BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006173
(658 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C7A2|Y3236_ARATH Ankyrin repeat-containing protein At3g12360 OS=Arabidopsis thaliana
GN=At3g12360 PE=2 SV=1
Length = 590
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 88/180 (48%), Gaps = 16/180 (8%)
Query: 460 VENCVHPTLQDQLNDKDKTPREV--FTKEHEKLVEEGEKWMKDTAGSCSVVATLIMTIVF 517
++N VH QL +T + V +KE KL EG + + S +VVA L T+ F
Sbjct: 382 IKNDVHI----QLEQTKRTNKNVHNISKELRKLHREG---INNATNSVTVVAVLFATVAF 434
Query: 518 AAAITVPGGSDSRGMPNFLEEPSFTIFGISNALALFSSVISVLIFLGILTSRFSEEDFLV 577
AA TVPGG ++ G + SF IF I NALALF+S+ V++ + ++ E +V
Sbjct: 435 AAIFTVPGGDNNDGSAVVVGRASFKIFFIFNALALFTSLAVVVVQITLVRGETKAEKRVV 494
Query: 578 SLPRKLIIGLITLFFSIACLMVAFAATVHITQFHPWKWVI-IPTALLGFLPVFLFATLQF 636
+ KL ++ + C VAF A+ +I +W + T + G + + T+ +
Sbjct: 495 EVINKL------MWLASMCTSVAFLASSYIVVGRKNEWAAELVTVVGGVIMAGVLGTMTY 548
>sp|Q9ZU96|Y2168_ARATH Ankyrin repeat-containing protein At2g01680 OS=Arabidopsis thaliana
GN=At2g01680 PE=1 SV=1
Length = 532
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 113/273 (41%), Gaps = 28/273 (10%)
Query: 369 EIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPNIYPFFMANIDEKRI 428
E+V I+ + + L +++ G +A R ++ +++ F I + N E +
Sbjct: 210 EVVEEILQADYTI-LNERDRKGNTALHIATRKARPQITSLLLTFTAIEVNAINNQKETAM 268
Query: 429 NI----------LHIAAMSVPSTEVPGAALQMQRELQWFKAVENCVHPTLQDQLNDKDKT 478
++ L I V + G + + E + K + + +Q QL +KT
Sbjct: 269 DLADKLQYSESALEINEALVEAGAKHGRFIGREDEARALKRAVSDIKHEVQSQLLQNEKT 328
Query: 479 PREV--FTKEHEKLVEEGEKWMKDTAGSCSVVATLIMTIVFAAAITVPG-----GSDSRG 531
R V KE KL E +++T S +VVA L +I F A +PG GS G
Sbjct: 329 NRRVSGIAKELRKLHREA---VQNTTNSITVVAVLFASIAFLAIFNLPGQYFTEGSHV-G 384
Query: 532 MPNFLEEPSFTIFGISNALALFSSVISVLIFLGILTSRFSEEDFLVSLPRKLIIGLITLF 591
N F +F + NA +LF S+ V++ + ++ + +VS+ KL ++
Sbjct: 385 QANIAGRTGFRVFCLLNATSLFISLAVVVVQITLVAWDTRAQKKVVSVVNKL------MW 438
Query: 592 FSIACLMVAFAATVHITQFHPWKWVIIPTALLG 624
+ AC AF A W+ I LLG
Sbjct: 439 AACACTFGAFLAIAFAVVGKGNSWMAITITLLG 471
>sp|Q8VHS6|ASB15_MOUSE Ankyrin repeat and SOCS box protein 15 OS=Mus musculus GN=Asb15
PE=2 SV=2
Length = 583
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 24/189 (12%)
Query: 8 KAQVQSNEGNNKTPKAKDEKIIKDIDSYKQVTRYILENDWKG---LEDYIMSKTPNAL-T 63
K VQ ++ N K +A + I ++ Y Q + E D KG L + ++ L T
Sbjct: 35 KRLVQLSDQNRKLVEAIRQGRIFELQEYVQYKYALEEADEKGWFPLHEAVVQPIQQILET 94
Query: 64 CIIVDQSSIFEFIVGIPDVPATL------VDKLLSKVPRNCLQNFARDEGSEYMEYAVST 117
+ +++EF + P TL V+ + + + + N D+G + A+
Sbjct: 95 VLDASYKTLWEFKTCDGETPLTLAVKAGLVENVKTLLDKGVWPNTKNDKGETPLLIAIKR 154
Query: 118 GKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTR 177
G ++++ L+ YN L D P +K +H AAK G++D + LL R
Sbjct: 155 GSYDMVSALIKYNTSL--------DQPCVKRWS-----AMHEAAKQGRKDIIT-LLLNHR 200
Query: 178 EPLDGRQGF 186
+ R GF
Sbjct: 201 GNVHLRDGF 209
>sp|Q6AWW5|Y5262_ARATH Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana
GN=At5g02620 PE=1 SV=1
Length = 524
Score = 38.1 bits (87), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 31/151 (20%)
Query: 468 LQDQLNDKDKTPREV--FTKEHEKLVEEGEKWMKDTAGSCSVVATLIMTIVFAAAITVPG 525
