Query 006173
Match_columns 658
No_of_seqs 464 out of 4135
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 17:57:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006173.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006173hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 1.3E-43 4.5E-48 383.3 30.4 376 29-486 9-387 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 9E-41 3.1E-45 361.0 28.3 347 29-440 42-390 (437)
3 4g8k_A 2-5A-dependent ribonucl 100.0 5.3E-39 1.8E-43 334.8 27.6 283 30-440 21-314 (337)
4 1wdy_A 2-5A-dependent ribonucl 100.0 9.3E-39 3.2E-43 323.7 27.9 270 32-424 3-283 (285)
5 3utm_A Tankyrase-1; tankyrase, 100.0 2E-38 7E-43 331.6 28.2 284 26-435 16-321 (351)
6 3d9h_A CDNA FLJ77766, highly s 100.0 1.2E-37 4.1E-42 316.3 22.9 243 32-437 13-265 (285)
7 3utm_A Tankyrase-1; tankyrase, 100.0 1.7E-37 5.9E-42 324.5 22.4 307 67-494 21-331 (351)
8 2fo1_E LIN-12 protein; beta-ba 100.0 4.2E-38 1.4E-42 332.5 13.5 285 33-440 36-359 (373)
9 2xai_A ASB-9, ankyrin repeat a 100.0 6.5E-37 2.2E-41 306.8 20.0 85 352-440 163-251 (261)
10 1wdy_A 2-5A-dependent ribonucl 100.0 6.9E-36 2.3E-40 302.6 23.8 248 69-440 4-266 (285)
11 1oy3_D Transcription factor in 100.0 7.2E-36 2.5E-40 302.4 18.3 251 66-440 5-271 (282)
12 2fo1_E LIN-12 protein; beta-ba 100.0 6.8E-36 2.3E-40 315.5 18.1 260 29-414 89-370 (373)
13 3ljn_A Hypothetical protein; a 100.0 1E-35 3.5E-40 313.3 19.4 269 27-440 13-302 (364)
14 1yyh_A HN1;, notch 1, ankyrin 100.0 1E-35 3.5E-40 296.7 18.1 220 99-440 3-236 (253)
15 2dzn_A Probable 26S proteasome 100.0 7.2E-35 2.5E-39 285.4 21.6 212 70-438 2-219 (228)
16 1s70_B 130 kDa myosin-binding 100.0 7E-36 2.4E-40 305.4 14.5 264 40-437 4-275 (299)
17 2xai_A ASB-9, ankyrin repeat a 100.0 5.4E-35 1.8E-39 292.9 20.3 241 69-485 2-247 (261)
18 1yyh_A HN1;, notch 1, ankyrin 100.0 7E-35 2.4E-39 290.6 20.5 228 30-414 6-247 (253)
19 3b7b_A Euchromatic histone-lys 100.0 1.8E-34 6.1E-39 284.5 22.7 213 67-439 8-222 (237)
20 3d9h_A CDNA FLJ77766, highly s 100.0 2.8E-34 9.6E-39 291.5 22.1 243 67-485 12-264 (285)
21 1k1a_A B-cell lymphoma 3-encod 100.0 2.4E-34 8.2E-39 284.2 20.1 216 66-439 5-228 (241)
22 4g8k_A 2-5A-dependent ribonucl 100.0 1.4E-33 4.8E-38 293.7 25.4 263 33-415 58-326 (337)
23 1oy3_D Transcription factor in 100.0 2.3E-34 7.9E-39 291.3 18.6 253 99-488 2-270 (282)
24 4b93_B Ankyrin repeat domain-c 100.0 1.8E-34 6.2E-39 289.8 15.0 214 68-439 9-230 (269)
25 3aji_A 26S proteasome non-ATPa 100.0 1.3E-33 4.4E-38 277.2 20.5 212 69-439 5-217 (231)
26 3aji_A 26S proteasome non-ATPa 100.0 7.5E-34 2.6E-38 278.8 18.6 223 34-414 6-229 (231)
27 3ljn_A Hypothetical protein; a 100.0 2.7E-34 9.4E-39 302.4 16.2 215 65-440 15-257 (364)
28 4b93_B Ankyrin repeat domain-c 100.0 3.9E-34 1.3E-38 287.4 15.9 227 26-411 3-237 (269)
29 1k1a_A B-cell lymphoma 3-encod 100.0 1E-33 3.6E-38 279.5 17.4 228 30-414 5-240 (241)
30 2dzn_A Probable 26S proteasome 100.0 7.2E-33 2.5E-37 271.1 20.7 221 34-412 2-227 (228)
31 3b7b_A Euchromatic histone-lys 100.0 8.5E-33 2.9E-37 272.4 20.6 225 29-411 6-231 (237)
32 3eu9_A Huntingtin-interacting 100.0 5.3E-32 1.8E-36 266.8 22.2 228 66-414 5-234 (240)
33 2f8y_A Notch homolog 1, transl 100.0 4.6E-32 1.6E-36 264.5 19.1 214 45-415 2-216 (223)
34 3kea_A K1L; tropism, ANK repea 100.0 5E-32 1.7E-36 274.9 19.0 225 41-439 6-233 (285)
35 1sw6_A Regulatory protein SWI6 100.0 2E-33 6.9E-38 291.0 7.4 281 44-438 29-327 (327)
36 1ikn_D Protein (I-kappa-B-alph 100.0 1.5E-32 5.1E-37 270.6 11.0 218 66-439 4-231 (236)
37 2f8y_A Notch homolog 1, transl 100.0 4.6E-31 1.6E-35 257.4 17.3 202 81-440 1-204 (223)
38 3kea_A K1L; tropism, ANK repea 100.0 4E-31 1.4E-35 268.2 15.6 160 27-208 24-184 (285)
39 2rfa_A Transient receptor pote 100.0 1.5E-30 5.2E-35 255.4 18.7 129 69-208 2-144 (232)
40 1ikn_D Protein (I-kappa-B-alph 100.0 3.7E-31 1.3E-35 260.6 12.6 219 104-485 5-228 (236)
41 1s70_B 130 kDa myosin-binding 100.0 1.5E-30 5E-35 265.9 16.7 250 29-411 35-286 (299)
42 3eu9_A Huntingtin-interacting 100.0 9.2E-30 3.2E-34 250.7 20.6 179 32-230 7-188 (240)
43 3hra_A Ankyrin repeat family p 100.0 8.8E-30 3E-34 244.1 19.6 147 67-229 2-150 (201)
44 2rfa_A Transient receptor pote 100.0 1.4E-29 4.8E-34 248.6 20.1 170 34-209 3-182 (232)
45 2pnn_A Transient receptor pote 100.0 2.8E-30 9.5E-35 260.4 11.7 159 66-230 9-195 (273)
46 3hra_A Ankyrin repeat family p 100.0 7.3E-29 2.5E-33 237.6 20.3 102 104-217 2-104 (201)
47 2etb_A Transient receptor pote 100.0 1.8E-29 6.3E-34 251.8 12.6 154 69-228 1-181 (256)
48 4gpm_A Engineered protein OR26 100.0 1.8E-28 6.2E-33 227.5 17.5 156 36-211 6-162 (169)
49 2pnn_A Transient receptor pote 100.0 6.3E-29 2.2E-33 250.4 14.7 175 28-207 7-215 (273)
50 1sw6_A Regulatory protein SWI6 100.0 2.2E-29 7.5E-34 260.6 9.7 275 68-485 21-325 (327)
51 2etb_A Transient receptor pote 100.0 3.5E-28 1.2E-32 242.5 16.2 172 34-208 2-204 (256)
52 3jxi_A Vanilloid receptor-rela 100.0 3.9E-28 1.3E-32 242.7 13.3 159 67-230 2-187 (260)
53 2aja_A Ankyrin repeat family p 99.9 3.6E-29 1.2E-33 261.8 4.1 167 31-230 62-236 (376)
54 4gpm_A Engineered protein OR26 99.9 5.5E-27 1.9E-31 217.4 18.0 154 109-414 6-160 (169)
55 4hbd_A KN motif and ankyrin re 99.9 1.1E-27 3.8E-32 241.6 12.0 195 68-414 74-274 (276)
56 3jxi_A Vanilloid receptor-rela 99.9 8.7E-28 3E-32 240.1 10.6 206 32-249 3-248 (260)
57 3v30_A DNA-binding protein rfx 99.9 1E-26 3.6E-31 216.8 14.7 168 35-222 3-171 (172)
58 2aja_A Ankyrin repeat family p 99.9 6.7E-28 2.3E-32 252.2 5.6 174 30-230 88-265 (376)
59 2vge_A RELA-associated inhibit 99.9 7.4E-28 2.5E-32 235.6 3.8 200 88-444 2-205 (229)
60 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.2E-25 4.3E-30 207.2 16.6 155 34-209 5-161 (162)
61 3v30_A DNA-binding protein rfx 99.9 4.7E-26 1.6E-30 212.4 13.7 169 107-430 2-171 (172)
62 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.6E-25 8.8E-30 203.7 17.9 154 34-207 2-155 (156)
63 2y1l_E Darpin-8.4; hydrolase-i 99.9 2.3E-25 7.8E-30 207.1 17.4 157 31-207 11-168 (169)
64 3v31_A Ankyrin repeat family A 99.9 8E-26 2.8E-30 209.7 13.4 158 34-211 3-161 (167)
65 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.8E-25 6.2E-30 206.1 15.2 61 353-414 101-161 (162)
66 2rfm_A Putative ankyrin repeat 99.9 1.5E-25 5.3E-30 212.9 14.2 158 30-207 31-189 (192)
67 3twr_A Tankyrase-2; ankyrin re 99.9 1.9E-25 6.6E-30 206.6 14.3 158 31-208 5-163 (165)
68 1awc_B Protein (GA binding pro 99.9 5.3E-25 1.8E-29 201.0 16.4 150 34-204 2-152 (153)
69 2rfm_A Putative ankyrin repeat 99.9 4.5E-25 1.5E-29 209.7 15.9 126 67-209 32-158 (192)
70 4hbd_A KN motif and ankyrin re 99.9 4.6E-26 1.6E-30 229.7 9.5 181 34-232 76-263 (276)
71 3v31_A Ankyrin repeat family A 99.9 6.4E-25 2.2E-29 203.6 15.5 122 69-207 2-124 (167)
72 3f6q_A Integrin-linked protein 99.9 5.3E-25 1.8E-29 206.7 13.5 159 34-211 5-164 (179)
73 2y1l_E Darpin-8.4; hydrolase-i 99.9 2.3E-24 7.9E-29 200.3 17.0 59 353-413 111-169 (169)
74 3twr_A Tankyrase-2; ankyrin re 99.9 1.2E-24 4.2E-29 201.2 12.7 92 104-207 5-97 (165)
75 3f6q_A Integrin-linked protein 99.9 2.1E-24 7.2E-29 202.6 14.0 69 353-427 103-171 (179)
76 2vge_A RELA-associated inhibit 99.9 3.1E-26 1.1E-30 224.0 1.3 181 29-231 16-200 (229)
77 1ycs_B 53BP2, P53BP2; ankyrin 99.9 4E-25 1.4E-29 217.9 9.2 184 104-440 2-194 (239)
78 1awc_B Protein (GA binding pro 99.9 7.3E-24 2.5E-28 193.4 16.3 54 354-409 99-152 (153)
79 1ycs_B 53BP2, P53BP2; ankyrin 99.9 7E-25 2.4E-29 216.1 8.3 181 30-231 1-193 (239)
80 1bd8_A P19INK4D CDK4/6 inhibit 99.9 9.9E-24 3.4E-28 193.1 12.5 143 70-231 2-145 (156)
81 3t8k_A Uncharacterized protein 99.9 4.5E-24 1.6E-28 201.2 10.1 155 32-207 4-176 (186)
82 1d9s_A Cyclin-dependent kinase 99.9 2.1E-22 7.1E-27 179.8 11.8 125 67-208 9-134 (136)
83 1bi7_B P16INK4A, MTS1, multipl 99.9 1.1E-22 3.9E-27 186.2 8.6 137 33-190 11-149 (156)
84 2jab_A H10-2-G3; HER2, darpin, 99.9 7.6E-22 2.6E-26 176.1 13.1 131 26-176 6-136 (136)
85 1bi7_B P16INK4A, MTS1, multipl 99.9 5.1E-22 1.7E-26 181.8 11.9 143 67-228 9-153 (156)
86 3ui2_A Signal recognition part 99.9 7.3E-23 2.5E-27 202.2 5.8 144 64-229 9-154 (244)
87 1d9s_A Cyclin-dependent kinase 99.9 4.4E-22 1.5E-26 177.7 9.8 128 29-177 7-135 (136)
88 3deo_A Signal recognition part 99.9 1.3E-22 4.4E-27 191.1 5.9 137 77-229 6-153 (183)
89 2jab_A H10-2-G3; HER2, darpin, 99.9 9.7E-22 3.3E-26 175.4 11.1 124 67-207 11-135 (136)
90 1n0r_A 4ANK, 4 ankyrin repeats 99.9 3.4E-21 1.2E-25 168.9 13.4 124 69-209 1-125 (126)
91 3t8k_A Uncharacterized protein 99.8 1.4E-21 4.7E-26 184.1 7.9 144 70-232 6-167 (186)
92 3deo_A Signal recognition part 99.8 1.5E-20 5.1E-25 176.9 12.9 140 31-207 41-181 (183)
93 1n0r_A 4ANK, 4 ankyrin repeats 99.8 1.6E-20 5.4E-25 164.6 10.9 124 34-177 2-125 (126)
94 3c5r_A BARD-1, BRCA1-associate 99.8 3.6E-21 1.2E-25 171.9 6.7 125 66-207 6-131 (137)
95 3ui2_A Signal recognition part 99.8 2E-20 6.7E-25 184.8 12.6 141 31-208 42-183 (244)
96 2b0o_E UPLC1; arfgap, structur 99.8 1.8E-20 6.1E-25 190.8 12.3 138 70-231 151-298 (301)
97 3aaa_C Myotrophin, protein V-1 99.8 1.5E-20 5E-25 164.5 9.1 114 67-197 4-118 (123)
98 2b0o_E UPLC1; arfgap, structur 99.8 1E-20 3.4E-25 192.6 9.2 141 34-198 151-299 (301)
99 3ehr_A Osteoclast-stimulating 99.8 2.4E-20 8E-25 181.4 7.0 126 67-209 70-197 (222)
100 3c5r_A BARD-1, BRCA1-associate 99.8 3.4E-20 1.2E-24 165.5 6.4 128 30-177 6-133 (137)
101 3aaa_C Myotrophin, protein V-1 99.8 1.7E-19 6E-24 157.6 9.7 118 32-169 5-122 (123)
102 1dcq_A PYK2-associated protein 99.8 1.5E-19 5.1E-24 181.8 9.6 124 71-209 131-262 (278)
103 3ehr_A Osteoclast-stimulating 99.8 1.4E-19 4.8E-24 175.9 8.0 128 32-178 71-198 (222)
104 1n0q_A 3ANK, 3 ankyrin repeats 99.8 8.8E-19 3E-23 144.9 9.5 92 69-177 1-92 (93)
105 1dcq_A PYK2-associated protein 99.8 2.7E-18 9.3E-23 172.6 12.7 128 32-178 128-263 (278)
106 3jue_A Arfgap with coiled-coil 99.8 2.3E-18 7.9E-23 179.2 12.4 144 69-229 198-347 (368)
107 3jue_A Arfgap with coiled-coil 99.7 2.4E-18 8.3E-23 179.1 11.5 146 29-194 194-346 (368)
108 3lvq_E ARF-GAP with SH3 domain 99.7 3.8E-18 1.3E-22 186.4 13.6 124 36-178 134-265 (497)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.7 8.2E-18 2.8E-22 139.0 10.6 91 106-209 1-92 (93)
110 3lvq_E ARF-GAP with SH3 domain 99.7 9.5E-18 3.2E-22 183.3 13.9 138 70-229 132-277 (497)
111 2l6b_A NR1C; ankyrin, consensu 99.7 9.3E-18 3.2E-22 144.6 7.1 95 67-178 6-100 (115)
112 2l6b_A NR1C; ankyrin, consensu 99.7 3.6E-17 1.2E-21 140.9 9.1 106 104-223 6-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.6 3.9E-16 1.3E-20 133.3 8.3 92 64-172 18-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.6 1.8E-15 6.1E-20 129.1 9.1 92 99-204 17-109 (110)
115 4hkr_A Calcium release-activat 46.3 1.7E+02 0.0057 26.4 16.1 106 540-647 59-177 (214)
116 3tlw_A GLR4197 protein, GLIC; 39.7 1.9E+02 0.0064 28.2 11.1 46 507-559 232-277 (321)
117 1gp8_A Protein (scaffolding pr 35.3 29 0.001 21.9 2.5 19 36-54 15-33 (40)
118 4ev6_A Magnesium transport pro 28.2 62 0.0021 32.1 5.3 21 588-608 281-301 (339)
119 2iub_A CORA, divalent cation t 25.6 48 0.0016 33.3 3.9 21 588-608 305-325 (363)
120 3gvo_A Pumilio 2, pumilio homo 24.4 1.5E+02 0.0052 29.3 7.4 89 30-119 69-157 (351)
121 3gvo_A Pumilio 2, pumilio homo 24.3 86 0.0029 31.2 5.5 100 29-129 32-131 (351)
122 3mkq_B Coatomer subunit alpha; 22.5 2.7E+02 0.0091 24.6 7.6 132 35-208 9-141 (177)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-43 Score=383.26 Aligned_cols=376 Identities=14% Similarity=0.109 Sum_probs=277.2
Q ss_pred hhhhhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCC
Q 006173 29 IKDIDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGS 108 (658)
Q Consensus 29 ~~~~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~ 108 (658)
..+-.+.||||.||..|+.+.|+.|+ +. +...+.. +..|+|||| .||..|+.++|++|++.+ .+ ++.+ |..|.
T Consensus 9 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll-~~-g~~~~~~-~~~~~t~L~-~A~~~g~~~~v~~Ll~~g-~~-~~~~-~~~g~ 81 (437)
T 1n11_A 9 GGGESGLTPLHVASFMGHLPIVKNLL-QR-GASPNVS-NVKVETPLH-MAARAGHTEVAKYLLQNK-AK-VNAK-AKDDQ 81 (437)
T ss_dssp ------CCHHHHHHHHTCHHHHHHHH-HT-TCCSCCS-SSCCCCHHH-HHHHHTCHHHHHHHHHHT-CC-SSCC-CTTSC
T ss_pred ccCCCCCCHHHHHHHCCCHHHHHHHH-Hc-CCCCCCC-CCCCCCHHH-HHHHcCCHHHHHHHHhCC-CC-CCCC-CCCCC
Confidence 34456889999999999999999999 44 4444444 788999999 999999999999999994 33 7788 99999
Q ss_pred hHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchh
Q 006173 109 EYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFV 187 (658)
Q Consensus 109 TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t 187 (658)
||||+||..|+.++|++|++.++++ +..+. . |.||||+|+..|+.+++++|++++++ ...+..|.|
T Consensus 82 t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~-----------~-g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t 148 (437)
T 1n11_A 82 TPLHCAARIGHTNMVKLLLENNANP-NLATT-----------A-GHTPLHIAAREGHVETVLALLEKEASQACMTKKGFT 148 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCT-TCCCT-----------T-CCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCC
T ss_pred CHHHHHHHCCCHHHHHHHHhCCCCC-CCCCC-----------C-CCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCC
Confidence 9999999999999999999999875 44455 6 99999999999999999999999985 567889999
Q ss_pred HHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCCC
Q 006173 188 LLKFLIDSNLFDMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSENV 267 (658)
Q Consensus 188 ~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 267 (658)
|||+|+..|+.+++++|++++.+ .+..+.+|.||||+|+..+ +..+++.++.......... .
T Consensus 149 ~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~-------~~~~v~~Ll~~g~~~~~~~----------~ 210 (437)
T 1n11_A 149 PLHVAAKYGKVRVAELLLERDAH-PNAAGKNGLTPLHVAVHHN-------NLDIVKLLLPRGGSPHSPA----------W 210 (437)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC-TTCCCSSCCCHHHHHHHTT-------CHHHHHHHGGGTCCSCCCC----------T
T ss_pred HHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHcC-------CHHHHHHHHhCCCCCCCcC----------C
Confidence 99999999999999999998544 5778899999999999986 3466777765443221100 0
Q ss_pred CCchhh-hhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHH-HHhhhhhHHHHHHHHHHHHhhhhhh
Q 006173 268 GGDLEK-QLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSI-RDAKIIHEQTLEILRIMCAGAVDIL 345 (658)
Q Consensus 268 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~~~~~ 345 (658)
.+.-+- +........++.++++........+. .+...+ ......+ .++++.+++ ..
T Consensus 211 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~---------------~g~t~L~~A~~~g~---~~~v~~Ll~----~~ 268 (437)
T 1n11_A 211 NGYTPLHIAAKQNQVEVARSLLQYGGSANAESV---------------QGVTPLHLAAQEGH---AEMVALLLS----KQ 268 (437)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT---------------TCCCHHHHHHHTTC---HHHHHHHHT----TT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC---------------CCCCHHHHHHHCCC---HHHHHHHHh----cC
Confidence 011111 11111223455555554321111110 000011 1112222 233444433 33
Q ss_pred cchhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhcCCCccccccccccc
Q 006173 346 NTHEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPNIYPFFMANIDE 425 (658)
Q Consensus 346 ~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~in~~D~ 425 (658)
.+.+..+..|.||||+|+..|+.+++++|++++ .+ ++.+|..|+||||+|+.+|+.+++++|++.|+ ++|.+|.
T Consensus 269 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga----d~n~~~~ 342 (437)
T 1n11_A 269 ANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHG-VM-VDATTRMGYTPLHVASHYGNIKLVKFLLQHQA----DVNAKTK 342 (437)
T ss_dssp CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHT-CC-TTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTC----CTTCCCT
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC-cc-CCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCC----CCCCCCC
Confidence 445567888999999999999999999999998 55 56779999999999999999999999999988 7899999
Q ss_pred CCCchhhhHhhcCCCCCCChhHHhhHHHHHHHHHHHhhcCcchhhhccCCCCCchhhhHHH
Q 006173 426 KRINILHIAAMSVPSTEVPGAALQMQRELQWFKAVENCVHPTLQDQLNDKDKTPREVFTKE 486 (658)
Q Consensus 426 ~G~TpLHlAa~~g~~~~v~~~~l~~~~~l~~~~~v~~~~~~~~~~~~n~~G~Tp~dl~~~~ 486 (658)
.|+||||+|++.|+.+.+ .+. ++. ....+.+|.+|+||++++.+.
