeeeeEEEE
Q 006171 157 LIQVYS-----DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRGLPSLVA 222 (658)
Q Consensus 157 lV~FYa-----pwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~-~~Lc~k~~i~k~f~V~~yPTl~~ 222 (658)
+|.|.. |||++|++....+++. + +.+..+|.++++.. ..|.+..| ...+|+|.+
T Consensus 18 Vvlf~kg~~~~~~Cp~C~~ak~~L~~~-----g-i~y~~~di~~d~~~~~~l~~~~g------~~tvP~ifi 77 (111)
T 3zyw_A 18 CMLFMKGTPQEPRCGFSKQMVEILHKH-----N-IQFSSFDIFSDEEVRQGLKAYSS------WPTYPQLYV 77 (111)
T ss_dssp EEEEESBCSSSBSSHHHHHHHHHHHHT-----T-CCCEEEEGGGCHHHHHHHHHHHT------CCSSCEEEE
T ss_pred EEEEEecCCCCCcchhHHHHHHHHHHc-----C-CCeEEEECcCCHHHHHHHHHHHC------CCCCCEEEE
Confidence 455667 9999998876555432 1 35677787754433 22444445 568998753
No 464
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=72.66 E-value=5.5 Score=37.28 Aligned_cols=55 Identities=2% Similarity=-0.063 Sum_probs=42.2
Q ss_pred CCcEEEEEe-ccCCCCCCCChHHHHHHHHHhhccc-c-eeeeecccchhhhHHHhhCC
Q 006171 153 SKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIA-N-TGMVELGDIRLATHLAERKP 207 (658)
Q Consensus 153 ~~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~~-~-vg~Vdc~e~~~~~~Lc~k~~ 207 (658)
++.+++.|| ..||+-|..-.+.|.+.+.+++..+ . |..|.++......+.|++.+
T Consensus 42 gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~~w~~~~~ 99 (171)
T 2xhf_A 42 GRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMAAWGKTVD 99 (171)
T ss_dssp TSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHHC
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcC
Confidence 455555666 4699999999999999999998654 3 88888886555556788876
No 465
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=72.10 E-value=5.5 Score=35.58 Aligned_cols=42 Identities=7% Similarity=0.072 Sum_probs=30.3
Q ss_pred hHHhhcCCCCCC---------------EEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 321 IWWNTFEVESAP---------------AIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 321 ~l~~~f~V~~~P---------------tlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
.+.+.|+|...| +++++...+.....+.|..+.+.|.+.|+.
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 158 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIAT 158 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHH
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHH
Confidence 488899998778 777776555444446788888888877765
No 466
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=72.00 E-value=18 Score=29.58 Aligned_cols=46 Identities=13% Similarity=0.210 Sum_probs=34.1
Q ss_pred EEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 309 FAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 309 f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
+..+.+.+ ++++..+|++. .|+|++ .++ +.+ . |.++.+.|.++++.
T Consensus 29 ~~~vdid~--~~~l~~~~g~~-vPtl~~-~~G--~~v-~-g~~~~~~L~~~l~~ 74 (87)
T 1ttz_A 29 FFSVFIDD--DAALESAYGLR-VPVLRD-PMG--REL-D-WPFDAPRLRAWLDA 74 (87)
T ss_dssp EEEEECTT--CHHHHHHHTTT-CSEEEC-TTC--CEE-E-SCCCHHHHHHHHHT
T ss_pred eEEEECCC--CHHHHHHhCCC-cCeEEE-ECC--EEE-e-CCCCHHHHHHHHHH
Confidence 55665433 56799999998 999988 543 333 3 88899999999875
No 467
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=71.26 E-value=3.3 Score=34.16 Aligned_cols=55 Identities=11% Similarity=0.078 Sum_probs=33.0
Q ss_pred EEEEeccCCCCC------CCChHHHHHHHHHhhcc-cceeeeecccchhh-hHHHhhCCCCcccceeeeeEEEE
Q 006171 157 LIQVYSDGSYLC------GQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-THLAERKPIGQIFFRRGLPSLVA 222 (658)
Q Consensus 157 lV~FYapwC~~C------k~l~P~w~~~A~~l~g~-~~vg~Vdc~e~~~~-~~Lc~k~~i~k~f~V~~yPTl~~ 222 (658)
++.|+++||+.| ++..-. |+.. +.+-.+|.+.++.. ..|.+..|.. ...+|+|.+
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~-------L~~~~i~~~~~di~~~~~~~~~l~~~~g~~----~~~vP~ifi 66 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRI-------LDGKRIQYQLVDISQDNALRDEMRTLAGNP----KATPPQIVN 66 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHH-------HHHTTCCCEEEETTSCHHHHHHHHHHTTCT----TCCSCEEEE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHH-------HHHCCCceEEEECCCCHHHHHHHHHHhCCC----CCCCCEEEE
Confidence 577889999999 554433 3322 36778888754322 2355555511 348898743
No 468