+ QL +T RE+ K K+ EG + + S ++VA LI T+ FAA VPG
Sbjct: 317 VHTQLEQTGRTRREIQGIAKRVNKMHTEG---LNNAINSTTLVAILIATVAFAAIFNVPG 373
Query: 526 G--------------SDSRGMPNFLEEPSFTIFGISNALALFSSVISVLIFLGILTSRFS 571
++R P P F IF + ++ ALF S+ +
Sbjct: 374 QYTDDPKDVPPGYSLGEARAAP----RPEFLIFVVFDSFALFISLAV--------VVVQT 421
Query: 572 EEDFLVSLPRKLIIGLITLFFSIACLMVAFA 602
+ +K ++ +I +AC+M++ A
Sbjct: 422 SVVVIERRAKKQMMAIINKLMWMACIMISVA 452
>sp|Q9SQK3|EM506_ARATH Ankyrin repeat domain-containing protein EMB506, chloroplastic
OS=Arabidopsis thaliana GN=EMB506 PE=1 SV=1
Length = 315
Score = 36.6 bits (83), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 25/147 (17%)
Query: 68 DQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLM 127
+Q+++ + I+G + ++ LL K LQ+ RD G+ + YAV G L + L
Sbjct: 185 NQTALHKAIIGKKEA---VISHLLRKGANPHLQD--RD-GAAPIHYAVQVGALQTVKLLF 238
Query: 128 GYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLP----KTREPLDGR 183
YN D N+ D E P+H+A ++ RD + LL KTR DG+
Sbjct: 239 KYNV-----------DVNVADNEG--WTPLHIAVQSRNRDITKILLTNGADKTRRTKDGK 285
Query: 184 QGFVL-LKFLIDSNLFDMALALLKCHP 209
L L F D +D+ + LLK P
Sbjct: 286 LALDLALCFGRDFKSYDL-VKLLKIMP 311
>sp|Q5UQV3|YL371_MIMIV Putative ankyrin repeat protein L371 OS=Acanthamoeba polyphaga
mimivirus GN=MIMI_L371 PE=4 SV=1
Length = 765
Score = 36.2 bits (82), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 10/134 (7%)
Query: 42 ILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQN 101
I N K DYI TP+ + I D++ + I +T++ KL+ R L
Sbjct: 32 IKSNKEKEFMDYINQLTPDQIDINIRDENGNYMIFFAIIMNSSTILKKLIKYGAR--LDV 89
Query: 102 FARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAA 161
F EG+ M Y + G +I L+ Y+ ++ I + NIKD + +P+ A
Sbjct: 90 FDT-EGNSVMYYPIKFGYYEIIDVLIDYDSKIIGISL-----INIKDHKGS--VPLFYAI 141
Query: 162 KAGKRDAVRHLLPK 175
K + A++ LL K
Sbjct: 142 KYRNKYALQQLLSK 155
>sp|Q05753|AKRP_ARATH Ankyrin repeat domain-containing protein, chloroplastic
OS=Arabidopsis thaliana GN=AKRP PE=1 SV=2
Length = 435
Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 13/71 (18%)
Query: 105 DEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAG 164
DEG+ M YAV T I L+ YN +I +++D P+H+A +A
Sbjct: 324 DEGATLMHYAVQTASAPTIKLLLLYNA-------------DINAQDRDGWTPLHVAVQAR 370
Query: 165 KRDAVRHLLPK 175
+ D V+ LL K
Sbjct: 371 RSDIVKLLLIK 381
>sp|Q02989|LITA_LATTR Alpha-latroinsectotoxin-Lt1a (Fragment) OS=Latrodectus
tredecimguttatus PE=1 SV=1
Length = 1411
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 126 LMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPK 175
++G NEE+P VEK N+ D+ + P+H AA GK + R LL +
Sbjct: 778 IIGKNEEIPFFLVEK--GANVNDKTNSGVTPLHFAAGLGKANIFRLLLSR 825
>sp|Q4UMH6|Y381_RICFE Putative ankyrin repeat protein RF_0381 OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=RF_0381 PE=4 SV=1
Length = 1179
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 15/121 (12%)
Query: 101 NFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMA 160
N D+G + YAV +G LNL++ L + K D N K + +L H A
Sbjct: 991 NTKTDDGLTALHYAVESGNLNLVSLL-----------IHKGIDVNAKTNSGETIL--HFA 1037
Query: 161 AKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLIDS-NLFDMALALLKCHPMIARADIGE 218