T Consensus 343 ~g~t~L~~A~~~g~~~iv-----------~~L--l~~---ga~~~~~~~~g~t~l~~A~~~ 387 (437)
T 1n11_A 343 LGYSPLHQAAQQGHTDIV-----------TLL--LKN---GASPNEVSSDGTTPLAIAKRL 387 (437)
T ss_dssp TSCCHHHHHHHTTCHHHH-----------HHH--HHT---TCCSCCCCSSSCCHHHHHHHT
T ss_pred CCCCHHHHHHHCChHHHH-----------HHH--HHC---cCCCCCCCCCCCCHHHHHHHc
Confidence 999999999999984221 111 111 123667899999999998654
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=9e-41 Score=361.04 Aligned_cols=347 Identities=14% Similarity=0.118 Sum_probs=258.5
Q ss_pred hhhhhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCC
Q 006173 29 IKDIDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGS 108 (658)
Q Consensus 29 ~~~~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~ 108 (658)
..+..+.+|||.|+..|+.+.++.|+ +. +..++.+ +.+|+|||| .|+..|+.++|++|++++ .+ ++.. |..|.
T Consensus 42 ~~~~~~~t~L~~A~~~g~~~~v~~Ll-~~-g~~~~~~-~~~g~t~L~-~A~~~g~~~~v~~Ll~~g-a~-~~~~-~~~g~ 114 (437)
T 1n11_A 42 VSNVKVETPLHMAARAGHTEVAKYLL-QN-KAKVNAK-AKDDQTPLH-CAARIGHTNMVKLLLENN-AN-PNLA-TTAGH 114 (437)
T ss_dssp CSSSCCCCHHHHHHHHTCHHHHHHHH-HH-TCCSSCC-CTTSCCHHH-HHHHHTCHHHHHHHHHHT-CC-TTCC-CTTCC
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHH-hC-CCCCCCC-CCCCCCHHH-HHHHCCCHHHHHHHHhCC-CC-CCCC-CCCCC
Confidence 34556789999999999999999999 44 3445544 789999999 999999999999999994 33 6777 99999
Q ss_pred hHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchh
Q 006173 109 EYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFV 187 (658)
Q Consensus 109 TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t 187 (658)
||||+|+..|+.+++++|++.+++.. ..+. . |.||||+|+..|+.+++++|++++++ +..+..|.|
T Consensus 115 t~L~~A~~~g~~~~v~~Ll~~~~~~~-~~~~-----------~-g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t 181 (437)
T 1n11_A 115 TPLHIAAREGHVETVLALLEKEASQA-CMTK-----------K-GFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLT 181 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSC-CCCT-----------T-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCC
T ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCc-CCCC-----------C-CCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCC
Confidence 99999999999999999999988753 3344 5 99999999999999999999999885 567888999
Q ss_pred HHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCCC
Q 006173 188 LLKFLIDSNLFDMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSENV 267 (658)
Q Consensus 188 ~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 267 (658)
|||+|+..|+.+++++|++++.+ ....+.+|.||||+|+..+ +..+++.++.....++..+.....
T Consensus 182 ~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~-------~~~~~~~Ll~~g~~~~~~~~~g~t------ 247 (437)
T 1n11_A 182 PLHVAVHHNNLDIVKLLLPRGGS-PHSPAWNGYTPLHIAAKQN-------QVEVARSLLQYGGSANAESVQGVT------ 247 (437)
T ss_dssp HHHHHHHTTCHHHHHHHGGGTCC-SCCCCTTCCCHHHHHHHTT-------CHHHHHHHHHTTCCTTCCCTTCCC------
T ss_pred HHHHHHHcCCHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcC-------CHHHHHHHHHcCCCCCCCCCCCCC------
Confidence 99999999999999999988554 4667778999999999885 346677776655433322111100
Q ss_pred CCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHH-HHhhhhhHHHHHHHHHHHHhhhhhhc
Q 006173 268 GGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSI-RDAKIIHEQTLEILRIMCAGAVDILN 346 (658)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~~~~~~ 346 (658)
.+. +........++.+++.........+. .+...+ ......+ .++++.+.+.. .
T Consensus 248 --~L~-~A~~~g~~~~v~~Ll~~~~~~~~~~~---------------~g~t~L~~A~~~~~---~~~~~~Ll~~g----~ 302 (437)
T 1n11_A 248 --PLH-LAAQEGHAEMVALLLSKQANGNLGNK---------------SGLTPLHLVAQEGH---VPVADVLIKHG----V 302 (437)
T ss_dssp --HHH-HHHHTTCHHHHHHHHTTTCCTTCCCT---------------TCCCHHHHHHHHTC---HHHHHHHHHHT----C
T ss_pred --HHH-HHHHCCCHHHHHHHHhcCCCCCCCCC---------------CCCCHHHHHHHcCC---HHHHHHHHhCC----c
Confidence 000 00111223444555443321111100 000011 1111222 23444444433 3
Q ss_pred chhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhcCCCcccccccccccC
Q 006173 347 THEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPNIYPFFMANIDEK 426 (658)
Q Consensus 347 ~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~in~~D~~ 426 (658)
+.+.++..|+||||+|+..|+.++|++|++++ .+ ++.+|..|+||||+|+.+|+.+++++|++.|+ +++.+|.+
T Consensus 303 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-ad-~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga----~~~~~~~~ 376 (437)
T 1n11_A 303 MVDATTRMGYTPLHVASHYGNIKLVKFLLQHQ-AD-VNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGA----SPNEVSSD 376 (437)
T ss_dssp CTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTT-CC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----CSCCCCSS
T ss_pred cCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcC-CC-CCCCCCCCCCHHHHHHHCChHHHHHHHHHCcC----CCCCCCCC
Confidence 44557788999999999999999999999999 65 56789999999999999999999999999998 77999999
Q ss_pred CCchhhhHhhcCCC
Q 006173 427 RINILHIAAMSVPS 440 (658)
Q Consensus 427 G~TpLHlAa~~g~~ 440 (658)
|+||||+|++.|+.
T Consensus 377 g~t~l~~A~~~g~~ 390 (437)
T 1n11_A 377 GTTPLAIAKRLGYI 390 (437)
T ss_dssp SCCHHHHHHHTTCH
T ss_pred CCCHHHHHHHcCcH
Confidence 99999999999983
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=5.3e-39 Score=334.75 Aligned_cols=283 Identities=12% Similarity=0.059 Sum_probs=236.7
Q ss_pred hhhhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCCh
Q 006173 30 KDIDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSE 109 (658)
Q Consensus 30 ~~~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~T 109 (658)
...++.++||.||+.||.+.|+.|| +. +.+++.+.+..|+|||| +||..|+.++|++||+++ .+ ++.+ |..+.+
T Consensus 21 ~~~~~~t~L~~Av~~g~~~~V~~LL-~~-Gadvn~~~~~~g~TpLh-~A~~~g~~~iv~~Ll~~g-a~-~~~~-~~~~~~ 94 (337)
T 4g8k_A 21 AAVEDNHLLIKAVQNEDVDLVQQLL-EG-GANVNFQEEEGGWTPLH-NAVQMSREDIVELLLRHG-AD-PVLR-KKNGAT 94 (337)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHH-HH-TCCTTCCCTTTCCCHHH-HHHHTTCHHHHHHHHHTT-CC-TTCC-CTTCCC
T ss_pred CCCCCChHHHHHHHcCCHHHHHHHH-HC-CCCCCccCCCCCcCHHH-HHHHcCCHHHHHHHHHcC-Cc-hhhh-ccCCCc
Confidence 3456889999999999999999999 54 45566664567999999 999999999999999995 33 6778 999999
Q ss_pred HHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCCC----------
Q 006173 110 YMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTREP---------- 179 (658)
Q Consensus 110 pLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~~---------- 179 (658)
|+|.++..++.+++..+++.++++ +..+. . |.||||+|+..|+.+++++|++++++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~-----------~-g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~ 161 (337)
T 4g8k_A 95 PFILAAIAGSVKLLKLFLSKGADV-NECDF-----------Y-GFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQ 161 (337)
T ss_dssp HHHHHHHHTCHHHHHHHHTTTCCT-TCBCT-----------T-CCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC---
T ss_pred hhHHHHhcccchhhHHhhhccchh-hhhcc-----------C-CCCHHHHHHHcCcHHHHHHHHHcCCCcchhhcccccc
Confidence 999999999999999999998886 44455 6 999999999999999999999998731
Q ss_pred -CCCCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCC
Q 006173 180 -LDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNP 258 (658)
Q Consensus 180 -~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~ 258 (658)
..+..|.||||+|+..|+.+++++||++.+..++.+|..|.||||.++..+..
T Consensus 162 ~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~-------------------------- 215 (337)
T 4g8k_A 162 ERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDD-------------------------- 215 (337)
T ss_dssp --CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCT--------------------------
T ss_pred ccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCc--------------------------
Confidence 35667999999999999999999999887777889999999999987765311
Q ss_pred CCCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHH
Q 006173 259 HPHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMC 338 (658)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 338 (658)
.+ ...+++.++
T Consensus 216 ----------~~-----------------------------------------------------------~~~i~~lLl 226 (337)
T 4g8k_A 216 ----------SD-----------------------------------------------------------VEAITHLLL 226 (337)
T ss_dssp ----------TT-----------------------------------------------------------HHHHHHHHH
T ss_pred ----------cc-----------------------------------------------------------HHHHHHHHH
Confidence 00 001222222
Q ss_pred HhhhhhhcchhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhcCCCcccc
Q 006173 339 AGAVDILNTHEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPNIYPF 418 (658)
Q Consensus 339 ~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~ 418 (658)
....+.+.+|..|+||||+|+..|+.++++.|++.. ...++.+|.+|+||||+|+++|+.++|++|++.|+
T Consensus 227 ----~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~-~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA---- 297 (337)
T 4g8k_A 227 ----DHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE-HIEINDTDSDGKTALLLAVELKLKKIAELLCKRGA---- 297 (337)
T ss_dssp ----HTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTST-TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSC----
T ss_pred ----HCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhc-CCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCC----
Confidence 233445567888999999999999999999999986 66788899999999999999999999999999998
Q ss_pred cccccccCCCchhhhHhhcCCC
Q 006173 419 FMANIDEKRINILHIAAMSVPS 440 (658)
Q Consensus 419 ~in~~D~~G~TpLHlAa~~g~~ 440 (658)
++| +.||||+|++.|+.
T Consensus 298 d~n-----~~~~L~~A~~~~~~ 314 (337)
T 4g8k_A 298 STD-----CGDLVMTARRNYDH 314 (337)
T ss_dssp SST-----TCCHHHHHHHTTCH
T ss_pred CCC-----CCCHHHHHHHcCCH
Confidence 444 45699999999984
No 4
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=9.3e-39 Score=323.74 Aligned_cols=270 Identities=13% Similarity=0.061 Sum_probs=227.8
Q ss_pred hhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHH
Q 006173 32 IDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYM 111 (658)
Q Consensus 32 ~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpL 111 (658)
.++.++||.|+..|+.+.++.++ +.. ..++...+..|+|||| .|+..|+.++|++|++.+ .+ ++.. |..|.|||
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll-~~g-~~~~~~~~~~g~t~L~-~A~~~g~~~~v~~Ll~~g-~~-~~~~-~~~g~t~L 76 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLL-EGG-ANVNFQEEEGGWTPLH-NAVQMSREDIVELLLRHG-AD-PVLR-KKNGATPF 76 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHH-HTT-CCTTCCCTTTCCCHHH-HHHHTTCHHHHHHHHHTT-CC-TTCC-CTTCCCHH
T ss_pred cccchHHHHHHHcCCHHHHHHHH-HcC-CCcccccCCCCCcHHH-HHHHcCCHHHHHHHHHcC-CC-Cccc-CCCCCCHH
Confidence 56889999999999999999999 544 4455555778999999 999999999999999994 33 6777 99999999
Q ss_pred HHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCCC-CC---------
Q 006173 112 EYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTREP-LD--------- 181 (658)
Q Consensus 112 h~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~~-~~--------- 181 (658)
|+|+..|+.+++++|+++++++ +..+. . |.||||+|+..|+.+++++|++++++. ..
T Consensus 77 ~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-----------~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~ 143 (285)
T 1wdy_A 77 LLAAIAGSVKLLKLFLSKGADV-NECDF-----------Y-GFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQER 143 (285)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCT-TCBCT-----------T-CCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCC-CccCc-----------c-cCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHh
Confidence 9999999999999999998886 44444 6 999999999999999999999999852 22
Q ss_pred -CCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCC
Q 006173 182 -GRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHP 260 (658)
Q Consensus 182 -~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~ 260 (658)
+..|.||||+|+..|+.++++.|++..+...+.+|..|.||||+|+..+....
T Consensus 144 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~-------------------------- 197 (285)
T 1wdy_A 144 LRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSD-------------------------- 197 (285)
T ss_dssp TTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTT--------------------------
T ss_pred hccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccch--------------------------
Confidence 78899999999999999999999998777778899999999999998853200
Q ss_pred CCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHh
Q 006173 261 HPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAG 340 (658)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 340 (658)
..++++.+.+.
T Consensus 198 ---------------------------------------------------------------------~~~i~~~Ll~~ 208 (285)
T 1wdy_A 198 ---------------------------------------------------------------------VEAITHLLLDH 208 (285)
T ss_dssp ---------------------------------------------------------------------HHHHHHHHHHT
T ss_pred ---------------------------------------------------------------------HHHHHHHHHHc
Confidence 01222333332
Q ss_pred hhhhhcchhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhcCCCcccccc
Q 006173 341 AVDILNTHEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPNIYPFFM 420 (658)
Q Consensus 341 ~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~i 420 (658)
..+.+.+|..|.||||+|+..|+.+++++|++.. +..++.+|..|+||||+|+..|+.+++++|++.|+ ++
T Consensus 209 ----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga----~~ 279 (285)
T 1wdy_A 209 ----GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE-HIEINDTDSDGKTALLLAVELKLKKIAELLCKRGA----ST 279 (285)
T ss_dssp ----TCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSS-SCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSS----CS
T ss_pred ----CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcc-CCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCC----CC
Confidence 2344457788999999999999999999999955 55678889999999999999999999999999998 56
Q ss_pred cccc
Q 006173 421 ANID 424 (658)
Q Consensus 421 n~~D 424 (658)
+.+|
T Consensus 280 ~~~d 283 (285)
T 1wdy_A 280 DCGD 283 (285)
T ss_dssp CCSS
T ss_pred Cccc
Confidence 6666
No 5
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2e-38 Score=331.55 Aligned_cols=284 Identities=11% Similarity=0.053 Sum_probs=232.2
Q ss_pred hhhhhhhhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCC
Q 006173 26 EKIIKDIDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARD 105 (658)
Q Consensus 26 ~~~~~~~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~ 105 (658)
.....+..+.++||.||+.|+.+.++.++ ...+..++.+ +..|+|||| .|+..|+.++|++|++.+ .+ ++.. |.
T Consensus 16 ~~~~~~~~~~~~L~~A~~~g~~~~v~~ll-~~~~~~~~~~-d~~g~t~L~-~A~~~g~~~~v~~Ll~~g-~~-~~~~-~~ 89 (351)
T 3utm_A 16 KAVLTGEYKKDELLEAARSGNEEKLMALL-TPLNVNCHAS-DGRKSTPLH-LAAGYNRVRIVQLLLQHG-AD-VHAK-DK 89 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHC-CTTTTTCCCS-STTCCCHHH-HHHHTTCHHHHHHHHHTT-CC-TTCC-CT
T ss_pred eeeeeccccchhHHHHHHcCCHHHHHHHH-HhcCCCcccC-CCCCCCHHH-HHHHcCCHHHHHHHHHcC-CC-CCcc-CC
Confidence 33445566889999999999999999999 6555555544 889999999 999999999999999994 34 7888 99
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCc
Q 006173 106 EGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQ 184 (658)
Q Consensus 106 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~ 184 (658)
.|.||||+|+..|+.+++++|++.++++ +..+. . |.||||+|+..|+.+++++|++++++ ...+..
T Consensus 90 ~g~t~L~~A~~~g~~~iv~~Ll~~g~~~-~~~~~-----------~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 156 (351)
T 3utm_A 90 GGLVPLHNACSYGHYEVTELLLKHGACV-NAMDL-----------W-QFTPLHEAASKNRVEVCSLLLSHGADPTLVNCH 156 (351)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-----------T-CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCC-----------C-CCCHHHHHHHcCCHHHHHHHHHcCCCCccccCC
Confidence 9999999999999999999999999886 44455 6 99999999999999999999999985 577888
Q ss_pred chhHHHHHHh---------------------cCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhh
Q 006173 185 GFVLLKFLID---------------------SNLFDMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWK 243 (658)
Q Consensus 185 g~t~Lh~A~~---------------------~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~ 243 (658)
|.+++|.|+. .+..+.+..++.... .....+..|.||||+|+..+..
T Consensus 157 g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~t~L~~A~~~~~~----------- 224 (351)
T 3utm_A 157 GKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEI-INFKQPQSHETALHCAVASLHP----------- 224 (351)
T ss_dssp SCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCC-TTCCCTTTCCCHHHHHHHCCST-----------
T ss_pred CCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhc-ccccCCCCCCCHHHHHHHHhCc-----------
Confidence 9998887654 444555555555432 3344677899999999988421
Q ss_pred hhhcccccccccCCCCCCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHh
Q 006173 244 RLLYQWIPIQEEYNPHPHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDA 323 (658)
Q Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 323 (658)
T Consensus 225 -------------------------------------------------------------------------------- 224 (351)
T 3utm_A 225 -------------------------------------------------------------------------------- 224 (351)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhHHHHHHHHHHHHhhhhhhcchhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCH
Q 006173 324 KIIHEQTLEILRIMCAGAVDILNTHEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRRE 403 (658)
Q Consensus 324 ~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~ 403 (658)
...++++.+.+. ..+.+.+|..|+||||+|+..|+.+++++|++++ .+ ++.+|..|+||||+|+.+|+.
T Consensus 225 -----~~~~~~~~Ll~~----g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~-~n~~d~~g~t~L~~A~~~~~~ 293 (351)
T 3utm_A 225 -----KRKQVAELLLRK----GANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHG-AK-MNALDSLGQTALHRAALAGHL 293 (351)
T ss_dssp -----THHHHHHHHHHT----TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CC-TTCCCTTSCCHHHHHHHHTCH
T ss_pred -----cHHHHHHHHHHc----CCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC-CC-CCCcCCCCCCHHHHHHHcCcH
Confidence 011223333332 2334456788999999999999999999999998 65 567899999999999999999
Q ss_pred hHHHHHhcCCCcccccccccccCCCchhhhHh
Q 006173 404 KVFNIIFNFPNIYPFFMANIDEKRINILHIAA 435 (658)
Q Consensus 404 ~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa 435 (658)
+++++|++.|+ +++.+|.+|+||||+|.
T Consensus 294 ~~v~~Ll~~ga----d~~~~~~~g~tal~~a~ 321 (351)
T 3utm_A 294 QTCRLLLSYGS----DPSIISLQGFTAAQMGN 321 (351)
T ss_dssp HHHHHHHHTTC----CTTCCCTTSCCHHHHSC
T ss_pred HHHHHHHHcCC----CCCCcCCCCCChhhhhh
Confidence 99999999998 77999999999999995
No 6
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=316.32 Aligned_cols=243 Identities=11% Similarity=0.026 Sum_probs=187.4
Q ss_pred hhhhHHHHHHHHhCCHHHHHHHHhhcCcc----------cccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCcccccc
Q 006173 32 IDSYKQVTRYILENDWKGLEDYIMSKTPN----------ALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQN 101 (658)
Q Consensus 32 ~~~~~~L~~A~~~G~~~~v~~ll~~~~~~----------~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~ 101 (658)
.++.++||.|+..|+.+.+..++ ...+. .++ ..+.+|+|||| .||..|+.++|+.|++.+ .+ ++.
T Consensus 13 ~~~~~~lH~Aa~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~~-~~~~~g~t~L~-~Aa~~g~~~~v~~Ll~~g-~~-~~~ 87 (285)
T 3d9h_A 13 GLVPRGSHMASMDGKQGGMDGSK-PAGPRDFPGIRLLSNPLM-GDAVSDWSPMH-EAAIHGHQLSLRNLISQG-WA-VNI 87 (285)
T ss_dssp ------------------------------CCSEECCCCTTC-SSSCCSCCHHH-HHHHTTCHHHHHHHHHTT-CC-SCE
T ss_pred hHHHHHHHHHhhcCCCCCcccCC-CCccccccchhhhhCccc-CCCccCCCHHH-HHHHcCCHHHHHHHHHCC-CC-CCC
Confidence 45789999999999998888866 33222 122 23788999999 999999999999999984 33 788
Q ss_pred ccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCCCCC
Q 006173 102 FARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTREPLD 181 (658)
Q Consensus 102 ~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~ 181 (658)
+ |..|.||||+||..|+.+++++|++.++++ +..+. . |.||||+|+..|+.+++++|++++++...