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=70.35 E-value=3.6 Score=40.28 Aligned_cols=54 Identities=9% Similarity=0.076 Sum_probs=42.5
Q ss_pred CCCcEEEEEe-ccCCCCCCCChHHHHHHHHHhhccc-ceeeeecccchhhhHHHhh
Q 006171 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIA-NTGMVELGDIRLATHLAER 205 (658)
Q Consensus 152 ~~~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~~-~vg~Vdc~e~~~~~~Lc~k 205 (658)
.++.+++.|| ++||+.|..-...+.+...+++... .|..|.++........+++
T Consensus 55 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~sh~~w~~~ 110 (219)
T 3tue_A 55 KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAHLQWTLQ 110 (219)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHHHHHHHHS
T ss_pred CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhhHHHHhhh
Confidence 3567888899 8999999999999999999998775 8888898854443444444
No 469
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=70.04 E-value=1.5 Score=42.06 Aligned_cols=42 Identities=14% Similarity=0.168 Sum_probs=30.6
Q ss_pred CCCcEEEEEeccCCCCCCCChHHH-HHHHHHh--hcccceeeeec
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAW-KTIAALL--EGIANTGMVEL 193 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w-~~~A~~l--~g~~~vg~Vdc 193 (658)
+.++.+|+|....|+||+++.+.. ..+.+.+ .|.+++...+.
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~ 72 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNV 72 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEec
Confidence 467889999999999999998875 5666666 34445554444
No 470
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=69.17 E-value=12 Score=34.07 Aligned_cols=53 Identities=15% Similarity=0.152 Sum_probs=33.0
Q ss_pred eEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCC-------CChHHHHHHHH
Q 006171 308 SFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS-------FNNSRLSEVME 361 (658)
Q Consensus 308 ~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~-------~~~~~L~~fi~ 361 (658)
.|..|.+.+ +..++..+|++.+.||+++|+.++..-....|. +...++.++++
T Consensus 79 ~fv~V~vD~-e~~~~~~~~~v~~~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~ 138 (151)
T 3ph9_A 79 KFIMLNLMH-ETTDKNLSPDGQYVPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIE 138 (151)
T ss_dssp TCEEEEESS-CCSCGGGCTTCCCSSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHH
T ss_pred CeEEEEecC-CchhhHhhcCCCCCCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHH
Confidence 466776542 234567899999999999998544332224555 44455555544
No 471
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=68.65 E-value=9.6 Score=34.28 Aligned_cols=42 Identities=19% Similarity=0.195 Sum_probs=29.9
Q ss_pred hHHhhcCCCCCC---------------EEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 321 IWWNTFEVESAP---------------AIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 321 ~l~~~f~V~~~P---------------tlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
.+.+.|+|...| +++++...+.....+.|..+.+.|.+.|+.
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 161 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRR 161 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHH
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHH
Confidence 578899998766 777775555444446788888888777664
No 472
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=68.19 E-value=9.6 Score=35.00 Aligned_cols=69 Identities=7% Similarity=0.155 Sum_probs=40.5
Q ss_pred HHHHHHHHhhc-cCceEEEEEecccc---cHhHHhhcCCC-----------------------CCCEEEEEeCCCCCeee
Q 006171 294 PFVRQISRNYW-AYASFAFVLWREEE---SSIWWNTFEVE-----------------------SAPAIVFLKDPGVKPVV 346 (658)
Q Consensus 294 ~~~~~~A~~~~-~~~~f~~v~~~~~~---s~~l~~~f~V~-----------------------~~Ptlvlfk~~~~~p~~ 346 (658)
+.+..+...|. ..+.+..|.....+ ...+.+++++. ..|+++++...+.....
T Consensus 80 ~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~ 159 (186)
T 1jfu_A 80 PALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIAT 159 (186)
T ss_dssp HHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEEE
T ss_pred HHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCEEEE
Confidence 33444555554 34556666543321 14566667664 78999999655543334
Q ss_pred ecCCCC--hHHHHHHHHh
Q 006171 347 YYGSFN--NSRLSEVMEQ 362 (658)
Q Consensus 347 y~g~~~--~~~L~~fi~~ 362 (658)
+.|..+ .+.|.++|+.