G D V L+ + + G L + ++S NL ++L ++ + A+ + GE
Sbjct: 1038 VDLGSLDLVSLLMVRGADVNAKTDDGLTALHYAVESDNLALVSLLMVYGADVNAKNNSGE 1097
Query: 219 T 219
T
Sbjct: 1098 T 1098
>sp|Q10311|YD58_SCHPO Ankyrin repeat-containing protein C6C3.08 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC6C3.08 PE=4 SV=1
Length = 234
Score = 34.7 bits (78), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 16/125 (12%)
Query: 107 GSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKR 166
G + YA G+L+++ L EL I+ ++ P+H AA GK
Sbjct: 107 GQTCLHYAAGKGRLSIVQLLCDKAPEL------------IRKKDLQGQTPLHRAAAVGKI 154
Query: 167 DAVRHLLPKTREPLDGRQ--GFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILE 224
V++L+ + R PL+ GF L F + D+ + L++ R D E LE
Sbjct: 155 QVVKYLISQ-RAPLNTSDSYGFTPLHFALAEGHPDVGVELVRAGADTLRKD-SENHTALE 212
Query: 225 SLSKR 229
R
Sbjct: 213 VCPDR 217
>sp|Q9INI3|VP4_BAVJK Outer capsid protein VP4 OS=Banna virus (strain
Indonesia/JKT-6423/1980) PE=4 SV=1
Length = 576
Score = 34.3 bits (77), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 368 YEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPNIYPFFMANIDEKR 427
Y +V+ +N W E DG+ I + +V+H+ EK+ + N + F N D +
Sbjct: 494 YSVVVDTLNEETKWYCEIIGIDGHLIIEKSVQHKPEKILELTVNDDGLTSFKGKNHDRLK 553
Query: 428 INI 430
+ +
Sbjct: 554 LKV 556
>sp|Q96Q27|ASB2_HUMAN Ankyrin repeat and SOCS box protein 2 OS=Homo sapiens GN=ASB2 PE=1
SV=1
Length = 587
Score = 33.1 bits (74), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 151 KDDLLPVHMAAKAGKRDAVRHLLPKTREPLDGRQGFVLLKFLIDSNLFDMALALL 205
KD LLP+H+A+K G V+ LLP T R G L + N ++ ALL
Sbjct: 287 KDGLLPLHIASKKGNYRIVQMLLPVTSRTRIRRSGVSPLHLAAERNHDEVLEALL 341
>sp|Q25338|LITD_LATTR Delta-latroinsectotoxin-Lt1a OS=Latrodectus tredecimguttatus PE=1
SV=1
Length = 1214
Score = 33.1 bits (74), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 24/87 (27%)
Query: 111 MEYAVSTGKLNLITTLM------------GYNE----------ELPNIKVEKKDDPNIKD 148
+ AVSTG++N+I L+ GY E+ + +E D I+
Sbjct: 745 LHLAVSTGQINIIKELLKRGSNIEEKTGEGYTSLHIAAMRKEPEIAVVLIENGAD--IEA 802
Query: 149 EEKDDLLPVHMAAKAGKRDAVRHLLPK 175
D+L P+H AAK G++ V +LL K
Sbjct: 803 RSADNLTPLHSAAKIGRKSTVLYLLEK 829
>sp|G5E8K5|ANK3_MOUSE Ankyrin-3 OS=Mus musculus GN=Ank3 PE=1 SV=1
Length = 1961
Score = 32.7 bits (73), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 20/82 (24%)
Query: 118 GKLNLITTLM--GYNEELPNIKVEK------------------KDDPNIKDEEKDDLLPV 157
G +N+++ LM G + N++ E +D ++ + KDD P+
Sbjct: 427 GHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDDQTPL 486
Query: 158 HMAAKAGKRDAVRHLLPKTREP 179
H++A+ GK D V+ LL + P
Sbjct: 487 HISARLGKADIVQQLLQQGASP 508
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 244,603,847
Number of Sequences: 539616
Number of extensions: 10503624
Number of successful extensions: 29705
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 29666
Number of HSP's gapped (non-prelim): 58
length of query: 658
length of database: 191,569,459
effective HSP length: 124
effective length of query: 534
effective length of database: 124,657,075
effective search space: 66566878050
effective search space used: 66566878050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)