T Consensus 88 ~-~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~-----------~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 153 (285)
T 3d9h_A 88 I-TADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTA-----------D-WHTPLFNACVSGSWDCVNLLLQHGASVQP 153 (285)
T ss_dssp E-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCT-----------T-CCCHHHHHHHHTCHHHHHHHHHTTCCSSC
T ss_pred c-CCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCC-----------C-CCCHHHHHHHcCHHHHHHHHHHCCCCCCC
Confidence 8 999999999999999999999999998875 44455 6 99999999999999999999999997666
Q ss_pred CCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCC
Q 006173 182 GRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPH 261 (658)
Q Consensus 182 ~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~ 261 (658)
+..|.||||+|+..|+.++++.|++.+.+. +
T Consensus 154 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~------------------------------------------------ 184 (285)
T 3d9h_A 154 ESDLASPIHEAARRGHVECVNSLIAYGGNI-D------------------------------------------------ 184 (285)
T ss_dssp SCTTSCHHHHHHHHTCHHHHHHHHHTTCCT-T------------------------------------------------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-C------------------------------------------------
Confidence 777999999999999999999999874322 1
Q ss_pred CCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhh
Q 006173 262 PPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGA 341 (658)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 341 (658)
T Consensus 185 -------------------------------------------------------------------------------- 184 (285)
T 3d9h_A 185 -------------------------------------------------------------------------------- 184 (285)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhcchhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhcCCCccccccc
Q 006173 342 VDILNTHEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPNIYPFFMA 421 (658)
Q Consensus 342 ~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~in 421 (658)
.+|..|.||||+|+..|+.+++++|++.+ .+.. .|..|+||||+|+..++.+++++|++.|+ +++
T Consensus 185 --------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga----d~~ 249 (285)
T 3d9h_A 185 --------HKISHLGTPLYLACENQQRACVKKLLESG-ADVN--QGKGQDSPLHAVVRTASEELACLLMDFGA----DTQ 249 (285)
T ss_dssp --------CCBTTTBCHHHHHHHTTCHHHHHHHHHTT-CCTT--CCBTTBCHHHHHHHTTCHHHHHHHHHTTC----CTT
T ss_pred --------CcCCCCCCHHHHHHHcCcHHHHHHHHHCC-CCCC--CCCCCCCHHHHHHHcCCHHHHHHHHHCCC----CCC
Confidence 13445789999999999999999999998 7644 48899999999999999999999999988 789
Q ss_pred ccccCCCchhhhHhhc
Q 006173 422 NIDEKRINILHIAAMS 437 (658)
Q Consensus 422 ~~D~~G~TpLHlAa~~ 437 (658)
.+|.+|+||||+|+..
T Consensus 250 ~~d~~g~t~l~~A~~~ 265 (285)
T 3d9h_A 250 AKNAEGKRPVELVPPE 265 (285)
T ss_dssp CCCTTSCCGGGGSCTT
T ss_pred CcCCCCCCHHHHhcCc
Confidence 9999999999999943
No 7
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.7e-37 Score=324.50 Aligned_cols=307 Identities=13% Similarity=0.078 Sum_probs=235.0
Q ss_pred cCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCC
Q 006173 67 VDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNI 146 (658)
Q Consensus 67 ~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~ 146 (658)
+..|.|+|| .||..|+.+.|+.|+...+ ..++.. |..|.||||+||..|+.++|++|++.++++ +..+.
T Consensus 21 ~~~~~~~L~-~A~~~g~~~~v~~ll~~~~-~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~------- 89 (351)
T 3utm_A 21 GEYKKDELL-EAARSGNEEKLMALLTPLN-VNCHAS-DGRKSTPLHLAAGYNRVRIVQLLLQHGADV-HAKDK------- 89 (351)
T ss_dssp HHHHHHHHH-HHHHHTCHHHHHHHCCTTT-TTCCCS-STTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-------
T ss_pred ccccchhHH-HHHHcCCHHHHHHHHHhcC-CCcccC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCC-------
Confidence 567899999 9999999999999998733 447888 999999999999999999999999999885 44555
Q ss_pred cccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHH
Q 006173 147 KDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILES 225 (658)
Q Consensus 147 ~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~ 225 (658)
. |.||||+|+..|+.+++++|++++++ +..|..|.||||+|+..|+.+++++|++++.+ .+..+..|.||+++
T Consensus 90 ----~-g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~~~l~~ 163 (351)
T 3utm_A 90 ----G-GLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGAD-PTLVNCHGKSAVDM 163 (351)
T ss_dssp ----T-CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred ----C-CCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CccccCCCCcchHH
Confidence 6 99999999999999999999999985 67889999999999999999999999998544 57788999999998
Q ss_pred HhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHH
Q 006173 226 LSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFV 305 (658)
Q Consensus 226 Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (658)
|+..+.. +.+ .+.+
T Consensus 164 a~~~~~~----------~~~---------------------------------------~~~~----------------- 177 (351)
T 3utm_A 164 APTPELR----------ERL---------------------------------------TYEF----------------- 177 (351)
T ss_dssp CSSHHHH----------HHH---------------------------------------HHHH-----------------
T ss_pred HhhhhhH----------HHH---------------------------------------Hhhh-----------------
Confidence 8765210 000 0000
Q ss_pred HHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhhcchhhhhcCCCcHHHHHHHh---CcHHHHHHHHhhcCCCc
Q 006173 306 LWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDILNTHEEAQNVFKKPMFKAARL---GIYEIVMGIMNSYFPWS 382 (658)
Q Consensus 306 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~g~tpLh~Aa~~---G~~~~v~~Ll~~~~~~~ 382 (658)
.. ........... ...+..+. .........+..|.||||+|+.. ++.+++++|++.+ .+
T Consensus 178 ------~~---~~~~~~~~~~~---~~~~~~~l----~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g-~~- 239 (351)
T 3utm_A 178 ------KG---HSLLQAAREAD---LAKVKKTL----ALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKG-AN- 239 (351)
T ss_dssp ------HH---HHHHHHHHTTC---HHHHHHHT----TTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTT-CC-
T ss_pred ------cc---cHHHHHHHhcc---HHHHHHHH----HhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcC-CC-
Confidence 00 00000000000 01111111 11111122567799999999999 6689999999998 65
Q ss_pred ccccccCCChHHHHHHHhCCHhHHHHHhcCCCcccccccccccCCCchhhhHhhcCCCCCCChhHHhhHHHHHHHHHHHh
Q 006173 383 LEFKNKDGYDIFKVAVEHRREKVFNIIFNFPNIYPFFMANIDEKRINILHIAAMSVPSTEVPGAALQMQRELQWFKAVEN 462 (658)
Q Consensus 383 ~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~v~~~~l~~~~~l~~~~~v~~ 462 (658)
++.+|..|+||||+|+..|+.+++++|++.|+ ++|.+|..|+||||+|++.|+.+.+ .+. ++.
T Consensus 240 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga----~~n~~d~~g~t~L~~A~~~~~~~~v-----------~~L--l~~ 302 (351)
T 3utm_A 240 VNEKNKDFMTPLHVAAERAHNDVMEVLHKHGA----KMNALDSLGQTALHRAALAGHLQTC-----------RLL--LSY 302 (351)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHHHTCHHHH-----------HHH--HHT
T ss_pred cCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCC----CCCCcCCCCCCHHHHHHHcCcHHHH-----------HHH--HHc
Confidence 56779999999999999999999999999998 7899999999999999999984211 111 111
Q ss_pred hcCcchhhhccCCCCCchhhhHHHHHHHHHhh
Q 006173 463 CVHPTLQDQLNDKDKTPREVFTKEHEKLVEEG 494 (658)
Q Consensus 463 ~~~~~~~~~~n~~G~Tp~dl~~~~~~~l~~~~ 494 (658)
....+.+|++|+||++++.+...++..+.
T Consensus 303 ---gad~~~~~~~g~tal~~a~~~~~~~l~~~ 331 (351)
T 3utm_A 303 ---GSDPSIISLQGFTAAQMGNEAVQQILSES 331 (351)
T ss_dssp ---TCCTTCCCTTSCCHHHHSCHHHHHHHHHC
T ss_pred ---CCCCCCcCCCCCChhhhhhHHHHHHHHhc
Confidence 12367899999999999987776666553
No 8
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=4.2e-38 Score=332.49 Aligned_cols=285 Identities=10% Similarity=0.074 Sum_probs=205.4
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhhcCcc----------------------cccccccCCCCcHHHHhhhcCCChHHHHHH
Q 006173 33 DSYKQVTRYILENDWKGLEDYIMSKTPN----------------------ALTCIIVDQSSIFEFIVGIPDVPATLVDKL 90 (658)
Q Consensus 33 ~~~~~L~~A~~~G~~~~v~~ll~~~~~~----------------------~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~L 90 (658)
....+|+.|+..|+.+.++.++ +.... .+....+..|.|||| .|+..|+ ++++.|
T Consensus 36 ~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~t~L~-~Aa~~~~-~~~~~L 112 (373)
T 2fo1_E 36 SSQHSLLEASYDGYIKRQRNEL-QHYSLYPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLH-TEAAGSY-AITEPI 112 (373)
T ss_dssp -----------------------------------------------------------CCCHHH-HHHHSSS-CCCSCC
T ss_pred ccccccccccCCccccchhhhh-hhhccccCccccCCCCCccccccccccccccCCCCCCccHHH-HHhcCCc-hHHHHh
Confidence 4556677777777777666554 21110 011234678999999 9999654 788887
Q ss_pred HhcCCccccccccC-CCCChHHHHHHhcCCHHHHHHHH--------hcCCCCCcccccCCCCCCCcccCCCCCcHHHHHH
Q 006173 91 LSKVPRNCLQNFAR-DEGSEYMEYAVSTGKLNLITTLM--------GYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAA 161 (658)
Q Consensus 91 l~~~~~~~l~~~~d-~~G~TpLh~Aa~~G~~~iv~~Ll--------~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa 161 (658)
+.. .++.. | ..|+||||+||..|+.+++++|+ +.++++ +..+. . |.||||+|+
T Consensus 113 ~~~----~~n~~-d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~v-n~~d~-----------~-g~TpL~~A~ 174 (373)
T 2fo1_E 113 TRE----SVNII-DPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADV-NAMDC-----------D-ENTPLMLAV 174 (373)
T ss_dssp STT----TTTTC-CCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCT-TCCCT-----------T-SCCHHHHHH
T ss_pred ccc----ccccc-CCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCC-cCCCC-----------C-CCCHHHHHH
Confidence 653 36677 7 79999999999999999888877 566664 34444 6 999999999
Q ss_pred HhCcHHHHHHhccCCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHhCC--CccccccCCCCcHhHHHhcCCCCCCCCCC
Q 006173 162 KAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKCHP--MIARADIGETGKILESLSKRPKAFASGSR 238 (658)
Q Consensus 162 ~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~--~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~ 238 (658)
..|+.++|++|++++++ ...+..|.||||+|+..|+.+++++|++... ...+..|.+|.||||+|+..+.. ..
T Consensus 175 ~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~----~~ 250 (373)
T 2fo1_E 175 LARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGR----DQ 250 (373)
T ss_dssp HHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCST----TH
T ss_pred HcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCc----ch
Confidence 99999999999999985 6789999999999999999999999998752 45577899999999999988521 01
Q ss_pred cchhhhhhcccccccccCCCCCCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhH
Q 006173 239 LGSWKRLLYQWIPIQEEYNPHPHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIK 318 (658)
Q Consensus 239 l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 318 (658)
.
T Consensus 251 ~------------------------------------------------------------------------------- 251 (373)
T 2fo1_E 251 V------------------------------------------------------------------------------- 251 (373)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred H-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHhhhhhHHHHHHHHHHHHhhhhhhc-----chhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChH
Q 006173 319 SIRDAKIIHEQTLEILRIMCAGAVDILN-----THEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDI 393 (658)
Q Consensus 319 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~-----~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~ 393 (658)
++++.+++.. ...+ ....+|..|.||||+|+..|+.+++++|++++ +..++.+|.+|+||
T Consensus 252 -------------~~v~~Ll~~g-~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~-~~~~n~~d~~g~Tp 316 (373)
T 2fo1_E 252 -------------ASAKLLVEKG-AKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEK-GSNKDKQDEDGKTP 316 (373)
T ss_dssp -------------HHHHHHHHHT-CCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHS-CCCTTCCCTTCCCH
T ss_pred -------------HHHHHHHHCC-CCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhc-CCCccCcCCCCCCH
Confidence 1222222222 1111 11225678999999999999999999999998 77888899999999
Q ss_pred HHHHHHhCCHhHHHHHhcCCCcccccccccccCCCchhhhHhhcCCC
Q 006173 394 FKVAVEHRREKVFNIIFNFPNIYPFFMANIDEKRINILHIAAMSVPS 440 (658)
Q Consensus 394 Lh~A~~~~~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~ 440 (658)
||+|+.+|+.+++++|++.|+ +++.+|.+|+||||+|++.|+.
T Consensus 317 L~~A~~~g~~~iv~~Ll~~ga----d~~~~d~~g~t~l~~A~~~g~~ 359 (373)
T 2fo1_E 317 IMLAAQEGRIEVVMYLIQQGA----SVEAVDATDHTARQLAQANNHH 359 (373)
T ss_dssp HHHHHHHTCHHHHHHHHHTTC----CSSCCCSSSCCHHHHHHHTTCH
T ss_pred HHHHHHcCCHHHHHHHHHcCC----CccCCCCCCCCHHHHHHHcCCH
Confidence 999999999999999999998 7899999999999999999984
No 9
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=6.5e-37 Score=306.84 Aligned_cols=85 Identities=13% Similarity=0.009 Sum_probs=71.8
Q ss_pred hcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhcCCCccc----ccccccccCC
Q 006173 352 QNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPNIYP----FFMANIDEKR 427 (658)
Q Consensus 352 ~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~----~~in~~D~~G 427 (658)
+..|.||||+|+..|+.++++.|++++ .+ ++.+|.+|+||||+|+.++ +++++|++.+.... ..++.+|..|
T Consensus 163 ~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-ad-~~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~~l~~~~~~~~r~~~g 238 (261)
T 2xai_A 163 GKGQDSPLHAVARTASEELACLLMDFG-AD-TQAKNAEGKRPVELVPPES--PLAQLFLEREGPPSLMQLCRLRIRKCFG 238 (261)
T ss_dssp CBTTBCHHHHHHHHTCHHHHHHHHHTT-CC-TTCCCTTSCCGGGGSCTTC--THHHHHHHC-CCCCHHHHHHHHHHTTSC
T ss_pred CCCCCChHHHHHHcCCHHHHHHHHHcC-CC-CCCcCCCCCChhhhccccc--cHHHHHHhccCCccHHHHHHHHHHHHhc
Confidence 456889999999999999999999999 66 5778999999999999655 58999999866332 2567899999
Q ss_pred CchhhhHhhcCCC
Q 006173 428 INILHIAAMSVPS 440 (658)
Q Consensus 428 ~TpLHlAa~~g~~ 440 (658)
+||||+|++...+
T Consensus 239 ~t~l~~~~~~~~p 251 (261)
T 2xai_A 239 IQQHHKITKLVLP 251 (261)
T ss_dssp TTCGGGGGGSSSC
T ss_pred hhccccCcccCCc
Confidence 9999999988765
No 10
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=6.9e-36 Score=302.61 Aligned_cols=248 Identities=14% Similarity=0.111 Sum_probs=208.6
Q ss_pred CCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcc
Q 006173 69 QSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKD 148 (658)
Q Consensus 69 ~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~ 148 (658)
+|+|||| .|+..|+.++|++|++.+ .+ ++...+..|.||||+|+..|+.+++++|++.++++ ...+.
T Consensus 4 ~g~~~L~-~A~~~g~~~~v~~Ll~~g-~~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~--------- 70 (285)
T 1wdy_A 4 EDNHLLI-KAVQNEDVDLVQQLLEGG-AN-VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKK--------- 70 (285)
T ss_dssp HHHHHHH-HHHHTTCHHHHHHHHHTT-CC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT---------
T ss_pred ccchHHH-HHHHcCCHHHHHHHHHcC-CC-cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCC---------
Confidence 5789999 999999999999999995 34 33332778999999999999999999999998875 44444
Q ss_pred cCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHhCCCcccc---------ccCC
Q 006173 149 EEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARA---------DIGE 218 (658)
Q Consensus 149 ~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~---------~d~~ 218 (658)
. |.||||+|+..|+.+++++|++++++ ...+..|.||||+|+..|+.+++++|++++.+.... .+..
T Consensus 71 --~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~ 147 (285)
T 1wdy_A 71 --N-GATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKG 147 (285)
T ss_dssp --T-CCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCC
T ss_pred --C-CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccC
Confidence 6 99999999999999999999999985 678999999999999999999999999986654322 1778
Q ss_pred CCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchh
Q 006173 219 TGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSL 298 (658)
Q Consensus 219 g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (658)
|.||||+|+..++.
T Consensus 148 g~t~L~~A~~~~~~------------------------------------------------------------------ 161 (285)
T 1wdy_A 148 GATALMDAAEKGHV------------------------------------------------------------------ 161 (285)
T ss_dssp CCCHHHHHHHHTCH------------------------------------------------------------------
T ss_pred CCcHHHHHHHcCCH------------------------------------------------------------------
Confidence 99999999988522
Q ss_pred HHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhhcchhhhhcCCCcHHHHHHHhCc----HHHHHHH
Q 006173 299 RQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDILNTHEEAQNVFKKPMFKAARLGI----YEIVMGI 374 (658)
Q Consensus 299 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~----~~~v~~L 374 (658)
++++.+++. ...+.+.+|..|.||||+|+..|+ .+++++|
T Consensus 162 ---------------------------------~~v~~Ll~~---~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~L 205 (285)
T 1wdy_A 162 ---------------------------------EVLKILLDE---MGADVNACDNMGRNALIHALLSSDDSDVEAITHLL 205 (285)
T ss_dssp ---------------------------------HHHHHHHHT---SCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHH
T ss_pred ---------------------------------HHHHHHHHh---cCCCCCccCCCCCCHHHHHHHccccchHHHHHHHH
Confidence 122222221 022334467789999999999999 9999999
Q ss_pred HhhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhc-CCCcccccccccccCCCchhhhHhhcCCC
Q 006173 375 MNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFN-FPNIYPFFMANIDEKRINILHIAAMSVPS 440 (658)
Q Consensus 375 l~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~-~~~~~~~~in~~D~~G~TpLHlAa~~g~~ 440 (658)
++++ .+ ++.+|..|+||||+|+..|+.+++++|++ .|+ +++.+|.+|+||||+|++.|+.
T Consensus 206 l~~g-~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~----~~~~~~~~g~t~l~~A~~~~~~ 266 (285)
T 1wdy_A 206 LDHG-AD-VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHI----EINDTDSDGKTALLLAVELKLK 266 (285)
T ss_dssp HHTT-CC-SSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSC----CTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHcC-CC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCC----CccccCCCCCcHHHHHHHcCcH
Confidence 9998 65 56779999999999999999999999999 666 7899999999999999999984
No 11
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=7.2e-36 Score=302.35 Aligned_cols=251 Identities=10% Similarity=0.034 Sum_probs=174.7
Q ss_pred ccCCCCcHHHHhhhcCCChHHHHHHHhcCCc-cccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCC
Q 006173 66 IVDQSSIFEFIVGIPDVPATLVDKLLSKVPR-NCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDP 144 (658)
Q Consensus 66 ~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~-~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~ 144 (658)
.|.+|+|||| .||..|+.++|++|++.+.. ..++.+ |..|+||||+||..|+.+++++|+++++++ +..+.
T Consensus 5 ~d~~g~t~L~-~A~~~g~~~~v~~Ll~~g~~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~----- 76 (282)
T 1oy3_D 5 VTEDGDTALH-LAVIHQHEPFLDFLLGFSAGHEYLDLQ-NDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAER----- 76 (282)
T ss_dssp CCTTCCCHHH-HHHHTTCHHHHHHHHHHHTTSGGGGCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCT-----
T ss_pred cCCCCCcHHH-HHHHcCCHHHHHHHHhcCCCccccccc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCC-----
Confidence 3889999999 99999999999999988532 347888 999999999999999999999999999886 44555
Q ss_pred CCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCCC--------------CCCCcchhHHHHHHhcCcHHHHHHHHHhCCC
Q 006173 145 NIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTREP--------------LDGRQGFVLLKFLIDSNLFDMALALLKCHPM 210 (658)
Q Consensus 145 ~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~~--------------~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~ 210 (658)
. |.||||+|+..|+.+++++|+++++.. .....+.++++.+...+.......++.....
T Consensus 77 ------~-g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (282)
T 1oy3_D 77 ------G-GHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRL 149 (282)
T ss_dssp ------T-SCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGG
T ss_pred ------C-CCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhh
Confidence 6 999999999999999999999988731 2334566777777776665555555544455
Q ss_pred ccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCCCCCchhhhhhhhHHHHHHHHHHhh
Q 006173 211 IARADIGETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSENVGGDLEKQLSVTSKIQLKKFFLQK 290 (658)
Q Consensus 211 ~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (658)
..+.+|..|.||||+|+..++.
T Consensus 150 ~~~~~~~~g~t~L~~A~~~g~~---------------------------------------------------------- 171 (282)
T 1oy3_D 150 QLEAENYDGHTPLHVAVIHKDA---------------------------------------------------------- 171 (282)
T ss_dssp GTTCCCTTSCCHHHHHHHTTCH----------------------------------------------------------
T ss_pred cCCCcCCCCcCHHHHHHHcCCH----------------------------------------------------------
Confidence 6678899999999999998522
Q ss_pred CCCccchhHHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhhcchhhhh-cCCCcHHHHHHHhCcHH
Q 006173 291 IPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDILNTHEEAQ-NVFKKPMFKAARLGIYE 369 (658)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~-~~g~tpLh~Aa~~G~~~ 369 (658)
++++.+++.. .+.+.++ ..|+||||+|+..|+.+
T Consensus 172 -----------------------------------------~~v~~Ll~~g----~~~~~~~~~~g~tpL~~A~~~~~~~ 206 (282)
T 1oy3_D 172 -----------------------------------------EMVRLLRDAG----ADLNKPEPTCGRTPLHLAVEAQAAS 206 (282)
T ss_dssp -----------------------------------------HHHHHHHHHT----CCTTCCCTTTCCCHHHHHHHTTCHH
T ss_pred -----------------------------------------HHHHHHHHcC----CCCCCCCCCCCcCHHHHHHHcCCHH
Confidence 2222333222 2223344 34999999999999999
Q ss_pred HHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhcCCCcccccccccccCCCchhhhHhhcCCC
Q 006173 370 IVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPNIYPFFMANIDEKRINILHIAAMSVPS 440 (658)
Q Consensus 370 ~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~ 440 (658)
++++|++++ .+ ++.+|..|+||||+|+.+++.+++++|++.|+ +++.+|.+|.|||++|....+.