T Consensus 160 ~~g~~~~~~~~l~~~l~~ 177 (186)
T 1jfu_A 160 IAGPAEWASEDALKLIRA 177 (186)
T ss_dssp EESCCCTTSHHHHHHHHH
T ss_pred EecCCccCHHHHHHHHHH
Confidence 667654 6778888775
No 473
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=67.41 E-value=3.1 Score=38.73 Aligned_cols=80 Identities=6% Similarity=-0.089 Sum_probs=47.0
Q ss_pred CcEEEEEEeCC-C-C--CCcHHHHHHHHhhccCceEEEEEecccccHhHHhhcC---CCCCCEEEEEeCCCCCeeeecCC
Q 006171 278 HKVKVIFFSKT-G-E--RASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFE---VESAPAIVFLKDPGVKPVVYYGS 350 (658)
Q Consensus 278 ~~v~vl~f~~~-~-~--~~~~~~~~~A~~~~~~~~f~~v~~~~~~s~~l~~~f~---V~~~Ptlvlfk~~~~~p~~y~g~ 350 (658)
.++.++.|..+ | + ...|.+..++..+. .+.|..|... +.+++..+|+ +.+.||+++|++++.. +...|.
T Consensus 54 ~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d--~~~~~~~~~~~~~v~~iPt~i~~~~~G~~-~~~~g~ 129 (167)
T 1z6n_A 54 RRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKG--RAEDDLRQRLALERIAIPLVLVLDEEFNL-LGRFVE 129 (167)
T ss_dssp SCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHH--HHHHHTTTTTTCSSCCSSEEEEECTTCCE-EEEEES
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECC--CCHHHHHHHHHcCCCCcCeEEEECCCCCE-EEEEcC
Confidence 35666666321 1 1 23566666776653 4555555432 3467888887 9999999999876543 323355
Q ss_pred CChHHHHHHHHh
Q 006171 351 FNNSRLSEVMEQ 362 (658)
Q Consensus 351 ~~~~~L~~fi~~ 362 (658)
.. ..+.+.+..
T Consensus 130 ~p-~~~~~~i~~ 140 (167)
T 1z6n_A 130 RP-QAVLDGGPQ 140 (167)
T ss_dssp SC-HHHHHHCHH
T ss_pred CC-HHHHHhHHH
Confidence 44 344555544
No 474
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=65.50 E-value=3.1 Score=35.63 Aligned_cols=48 Identities=13% Similarity=0.052 Sum_probs=29.8
Q ss_pred cCCCCCCCChHHHHHHHHHhhcccceeeeecccchhh-hHHHhhCCCCcccceeeeeEEEE
Q 006171 163 DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRGLPSLVA 222 (658)
Q Consensus 163 pwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~-~~Lc~k~~i~k~f~V~~yPTl~~ 222 (658)
|||++|++....+++. + +.+-.+|.++++.. ..|.+..+ ...+|+|.+
T Consensus 31 p~Cp~C~~ak~~L~~~-----g-i~~~~~dI~~~~~~~~~l~~~~g------~~tvP~ifi 79 (109)
T 3ipz_A 31 PMCGFSNTVVQILKNL-----N-VPFEDVNILENEMLRQGLKEYSN------WPTFPQLYI 79 (109)
T ss_dssp BSSHHHHHHHHHHHHT-----T-CCCEEEEGGGCHHHHHHHHHHHT------CSSSCEEEE
T ss_pred CCChhHHHHHHHHHHc-----C-CCcEEEECCCCHHHHHHHHHHHC------CCCCCeEEE
Confidence 6999998876555442 1 36677777644332 23545446 668997643
No 475
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=65.32 E-value=2.3 Score=41.67 Aligned_cols=41 Identities=17% Similarity=0.170 Sum_probs=30.3
Q ss_pred CCCcEEEEEeccCCCCCCCChHH-HHHHHHHh--hcccceeeee
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGA-WKTIAALL--EGIANTGMVE 192 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~-w~~~A~~l--~g~~~vg~Vd 192 (658)
+.++.+|+|....|+||+++.|. ..++.+.+ .|.+++.-.+
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~ 81 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRH 81 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEe
Confidence 45678999999999999999985 57777676 3444444333
No 476
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=64.94 E-value=23 Score=29.42 Aligned_cols=53 Identities=15% Similarity=0.194 Sum_probs=37.2
Q ss_pred cCceEEEEEecccccHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHhh
Q 006171 305 AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 305 ~~~~f~~v~~~~~~s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~~ 363 (658)
..+.|..+.+.+.+.+++..+|+ .+.|+++ .++ +.+ ..+.++.+.|.++++..
T Consensus 42 ~~i~~~~vdi~~~~~~el~~~~g-~~vP~l~--~~g--~~~-~~~g~~~~~l~~~l~~~ 94 (100)
T 1wjk_A 42 DRFILQEVDITLPENSTWYERYK-FDIPVFH--LNG--QFL-MMHRVNTSKLEKQLRKL 94 (100)
T ss_dssp SSSEEEEEETTSSTTHHHHHHSS-SSCSEEE--ESS--SEE-EESSCCHHHHHHHHHSS
T ss_pred hCCeEEEEECCCcchHHHHHHHC-CCCCEEE--ECC--EEE-EecCCCHHHHHHHHHHH
Confidence 34778888765333578999999 9999863 443 233 35567888999999763
No 477
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=64.27 E-value=7.4 Score=33.83 Aligned_cols=37 Identities=14% Similarity=0.339 Sum_probs=27.5
Q ss_pred hhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHhh
Q 006171 324 NTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (658)
Q Consensus 324 ~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~~ 363 (658)
+.|+|...|+++++...+. +++ +..+.+.|.+++++.