T Consensus 207 ~v~~Ll~~g-ad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~tpl~~a~~~~~~ 271 (282)
T 1oy3_D 207 VLELLLKAG-AD-PTARMYGGRTPLGSALLRPNPILARLLRAHGA----PEPEDGGDKLSPCSSSGSDSDS 271 (282)
T ss_dssp HHHHHHHTT-CC-TTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTC----CCCCCC----------------
T ss_pred HHHHHHHcC-CC-CcccccCCCCHHHHHHHcCCcHHHHHHHHcCC----CcCcCCCcccccccccCCcccc
Confidence 999999999 65 56789999999999999999999999999999 7899999999999999987653
No 12
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=6.8e-36 Score=315.55 Aligned_cols=260 Identities=13% Similarity=0.082 Sum_probs=210.0
Q ss_pred hhhhhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHH--------hcCCccccc
Q 006173 29 IKDIDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLL--------SKVPRNCLQ 100 (658)
Q Consensus 29 ~~~~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll--------~~~~~~~l~ 100 (658)
.++..+.+|||.|+..|+ +.++.++ .. .++...+.+|+|||| .||..|+.++|+.|+ +. +. +++
T Consensus 89 ~~~~~g~t~L~~Aa~~~~-~~~~~L~-~~---~~n~~d~~~g~t~Lh-~Aa~~g~~~~v~~Ll~~~~~~ll~~-ga-~vn 160 (373)
T 2fo1_E 89 EPEPESPIKLHTEAAGSY-AITEPIT-RE---SVNIIDPRHNRTVLH-WIASNSSAEKSEDLIVHEAKECIAA-GA-DVN 160 (373)
T ss_dssp -----CCCHHHHHHHSSS-CCCSCCS-TT---TTTTCCCSSCCCHHH-HHHCTTCCSCCTTHHHHHHHHHHHT-CC-CTT
T ss_pred CCCCCCccHHHHHhcCCc-hHHHHhc-cc---cccccCCcCCCCHHH-HHHHCCCHHHHHHHHHHHHHHHHhc-CC-CCc
Confidence 456678999999999554 6666655 32 344443478999999 999999999998887 45 33 378
Q ss_pred cccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCC---C
Q 006173 101 NFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKT---R 177 (658)
Q Consensus 101 ~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~---~ 177 (658)
.. |..|.||||+|+..|+.++|++|++.++++ +..+. . |.||||+|+..|+.+++++|++++ .
T Consensus 161 ~~-d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~~-----------~-g~t~L~~A~~~g~~~~v~~Ll~~~~~~~ 226 (373)
T 2fo1_E 161 AM-DCDENTPLMLAVLARRRRLVAYLMKAGADP-TIYNK-----------S-ERSALHQAAANRDFGMMVYMLNSTKLKG 226 (373)
T ss_dssp CC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCT-----------T-CCCHHHHHHHTTCHHHHHHHTTSHHHHH
T ss_pred CC-CCCCCCHHHHHHHcChHHHHHHHHHCCCCC-cccCC-----------C-CCCHHHHHHHCCCHHHHHHHHhcCcccc
Confidence 88 999999999999999999999999999886 44555 6 999999999999999999999997 3
Q ss_pred -CCCCCCcchhHHHHHHhcC---cHHHHHHHHHhCCCccc-------cccCCCCcHhHHHhcCCCCCCCCCCcchhhhhh
Q 006173 178 -EPLDGRQGFVLLKFLIDSN---LFDMALALLKCHPMIAR-------ADIGETGKILESLSKRPKAFASGSRLGSWKRLL 246 (658)
Q Consensus 178 -~~~~~~~g~t~Lh~A~~~g---~~~iv~~LL~~~~~~~~-------~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i 246 (658)
....|..|.||||+|+..+ +.+++++|++.+.+... .+|..|.||||+|+..++.
T Consensus 227 ~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~-------------- 292 (373)
T 2fo1_E 227 DIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNM-------------- 292 (373)
T ss_dssp TTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCH--------------
T ss_pred ChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCH--------------
Confidence 4678999999999999998 89999999999765432 3677899999999998632
Q ss_pred cccccccccCCCCCCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHhhhh
Q 006173 247 YQWIPIQEEYNPHPHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAKII 326 (658)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 326 (658)
T Consensus 293 -------------------------------------------------------------------------------- 292 (373)
T 2fo1_E 293 -------------------------------------------------------------------------------- 292 (373)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHhhhhhhcchhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHH
Q 006173 327 HEQTLEILRIMCAGAVDILNTHEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVF 406 (658)
Q Consensus 327 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv 406 (658)
++++.+++.. ..+.+.+|..|+||||+|+..|+.+++++|++++ .+ ++.+|..|+||||+|+.+|+.+++
T Consensus 293 -----~~v~~Ll~~~---~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g-ad-~~~~d~~g~t~l~~A~~~g~~~iv 362 (373)
T 2fo1_E 293 -----PIVKYLVGEK---GSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQG-AS-VEAVDATDHTARQLAQANNHHNIV 362 (373)
T ss_dssp -----HHHHHHHHHS---CCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CC-SSCCCSSSCCHHHHHHHTTCHHHH
T ss_pred -----HHHHHHHHhc---CCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CC-ccCCCCCCCCHHHHHHHcCCHHHH
Confidence 2222232211 1334457788999999999999999999999998 65 567899999999999999999999
Q ss_pred HHHhcCCC
Q 006173 407 NIIFNFPN 414 (658)
Q Consensus 407 ~~Ll~~~~ 414 (658)
++|++.++
T Consensus 363 ~~Ll~~~a 370 (373)
T 2fo1_E 363 DIFDRCRP 370 (373)
T ss_dssp HHHHTTC-
T ss_pred HHHHhcCc
Confidence 99999976
No 13
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1e-35 Score=313.30 Aligned_cols=269 Identities=10% Similarity=-0.006 Sum_probs=214.5
Q ss_pred hhhhhhhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCC
Q 006173 27 KIIKDIDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDE 106 (658)
Q Consensus 27 ~~~~~~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~ 106 (658)
.+..+..+++|||.||..|+.+.++.|+ +. +..++.+ +..|+|||| +||..|+.++|++|++.+. +.. +.+
T Consensus 13 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll-~~-g~~~~~~-d~~g~t~L~-~A~~~g~~~~v~~Ll~~g~----~~~-~~~ 83 (364)
T 3ljn_A 13 RIKSDDENMEKIHVAARKGQTDEVRRLI-ET-GVSPTIQ-NRFGCTALH-LACKFGCVDTAKYLASVGE----VHS-LWH 83 (364)
T ss_dssp ---CCHHHHHHHHHHHHHTCHHHHHHHH-HT-TCCTTCC-CTTCCCHHH-HHHHHCCHHHHHHHHHHCC----CCC-CBT
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHH-Hc-CCCcccc-CCCCCcHHH-HHHHcCCHHHHHHHHHCCC----Ccc-ccC
Confidence 3455678999999999999999999999 44 4445544 889999999 9999999999999999954 233 568
Q ss_pred CChHHHHHHhcCCHHHHHHHHhc----CCCCCccccc------CCCCCCCcccCCCCCcHHHHHHHhC--cHHHHHHhcc
Q 006173 107 GSEYMEYAVSTGKLNLITTLMGY----NEELPNIKVE------KKDDPNIKDEEKDDLLPVHMAAKAG--KRDAVRHLLP 174 (658)
Q Consensus 107 G~TpLh~Aa~~G~~~iv~~Ll~~----~~~l~~~~~~------~~~d~~~~~~~~~G~TpLh~Aa~~g--~~~iv~~Ll~ 174 (658)
|.||||+|+..|+.+++++|++. +.+....... ...+++.++. . |.||||+|+..| +.++|++|++
T Consensus 84 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-g~t~L~~A~~~g~~~~~~v~~Ll~ 161 (364)
T 3ljn_A 84 GQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHC-K-GQTALHWCVGLGPEYLEMIKILVQ 161 (364)
T ss_dssp TBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEE-S-CCCHHHHHHHSCGGGHHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCC-C-CCCHHHHHHHcCCchHHHHHHHHH
Confidence 99999999999999999999998 5543221000 0011222333 6 999999999999 9999999999
Q ss_pred CCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhhhccccccc
Q 006173 175 KTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQ 253 (658)
Q Consensus 175 ~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~ 253 (658)
++++ +..|..|.||||+|+..|+.+++++|++.+++....
T Consensus 162 ~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--------------------------------------- 202 (364)
T 3ljn_A 162 LGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSL--------------------------------------- 202 (364)
T ss_dssp HTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSC---------------------------------------
T ss_pred cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccc---------------------------------------
Confidence 9985 678999999999999999999999999986542000
Q ss_pred ccCCCCCCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHH
Q 006173 254 EEYNPHPHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEI 333 (658)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 333 (658)
T Consensus 203 -------------------------------------------------------------------------------- 202 (364)
T 3ljn_A 203 -------------------------------------------------------------------------------- 202 (364)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhhhhhcchhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhcCC
Q 006173 334 LRIMCAGAVDILNTHEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFP 413 (658)
Q Consensus 334 l~~l~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~ 413 (658)
+.+.+|..|+||||+|+..|+.+++++|++++ .+ ++.+|..|+||||+|+..|+.+++++|++.+
T Consensus 203 -------------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-ad-~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~ 267 (364)
T 3ljn_A 203 -------------RLDYANKQGNSHLHWAILINWEDVAMRFVEMG-ID-VNMEDNEHTVPLYLSVRAAMVLLTKELLQKT 267 (364)
T ss_dssp -------------CTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTT-CC-TTCCCTTSCCHHHHHHHTCCHHHHHHHHHHS
T ss_pred -------------cccccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CC-CCCCCCCCCCHHHHHHHhChHHHHHHHHHcC
Confidence 00114556889999999999999999999998 66 5678999999999999999999999999997
Q ss_pred Cccc--------ccccccccCCCchhhhHhhcCCC
Q 006173 414 NIYP--------FFMANIDEKRINILHIAAMSVPS 440 (658)
Q Consensus 414 ~~~~--------~~in~~D~~G~TpLHlAa~~g~~ 440 (658)
+... ......|..|+|||++|+..|+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~ 302 (364)
T 3ljn_A 268 DVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSK 302 (364)
T ss_dssp CHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHH
T ss_pred CchhhhcCcccCcccccccccccccchhhhhccCH
Confidence 6321 11223788999999999988863
No 14
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1e-35 Score=296.72 Aligned_cols=220 Identities=13% Similarity=0.102 Sum_probs=160.4
Q ss_pred cccccCCCCChHHHHHHhcC-------------CHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCc
Q 006173 99 LQNFARDEGSEYMEYAVSTG-------------KLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGK 165 (658)
Q Consensus 99 l~~~~d~~G~TpLh~Aa~~G-------------~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~ 165 (658)
++.+ |.+|+||||+|+..| +.++++.|++.++++....+. . |+||||+|+..|+
T Consensus 3 vn~~-d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~-----------~-g~t~L~~A~~~g~ 69 (253)
T 1yyh_A 3 VNVR-GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDR-----------T-GETALHLAARYSR 69 (253)
T ss_dssp --------------------------------------------------CCCT-----------T-SCCHHHHHHHTTC
T ss_pred CCCC-CCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCC-----------C-CCcHHHHHHHcCC
Confidence 5566 788888888888766 899999999999988666666 6 9999999999999
Q ss_pred HHHHHHhccCCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhh
Q 006173 166 RDAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKR 244 (658)
Q Consensus 166 ~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~ 244 (658)
.++|++|++++++ ...|..|.||||+|+..|+.++++.|++.++...+.+|.+|.||||+|+..++. .
T Consensus 70 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~-------~---- 138 (253)
T 1yyh_A 70 SDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVE-------G---- 138 (253)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCS-------S----
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChH-------H----
Confidence 9999999999985 678899999999999999999999999998877888999999999999988532 1
Q ss_pred hhcccccccccCCCCCCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHhh
Q 006173 245 LLYQWIPIQEEYNPHPHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAK 324 (658)
Q Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 324 (658)
T Consensus 139 -------------------------------------------------------------------------------- 138 (253)
T 1yyh_A 139 -------------------------------------------------------------------------------- 138 (253)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHHHHHhhhhhhcchhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHh
Q 006173 325 IIHEQTLEILRIMCAGAVDILNTHEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREK 404 (658)
Q Consensus 325 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~ 404 (658)
+++.+++ ...+.+.+|..|+||||+|+..|+.+++++|++++ .+ ++.+|..|+||||+|+..|+.+
T Consensus 139 --------~v~~Ll~----~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~-~~~~~~~g~tpL~~A~~~~~~~ 204 (253)
T 1yyh_A 139 --------MLEDLIN----SHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG-AN-KDMQNNREETPLFLAAREGSYE 204 (253)
T ss_dssp --------HHHHHHH----TTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT-CC-TTCCCTTSCCHHHHHHHHTCHH
T ss_pred --------HHHHHHH----cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CC-CCCcCCCCCCHHHHHHHCCCHH
Confidence 1112222 22233446778999999999999999999999998 65 5677999999999999999999
Q ss_pred HHHHHhcCCCcccccccccccCCCchhhhHhhcCCC
Q 006173 405 VFNIIFNFPNIYPFFMANIDEKRINILHIAAMSVPS 440 (658)
Q Consensus 405 iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~ 440 (658)
++++|++.|+ +++.+|..|+||||+|++.|+.
T Consensus 205 ~v~~Ll~~ga----~~~~~d~~g~tpl~~A~~~g~~ 236 (253)
T 1yyh_A 205 TAKVLLDHFA----NRDITDHMDRLPRDIAQERMHH 236 (253)
T ss_dssp HHHHHHHTTC----CTTCCCTTCCCHHHHHHHTTCH
T ss_pred HHHHHHHcCC----CccccccCCCCHHHHHHHcCCH
Confidence 9999999998 7789999999999999999984
No 15
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=7.2e-35 Score=285.41 Aligned_cols=212 Identities=15% Similarity=0.205 Sum_probs=182.0
Q ss_pred CCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcC--CCCCcccccCCCCCCCc
Q 006173 70 SSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYN--EELPNIKVEKKDDPNIK 147 (658)
Q Consensus 70 g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~--~~l~~~~~~~~~d~~~~ 147 (658)
|+|||| .||..|+.++|+.|++. .++..+.. |..|.||||+|+..|+.+++++|++.+ +++....+.
T Consensus 2 g~t~L~-~A~~~g~~~~v~~Ll~~-~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~-------- 70 (228)
T 2dzn_A 2 SNYPLH-QACMENEFFKVQELLHS-KPSLLLQK-DQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDD-------- 70 (228)
T ss_dssp -CCHHH-HHHHTTCHHHHHHHHHH-CGGGTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCT--------
T ss_pred CccHHH-HHHHhCCHHHHHHHHhc-CccccccC-CCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCC--------
Confidence 789999 99999999999999999 44546667 999999999999999999999999998 443332444
Q ss_pred ccCCCCCcHHHHHHHhCcHHHHHHhccCC--CC-CCCCCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhH
Q 006173 148 DEEKDDLLPVHMAAKAGKRDAVRHLLPKT--RE-PLDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILE 224 (658)
Q Consensus 148 ~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~--~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh 224 (658)
. |.||||+|+..|+.+++++|++++ ++ ...+..|.||||+|+..|+.++++.|++++.+. +.
T Consensus 71 ---~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~---------- 135 (228)
T 2dzn_A 71 ---S-GWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASV-RI---------- 135 (228)
T ss_dssp ---T-SCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-CC----------
T ss_pred ---C-CCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCc-cc----------
Confidence 5 999999999999999999999998 43 577888999999999999999999999874322 11
Q ss_pred HHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHH
Q 006173 225 SLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKF 304 (658)
Q Consensus 225 ~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (658)
T Consensus 136 -------------------------------------------------------------------------------- 135 (228)
T 2dzn_A 136 -------------------------------------------------------------------------------- 135 (228)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhhcchhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCccc
Q 006173 305 VLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDILNTHEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLE 384 (658)
Q Consensus 305 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~ 384 (658)
+|..|.||||+|+..|+.+++++|++.+ +..++
T Consensus 136 ----------------------------------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~ 168 (228)
T 2dzn_A 136 ----------------------------------------------KDKFNQIPLHRAASVGSLKLIELLCGLG-KSAVN 168 (228)
T ss_dssp ----------------------------------------------CCTTSCCHHHHHHHTTCHHHHHHHHTTT-CCCSC
T ss_pred ----------------------------------------------cCCCCCCHHHHHHHcCCHHHHHHHHhcC-ccccc
Confidence 3345889999999999999999999999 88888
Q ss_pred ccccCCChHHHHHHHhCCHhHHHHHh-cCCCcccccccccccCCCchhhhHhhcC
Q 006173 385 FKNKDGYDIFKVAVEHRREKVFNIIF-NFPNIYPFFMANIDEKRINILHIAAMSV 438 (658)
Q Consensus 385 ~~d~~G~T~Lh~A~~~~~~~iv~~Ll-~~~~~~~~~in~~D~~G~TpLHlAa~~g 438 (658)
.+|..|+||||+|+..|+.+++++|+ +.|+ +++.+|.+|+||||+|++.+
T Consensus 169 ~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga----~~~~~~~~g~t~l~~A~~~~ 219 (228)
T 2dzn_A 169 WQDKQGWTPLFHALAEGHGDAAVLLVEKYGA----EYDLVDNKGAKAEDVALNEQ 219 (228)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHHCC----CSCCBCTTSCBGGGGCSSTT
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC----CCCccCCCCCcHHHHHHHHH
Confidence 89999999999999999999999999 7887 78999999999999998653
No 16
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=7e-36 Score=305.44 Aligned_cols=264 Identities=13% Similarity=0.112 Sum_probs=208.2
Q ss_pred HHHHhCCHHHHHHHHhhcCccc-------ccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHH
Q 006173 40 RYILENDWKGLEDYIMSKTPNA-------LTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYME 112 (658)
Q Consensus 40 ~A~~~G~~~~v~~ll~~~~~~~-------~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh 112 (658)
.++.+|..+.++.++ ...... .....+.+|.|||| .||..|+.++|+.|++.+ .+ ++.. |..|.||||
T Consensus 4 ~~a~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~t~l~-~A~~~g~~~~v~~Ll~~g-~~-~~~~-~~~g~t~L~ 78 (299)
T 1s70_B 4 ADAKQKRNEQLKRWI-GSETDLEPPVVKRKKTKVKFDDGAVFL-AACSSGDTEEVLRLLERG-AD-INYA-NVDGLTALH 78 (299)
T ss_dssp HHHHHHHHHHHHHHH-HTTTSSCCSCCCCSCCCCEECHHHHHH-HHHHHTCHHHHHHHHHHC-CC-TTCB-CTTCCBHHH
T ss_pred hHHHHHHHHHHHHHH-ccccccccccccCcccccccCCccHHH-HHHHcCCHHHHHHHHHcC-CC-Cccc-CCCCCCHHH
Confidence 468888889999988 433221 11123456789999 999999999999999994 33 7788 999999999
Q ss_pred HHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHH
Q 006173 113 YAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKF 191 (658)
Q Consensus 113 ~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~ 191 (658)
+||..|+.+++++|++.++++ +..+. . |.||||+|+..|+.++|++|++++++ ...+..|.||||+
T Consensus 79 ~A~~~g~~~~v~~Ll~~ga~~-~~~~~-----------~-g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~ 145 (299)
T 1s70_B 79 QACIDDNVDMVKFLVENGANI-NQPDN-----------E-GWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDI 145 (299)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT-TCCCT-----------T-SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCC-CCCCC-----------C-CCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHH
Confidence 999999999999999998886 44455 6 99999999999999999999999985 6788999999999
Q ss_pred HHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCCCCCch
Q 006173 192 LIDSNLFDMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSENVGGDL 271 (658)
Q Consensus 192 A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (658)
|+..++.++++.++...+......+..+.++++
T Consensus 146 A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~----------------------------------------------- 178 (299)
T 1s70_B 146 AEEEAMEELLQNEVNRQGVDIEAARKEEERIML----------------------------------------------- 178 (299)
T ss_dssp CCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH-----------------------------------------------
T ss_pred HHhcchHHHHHHHHhhcCCCchhhhhhhhhHHH-----------------------------------------------
Confidence 999999999999887644332221111111111
Q ss_pred hhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhhcchhhh
Q 006173 272 EKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDILNTHEEA 351 (658)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~ 351 (658)
..+..+... ........
T Consensus 179 ------------------------------------------------------------~~~~~~l~~---~~~~~~~~ 195 (299)
T 1s70_B 179 ------------------------------------------------------------RDARQWLNS---GHINDVRH 195 (299)
T ss_dssp ------------------------------------------------------------HHHHHHHHH---TCCCCCCC
T ss_pred ------------------------------------------------------------HHHHHHHhc---cCcchhhh
Confidence 001111111 11122235
Q ss_pred hcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhcCCCcccccccccccCCCchh
Q 006173 352 QNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPNIYPFFMANIDEKRINIL 431 (658)
Q Consensus 352 ~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~in~~D~~G~TpL 431 (658)
+..|.||||+|+..|+.+++++|++++ .+ ++.+|..|+||||+|+..|+.+++++|++.|+ +++.+|..|+|||
T Consensus 196 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~d-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga----d~~~~d~~g~t~l 269 (299)
T 1s70_B 196 AKSGGTALHVAAAKGYTEVLKLLIQAR-YD-VNIKDYDGWTPLHAAAHWGKEEACRILVENLC----DMEAVNKVGQTAF 269 (299)
T ss_dssp TTTCCCHHHHHHHHTCHHHHHHHHTTT-CC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCTT
T ss_pred cCCCCCHHHHHHHCCcHHHHHHHHHcC-CC-CCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCC----CCCCcCCCCCCHH
Confidence 667999999999999999999999998 65 56789999999999999999999999999998 7899999999999
Q ss_pred hhHhhc
Q 006173 432 HIAAMS 437 (658)
Q Consensus 432 HlAa~~ 437 (658)
|+|++.