T Consensus 103 ~~~~v~~~P~~~lid~~G~--i~~-~~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 103 QLYDIRATPTIYLLDGRKR--VIL-KDTSMEQLIDYLATQ 139 (142)
T ss_dssp TCSCCCSSSEEEEECTTCB--EEE-CSCCHHHHHHHHHC-
T ss_pred HHcCCCCCCeEEEECCCCC--EEe-cCCCHHHHHHHHHHH
Confidence 4899999999999965432 334 667888999998763
No 478
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=63.90 E-value=3.6 Score=42.56 Aligned_cols=95 Identities=11% Similarity=0.038 Sum_probs=51.9
Q ss_pred CCCcEEEEEe-ccCCCCCCCChHHHHHHHHHhhcccceeeeecccchhhhHHHhhCCC------------Cccccee---
Q 006171 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPI------------GQIFFRR--- 215 (658)
Q Consensus 152 ~~~~~lV~FY-apwC~~Ck~l~P~w~~~A~~l~g~~~vg~Vdc~e~~~~~~Lc~k~~i------------~k~f~V~--- 215 (658)
.++++++.|| +.||+.|..=.+.+.+. ..++ ..|..|+++........++++++ .+.|.|.
T Consensus 23 ~Gk~vvl~F~p~~~tp~C~~e~~~~~~~--~~~~-~~v~gis~D~~~~~~~f~~~~~l~fp~l~D~~~~v~~~ygv~~~~ 99 (322)
T 4eo3_A 23 YGKYTILFFFPKAGTSGSTREAVEFSRE--NFEK-AQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILHEFFNVLENG 99 (322)
T ss_dssp TTSEEEEEECSSTTSHHHHHHHHHHHHS--CCTT-EEEEEEESCCHHHHHHHHHHHTCCSEEEECTTCHHHHHTTCEETT
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHH--hhCC-CEEEEEeCCCHHHHHHHHHhhCCceEEEEcCchHHHHhcCCCCCC
Confidence 3678899999 56898897655555331 1122 35556666633333334444332 1234463
Q ss_pred -eeeEEEEcCCCCCCCCCcccccC---CCCHhHHHHHHHHh
Q 006171 216 -GLPSLVAFPPGCKSSDCMTRFEG---ELSVDAVTDWFATA 252 (658)
Q Consensus 216 -~yPTl~~f~~g~~~~~~~~~Y~G---~rs~~~Lv~fv~k~ 252 (658)
.+|+..++-+.+. ....|.+ ...++.+.+++.+.
T Consensus 100 ~~~r~tfiId~~G~---i~~~~~~v~~~~h~~~~l~~~~~~ 137 (322)
T 4eo3_A 100 KTVRSTFLIDRWGF---VRKEWRRVKVEGHVQEVKEALDRL 137 (322)
T ss_dssp EECCEEEEECTTSB---EEEEEESCCSTTHHHHHHHHHHHH
T ss_pred cCccEEEEECCCCE---EEEEEeCCCccccHHHHHHHHhhh
Confidence 4667666643332 1223433 44578888888765
No 479
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=63.57 E-value=5.4 Score=34.93 Aligned_cols=49 Identities=10% Similarity=0.025 Sum_probs=30.3
Q ss_pred cCCCCCCCChHHHHHHHHHhhccc--ceeeeecccchhh-hHHHhhCCCCcccceeeeeEEEE
Q 006171 163 DGSYLCGQFSGAWKTIAALLEGIA--NTGMVELGDIRLA-THLAERKPIGQIFFRRGLPSLVA 222 (658)
Q Consensus 163 pwC~~Ck~l~P~w~~~A~~l~g~~--~vg~Vdc~e~~~~-~~Lc~k~~i~k~f~V~~yPTl~~ 222 (658)
|||++|++....+++. +.. .+..+|..++... ..|.+..| ...+|+|.+
T Consensus 29 p~Cp~C~~ak~lL~~~-----gv~~~~~~~~dv~~~~~~~~~l~~~sg------~~tvP~vfI 80 (121)
T 3gx8_A 29 PKCGFSRATIGLLGNQ-----GVDPAKFAAYNVLEDPELREGIKEFSE------WPTIPQLYV 80 (121)
T ss_dssp BCTTHHHHHHHHHHHH-----TBCGGGEEEEECTTCHHHHHHHHHHHT------CCSSCEEEE
T ss_pred CCCccHHHHHHHHHHc-----CCCcceEEEEEecCCHHHHHHHHHHhC------CCCCCeEEE
Confidence 6999999887666553 221 2667777644332 23444445 568898743
No 480
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=63.18 E-value=11 Score=33.55 Aligned_cols=33 Identities=6% Similarity=0.097 Sum_probs=23.5
Q ss_pred HHhhcCCCCCCEEEEEeCCCCCeeeecCCCChH
Q 006171 322 WWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNS 354 (658)
Q Consensus 322 l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~ 354 (658)
+.+.|++...|+++++...+.....+.|..+.+
T Consensus 105 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~e 137 (152)
T 2lrt_A 105 YISLYNVTNLPSVFLVNRNNELSARGENIKDLD 137 (152)
T ss_dssp HHHHHTCCSCSEEEEEETTTEEEEETTTCSCHH
T ss_pred HHHHcCcccCceEEEECCCCeEEEecCCHHHHH
Confidence 889999999999999965554333356665543
No 481
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=62.36 E-value=2.9 Score=36.62 Aligned_cols=48 Identities=6% Similarity=-0.010 Sum_probs=28.7
Q ss_pred cCCCCCCCChHHHHHHHHHhhcccc-eeeeecccchhh-hHHHhhCCCCcccceeeeeEEEE
Q 006171 163 DGSYLCGQFSGAWKTIAALLEGIAN-TGMVELGDIRLA-THLAERKPIGQIFFRRGLPSLVA 222 (658)
Q Consensus 163 pwC~~Ck~l~P~w~~~A~~l~g~~~-vg~Vdc~e~~~~-~~Lc~k~~i~k~f~V~~yPTl~~ 222 (658)
|||++|++....+++. + +. +..+|.++++.. ..|.+..+ ...+|+|.+
T Consensus 33 p~Cp~C~~ak~lL~~~-----g-v~~~~~vdV~~d~~~~~~l~~~tg------~~tvP~vfI 82 (118)
T 2wem_A 33 PQCGFSNAVVQILRLH-----G-VRDYAAYNVLDDPELRQGIKDYSN------WPTIPQVYL 82 (118)
T ss_dssp BSSHHHHHHHHHHHHT-----T-CCCCEEEESSSCHHHHHHHHHHHT------CCSSCEEEE
T ss_pred CccHHHHHHHHHHHHc-----C-CCCCEEEEcCCCHHHHHHHHHHhC------CCCcCeEEE
Confidence 6999998876555432 1 22 667777644332 23444445 568998743
No 482
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=61.99 E-value=2 Score=40.65 Aligned_cols=32 Identities=3% Similarity=-0.194 Sum_probs=26.3
Q ss_pred cCCCcEEEEEeccCCCCCCCChHHHHHHHHHh
Q 006171 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALL 182 (658)
Q Consensus 151 ~~~~~~lV~FYapwC~~Ck~l~P~w~~~A~~l 182 (658)
.+..+.+|+|....|+||+++.+...++.++.
T Consensus 12 g~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~ 43 (182)
T 3gn3_A 12 GHGPRLFEVFLEPTCPFSVKAFFKLDDLLAQA 43 (182)
T ss_dssp ECCSEEEEEEECTTCHHHHHHHTTHHHHHHHH
T ss_pred CCCCEEEEEEECCCCHhHHHHHHHHHHHHHHh
Confidence 35678899999999999999998887766554
No 483
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=58.47 E-value=15 Score=32.02 Aligned_cols=37 Identities=11% Similarity=0.248 Sum_probs=26.3
Q ss_pred HHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHH
Q 006171 322 WWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVME 361 (658)
Q Consensus 322 l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~ 361 (658)
+.+.|+|...|+++++...+. +++.+ ...+.|.+|++
T Consensus 105 ~~~~~~v~~~P~~~lid~~G~--i~~~~-~~~~~l~~~l~ 141 (142)
T 3eur_A 105 NKNLYDLRAIPTLYLLDKNKT--VLLKD-ATLQKVEQYLA 141 (142)
T ss_dssp HTTCSCCTTCSEEEEECTTCB--EEEEE-ECHHHHHHHHH
T ss_pred hhhhcCCCcCCeEEEECCCCc--EEecC-CCHHHHHHHHh
Confidence 578899999999999965442 33432 25677888875
No 484
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=56.32 E-value=2.6 Score=43.17 Aligned_cols=37 Identities=14% Similarity=0.138 Sum_probs=30.1
Q ss_pred cHhHHhhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHH
Q 006171 319 SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVME 361 (658)
Q Consensus 319 s~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~ 361 (658)
.++++++|+|.++||+++ ++ + .|.|..+.++|.+|+.