T Consensus 270 ~~A~~~ 275 (299)
T 1s70_B 270 DVADED 275 (299)
T ss_dssp TSCCSG
T ss_pred HHHHHH
Confidence 999754
No 17
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=5.4e-35 Score=292.88 Aligned_cols=241 Identities=12% Similarity=0.031 Sum_probs=200.3
Q ss_pred CCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcc
Q 006173 69 QSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKD 148 (658)
Q Consensus 69 ~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~ 148 (658)
+|+|||| .||..|+.++|+.|++.+ .+ ++.. |..|.||||+||..|+.+++++|++.++++ +..+.
T Consensus 2 ~g~t~L~-~A~~~g~~~~v~~Ll~~g-~~-~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~--------- 67 (261)
T 2xai_A 2 SDWSPMH-EAAIHGHQLSLRNLISQG-WA-VNII-TADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTA--------- 67 (261)
T ss_dssp --CCHHH-HHHHHTCHHHHHHHHHTT-CC-SSCC-CTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT---------
T ss_pred CCCCHHH-HHHHcCCHHHHHHHHHCC-CC-CCCc-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCC---------
Confidence 6899999 999999999999999984 33 7888 999999999999999999999999998875 44455
Q ss_pred cCCCCCcHHHHHHHhCcHHHHHHhccCCCCCCCCCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhc
Q 006173 149 EEKDDLLPVHMAAKAGKRDAVRHLLPKTREPLDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILESLSK 228 (658)
Q Consensus 149 ~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~ 228 (658)
. |+||||+|+..|+.+++++|++++++...+..|.||||+|+..|+.++++.|++.+.+. +.
T Consensus 68 --~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~-------------- 129 (261)
T 2xai_A 68 --D-WHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNI-DH-------------- 129 (261)
T ss_dssp --T-SCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TC--------------
T ss_pred --C-CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-Cc--------------
Confidence 6 99999999999999999999999997767778999999999999999999999874322 11
Q ss_pred CCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHh
Q 006173 229 RPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWN 308 (658)
Q Consensus 229 ~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (658)
T Consensus 130 -------------------------------------------------------------------------------- 129 (261)
T 2xai_A 130 -------------------------------------------------------------------------------- 129 (261)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhhcchhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCccccccc
Q 006173 309 NLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDILNTHEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNK 388 (658)
Q Consensus 309 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~ 388 (658)
+|..|.||||+|+..|+.++++.|++++ .+.. .|.
T Consensus 130 ------------------------------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~--~~~ 164 (261)
T 2xai_A 130 ------------------------------------------KISHLGTPLYLACENQQRACVKKLLESG-ADVN--QGK 164 (261)
T ss_dssp ------------------------------------------CBTTTBCHHHHHHHTTCHHHHHHHHHHT-CCTT--CCB
T ss_pred ------------------------------------------CCCCCCCHHHHHHHhCCHHHHHHHHHcC-CCCC--CCC
Confidence 3345779999999999999999999999 7654 388
Q ss_pred CCChHHHHHHHhCCHhHHHHHhcCCCcccccccccccCCCchhhhHhhcCCCCCCChhHHhhHHHHHHHHHHHhhcCc--
Q 006173 389 DGYDIFKVAVEHRREKVFNIIFNFPNIYPFFMANIDEKRINILHIAAMSVPSTEVPGAALQMQRELQWFKAVENCVHP-- 466 (658)
Q Consensus 389 ~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~v~~~~l~~~~~l~~~~~v~~~~~~-- 466 (658)
.|+||||+|+..++.+++++|++.|+ +++.+|.+|+||||+|+..++. + +.+ ++...++
T Consensus 165 ~g~t~Lh~A~~~~~~~~v~~Ll~~ga----d~~~~d~~g~tpl~~A~~~~~~--~--------~~l-----l~~~~~~~l 225 (261)
T 2xai_A 165 GQDSPLHAVARTASEELACLLMDFGA----DTQAKNAEGKRPVELVPPESPL--A--------QLF-----LEREGPPSL 225 (261)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTTC----CTTCCCTTSCCGGGGSCTTCTH--H--------HHH-----HHC-CCCCH
T ss_pred CCCChHHHHHHcCCHHHHHHHHHcCC----CCCCcCCCCCChhhhccccccH--H--------HHH-----HhccCCccH
Confidence 99999999999999999999999998 7899999999999999966541 0 000 0111111
Q ss_pred ---chhhhccCCCCCchhhhHH
Q 006173 467 ---TLQDQLNDKDKTPREVFTK 485 (658)
Q Consensus 467 ---~~~~~~n~~G~Tp~dl~~~ 485 (658)
.....+|..|+||++.+.+
T Consensus 226 ~~~~~~~~r~~~g~t~l~~~~~ 247 (261)
T 2xai_A 226 MQLCRLRIRKCFGIQQHHKITK 247 (261)
T ss_dssp HHHHHHHHHTTSCTTCGGGGGG
T ss_pred HHHHHHHHHHHhchhccccCcc
Confidence 1256789999999998754
No 18
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=7e-35 Score=290.64 Aligned_cols=228 Identities=15% Similarity=0.147 Sum_probs=129.2
Q ss_pred hhhhhhHHHHHHHHhC-------------CHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCc
Q 006173 30 KDIDSYKQVTRYILEN-------------DWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPR 96 (658)
Q Consensus 30 ~~~~~~~~L~~A~~~G-------------~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~ 96 (658)
.+.+++||||.|+..| +.+.++.++ +.. ..++...+.+|+|||| .||..|+.++|++|++.+ .
T Consensus 6 ~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll-~~g-~~~~~~~d~~g~t~L~-~A~~~g~~~~v~~Ll~~g-~ 81 (253)
T 1yyh_A 6 RGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFI-YQG-ASLHNQTDRTGETALH-LAARYSRSDAAKRLLEAS-A 81 (253)
T ss_dssp ------------------------------------------------CCCTTSCCHHH-HHHHTTCHHHHHHHHHTT-C
T ss_pred CCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHH-Hcc-CCcccccCCCCCcHHH-HHHHcCCHHHHHHHHHcC-C
Confidence 3445666666666655 555666655 322 2232333555666666 666666666666666652 2
Q ss_pred cccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCC
Q 006173 97 NCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKT 176 (658)
Q Consensus 97 ~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~ 176 (658)
+ ++.. |..|.||||+|+..|+.+++++|++.++......+. . |.||||+|+..|+.+++++|++++
T Consensus 82 ~-~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-----------~-g~t~L~~A~~~~~~~~v~~Ll~~g 147 (253)
T 1yyh_A 82 D-ANIQ-DNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMH-----------D-GTTPLILAARLAVEGMLEDLINSH 147 (253)
T ss_dssp C-TTCC-CTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCT-----------T-CCCHHHHHHHHTCSSHHHHHHHTT
T ss_pred C-CCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCC-----------C-CCcHHHHHHHcChHHHHHHHHHcC
Confidence 2 4455 566666666666666666666666655533334443 4 666666666666666666666665
Q ss_pred CC-CCCCCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhhhccccccccc
Q 006173 177 RE-PLDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEE 255 (658)
Q Consensus 177 ~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~ 255 (658)
++ +..|..|.||||+|+..|+.++++.|++.+.+
T Consensus 148 ~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~--------------------------------------------- 182 (253)
T 1yyh_A 148 ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN--------------------------------------------- 182 (253)
T ss_dssp CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC---------------------------------------------
T ss_pred CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---------------------------------------------
Confidence 53 44555566666666666666666666654221
Q ss_pred CCCCCCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHH
Q 006173 256 YNPHPHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILR 335 (658)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 335 (658)
T Consensus 183 -------------------------------------------------------------------------------- 182 (253)
T 1yyh_A 183 -------------------------------------------------------------------------------- 182 (253)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhhhhhcchhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhcCCC
Q 006173 336 IMCAGAVDILNTHEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPN 414 (658)
Q Consensus 336 ~l~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~ 414 (658)
.+.+|..|.||||+|+..|+.+++++|++++ .+ ++.+|..|+||||+|+++|+.+|+++|.....
T Consensus 183 ------------~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~-~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~ 247 (253)
T 1yyh_A 183 ------------KDMQNNREETPLFLAAREGSYETAKVLLDHF-AN-RDITDHMDRLPRDIAQERMHHDIVRLLDLEHH 247 (253)
T ss_dssp ------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHC---
T ss_pred ------------CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC-CC-ccccccCCCCHHHHHHHcCCHHHHHHHHHHhh
Confidence 1224566889999999999999999999999 66 56789999999999999999999999998743
No 19
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.8e-34 Score=284.49 Aligned_cols=213 Identities=15% Similarity=0.106 Sum_probs=173.9
Q ss_pred cCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCC
Q 006173 67 VDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNI 146 (658)
Q Consensus 67 ~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~ 146 (658)
+.+|.|||| .||..|+.+++++|++.+ .+ ++.. |..|.||||+|+..|+.+++++|++.++++ +..+.
T Consensus 8 ~~~g~t~L~-~A~~~g~~~~v~~Ll~~g-~~-~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~------- 75 (237)
T 3b7b_A 8 HQNKRSPLH-AAAEAGHVDICHMLVQAG-AN-IDTC-SEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDA------- 75 (237)
T ss_dssp SCCSCCHHH-HHHHHTCHHHHHHHHHTT-CC-TTCC-CTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCT-------
T ss_pred cCCCCCHHH-HHHHcCcHHHHHHHHHcC-CC-cCcc-CCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCC-------
Confidence 677888888 888888888888888873 33 6666 778888888888888888888888877764 33444
Q ss_pred cccCCCCCcHHHHHHHhCcHHHHHHhccCCC--CCCCCCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhH
Q 006173 147 KDEEKDDLLPVHMAAKAGKRDAVRHLLPKTR--EPLDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILE 224 (658)
Q Consensus 147 ~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~--~~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh 224 (658)
. |.||||+|+..|+.+++++|+++++ ....+..|.||||+|+..|+.++++.|++.+.+.
T Consensus 76 ----~-g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~------------- 137 (237)
T 3b7b_A 76 ----E-GSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDI------------- 137 (237)
T ss_dssp ----T-SCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-------------
T ss_pred ----C-CCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-------------
Confidence 5 8888888888888888888888874 3566777888888888888888888888764321
Q ss_pred HHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHH
Q 006173 225 SLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKF 304 (658)
Q Consensus 225 ~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (658)
T Consensus 138 -------------------------------------------------------------------------------- 137 (237)
T 3b7b_A 138 -------------------------------------------------------------------------------- 137 (237)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhhcchhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCccc
Q 006173 305 VLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDILNTHEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLE 384 (658)
Q Consensus 305 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~ 384 (658)
+.++..|.||||+|+..|+.+++++|++.+ .+ ++
T Consensus 138 --------------------------------------------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~-~~ 171 (237)
T 3b7b_A 138 --------------------------------------------NIRDNEENICLHWAAFSGCVDIAEILLAAK-CD-LH 171 (237)
T ss_dssp --------------------------------------------TCCCTTSCCHHHHHHHHCCHHHHHHHHTTT-CC-TT
T ss_pred --------------------------------------------CccCCCCCCHHHHHHHCCCHHHHHHHHHcC-CC-CC
Confidence 113456889999999999999999999999 66 56
Q ss_pred ccccCCChHHHHHHHhCCHhHHHHHhcCCCcccccccccccCCCchhhhHhhcCC
Q 006173 385 FKNKDGYDIFKVAVEHRREKVFNIIFNFPNIYPFFMANIDEKRINILHIAAMSVP 439 (658)
Q Consensus 385 ~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~ 439 (658)
.+|..|+||||+|+..++.+++++|++.|+ +++.+|.+|+||||+|++.++
T Consensus 172 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga----d~~~~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 172 AVNIHGDSPLHIAARENRYDCVVLFLSRDS----DVTLKNKEGETPLQCASLNSQ 222 (237)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTTTC----CTTCCCTTSCCHHHHSCTTCH
T ss_pred CcCCCCCCHHHHHHHhCCHhHHHHHHHcCC----CCCccCCCCCCHHHHHHHHHH
Confidence 679999999999999999999999999998 789999999999999999987
No 20
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.8e-34 Score=291.52 Aligned_cols=243 Identities=16% Similarity=0.080 Sum_probs=180.1
Q ss_pred cCCCCcHHHHhhhcCCChHHHHHHHhcCC---------ccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCccc
Q 006173 67 VDQSSIFEFIVGIPDVPATLVDKLLSKVP---------RNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIK 137 (658)
Q Consensus 67 ~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~---------~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~ 137 (658)
...|.|+|| .|+..|+.+.+..++..++ ...++.. |..|+||||+||..|+.+++++|++.++++ +..
T Consensus 12 ~~~~~~~lH-~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~ 88 (285)
T 3d9h_A 12 SGLVPRGSH-MASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGD-AVSDWSPMHEAAIHGHQLSLRNLISQGWAV-NII 88 (285)
T ss_dssp -------------------------------CCSEECCCCTTCSS-SCCSCCHHHHHHHTTCHHHHHHHHHTTCCS-CEE
T ss_pred chHHHHHHH-HHhhcCCCCCcccCCCCccccccchhhhhCcccCC-CccCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCc
Confidence 567999999 9999999777777655421 1235667 999999999999999999999999998885 555
Q ss_pred ccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHhCCCcccccc
Q 006173 138 VEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADI 216 (658)
Q Consensus 138 ~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d 216 (658)
+. . |+||||+|+..|+.++|++|++++++ ...|..|.||||+|+..|+.++++.|++.+.+..
T Consensus 89 ~~-----------~-g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---- 152 (285)
T 3d9h_A 89 TA-----------D-HVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ---- 152 (285)
T ss_dssp CT-----------T-CCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS----
T ss_pred CC-----------C-CCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCC----
Confidence 55 6 99999999999999999999999985 6789999999999999999999999998743220
Q ss_pred CCCCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccc
Q 006173 217 GETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFG 296 (658)
Q Consensus 217 ~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (658)
T Consensus 153 -------------------------------------------------------------------------------- 152 (285)
T 3d9h_A 153 -------------------------------------------------------------------------------- 152 (285)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhhcchhhhhcCCCcHHHHHHHhCcHHHHHHHHh
Q 006173 297 SLRQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDILNTHEEAQNVFKKPMFKAARLGIYEIVMGIMN 376 (658)
Q Consensus 297 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~ 376 (658)
.+..|.||||+|+..|+.+++++|++
T Consensus 153 ------------------------------------------------------~~~~g~t~L~~A~~~g~~~~v~~Ll~ 178 (285)
T 3d9h_A 153 ------------------------------------------------------PESDLASPIHEAARRGHVECVNSLIA 178 (285)
T ss_dssp ------------------------------------------------------CSCTTSCHHHHHHHHTCHHHHHHHHH
T ss_pred ------------------------------------------------------CCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 01237799999999999999999999
Q ss_pred hcCCCcccccccCCChHHHHHHHhCCHhHHHHHhcCCCcccccccccccCCCchhhhHhhcCCCCCCChhHHhhHHHHHH
Q 006173 377 SYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPNIYPFFMANIDEKRINILHIAAMSVPSTEVPGAALQMQRELQW 456 (658)
Q Consensus 377 ~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~v~~~~l~~~~~l~~ 456 (658)
.+ .+ ++.+|..|+||||+|+..|+.+++++|++.|+ ++| +|.+|+||||+|++.|+.+.+ .+
T Consensus 179 ~g-~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~~-~~~~g~t~L~~A~~~~~~~~v-----------~~ 240 (285)
T 3d9h_A 179 YG-GN-IDHKISHLGTPLYLACENQQRACVKKLLESGA----DVN-QGKGQDSPLHAVVRTASEELA-----------CL 240 (285)
T ss_dssp TT-CC-TTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTC----CTT-CCBTTBCHHHHHHHTTCHHHH-----------HH
T ss_pred CC-CC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCC----CCC-CCCCCCCHHHHHHHcCCHHHH-----------HH
Confidence 98 65 56779999999999999999999999999988 556 499999999999999984211 11
Q ss_pred HHHHHhhcCcchhhhccCCCCCchhhhHH
Q 006173 457 FKAVENCVHPTLQDQLNDKDKTPREVFTK 485 (658)
Q Consensus 457 ~~~v~~~~~~~~~~~~n~~G~Tp~dl~~~ 485 (658)
. ++ .....+.+|++|+||++++.+
T Consensus 241 L--l~---~gad~~~~d~~g~t~l~~A~~ 264 (285)
T 3d9h_A 241 L--MD---FGADTQAKNAEGKRPVELVPP 264 (285)
T ss_dssp H--HH---TTCCTTCCCTTSCCGGGGSCT
T ss_pred H--HH---CCCCCCCcCCCCCCHHHHhcC
Confidence 1 11 122367899999999999863
No 21
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=2.4e-34 Score=284.15 Aligned_cols=216 Identities=11% Similarity=0.063 Sum_probs=184.3
Q ss_pred ccCCCCcHHHHhhhcCCChHHHHHHHhcC--CccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCC
Q 006173 66 IVDQSSIFEFIVGIPDVPATLVDKLLSKV--PRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDD 143 (658)
Q Consensus 66 ~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~--~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d 143 (658)
.|.+|+|||| .||..|+.++|+.|++.. ....++.. |..|.||||+|+..|+.+++++|++.++++ ...+.
T Consensus 5 ~d~~g~t~L~-~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~---- 77 (241)
T 1k1a_A 5 ADEDGDTPLH-IAVVQGNLPAVHRLVNLFQQGGRELDIY-NNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDR---- 77 (241)
T ss_dssp --CTTCCHHH-HHHHTTCHHHHHHHHHHHHHTTCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT----
T ss_pred cCCCCCcHHH-HHHHcCCHHHHHHHHHHHHhcCCCCCcc-cccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCC----
Confidence 3889999999 999999999999999731 22347788 999999999999999999999999988875 44444
Q ss_pred CCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCC----C-CCCCCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCC
Q 006173 144 PNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTR----E-PLDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGE 218 (658)
Q Consensus 144 ~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~----~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~ 218 (658)
. |.||||+|+..|+.+++++|+++++ + ...+..|.||||+|+..|+.++++.|++.+.+...
T Consensus 78 -------~-g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~----- 144 (241)
T 1k1a_A 78 -------H-GQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDA----- 144 (241)
T ss_dssp -------T-SCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-----
T ss_pred -------C-CCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCccc-----
Confidence 5 9999999999999999999999986 2 56788899999999999999999999987543210
Q ss_pred CCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchh
Q 006173 219 TGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSL 298 (658)
Q Consensus 219 g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (658)
T Consensus 145 -------------------------------------------------------------------------------- 144 (241)
T 1k1a_A 145 -------------------------------------------------------------------------------- 144 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhhcchhhhh-cCCCcHHHHHHHhCcHHHHHHHHhh
Q 006173 299 RQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDILNTHEEAQ-NVFKKPMFKAARLGIYEIVMGIMNS 377 (658)
Q Consensus 299 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~-~~g~tpLh~Aa~~G~~~~v~~Ll~~ 377 (658)
.+ ..|.||||+|+..|+.+++++|+++
T Consensus 145 ----------------------------------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 172 (241)
T 1k1a_A 145 ----------------------------------------------------VDIKSGRSPLIHAVENNSLSMVQLLLQH 172 (241)
T ss_dssp ----------------------------------------------------CCTTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred ----------------------------------------------------ccccCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 11 3478999999999999999999999
Q ss_pred cCCCcccccccCCChHHHHHHHhCCHhHHHHHhcCCCcccccccccccCCCchhhhHhhcCC
Q 006173 378 YFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPNIYPFFMANIDEKRINILHIAAMSVP 439 (658)
Q Consensus 378 ~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~ 439 (658)
+ .+ ++.+|..|+||||+|+..|+.+++++|++.|+ +++.+|.+|+||||+|+..|+
T Consensus 173 g-~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~tpl~~A~~~~~ 228 (241)
T 1k1a_A 173 G-AN-VNAQMYSGSSALHSASGRGLLPLVRTLVRSGA----DSSLKNCHNDTPLMVARSRRV 228 (241)
T ss_dssp T-CC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC----CTTCCCTTSCCTTTTCSSHHH
T ss_pred C-CC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCC----CCCCcCCCCCCHHHHHHhcCc
Confidence 8 65 56679999999999999999999999999998 778999999999999998876
No 22
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.4e-33 Score=293.74 Aligned_cols=263 Identities=12% Similarity=0.051 Sum_probs=211.7
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHH
Q 006173 33 DSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYME 112 (658)
Q Consensus 33 ~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh 112 (658)
.++||||.||..|+.+.|+.|| +++...+.+ +..+.+++| .++..++.+++..+++. ..+ ++.. |..|.||||
T Consensus 58 ~g~TpLh~A~~~g~~~iv~~Ll--~~ga~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~-~~~~-d~~g~t~l~ 130 (337)
T 4g8k_A 58 GGWTPLHNAVQMSREDIVELLL--RHGADPVLR-KKNGATPFI-LAAIAGSVKLLKLFLSK-GAD-VNEC-DFYGFTAFM 130 (337)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHH--HTTCCTTCC-CTTCCCHHH-HHHHHTCHHHHHHHHTT-TCC-TTCB-CTTCCBHHH
T ss_pred CCcCHHHHHHHcCCHHHHHHHH--HcCCchhhh-ccCCCchhH-HHHhcccchhhHHhhhc-cch-hhhh-ccCCCCHHH
Confidence 4789999999999999999999 455555544 888999999 99999999999999988 433 7888 999999999
Q ss_pred HHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccC-CCC-CCCCCcchhHHH
Q 006173 113 YAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPK-TRE-PLDGRQGFVLLK 190 (658)
Q Consensus 113 ~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~-~~~-~~~~~~g~t~Lh 190 (658)
+|+..|+.+++++|++.++++ +.......+++..+. . |.||||+|+..|+.++|++|+++ +++ +..|..|.|++|
T Consensus 131 ~A~~~~~~~~~~~ll~~ga~~-~~~~~~~~~~~~~~~-~-g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~ 207 (337)
T 4g8k_A 131 EAAVYGKVKALKFLYKRGANV-NLRRKTKEDQERLRK-G-GATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALI 207 (337)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT-TCCCCCC-----CTT-C-SCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHH
T ss_pred HHHHcCcHHHHHHHHHcCCCc-chhhccccccccccC-C-CCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHH
Confidence 999999999999999999886 333333444555555 6 99999999999999999999964 664 678999999999
Q ss_pred HHHhcCc----HHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCC
Q 006173 191 FLIDSNL----FDMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSEN 266 (658)
Q Consensus 191 ~A~~~g~----~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~ 266 (658)
.++..+. .+++++|++++. .++.+|.+|.||||+|++.++.
T Consensus 208 ~~~~~~~~~~~~~i~~lLl~~ga-d~n~~d~~g~t~L~~a~~~~~~---------------------------------- 252 (337)
T 4g8k_A 208 HALLSSDDSDVEAITHLLLDHGA-DVNVRGERGKTPLILAVEKKHL---------------------------------- 252 (337)
T ss_dssp HHHHHSCTTTHHHHHHHHHHTTC-CTTCCCGGGCCHHHHHHHTTCH----------------------------------
T ss_pred HHHHHcCcccHHHHHHHHHHCCC-CCCCcCCCCCCHHHHHHHhhhh----------------------------------
Confidence 8876543 457788888754 4578899999999999998532
Q ss_pred CCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhhc
Q 006173 267 VGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDILN 346 (658)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~ 346 (658)
+.++.++. ....
T Consensus 253 -----------------------------------------------------------------~~v~~Ll~---~~~~ 264 (337)
T 4g8k_A 253 -----------------------------------------------------------------GLVQRLLE---QEHI 264 (337)
T ss_dssp -----------------------------------------------------------------HHHHHHHT---STTC
T ss_pred -----------------------------------------------------------------HHHHHHHH---hcCC
Confidence 11111111 1122
Q ss_pred chhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhcCCCc
Q 006173 347 THEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPNI 415 (658)
Q Consensus 347 ~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~ 415 (658)
+.+.+|..|+||||+|++.|+.++|++|++++ .+ .+++||||+|+.+|+.++|++|+++|++
T Consensus 265 ~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G-Ad------~n~~~~L~~A~~~~~~~iv~~Ll~~GA~ 326 (337)
T 4g8k_A 265 EINDTDSDGKTALLLAVELKLKKIAELLCKRG-AS------TDCGDLVMTARRNYDHSLVKVLLSHGAK 326 (337)
T ss_dssp CTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTS-CS------STTCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred cccCcCCCCCCHHHHHHHcCCHHHHHHHHHCC-CC------CCCCCHHHHHHHcCCHHHHHHHHHCcCC
Confidence 34457888999999999999999999999999 54 3567899999999999999999999993
No 23
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=2.3e-34 Score=291.26 Aligned_cols=253 Identities=14% Similarity=0.066 Sum_probs=175.0
Q ss_pred cccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCC--CcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCC
Q 006173 99 LQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEEL--PNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKT 176 (658)
Q Consensus 99 l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l--~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~ 176 (658)
++.. |.+|+||||+||..|+.++|++|++.+++. .+..+. . |+||||+||..|+.++|++|++++
T Consensus 2 ~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~-----------~-g~t~L~~A~~~g~~~~v~~Ll~~g 68 (282)
T 1oy3_D 2 FGYV-TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQND-----------L-GQTALHLAAILGEASTVEKLYAAG 68 (282)
T ss_dssp CCCC-CTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCT-----------T-SCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCcc-CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCC-----------C-CCCHHHHHHHcCCHHHHHHHHHcC
Confidence 4566 999999999999999999999999988763 344555 6 999999999999999999999999
Q ss_pred CC-CCCCCcchhHHHHHHhcCcHHHHHHHHHhCCCccccc------------cCCCCcHhHHHhcCCCCCCCCCCcchhh
Q 006173 177 RE-PLDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARAD------------IGETGKILESLSKRPKAFASGSRLGSWK 243 (658)
Q Consensus 177 ~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~------------d~~g~TpLh~Aa~~~~~~~s~~~l~~~~ 243 (658)
++ ...+..|.||||+|+..|+.++++.|++..+...... ...+.++++.++.....
T Consensus 69 a~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 137 (282)
T 1oy3_D 69 AGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPE----------- 137 (282)
T ss_dssp CCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC----------------------------------------
T ss_pred CCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccc-----------
Confidence 95 6789999999999999999999999999865432110 01112222211111000
Q ss_pred hhhcccccccccCCCCCCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHh
Q 006173 244 RLLYQWIPIQEEYNPHPHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDA 323 (658)
Q Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 323 (658)
T Consensus 138 -------------------------------------------------------------------------------- 137 (282)
T 1oy3_D 138 -------------------------------------------------------------------------------- 137 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhHHHHHHHHHHHHhhhhhhcchhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCH
Q 006173 324 KIIHEQTLEILRIMCAGAVDILNTHEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRRE 403 (658)
Q Consensus 324 ~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~ 403 (658)
............+.+.++..|.||||+|+..|+.+++++|++++ ++.....+..|+||||+|+..|+.
T Consensus 138 -----------~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~g~tpL~~A~~~~~~ 205 (282)
T 1oy3_D 138 -----------NEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAG-ADLNKPEPTCGRTPLHLAVEAQAA 205 (282)
T ss_dssp -----------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTTCCCHHHHHHHTTCH
T ss_pred -----------hhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcCHHHHHHHcCCH
Confidence 00000000111223346788999999999999999999999999 765443334599999999999999
Q ss_pred hHHHHHhcCCCcccccccccccCCCchhhhHhhcCCCCCCChhHHhhHHHHHHHHHHHhhc-CcchhhhccCCCCCchhh
Q 006173 404 KVFNIIFNFPNIYPFFMANIDEKRINILHIAAMSVPSTEVPGAALQMQRELQWFKAVENCV-HPTLQDQLNDKDKTPREV 482 (658)
Q Consensus 404 ~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~v~~~~l~~~~~l~~~~~v~~~~-~~~~~~~~n~~G~Tp~dl 482 (658)
+++++|++.|+ ++|.+|.+|+||||+|++.|+.+.+ +.++ .....+.+|.+|+||++.
T Consensus 206 ~~v~~Ll~~ga----d~~~~d~~g~tpL~~A~~~~~~~~v-----------------~~Ll~~ga~~~~~~~~g~tpl~~ 264 (282)
T 1oy3_D 206 SVLELLLKAGA----DPTARMYGGRTPLGSALLRPNPILA-----------------RLLRAHGAPEPEDGGDKLSPCSS 264 (282)
T ss_dssp HHHHHHHHTTC----CTTCCCTTSCCHHHHHHTSSCHHHH-----------------HHHHHTTCCCCCCC---------
T ss_pred HHHHHHHHcCC----CCcccccCCCCHHHHHHHcCCcHHH-----------------HHHHHcCCCcCcCCCcccccccc
Confidence 99999999998 7899999999999999999984211 1111 122367899999999999
Q ss_pred hHHHHH
Q 006173 483 FTKEHE 488 (658)
Q Consensus 483 ~~~~~~ 488 (658)
+.....
T Consensus 265 a~~~~~ 270 (282)
T 1oy3_D 265 SGSDSD 270 (282)
T ss_dssp ------
T ss_pred cCCccc
Confidence 866543
No 24
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-34 Score=289.77 Aligned_cols=214 Identities=14% Similarity=0.124 Sum_probs=131.1
Q ss_pred CCCCcHHHHhhhcCCChHHHHHHHhcCCc------cccccccCCCCChHHHHHHhcCCH-HHHHHHHhcCCCCCcccccC
Q 006173 68 DQSSIFEFIVGIPDVPATLVDKLLSKVPR------NCLQNFARDEGSEYMEYAVSTGKL-NLITTLMGYNEELPNIKVEK 140 (658)
Q Consensus 68 ~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~------~~l~~~~d~~G~TpLh~Aa~~G~~-~iv~~Ll~~~~~l~~~~~~~ 140 (658)
..+.|||| .||..|+.++|++||+.+.. ..++.. |..|.||||.|+..++. +++++|++.|+++ +..+.
T Consensus 9 ~~~~~~L~-~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~-~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadv-n~~d~- 84 (269)
T 4b93_B 9 YREVEKLL-RAVADGDLEMVRYLLEWTEEDLEDAEDTVSAA-DPEFCHPLCQCPKCAPAQKRLAKVPASGLGV-NVTSQ- 84 (269)
T ss_dssp CHHHHHHH-HHHHTTCHHHHHHHHTCC-----------------------------------------CCCCT-TCCCT-
T ss_pred ccchhHHH-HHHHcCCHHHHHHHHHCCCccccccccccccc-CccCCCHHHHHHHhCCHHHHHHHHHHCCCCC-CCcCC-
Confidence 33455566 66666666666666555321 123445 66677777777766654 3666677666654 33344
Q ss_pred CCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCC
Q 006173 141 KDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGET 219 (658)
Q Consensus 141 ~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g 219 (658)
+ |+||||+||..|+.++|++|++.+++ ...+..|.||+|.|+..++.++++.|++.+.+. +.
T Consensus 85 ----------~-G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n~----- 147 (269)
T 4b93_B 85 ----------D-GSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKP-NK----- 147 (269)
T ss_dssp ----------T-SCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CC-----
T ss_pred ----------C-CCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCC-CC-----
Confidence 5 77777777777777777777777764 456667777777777777777777777653321 11
Q ss_pred CcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhH
Q 006173 220 GKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLR 299 (658)
Q Consensus 220 ~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (658)
T Consensus 148 -------------------------------------------------------------------------------- 147 (269)
T 4b93_B 148 -------------------------------------------------------------------------------- 147 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhhcchhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcC
Q 006173 300 QKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDILNTHEEAQNVFKKPMFKAARLGIYEIVMGIMNSYF 379 (658)
Q Consensus 300 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~ 379 (658)
+|..|+||||+||..|+.+++++|++++
T Consensus 148 ---------------------------------------------------~d~~g~TpL~~A~~~g~~~~v~~Ll~~g- 175 (269)
T 4b93_B 148 ---------------------------------------------------KDLSGNTPLIYACSGGHHELVALLLQHG- 175 (269)
T ss_dssp ---------------------------------------------------CCTTCCCHHHHHHHTTCGGGHHHHHHTT-
T ss_pred ---------------------------------------------------CCCCCCCHHHHHHHCCCHHHHHHHHHCC-
Confidence 2345778888888888888999999888
Q ss_pred CCcccccccCCChHHHHHHHhCCHhHHHHHhcCCCcccccccccccCCCchhhhHhhcCC
Q 006173 380 PWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPNIYPFFMANIDEKRINILHIAAMSVP 439 (658)
Q Consensus 380 ~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~ 439 (658)
.+ ++.+|..|+||||+|+.+|+.++|++|++.|+ ++|.+|.+|+||||+|++.++
T Consensus 176 ad-vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Ga----d~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 176 AS-INASNNKGNTALHEAVIEKHVFVVELLLLHGA----SVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp CC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTC----CSCCCCTTSCCSGGGSCTTCH
T ss_pred CC-CCccccCCCcHHHHHHHcCCHHHHHHHHHCCC----CCCCcCCCCCCHHHHHHhCCc
Confidence 65 56678899999999999999999999999988 778999999999999987653
No 25
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.3e-33 Score=277.16 Aligned_cols=212 Identities=17% Similarity=0.176 Sum_probs=137.9
Q ss_pred CCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcc
Q 006173 69 QSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKD 148 (658)
Q Consensus 69 ~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~ 148 (658)
.+.|||| .|+..|+.+.++.|++. .+..++.. |..|.||||+|+..|+.+++++|++.++++ +..+.
T Consensus 5 ~~~~~l~-~A~~~g~~~~v~~ll~~-~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~--------- 71 (231)
T 3aji_A 5 VSNIMIC-NLAYSGKLDELKERILA-DKSLATRT-DQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDD--------- 71 (231)
T ss_dssp CSSSHHH-HHHHHTCHHHHHHHHHH-CGGGGGCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCT---------
T ss_pred cccchHH-HHHHhCCHHHHHHHHHh-chhhhhcC-CCCCCCHHHHHHHcCcHHHHHHHHHhCCCC-CCcCC---------
Confidence 4566777 77777777777777766 33335556 667777777777777777777777666554 33333
Q ss_pred cCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHh
Q 006173 149 EEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILESLS 227 (658)
Q Consensus 149 ~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa 227 (658)
. |+||||+|+..|+.+++++|++++++ ...+..|.||||+|+..|+.++++.|++++.+. +.
T Consensus 72 --~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~------------- 134 (231)
T 3aji_A 72 --A-GWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP-DA------------- 134 (231)
T ss_dssp --T-SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TC-------------
T ss_pred --C-CCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CC-------------
Confidence 4 77777777777777777777777664 455666777777777777777777766653211 00
Q ss_pred cCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHH
Q 006173 228 KRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLW 307 (658)
Q Consensus 228 ~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (658)
T Consensus 135 -------------------------------------------------------------------------------- 134 (231)
T 3aji_A 135 -------------------------------------------------------------------------------- 134 (231)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhhcchhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccc
Q 006173 308 NNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDILNTHEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKN 387 (658)
Q Consensus 308 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d 387 (658)
++..|.||||+|+..|+.+++++|++.+ .+ ++.+|
T Consensus 135 -------------------------------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~-~~~~~ 169 (231)
T 3aji_A 135 -------------------------------------------KDHYDATAMHRAAAKGNLKMVHILLFYK-AS-TNIQD 169 (231)
T ss_dssp -------------------------------------------CCTTSCCHHHHHHHHTCHHHHHHHHHTT-CC-SCCCC
T ss_pred -------------------------------------------cCCCCCcHHHHHHHcCCHHHHHHHHhcC-CC-ccccC
Confidence 2233567777777777777777777766 43 44556
Q ss_pred cCCChHHHHHHHhCCHhHHHHHhcCCCcccccccccccCCCchhhhHhhcCC
Q 006173 388 KDGYDIFKVAVEHRREKVFNIIFNFPNIYPFFMANIDEKRINILHIAAMSVP 439 (658)
Q Consensus 388 ~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~ 439 (658)
..|+||||+|+..++.+++++|++.|+ +++.+|.+|+||||+|++.++
T Consensus 170 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~t~l~~A~~~~~ 217 (231)
T 3aji_A 170 TEGNTPLHLACDEERVEEAKFLVTQGA----SIYIENKEEKTPLQVAKGGLG 217 (231)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTC----CSCCCCTTSCCHHHHSCHHHH
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHCCC----CCCCCCCCCCCHHHHHHhhHH
Confidence 677777777777777777777777766 556777777777777765544
No 26
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=7.5e-34 Score=278.84 Aligned_cols=223 Identities=14% Similarity=0.057 Sum_probs=194.5
Q ss_pred hhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHH
Q 006173 34 SYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEY 113 (658)
Q Consensus 34 ~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~ 113 (658)
+.+|||.|+..|+.+.++.++ +..+...+ ..+.+|.|||| .|+..|+.++|++|++.+ .+ ++.. |..|.||||+
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll-~~~~~~~~-~~~~~g~t~L~-~A~~~g~~~~v~~Ll~~g-~~-~~~~-~~~g~t~L~~ 79 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERI-LADKSLAT-RTDQDSRTALH-WACSAGHTEIVEFLLQLG-VP-VNDK-DDAGWSPLHI 79 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHH-HHCGGGGG-CCCTTSCCHHH-HHHHHTCHHHHHHHHHTT-CC-SCCC-CTTSCCHHHH
T ss_pred ccchHHHHHHhCCHHHHHHHH-Hhchhhhh-cCCCCCCCHHH-HHHHcCcHHHHHHHHHhC-CC-CCCc-CCCCCCHHHH
Confidence 568999999999999999999 76666554 34889999999 999999999999999994 33 7778 9999999999
Q ss_pred HHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHH
Q 006173 114 AVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFL 192 (658)
Q Consensus 114 Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A 192 (658)
|+..|+.+++++|++.++++ +..+. . |.||||+|+..|+.+++++|++++++ ...+..|.||||+|
T Consensus 80 A~~~~~~~~v~~Ll~~g~~~-~~~~~-----------~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A 146 (231)
T 3aji_A 80 AASAGXDEIVKALLVKGAHV-NAVNQ-----------N-GCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRA 146 (231)
T ss_dssp HHHHTCHHHHHHHHHTTCCT-TCCCT-----------T-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHcCHHHHHHHHHHcCCCC-CCCCC-----------C-CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 99999999999999999886 44454 5 99999999999999999999999985 67889999999999
Q ss_pred HhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCCCCCchh
Q 006173 193 IDSNLFDMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSENVGGDLE 272 (658)
Q Consensus 193 ~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (658)
+..|+.++++.|++.+.+. +.
T Consensus 147 ~~~~~~~~v~~Ll~~g~~~-~~---------------------------------------------------------- 167 (231)
T 3aji_A 147 AAKGNLKMVHILLFYKAST-NI---------------------------------------------------------- 167 (231)
T ss_dssp HHHTCHHHHHHHHHTTCCS-CC----------------------------------------------------------
T ss_pred HHcCCHHHHHHHHhcCCCc-cc----------------------------------------------------------
Confidence 9999999999999864322 11
Q ss_pred hhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhhcchhhhh
Q 006173 273 KQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDILNTHEEAQ 352 (658)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~ 352 (658)
+|
T Consensus 168 ------------------------------------------------------------------------------~~ 169 (231)
T 3aji_A 168 ------------------------------------------------------------------------------QD 169 (231)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred ------------------------------------------------------------------------------cC
Confidence 33
Q ss_pred cCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhcCCC
Q 006173 353 NVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPN 414 (658)
Q Consensus 353 ~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~ 414 (658)
..|.||||+|+..|+.+++++|++++ .+ ++.+|..|+||||+|+..++.+++++|.+.++
T Consensus 170 ~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~-~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a 229 (231)
T 3aji_A 170 TEGNTPLHLACDEERVEEAKFLVTQG-AS-IYIENKEEKTPLQVAKGGLGLILKRLAEGEEA 229 (231)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTT-CC-SCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHCC-CC-CCCCCCCCCCHHHHHHhhHHHHHHHHHccccc
Confidence 45889999999999999999999998 65 46789999999999999999999999988754
No 27
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.7e-34 Score=302.41 Aligned_cols=215 Identities=16% Similarity=0.125 Sum_probs=182.2
Q ss_pred cccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCC
Q 006173 65 IIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDP 144 (658)
Q Consensus 65 ~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~ 144 (658)
..|.+|.|||| .||..|+.++|++|++.+ .+ ++.. |..|.||||+||..|+.++|++|++.+++.. ..
T Consensus 15 ~~d~~g~t~L~-~Aa~~g~~~~v~~Ll~~g-~~-~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---~~----- 82 (364)
T 3ljn_A 15 KSDDENMEKIH-VAARKGQTDEVRRLIETG-VS-PTIQ-NRFGCTALHLACKFGCVDTAKYLASVGEVHS---LW----- 82 (364)
T ss_dssp -CCHHHHHHHH-HHHHHTCHHHHHHHHHTT-CC-TTCC-CTTCCCHHHHHHHHCCHHHHHHHHHHCCCCC---CB-----
T ss_pred ccCCCCCCHHH-HHHHcCCHHHHHHHHHcC-CC-cccc-CCCCCcHHHHHHHcCCHHHHHHHHHCCCCcc---cc-----
Confidence 34778999999 999999999999999994 33 7888 9999999999999999999999999998542 23
Q ss_pred CCcccCCCCCcHHHHHHHhCcHHHHHHhccC----CCC-CC-----------------CCCcchhHHHHHHhcC--cHHH
Q 006173 145 NIKDEEKDDLLPVHMAAKAGKRDAVRHLLPK----TRE-PL-----------------DGRQGFVLLKFLIDSN--LFDM 200 (658)
Q Consensus 145 ~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~----~~~-~~-----------------~~~~g~t~Lh~A~~~g--~~~i 200 (658)
. |.||||+|+..|+.++|++|+++ +.+ .. .+..|.||||+|+..| +.++
T Consensus 83 ------~-g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~ 155 (364)
T 3ljn_A 83 ------H-GQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEM 155 (364)
T ss_dssp ------T-TBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHH
T ss_pred ------C-CCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHH
Confidence 4 99999999999999999999998 442 11 5666777777777777 7777
Q ss_pred HHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCCCCCchhhhhhhhHH
Q 006173 201 ALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSENVGGDLEKQLSVTSK 280 (658)
Q Consensus 201 v~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (658)
+++|++.+.+.
T Consensus 156 v~~Ll~~ga~~--------------------------------------------------------------------- 166 (364)
T 3ljn_A 156 IKILVQLGASP--------------------------------------------------------------------- 166 (364)
T ss_dssp HHHHHHHTCCT---------------------------------------------------------------------
T ss_pred HHHHHHcCCCC---------------------------------------------------------------------
Confidence 77777663221
Q ss_pred HHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhhcchhhhhcCCCcHHH
Q 006173 281 IQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDILNTHEEAQNVFKKPMF 360 (658)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~g~tpLh 360 (658)
+.+|..|.||||
T Consensus 167 --------------------------------------------------------------------~~~d~~g~t~L~ 178 (364)
T 3ljn_A 167 --------------------------------------------------------------------TAKDKADETPLM 178 (364)
T ss_dssp --------------------------------------------------------------------TCCCTTSCCHHH
T ss_pred --------------------------------------------------------------------cccCCCCCCHHH
Confidence 124456889999
Q ss_pred HHHHhCcHHHHHHHHhhcCCCc----ccccccCCChHHHHHHHhCCHhHHHHHhcCCCcccccccccccCCCchhhhHhh
Q 006173 361 KAARLGIYEIVMGIMNSYFPWS----LEFKNKDGYDIFKVAVEHRREKVFNIIFNFPNIYPFFMANIDEKRINILHIAAM 436 (658)
Q Consensus 361 ~Aa~~G~~~~v~~Ll~~~~~~~----~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~ 436 (658)
+|+..|+.+++++|++++ ++. ++.+|..|+||||+|+..|+.+++++|++.|+ ++|.+|.+|+||||+|++
T Consensus 179 ~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga----d~~~~d~~g~tpL~~A~~ 253 (364)
T 3ljn_A 179 RAMEFRNREALDLMMDTV-PSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGI----DVNMEDNEHTVPLYLSVR 253 (364)
T ss_dssp HHHHTTCHHHHHHHHHHC-SCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTC----CTTCCCTTSCCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHhcc-cccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC----CCCCCCCCCCCHHHHHHH
Confidence 999999999999999998 663 67789999999999999999999999999998 789999999999999999
Q ss_pred cCCC
Q 006173 437 SVPS 440 (658)
Q Consensus 437 ~g~~ 440 (658)
.|+.