T Consensus 240 ~~~la~~~gI~~vPT~~i--~G--~--~~~G~~~~~~L~~~l~ 276 (291)
T 3kp9_A 240 QAQECTEAGITSYPTWII--NG--R--TYTGVRSLEALAVASG 276 (291)
T ss_dssp CCHHHHTTTCCSTTEEEE--TT--E--EEESCCCHHHHHHHTC
T ss_pred HHHHHHHcCCcccCeEEE--CC--E--EecCCCCHHHHHHHHC
Confidence 578999999999999655 33 2 3899999999999874
No 485
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=52.95 E-value=4.4 Score=38.99 Aligned_cols=36 Identities=17% Similarity=0.254 Sum_probs=28.1
Q ss_pred hHH-hhcCCCCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 321 IWW-NTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 321 ~l~-~~f~V~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
... .++||.+.||+++ ++ + .+.|..+.+.|.+.|..
T Consensus 158 ~~a~~~~GV~GtPtfvv---ng-~--~~~G~~~~e~l~~~i~~ 194 (205)
T 3gmf_A 158 DEAINQYNVSGTPSFMI---DG-I--LLAGTHDWASLRPQILA 194 (205)
T ss_dssp HHHHHHHCCCSSSEEEE---TT-E--ECTTCCSHHHHHHHHHH
T ss_pred HHHHHHcCCccCCEEEE---CC-E--EEeCCCCHHHHHHHHHH
Confidence 355 8899999999988 33 2 36888888889888775
No 486
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=51.58 E-value=5.5 Score=37.01 Aligned_cols=31 Identities=10% Similarity=0.149 Sum_probs=25.2
Q ss_pred CCCcEEEEEeccCCCCCCCChHHH-HHHHHHh
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAW-KTIAALL 182 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w-~~~A~~l 182 (658)
+.++.++.|+.+.|++|..+.+.. .++.+.+
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~ 41 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNY 41 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHh
Confidence 456789999999999999999987 4666665
No 487
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=49.76 E-value=37 Score=30.53 Aligned_cols=38 Identities=18% Similarity=0.121 Sum_probs=26.1
Q ss_pred hcCCCCCC------EEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 325 TFEVESAP------AIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 325 ~f~V~~~P------tlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
.|++...| +.+++...+.....+.|..+.+.|.+.|+.
T Consensus 122 ~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 165 (171)
T 3cmi_A 122 KSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEE 165 (171)
T ss_dssp SCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHH
T ss_pred cCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHH
Confidence 46787888 777775544443446787888888887765
No 488
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=48.34 E-value=37 Score=32.26 Aligned_cols=42 Identities=12% Similarity=0.250 Sum_probs=29.6
Q ss_pred HhHHhhcCCCCCCEEEEEeCCCCCeeeecC-----------CCChHHHHHHHHhh
Q 006171 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYG-----------SFNNSRLSEVMEQN 363 (658)
Q Consensus 320 ~~l~~~f~V~~~Ptlvlfk~~~~~p~~y~g-----------~~~~~~L~~fi~~~ 363 (658)
..+.+.|+|...|+++++...+. ++|.| ..+.+.|.+.|+..
T Consensus 133 ~~~~~~~~v~~~P~~~liD~~G~--i~~~g~~d~~~~~~~~~~~~~~l~~~i~~l 185 (218)
T 3u5r_E 133 QSVAKAYGAACTPDFFLYDRERR--LVYHGQFDDARPGNGKDVTGADLRAAVDAV 185 (218)
T ss_dssp CHHHHHHTCCEESEEEEECTTCB--EEEEECSSSCCTTSCCCCCCHHHHHHHHHH
T ss_pred cHHHHHcCCCCCCeEEEECCCCc--EEEeccccccccccccccCHHHHHHHHHHH
Confidence 46889999999999999954432 34543 23467788877763
No 489
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=48.09 E-value=13 Score=33.39 Aligned_cols=33 Identities=12% Similarity=0.219 Sum_probs=22.9
Q ss_pred CCCCEEEEEeCCCCCeeeecCCC--ChHHHHHHHHh
Q 006171 329 ESAPAIVFLKDPGVKPVVYYGSF--NNSRLSEVMEQ 362 (658)
Q Consensus 329 ~~~Ptlvlfk~~~~~p~~y~g~~--~~~~L~~fi~~ 362 (658)
...|+++++. .+.....+.|.. +.+.|.+.|+.