T Consensus 254 ~g~~ 257 (364)
T 3ljn_A 254 AAMV 257 (364)
T ss_dssp TCCH
T ss_pred hChH
Confidence 9985
No 28
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.9e-34 Score=287.37 Aligned_cols=227 Identities=16% Similarity=0.155 Sum_probs=163.6
Q ss_pred hhhhhhhhhhHHHHHHHHhCCHHHHHHHHhhcCcccc------cccccCCCCcHHHHhhhcCCCh-HHHHHHHhcCCccc
Q 006173 26 EKIIKDIDSYKQVTRYILENDWKGLEDYIMSKTPNAL------TCIIVDQSSIFEFIVGIPDVPA-TLVDKLLSKVPRNC 98 (658)
Q Consensus 26 ~~~~~~~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~------~~~~~~~g~T~Lh~~Aa~~g~~-~iv~~Ll~~~~~~~ 98 (658)
++..+|+.+.+||+.||..|+.+.|+.|| +...... ....+..|.|||| .|+..++. .+++.|++.| .+
T Consensus 3 ee~kkd~~~~~~L~~A~~~G~~~~v~~LL-~~~~~~~~~~~~~~~~~~~~~~t~L~-~a~~~~~~~~~v~~Ll~~G-ad- 78 (269)
T 4b93_B 3 EETKKDYREVEKLLRAVADGDLEMVRYLL-EWTEEDLEDAEDTVSAADPEFCHPLC-QCPKCAPAQKRLAKVPASG-LG- 78 (269)
T ss_dssp ----CCCHHHHHHHHHHHTTCHHHHHHHH-TCC-----------------------------------------CC-CC-
T ss_pred cccccCccchhHHHHHHHcCCHHHHHHHH-HCCCcccccccccccccCccCCCHHH-HHHHhCCHHHHHHHHHHCC-CC-
Confidence 44566788899999999999999999999 5433221 1123677899999 99988775 5889999884 33
Q ss_pred cccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC
Q 006173 99 LQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE 178 (658)
Q Consensus 99 l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~ 178 (658)
++.+ |.+|+||||+||..|+.++|++|++.++++ ...+. . |.||+|+|+..++.+++++|++++++
T Consensus 79 vn~~-d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~~-----------~-g~t~l~~a~~~~~~~~~~~Ll~~g~~ 144 (269)
T 4b93_B 79 VNVT-SQDGSSPLHVAALHGRADLIPLLLKHGANA-GARNA-----------D-QAVPLHLACQQGHFQVVKCLLDSNAK 144 (269)
T ss_dssp TTCC-CTTSCCHHHHHHHTTCTTHHHHHHHTTCCT-TCCCT-----------T-CCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred CCCc-CCCCCCHHHHHHHcCcHHHHHHHHhcCCCc-CccCC-----------C-CCCccccccccChHHHHHHHHHCCCC
Confidence 7888 999999999999999999999999999886 44444 5 99999999999999999999999985
Q ss_pred -CCCCCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCC
Q 006173 179 -PLDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYN 257 (658)
Q Consensus 179 -~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~ 257 (658)
+.+|..|.||||+|+..|+.+++++|++.+.++ +.
T Consensus 145 ~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadv-n~------------------------------------------- 180 (269)
T 4b93_B 145 PNKKDLSGNTPLIYACSGGHHELVALLLQHGASI-NA------------------------------------------- 180 (269)
T ss_dssp SCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCT-TC-------------------------------------------
T ss_pred CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC-Cc-------------------------------------------
Confidence 678999999999999999999999999874332 11
Q ss_pred CCCCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHH
Q 006173 258 PHPHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIM 337 (658)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l 337 (658)
T Consensus 181 -------------------------------------------------------------------------------- 180 (269)
T 4b93_B 181 -------------------------------------------------------------------------------- 180 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhhhhcchhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhc
Q 006173 338 CAGAVDILNTHEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFN 411 (658)
Q Consensus 338 ~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~ 411 (658)
++..|.||||+|+..|+.++|++|++++ .+ ++.+|.+|+||||+|+++++ ++++|..
T Consensus 181 -------------~~~~g~t~Lh~A~~~g~~~~v~~Ll~~G-ad-~~~~d~~G~TpL~~A~~~~~--i~~lL~~ 237 (269)
T 4b93_B 181 -------------SNNKGNTALHEAVIEKHVFVVELLLLHG-AS-VQVLNKRQRTAVDCAEQNSK--IMELLQV 237 (269)
T ss_dssp -------------BCTTSCBHHHHHHHTTCHHHHHHHHHTT-CC-SCCCCTTSCCSGGGSCTTCH--HHHHTTC
T ss_pred -------------cccCCCcHHHHHHHcCCHHHHHHHHHCC-CC-CCCcCCCCCCHHHHHHhCCc--HHHHHHH
Confidence 3445889999999999999999999999 65 57789999999999988775 5554433
No 29
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1e-33 Score=279.55 Aligned_cols=228 Identities=13% Similarity=0.118 Sum_probs=189.4
Q ss_pred hhhhhhHHHHHHHHhCCHHHHHHHHhh---cCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCC
Q 006173 30 KDIDSYKQVTRYILENDWKGLEDYIMS---KTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDE 106 (658)
Q Consensus 30 ~~~~~~~~L~~A~~~G~~~~v~~ll~~---~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~ 106 (658)
.+.++++|||.||..|+.+.++.++ + ..+..++.+ +..|.|||| .|+..|+.+++++|++.+ .+ ++.. |..
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll-~~~~~~~~~~~~~-~~~g~t~L~-~A~~~~~~~~v~~Ll~~g-~~-~~~~-~~~ 78 (241)
T 1k1a_A 5 ADEDGDTPLHIAVVQGNLPAVHRLV-NLFQQGGRELDIY-NNLRQTPLH-LAVITTLPSVVRLLVTAG-AS-PMAL-DRH 78 (241)
T ss_dssp --CTTCCHHHHHHHTTCHHHHHHHH-HHHHHTTCCSCCC-CTTSCCHHH-HHHHTTCHHHHHHHHHTT-CC-TTCC-CTT
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHH-HHHHhcCCCCCcc-cccCCCHHH-HHHHcCCHHHHHHHHHcC-CC-cccc-CCC
Confidence 4567889999999999999999998 5 244555544 788999999 999999999999999984 33 6777 999
Q ss_pred CChHHHHHHhcCCHHHHHHHHhcCCC---CCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCC
Q 006173 107 GSEYMEYAVSTGKLNLITTLMGYNEE---LPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDG 182 (658)
Q Consensus 107 G~TpLh~Aa~~G~~~iv~~Ll~~~~~---l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~ 182 (658)
|.||||+|+..|+.+++++|++.++. .....+. . |.||||+|+..|+.+++++|++++++ ...+
T Consensus 79 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~-----------~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~ 146 (241)
T 1k1a_A 79 GQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNY-----------D-GLTALHVAVNTECQETVQLLLERGADIDAVD 146 (241)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCT-----------T-SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCc-----------C-CCcHHHHHHHcCCHHHHHHHHHcCCCccccc
Confidence 99999999999999999999999873 1233333 6 99999999999999999999999985 4455
Q ss_pred -CcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCC
Q 006173 183 -RQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPH 261 (658)
Q Consensus 183 -~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~ 261 (658)
..|.||||+|+..|+.++++.|++.+.+. +
T Consensus 147 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~------------------------------------------------ 177 (241)
T 1k1a_A 147 IKSGRSPLIHAVENNSLSMVQLLLQHGANV-N------------------------------------------------ 177 (241)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-T------------------------------------------------
T ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHcCCCC-C------------------------------------------------
Confidence 78999999999999999999999874322 1
Q ss_pred CCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhh
Q 006173 262 PPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGA 341 (658)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 341 (658)
T Consensus 178 -------------------------------------------------------------------------------- 177 (241)
T 1k1a_A 178 -------------------------------------------------------------------------------- 177 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhcchhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhcCCC
Q 006173 342 VDILNTHEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPN 414 (658)
Q Consensus 342 ~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~ 414 (658)
.+|..|.||||+|+..|+.+++++|++++ .+ ++.+|..|+||||+|+..|+.++++.|.+.++
T Consensus 178 --------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~-~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 178 --------AQMYSGSSALHSASGRGLLPLVRTLVRSG-AD-SSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240 (241)
T ss_dssp --------CBCTTSCBHHHHHHHHTCHHHHHHHHHTT-CC-TTCCCTTSCCTTTTCSSHHHHHHHTC------
T ss_pred --------CcCCCCCCHHHHHHHcCCHHHHHHHHhcC-CC-CCCcCCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence 13445889999999999999999999998 65 56789999999999999999999999988754
No 30
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=7.2e-33 Score=271.13 Aligned_cols=221 Identities=15% Similarity=0.154 Sum_probs=185.5
Q ss_pred hhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCcccccc-ccCCCCChHHH
Q 006173 34 SYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQN-FARDEGSEYME 112 (658)
Q Consensus 34 ~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~-~~d~~G~TpLh 112 (658)
+.+|||.||..|+.+.++.++ +..+.... ..+.+|+|||| .|+..|+.+++++|++.+....++. . |..|.||||
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll-~~~~~~~~-~~~~~g~t~L~-~A~~~~~~~~v~~Ll~~~~~~~~~~~~-~~~g~t~L~ 77 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELL-HSKPSLLL-QKDQDGRIPLH-WSVSFQAHEITSFLLSKMENVNLDDYP-DDSGWTPFH 77 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHH-HHCGGGTT-CCCTTSCCHHH-HHHHTTCHHHHHHHHHTCTTCCGGGCC-CTTSCCHHH
T ss_pred CccHHHHHHHhCCHHHHHHHH-hcCccccc-cCCCCCCCHHH-HHHHcCCHHHHHHHHhccccccccccC-CCCCCCHHH
Confidence 358999999999999999999 66655443 34889999999 9999999999999999964333555 6 899999999
Q ss_pred HHHhcCCHHHHHHHHhcC--CCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHH
Q 006173 113 YAVSTGKLNLITTLMGYN--EELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLL 189 (658)
Q Consensus 113 ~Aa~~G~~~iv~~Ll~~~--~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~L 189 (658)
+|+..|+.+++++|++.+ +++ +..+. . |.||||+|+..|+.+++++|++++++ ..+|..|.|||
T Consensus 78 ~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~-----------~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L 144 (228)
T 2dzn_A 78 IACSVGNLEVVKSLYDRPLKPDL-NKITN-----------Q-GVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPL 144 (228)
T ss_dssp HHHHHCCHHHHHHHHSSSSCCCT-TCCCT-----------T-CCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHH
T ss_pred HHHHcCCHHHHHHHHhCCCCccc-ccCCc-----------C-CCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHH
Confidence 999999999999999998 554 44444 6 99999999999999999999999985 67899999999
Q ss_pred HHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCCCCC
Q 006173 190 KFLIDSNLFDMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSENVGG 269 (658)
Q Consensus 190 h~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 269 (658)
|+|+..|+.++++.|++.++...+.
T Consensus 145 ~~A~~~~~~~~v~~Ll~~g~~~~~~------------------------------------------------------- 169 (228)
T 2dzn_A 145 HRAASVGSLKLIELLCGLGKSAVNW------------------------------------------------------- 169 (228)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCCSCC-------------------------------------------------------
T ss_pred HHHHHcCCHHHHHHHHhcCcccccC-------------------------------------------------------
Confidence 9999999999999999875332211
Q ss_pred chhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhhcchh
Q 006173 270 DLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDILNTHE 349 (658)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~ 349 (658)
T Consensus 170 -------------------------------------------------------------------------------- 169 (228)
T 2dzn_A 170 -------------------------------------------------------------------------------- 169 (228)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcCCCcHHHHHHHhCcHHHHHHHH-hhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhcC
Q 006173 350 EAQNVFKKPMFKAARLGIYEIVMGIM-NSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNF 412 (658)
Q Consensus 350 ~~~~~g~tpLh~Aa~~G~~~~v~~Ll-~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~ 412 (658)
+|..|+||||+|+..|+.+++++|+ +.+ . .++.+|.+|+||||+|+.. +++++|+++
T Consensus 170 -~d~~g~t~L~~A~~~~~~~~v~~Ll~~~g-a-~~~~~~~~g~t~l~~A~~~---~~~~~l~~~ 227 (228)
T 2dzn_A 170 -QDKQGWTPLFHALAEGHGDAAVLLVEKYG-A-EYDLVDNKGAKAEDVALNE---QVKKFFLNN 227 (228)
T ss_dssp -CCTTSCCHHHHHHHTTCHHHHHHHHHHHC-C-CSCCBCTTSCBGGGGCSST---THHHHHHTT
T ss_pred -cCCCCCCHHHHHHHcCCHHHHHHHHHhcC-C-CCCccCCCCCcHHHHHHHH---HHHHHHHhc
Confidence 3445889999999999999999999 666 4 4677899999999999654 567777654
No 31
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=8.5e-33 Score=272.42 Aligned_cols=225 Identities=15% Similarity=0.113 Sum_probs=191.3
Q ss_pred hhhhhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCC
Q 006173 29 IKDIDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGS 108 (658)
Q Consensus 29 ~~~~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~ 108 (658)
..+..+.+|||.||..|+.+.++.++ +. +..++.. +.+|.|||| .|+..|+.++|++|++.+ .+ ++.. |..|.
T Consensus 6 ~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~-g~~~~~~-~~~g~t~L~-~A~~~~~~~~v~~Ll~~g-~~-~~~~-~~~g~ 78 (237)
T 3b7b_A 6 MEHQNKRSPLHAAAEAGHVDICHMLV-QA-GANIDTC-SEDQRTPLM-EAAENNHLEAVKYLIKAG-AL-VDPK-DAEGS 78 (237)
T ss_dssp CSSCCSCCHHHHHHHHTCHHHHHHHH-HT-TCCTTCC-CTTCCCHHH-HHHHTTCHHHHHHHHTTT-CC-CCCC-CTTSC
T ss_pred cccCCCCCHHHHHHHcCcHHHHHHHH-Hc-CCCcCcc-CCCCCCHHH-HHHHhCCHHHHHHHHhCC-CC-CCCC-CCCCC
Confidence 34556889999999999999999999 44 4445444 788999999 999999999999999984 33 6777 99999
Q ss_pred hHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchh
Q 006173 109 EYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFV 187 (658)
Q Consensus 109 TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t 187 (658)
||||+|+..|+.+++++|++.++...+..+. . |.||||+|+..|+.+++++|++++++ ...+..|.|
T Consensus 79 t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-----------~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 146 (237)
T 3b7b_A 79 TCLHLAAKKGHYEVVQYLLSNGQMDVNCQDD-----------G-GWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENI 146 (237)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCCTTCCCT-----------T-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCcccCCC-----------C-CCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCC
Confidence 9999999999999999999998544455665 6 99999999999999999999999985 678899999
Q ss_pred HHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCCC
Q 006173 188 LLKFLIDSNLFDMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSENV 267 (658)
Q Consensus 188 ~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 267 (658)
|||+|+..|+.++++.|++.+.+. +.
T Consensus 147 ~L~~A~~~~~~~~~~~Ll~~g~~~-~~----------------------------------------------------- 172 (237)
T 3b7b_A 147 CLHWAAFSGCVDIAEILLAAKCDL-HA----------------------------------------------------- 172 (237)
T ss_dssp HHHHHHHHCCHHHHHHHHTTTCCT-TC-----------------------------------------------------
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCC-CC-----------------------------------------------------
Confidence 999999999999999999874322 11
Q ss_pred CCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhhcc
Q 006173 268 GGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDILNT 347 (658)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 347 (658)
T Consensus 173 -------------------------------------------------------------------------------- 172 (237)
T 3b7b_A 173 -------------------------------------------------------------------------------- 172 (237)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhc
Q 006173 348 HEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFN 411 (658)
Q Consensus 348 ~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~ 411 (658)
+|..|.||||+|+..|+.+++++|++++ .+ ++.+|.+|+||||+|+.+++.+.+..+++
T Consensus 173 ---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-ad-~~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 173 ---VNIHGDSPLHIAARENRYDCVVLFLSRD-SD-VTLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp ---CCTTCCCHHHHHHHTTCHHHHHHHHTTT-CC-TTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred ---cCCCCCCHHHHHHHhCCHhHHHHHHHcC-CC-CCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2345789999999999999999999998 65 56679999999999999999876665554
No 32
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=5.3e-32 Score=266.77 Aligned_cols=228 Identities=11% Similarity=0.072 Sum_probs=188.7
Q ss_pred ccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCC
Q 006173 66 IVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPN 145 (658)
Q Consensus 66 ~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~ 145 (658)
+|..|.|||| .|+..|+.+++++|++.+ .+ ++.. |..|.||||+|+..|+.+++++|++.+++.....+.
T Consensus 5 ~d~~~~~~l~-~A~~~g~~~~~~~Ll~~g-~~-~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~------ 74 (240)
T 3eu9_A 5 IDDYSTWDIV-KATQYGIYERCRELVEAG-YD-VRQP-DKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGD------ 74 (240)
T ss_dssp CSCGGGCCHH-HHHHTTCHHHHHHHHHTT-CC-TTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTT------
T ss_pred cccccchHHH-HHHHcCChHHHHHHHHcC-CC-cCCC-CCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCC------
Confidence 3778899999 999999999999999984 33 7777 899999999999999999999999999887666666
Q ss_pred CcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhH
Q 006173 146 IKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILE 224 (658)
Q Consensus 146 ~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh 224 (658)
. |.||||+|+..|+.+++++|++++++ ...+..|.||||+|+..|+.++++.|++++.+ .+.+|.+|.||||
T Consensus 75 -----~-~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~-~~~~~~~g~t~l~ 147 (240)
T 3eu9_A 75 -----L-NSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQD-VDMMDQNGMTPLM 147 (240)
T ss_dssp -----T-TBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHH
T ss_pred -----c-CCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCC-ccccCCCCCcHHH
Confidence 6 99999999999999999999999885 56788999999999999999999999998554 5778889999999
Q ss_pred HHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHH
Q 006173 225 SLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKF 304 (658)
Q Consensus 225 ~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (658)
+|+.++.. ..+.+
T Consensus 148 ~a~~~~~~------~~~~~------------------------------------------------------------- 160 (240)
T 3eu9_A 148 WAAYRTHS------VDPTR------------------------------------------------------------- 160 (240)
T ss_dssp HHHHHCCS------STTHH-------------------------------------------------------------
T ss_pred HHHHhCCh------HHHHH-------------------------------------------------------------
Confidence 99966432 00111
Q ss_pred HHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhhcchhhhhc-CCCcHHHHHHHhCcHHHHHHHHhhcCCCcc
Q 006173 305 VLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDILNTHEEAQN-VFKKPMFKAARLGIYEIVMGIMNSYFPWSL 383 (658)
Q Consensus 305 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~-~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~ 383 (658)
.+. ....+.+..+. .|.||||+|+..|+.+++++|++++ .+ +
T Consensus 161 -------------------------------~L~----~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~-~ 203 (240)
T 3eu9_A 161 -------------------------------LLL----TFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAG-AN-V 203 (240)
T ss_dssp -------------------------------HHH----HTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHT-CC-T
T ss_pred -------------------------------HHH----hcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcC-CC-C
Confidence 111 11122222343 7899999999999999999999998 66 5
Q ss_pred cccccCCChHHHHHHHhCCHhHHHHHhcCCC
Q 006173 384 EFKNKDGYDIFKVAVEHRREKVFNIIFNFPN 414 (658)
Q Consensus 384 ~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~ 414 (658)
+.+|..|+||||+|+..|+.+++++|++.++
T Consensus 204 ~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~ 234 (240)
T 3eu9_A 204 DAQNIKGESALDLAKQRKNVWMINHLQEARQ 234 (240)
T ss_dssp TCBCTTSCBHHHHHHHTTCHHHHHHHHHHC-
T ss_pred CCcCCCCCCHHHHHHHcCcHHHHHHHHHhhh
Confidence 6779999999999999999999999999976
No 33
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.98 E-value=4.6e-32 Score=264.53 Aligned_cols=214 Identities=15% Similarity=0.160 Sum_probs=174.9
Q ss_pred CCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHH
Q 006173 45 NDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLIT 124 (658)
Q Consensus 45 G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~ 124 (658)
|+.+.++.++ + .+..++...+.+|+|||| .||..|+.++|++|++.+ .+ ++.. |..|.||||+|+..|+.++++
T Consensus 2 g~~~~i~~Ll-~-~g~~~~~~~d~~g~t~L~-~A~~~g~~~~v~~Ll~~g-~~-~~~~-~~~g~t~L~~A~~~~~~~~v~ 75 (223)
T 2f8y_A 2 DAPAVISDFI-Y-QGASLHNQTDRTGETALH-LAARYSRSDAAKRLLEAS-AD-ANIQ-DNMGRTPLHAAVSADAQGVFQ 75 (223)
T ss_dssp ---CCEETTE-E-TTCCTTCCCTTTCCCHHH-HHHHTTCHHHHHHHHHTT-CC-TTCC-CTTSCCHHHHHHHTTCHHHHH
T ss_pred CcHHHHHHHH-H-cCCCcccccCCCCCchHH-HHHHcCCHHHHHHHHHcC-CC-CCCc-CCCCCCHHHHHHHcCCHHHHH
Confidence 5666777777 3 344454555788999999 999999999999999884 33 6677 889999999999999999999
Q ss_pred HHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHHHhcCcHHHHHH
Q 006173 125 TLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNLFDMALA 203 (658)
Q Consensus 125 ~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~ 203 (658)
+|++.++......+. . |.||||+|+..|+.+++++|++++++ ...|..|.||||+|+..|+.+++++
T Consensus 76 ~Ll~~~~~~~~~~~~-----------~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 143 (223)
T 2f8y_A 76 ILIRNRATDLDARMH-----------D-GTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVV 143 (223)
T ss_dssp HHHHBTTSCTTCCCT-----------T-CCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHH
T ss_pred HHHHcCCCCcccCCC-----------C-CCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHH
Confidence 999988755566666 6 99999999999999999999998885 5678889999999999999999999
Q ss_pred HHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCCCCCchhhhhhhhHHHHH
Q 006173 204 LLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSENVGGDLEKQLSVTSKIQL 283 (658)
Q Consensus 204 LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (658)
|++++.+. +
T Consensus 144 Ll~~g~~~-~---------------------------------------------------------------------- 152 (223)
T 2f8y_A 144 LLKNGANK-D---------------------------------------------------------------------- 152 (223)
T ss_dssp HHHTTCCT-T----------------------------------------------------------------------
T ss_pred HHHcCCCC-C----------------------------------------------------------------------
Confidence 88864322 1
Q ss_pred HHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhhcchhhhhcCCCcHHHHHH
Q 006173 284 KKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDILNTHEEAQNVFKKPMFKAA 363 (658)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~g~tpLh~Aa 363 (658)
.+|..|.||||+|+
T Consensus 153 ------------------------------------------------------------------~~~~~g~t~L~~A~ 166 (223)
T 2f8y_A 153 ------------------------------------------------------------------MQNNREETPLFLAA 166 (223)
T ss_dssp ------------------------------------------------------------------CCCTTCCCHHHHHH
T ss_pred ------------------------------------------------------------------CcCCCCcCHHHHHH
Confidence 13445889999999
Q ss_pred HhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhcCCCc
Q 006173 364 RLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPNI 415 (658)
Q Consensus 364 ~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~ 415 (658)
..|+.+++++|++++ .+ ++.+|..|+||||+|+..++.+++++|++.|+.