T Consensus 136 ~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~~ 170 (172)
T 2k6v_A 136 DHTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQA 170 (172)
T ss_dssp EECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHHH
T ss_pred ecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHH
Confidence 4579999998 554433456666 77788887764
No 490
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=48.00 E-value=24 Score=32.85 Aligned_cols=43 Identities=5% Similarity=0.066 Sum_probs=29.8
Q ss_pred HhHHhhcCCC-----CCCEEEEEeCCCCCeeeecCCC----ChHHHHHHHHh
Q 006171 320 SIWWNTFEVE-----SAPAIVFLKDPGVKPVVYYGSF----NNSRLSEVMEQ 362 (658)
Q Consensus 320 ~~l~~~f~V~-----~~Ptlvlfk~~~~~p~~y~g~~----~~~~L~~fi~~ 362 (658)
..+.+.|++. ..|+.+++..++.....+.|.. +.++|.+.++.
T Consensus 107 ~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 158 (198)
T 1zof_A 107 KSISRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDA 158 (198)
T ss_dssp SHHHHHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHH
T ss_pred hHHHHHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHH
Confidence 4688899998 8999999976554333345544 45677777765
No 491
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=47.59 E-value=11 Score=31.58 Aligned_cols=40 Identities=10% Similarity=0.065 Sum_probs=24.8
Q ss_pred HhHHhhcCCCCCCEEEEEeCCCCCee-eecCCC---ChHHHHHHHHhh
Q 006171 320 SIWWNTFEVESAPAIVFLKDPGVKPV-VYYGSF---NNSRLSEVMEQN 363 (658)
Q Consensus 320 ~~l~~~f~V~~~Ptlvlfk~~~~~p~-~y~g~~---~~~~L~~fi~~~ 363 (658)
..+.++|++.+.|++ |.++ +.+ .+.|.. +...|.++++..
T Consensus 63 ~~l~~~~~v~~~Pt~--~~~g--~~v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 63 SALAHWTGRGTVPNV--FIGG--KQIGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp HHHHHHHSCCSSCEE--EETT--EEEECHHHHHHHHHTTCHHHHHHHT
T ss_pred HHHHHHhCCCCcCEE--EECC--EEECChHHHHHHHhCChHHHHHHHc
Confidence 468999999999998 3343 222 122222 445677777763
No 492
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=44.03 E-value=5.6 Score=40.21 Aligned_cols=27 Identities=11% Similarity=-0.010 Sum_probs=22.8
Q ss_pred CCCcEEEEEeccCCCCCCCChHHHHHH
Q 006171 152 DSKPWLIQVYSDGSYLCGQFSGAWKTI 178 (658)
Q Consensus 152 ~~~~~lV~FYapwC~~Ck~l~P~w~~~ 178 (658)
+.+..++.|.-|.|++|+++.+..++.
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~ 172 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDH 172 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHH
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHH
Confidence 367899999999999999998776643
No 493
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=43.83 E-value=17 Score=34.35 Aligned_cols=42 Identities=17% Similarity=0.141 Sum_probs=32.7
Q ss_pred HHHhhCCCCcccceeeeeEEEEcCCCCCCCCCcccccCCCCHhHHHHHHHHh
Q 006171 201 HLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (658)
Q Consensus 201 ~Lc~k~~i~k~f~V~~yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Lv~fv~k~ 252 (658)
.+++++| |.|.||++++.+|.. ...+.|..+.+.+.+.+.+.
T Consensus 167 ~~a~~~g------v~g~Pt~~i~~~G~~----~~~~~G~~~~~~l~~~l~~~ 208 (216)
T 2in3_A 167 QRVAQWG------ISGFPALVVESGTDR----YLITTGYRPIEALRQLLDTW 208 (216)
T ss_dssp HHHHHTT------CCSSSEEEEEETTEE----EEEESSCCCHHHHHHHHHHH
T ss_pred HHHHHcC------CcccceEEEEECCEE----EEeccCCCCHHHHHHHHHHH
Confidence 4678888 889999998877732 12468989999999988776
No 494
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=41.97 E-value=47 Score=30.82 Aligned_cols=43 Identities=16% Similarity=-0.021 Sum_probs=27.4
Q ss_pred HHhhccCceEEEEEecccccHhHHhhc--------CCCCCCEEEEEeCCCCCee
Q 006171 300 SRNYWAYASFAFVLWREEESSIWWNTF--------EVESAPAIVFLKDPGVKPV 345 (658)
Q Consensus 300 A~~~~~~~~f~~v~~~~~~s~~l~~~f--------~V~~~Ptlvlfk~~~~~p~ 345 (658)
+..+.+.+.+..|. ..+.+++.+.| |+.+.|++++|.+++ +++
T Consensus 68 a~~l~~~fv~ikVD--~de~~~l~~~y~~~~q~~~gv~g~Pt~v~l~~dG-~~v 118 (173)
T 3ira_A 68 AGLMNEAFVSIKVD--REERPDIDNIYMTVCQIILGRGGWPLNIIMTPGK-KPF 118 (173)
T ss_dssp HHHHHHHCEEEEEE--TTTCHHHHHHHHHHHHHHHSCCCSSEEEEECTTS-CEE
T ss_pred HHHHHhcCceeeeC--CcccCcHHHHHHHHHHHHcCCCCCcceeeECCCC-Cce
Confidence 34343344445554 33346788888 999999999997544 444
No 495
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=47.16 E-value=5.7 Score=34.51 Aligned_cols=22 Identities=27% Similarity=0.435 Sum_probs=18.3
Q ss_pred HhHHhhcCCCCCCEEEEEeCCC
Q 006171 320 SIWWNTFEVESAPAIVFLKDPG 341 (658)
Q Consensus 320 ~~l~~~f~V~~~Ptlvlfk~~~ 341 (658)
..+++.|+|...|+++++...+
T Consensus 98 ~~~~~~~~v~~~P~~~lid~~G 119 (143)
T 2lus_A 98 SNVTAKYGITGIPALVIVKKDG 119 (143)
Confidence 4688999999999999997544
No 496
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=40.23 E-value=43 Score=30.98 Aligned_cols=44 Identities=9% Similarity=-0.059 Sum_probs=30.4
Q ss_pred HhHHhhcCCC-----CCCEEEEEeCCCCCeeeecCCC----ChHHHHHHHHhh
Q 006171 320 SIWWNTFEVE-----SAPAIVFLKDPGVKPVVYYGSF----NNSRLSEVMEQN 363 (658)
Q Consensus 320 ~~l~~~f~V~-----~~Ptlvlfk~~~~~p~~y~g~~----~~~~L~~fi~~~ 363 (658)
..+.+.|++. ..|+++++...+.....+.|.. +.+.|.+.++..
T Consensus 116 ~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 168 (195)
T 2bmx_A 116 RELSQAAGVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDAL 168 (195)
T ss_dssp SHHHHHHTCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred hHHHHHhCCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 4578889998 8999999965544333344543 567788887763
No 497
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=40.04 E-value=50 Score=30.16 Aligned_cols=43 Identities=14% Similarity=0.159 Sum_probs=29.1
Q ss_pred HhHHhhcCCC------CCCEEEEEeCCCCCeeeecCCC----ChHHHHHHHHh
Q 006171 320 SIWWNTFEVE------SAPAIVFLKDPGVKPVVYYGSF----NNSRLSEVMEQ 362 (658)
Q Consensus 320 ~~l~~~f~V~------~~Ptlvlfk~~~~~p~~y~g~~----~~~~L~~fi~~ 362 (658)
..+.+.|++. ..|+++++...+.....+.|.. +.+.|.+.++.
T Consensus 102 ~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 154 (187)
T 1we0_A 102 QTISRQFDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKA 154 (187)
T ss_dssp CHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHH
T ss_pred hHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 4588899998 7999999965443333344543 56677777765
No 498
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=39.62 E-value=1.4e+02 Score=27.04 Aligned_cols=35 Identities=9% Similarity=0.105 Sum_probs=23.2
Q ss_pred CCCCC---EEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 328 VESAP---AIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 328 V~~~P---tlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
+...| +.+++...+.....+.|..+.+.|.+.|+.
T Consensus 143 ~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~ 180 (187)
T 3dwv_A 143 TKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIP 180 (187)
T ss_dssp SSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHH
T ss_pred CCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHH
Confidence 33456 777775555443446788888888888765
No 499
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=44.47 E-value=6.7 Score=35.01 Aligned_cols=42 Identities=10% Similarity=0.196 Sum_probs=24.6
Q ss_pred HhHHhhcCC--CCCCEEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 320 SIWWNTFEV--ESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 320 ~~l~~~f~V--~~~Ptlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
..+.+.|++ .+.|+++++...+.....+.| .+..++.++++.
T Consensus 102 ~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~~l~~ 145 (159)
T 2ls5_A 102 ADIFAKYALRDAGITRNVLIDREGKIVKLTRL-YNEEEFASLVQQ 145 (159)
Confidence 456777874 459999998544432222344 455556666554
No 500
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=38.01 E-value=50 Score=30.33 Aligned_cols=37 Identities=5% Similarity=0.032 Sum_probs=24.3
Q ss_pred cCCCCCC------EEEEEeCCCCCeeeecCCCChHHHHHHHHh
Q 006171 326 FEVESAP------AIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (658)
Q Consensus 326 f~V~~~P------tlvlfk~~~~~p~~y~g~~~~~~L~~fi~~ 362 (658)
|++...| +.+++...+.....+.|..+.+.|.+.|+.
T Consensus 140 ~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 182 (190)
T 2vup_A 140 PGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIP 182 (190)
T ss_dssp CCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHH
T ss_pred CCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHH
Confidence 3666677 667765544433346788888888887765
Done!