T Consensus 167 ~~~~~~~v~~Ll~~g-a~-~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 167 REGSYETAKVLLDHF-AN-RDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp HHTCHHHHHHHHHTT-CC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred HcCCHHHHHHHHHcC-CC-CccccccCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence 999999999999998 65 566799999999999999999999999999873
No 34
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.98 E-value=5e-32 Score=274.85 Aligned_cols=225 Identities=12% Similarity=0.078 Sum_probs=178.2
Q ss_pred HHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCH
Q 006173 41 YILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKL 120 (658)
Q Consensus 41 A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~ 120 (658)
++...+.+.++.+| ... .++.+ |.+|+|||| .|+..|+.++|++|++.+ .+ ++.. +|.||||+||..|+.
T Consensus 6 ~i~~~~~~~v~~lL-~~~--~~~~~-d~~g~t~L~-~A~~~g~~~~v~~Ll~~g-~~-~~~~---~g~t~L~~A~~~g~~ 75 (285)
T 3kea_A 6 RINTWKSKQLKSFL-SSK--DTFKA-DVHGHSASY-YAIADNNVRLVCTLLNAG-AL-KNLL---ENEFPLHQAATLEDT 75 (285)
T ss_dssp TGGGCCHHHHHHHH-HST--TTTCC-CTTSCCHHH-HHHHTTCHHHHHHHHHTT-GG-GSCC---TTCCHHHHHTTSSSC
T ss_pred HHHhcCHHHHHHHH-HhC--CCCcc-CCCCCCHHH-HHHHcCCHHHHHHHHhCC-CC-CCCC---CCCCHHHHHHHcCCH
Confidence 35677888888888 333 24434 889999999 999999999999999994 33 4444 489999999999999
Q ss_pred HHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcc-hhHHHHHHhcCcH
Q 006173 121 NLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQG-FVLLKFLIDSNLF 198 (658)
Q Consensus 121 ~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g-~t~Lh~A~~~g~~ 198 (658)
+++++|++.++++ +..+. . |+||||+|+..|+.+++++|++++++ ...+..| .||||+|+..|+.
T Consensus 76 ~~v~~Ll~~ga~~-~~~d~-----------~-g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~ 142 (285)
T 3kea_A 76 KIVKILLFSGLDD-SQFDD-----------K-GNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDV 142 (285)
T ss_dssp HHHHHHHHTTCCT-TCCCT-----------T-SCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCH
T ss_pred HHHHHHHHCCCCC-CCcCC-----------C-CCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCH
Confidence 9999999998885 44455 6 99999999999999999999999885 5678888 7999999999999
Q ss_pred HHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCCCCCchhhhhhhh
Q 006173 199 DMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSENVGGDLEKQLSVT 278 (658)
Q Consensus 199 ~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (658)
+++++|+++++... +.
T Consensus 143 ~~v~~Ll~~g~~~~---~~------------------------------------------------------------- 158 (285)
T 3kea_A 143 SIVSYFLSEIPSTF---DL------------------------------------------------------------- 158 (285)
T ss_dssp HHHHHHHTTSCTTC---CC-------------------------------------------------------------
T ss_pred HHHHHHHhCCCccc---cc-------------------------------------------------------------
Confidence 99999998754321 00
Q ss_pred HHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhhcchhhhhcCCCcH
Q 006173 279 SKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDILNTHEEAQNVFKKP 358 (658)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~g~tp 358 (658)
..|.||
T Consensus 159 --------------------------------------------------------------------------~~g~t~ 164 (285)
T 3kea_A 159 --------------------------------------------------------------------------AILLSC 164 (285)
T ss_dssp --------------------------------------------------------------------------STHHHH
T ss_pred --------------------------------------------------------------------------cCCccH
Confidence 135588
Q ss_pred HHHHHHhCcHHHHHHHHhhcCCCcccccccCCChH-HHHHHHhCCHhHHHHHhcCCCcccccccccccCCCchhhhHhhc
Q 006173 359 MFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDI-FKVAVEHRREKVFNIIFNFPNIYPFFMANIDEKRINILHIAAMS 437 (658)
Q Consensus 359 Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~-Lh~A~~~~~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~ 437 (658)
||+|+..|+.+++++|++++ .+ ++.+|..|+|| ||+|+.+++.+++++|++.|+ +++.+| |.|+..
T Consensus 165 L~~A~~~g~~~~v~~Ll~~g-ad-~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~ga----d~~~~~-------~~a~~~ 231 (285)
T 3kea_A 165 IHITIKNGHVDMMILLLDYM-TS-TNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDI----NIYSAN-------LENVLL 231 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHHH-HH-TCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCB----CSTTTT-------GGGGTT
T ss_pred HHHHHHcChHHHHHHHHHcC-CC-CCcccCCCCChHHHHHHHcCCHHHHHHHHHcCC----CCCCCC-------hhhhhc
Confidence 88888888888888888887 54 55677888887 888888888888888888877 566666 355555
Q ss_pred CC
Q 006173 438 VP 439 (658)
Q Consensus 438 g~ 439 (658)
|+
T Consensus 232 ~~ 233 (285)
T 3kea_A 232 DD 233 (285)
T ss_dssp TC
T ss_pred CC
Confidence 55
No 35
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.98 E-value=2e-33 Score=290.98 Aligned_cols=281 Identities=11% Similarity=0.058 Sum_probs=189.2
Q ss_pred hCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCc-cc--c-cc-------ccCCCC---Ch
Q 006173 44 ENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPR-NC--L-QN-------FARDEG---SE 109 (658)
Q Consensus 44 ~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~-~~--l-~~-------~~d~~G---~T 109 (658)
....+.++.++ ..+..++.. +..|.|++| |+.++|+.|++++.. +. + .. +....+ .+
T Consensus 29 ~~~~dlv~~ll--~~ga~i~~~-~~~g~~~~~------g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 99 (327)
T 1sw6_A 29 TFTHDLTSDFL--SSPLKIMKA-LPSPVVNDN------EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQ 99 (327)
T ss_dssp ECCTTCCCSTT--TSSCCCEEC-BCCCCCCCH------HHHHHHHHHHHHHHC---------------------------
T ss_pred hhcCchHHHHh--hCCcccccC-CCCCCcccC------chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccc
Confidence 44555677777 556667655 788999988 999999999988521 10 0 00 001122 23
Q ss_pred HHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhH
Q 006173 110 YMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVL 188 (658)
Q Consensus 110 pLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~ 188 (658)
.+|+|+..+..+++++|++.+.++....+. . |+||||+||..|+.++|++|++++++ +.+|..|.||
T Consensus 100 ~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~-----------~-g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~Tp 167 (327)
T 1sw6_A 100 QQHVSFDSLLQEVNDAFPNTQLNLNIPVDE-----------H-GNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESC 167 (327)
T ss_dssp ----CHHHHHHHHHHHCTTSCCCSCSCCST-----------T-CCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCH
T ss_pred hhHHHHHhhHHHHHHHHHhcCCCcccccCC-----------C-CCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 468889889999999999998886443555 6 99999999999999999999999995 6889999999
Q ss_pred HHHHHhcCc---HHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCC
Q 006173 189 LKFLIDSNL---FDMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSE 265 (658)
Q Consensus 189 Lh~A~~~g~---~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~ 265 (658)
||+|+..|+ .++++.|++......+.+|.+|.||||+|++.... .....+++.++...
T Consensus 168 Lh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~---~g~~~~v~~Ll~~~---------------- 228 (327)
T 1sw6_A 168 LVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGM---TGCSAAAKYYLDIL---------------- 228 (327)
T ss_dssp HHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTS---TTCHHHHHHHHHHH----------------
T ss_pred HHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccc---cccHHHHHHHHHHH----------------
Confidence 999999998 78888888887666788999999999999983110 00111111111000
Q ss_pred CCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhh
Q 006173 266 NVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDIL 345 (658)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ 345 (658)
..++.... .. ...+ ......
T Consensus 229 -------------------~~~~~~~~---------------------~~--------~i~~------------~~~~~g 248 (327)
T 1sw6_A 229 -------------------MGWIVKKQ---------------------NR--------PIQS------------GTNEKE 248 (327)
T ss_dssp -------------------HHHHHHGG---------------------GC--------CEEE------------C-----
T ss_pred -------------------HHHHhccc---------------------ch--------HHHh------------hhhccc
Confidence 00000000 00 0000 000112
Q ss_pred cchhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhcCCCccccccccccc
Q 006173 346 NTHEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPNIYPFFMANIDE 425 (658)
Q Consensus 346 ~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~in~~D~ 425 (658)
.+.+.++..|.||||.|+. +++|+++. ++.+|..|+||||+|+.+|+.+++++|++.|+ +++.+|.
T Consensus 249 ~~~~~~~~~g~t~L~~a~~------~~~Ll~~~----~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Ga----d~~~~d~ 314 (327)
T 1sw6_A 249 SKPNDKNGERKDSILENLD------LKWIIANM----LNAQDSNGDTCLNIAARLGNISIVDALLDYGA----DPFIANK 314 (327)
T ss_dssp -----------CHHHHHCS------HHHHHHHT----TTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTC----CTTCCCT
T ss_pred CCcccccccCCChhHHHHH------HHHHHHhC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCcccCC
Confidence 3334577889999999996 88899886 45678999999999999999999999999998 7899999
Q ss_pred CCCchhhhHhhcC
Q 006173 426 KRINILHIAAMSV 438 (658)
Q Consensus 426 ~G~TpLHlAa~~g 438 (658)
+|+||||+|++.|
T Consensus 315 ~G~TpL~~A~~~g 327 (327)
T 1sw6_A 315 SGLRPVDFGAGLE 327 (327)
T ss_dssp TSCCGGGGTCC--
T ss_pred CCCCHHHHHHhcC
Confidence 9999999999875
No 36
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=1.5e-32 Score=270.65 Aligned_cols=218 Identities=11% Similarity=0.106 Sum_probs=179.2
Q ss_pred ccCCCCcHHHHhhhcCCChHHHHHHHhcCCcc--ccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCC
Q 006173 66 IVDQSSIFEFIVGIPDVPATLVDKLLSKVPRN--CLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDD 143 (658)
Q Consensus 66 ~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~--~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d 143 (658)
.|.+|+|||| .|+..|+.++|+.|++.+... .++.. |..|.||||+|+..|+.+++++|++.++++ +..+.
T Consensus 4 ~d~~g~t~L~-~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~---- 76 (236)
T 1ikn_D 4 LTEDGDSFLH-LAIIHEEKALTMEVIRQVKGDLAFLNFQ-NNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDF---- 76 (236)
T ss_dssp ---CCCCTTH-HHHHTTCSSSSSCCCC-----CCCCCCC-CTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCT----
T ss_pred CCCCCCchhH-HHHHcCChhHHHHHHHHhhccHHHhhcc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC----
Confidence 4789999999 999999999999999985432 58888 999999999999999999999999988875 44455
Q ss_pred CCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-------CCCCCcchhHHHHHHhcCcHHHHHHHHHhCCCcccccc
Q 006173 144 PNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-------PLDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADI 216 (658)
Q Consensus 144 ~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-------~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d 216 (658)
. |.||||+|+..|+.+++++|++++++ ...+..|.||||+|+..|+.+++++|++++.+. +
T Consensus 77 -------~-g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~--- 144 (236)
T 1ikn_D 77 -------R-GNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADV-N--- 144 (236)
T ss_dssp -------T-CCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCT-T---
T ss_pred -------C-CCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-C---
Confidence 6 99999999999999999999999873 457778999999999999999999999874432 0
Q ss_pred CCCCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccc
Q 006173 217 GETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFG 296 (658)
Q Consensus 217 ~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (658)
T Consensus 145 -------------------------------------------------------------------------------- 144 (236)
T 1ikn_D 145 -------------------------------------------------------------------------------- 144 (236)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhhcchhhhhc-CCCcHHHHHHHhCcHHHHHHHH
Q 006173 297 SLRQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDILNTHEEAQN-VFKKPMFKAARLGIYEIVMGIM 375 (658)
Q Consensus 297 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~-~g~tpLh~Aa~~G~~~~v~~Ll 375 (658)
.++. .|.||||+|+..|+.+++++|+
T Consensus 145 -----------------------------------------------------~~~~~~g~tpL~~A~~~~~~~~v~~Ll 171 (236)
T 1ikn_D 145 -----------------------------------------------------AQEPCNGRTALHLAVDLQNPDLVSLLL 171 (236)
T ss_dssp -----------------------------------------------------CCCTTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------------------------------------------------CCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 0222 5889999999999999999999
Q ss_pred hhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhcCCCcccccccccccCCCchhhhHhhcCC
Q 006173 376 NSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPNIYPFFMANIDEKRINILHIAAMSVP 439 (658)
Q Consensus 376 ~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~ 439 (658)
+++ .+ ++.+|..|+||||+|+.+++.+++++|++.|++. ....++.+|.||.+.+.....
T Consensus 172 ~~g-a~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~--~~~~~~~~~~~~~~~~~~~~~ 231 (236)
T 1ikn_D 172 KCG-AD-VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN--LQMLPESEDEESYDTESEFTE 231 (236)
T ss_dssp TTT-CC-SCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGG--GSSCCCCCTTTCCCCC-----
T ss_pred HcC-CC-CCcccCCCCCHHHHHHccCchHHHHHHHHcchhh--hhcCCccchHHHHhhhccccc
Confidence 998 65 5678999999999999999999999999999833 456899999999998876554
No 37
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=4.6e-31 Score=257.41 Aligned_cols=202 Identities=11% Similarity=0.091 Sum_probs=171.0
Q ss_pred CCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHH
Q 006173 81 DVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMA 160 (658)
Q Consensus 81 ~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~A 160 (658)
.|+.+++++|++.+ .+..+.. |..|.||||+||..|+.+++++|++.++++ +..+. . |.||||+|
T Consensus 1 gg~~~~i~~Ll~~g-~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~-----------~-g~t~L~~A 65 (223)
T 2f8y_A 1 GDAPAVISDFIYQG-ASLHNQT-DRTGETALHLAARYSRSDAAKRLLEASADA-NIQDN-----------M-GRTPLHAA 65 (223)
T ss_dssp ----CCEETTEETT-CCTTCCC-TTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-----------T-SCCHHHHH
T ss_pred CCcHHHHHHHHHcC-CCccccc-CCCCCchHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-----------C-CCCHHHHH
Confidence 37888999999984 4434556 889999999999999999999999998875 44444 5 99999999
Q ss_pred HHhCcHHHHHHhccCCC--CCCCCCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCC
Q 006173 161 AKAGKRDAVRHLLPKTR--EPLDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSR 238 (658)
Q Consensus 161 a~~g~~~iv~~Ll~~~~--~~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~ 238 (658)
+..|+.+++++|+++++ ....+..|.||||+|+..|+.++++.|++.+.+. +
T Consensus 66 ~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~------------------------- 119 (223)
T 2f8y_A 66 VSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV-N------------------------- 119 (223)
T ss_dssp HHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-T-------------------------
T ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC-c-------------------------
Confidence 99999999999999887 3567889999999999999999999999864322 1
Q ss_pred cchhhhhhcccccccccCCCCCCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhH
Q 006173 239 LGSWKRLLYQWIPIQEEYNPHPHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIK 318 (658)
Q Consensus 239 l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 318 (658)
T Consensus 120 -------------------------------------------------------------------------------- 119 (223)
T 2f8y_A 120 -------------------------------------------------------------------------------- 119 (223)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhhhhHHHHHHHHHHHHhhhhhhcchhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHH
Q 006173 319 SIRDAKIIHEQTLEILRIMCAGAVDILNTHEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAV 398 (658)
Q Consensus 319 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~ 398 (658)
.+|..|.||||+|+..|+.+++++|++++ .+ ++.+|..|+||||+|+
T Consensus 120 -------------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~-~~~~~~~g~t~L~~A~ 166 (223)
T 2f8y_A 120 -------------------------------AVDDLGKSALHWAAAVNNVDAAVVLLKNG-AN-KDMQNNREETPLFLAA 166 (223)
T ss_dssp -------------------------------CBCTTSCBHHHHHHHTTCHHHHHHHHHTT-CC-TTCCCTTCCCHHHHHH
T ss_pred -------------------------------CcCCCCCcHHHHHHHcCCHHHHHHHHHcC-CC-CCCcCCCCcCHHHHHH
Confidence 13345889999999999999999999998 65 5667999999999999
Q ss_pred HhCCHhHHHHHhcCCCcccccccccccCCCchhhhHhhcCCC
Q 006173 399 EHRREKVFNIIFNFPNIYPFFMANIDEKRINILHIAAMSVPS 440 (658)
Q Consensus 399 ~~~~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~ 440 (658)
..++.+++++|++.|+ +++.+|..|+||||+|++.++.
T Consensus 167 ~~~~~~~v~~Ll~~ga----~~~~~~~~g~t~l~~A~~~~~~ 204 (223)
T 2f8y_A 167 REGSYETAKVLLDHFA----NRDITDHMDRLPRDIAQERMHH 204 (223)
T ss_dssp HHTCHHHHHHHHHTTC----CTTCCCTTCCCHHHHHHHTTCH
T ss_pred HcCCHHHHHHHHHcCC----CCccccccCCCHHHHHHHhcch
Confidence 9999999999999998 6789999999999999999984
No 38
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=4e-31 Score=268.20 Aligned_cols=160 Identities=15% Similarity=0.125 Sum_probs=139.5
Q ss_pred hhhhhhhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCC
Q 006173 27 KIIKDIDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDE 106 (658)
Q Consensus 27 ~~~~~~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~ 106 (658)
.+..+.+++||||.|+..|+.+.++.|+ +. +..++.. +|+|||| .|+..|+.++|++|++++ .+ ++.. |..
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~-g~~~~~~---~g~t~L~-~A~~~g~~~~v~~Ll~~g-a~-~~~~-d~~ 94 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLL-NA-GALKNLL---ENEFPLH-QAATLEDTKIVKILLFSG-LD-DSQF-DDK 94 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHH-HT-TGGGSCC---TTCCHHH-HHTTSSSCHHHHHHHHTT-CC-TTCC-CTT
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHH-hC-CCCCCCC---CCCCHHH-HHHHcCCHHHHHHHHHCC-CC-CCCc-CCC
Confidence 3455677999999999999999999999 44 4445533 6999999 999999999999999994 34 7788 999
Q ss_pred CChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCC-CcHHHHHHHhCcHHHHHHhccCCCCCCCCCcc
Q 006173 107 GSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDD-LLPVHMAAKAGKRDAVRHLLPKTREPLDGRQG 185 (658)
Q Consensus 107 G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G-~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~g 185 (658)
|.||||+|+..|+.+++++|++.++++ +..+. . | .||||+|+..|+.+++++|++++++......|
T Consensus 95 g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~-----------~-g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g 161 (285)
T 3kea_A 95 GNTALYYAVDSGNMQTVKLFVKKNWRL-MFYGK-----------T-GWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAIL 161 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHCGGG-GGCSS-----------S-GGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTH
T ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCC-CccCC-----------C-CCCCHHHHHHHcCCHHHHHHHHhCCCccccccCC
Confidence 999999999999999999999999885 44454 5 7 89999999999999999999999865444599
Q ss_pred hhHHHHHHhcCcHHHHHHHHHhC
Q 006173 186 FVLLKFLIDSNLFDMALALLKCH 208 (658)
Q Consensus 186 ~t~Lh~A~~~g~~~iv~~LL~~~ 208 (658)
.||||+|+..|+.+++++|++++
T Consensus 162 ~t~L~~A~~~g~~~~v~~Ll~~g 184 (285)
T 3kea_A 162 LSCIHITIKNGHVDMMILLLDYM 184 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccHHHHHHHcChHHHHHHHHHcC
Confidence 99999999999999999999873
No 39
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=1.5e-30 Score=255.42 Aligned_cols=129 Identities=16% Similarity=0.042 Sum_probs=96.5
Q ss_pred CCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcc
Q 006173 69 QSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKD 148 (658)
Q Consensus 69 ~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~ 148 (658)
.|+|||| .|+..|+.++|+.|++..+ .+++.. |..|+||||+||..|+.+++++|++.++++..... +.+|
T Consensus 2 ~g~t~L~-~A~~~g~~~~v~~Ll~~~g-~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~------~~~~ 72 (232)
T 2rfa_A 2 IWESPLL-LAAKENDVQALSKLLKFEG-CEVHQR-GAMGETALHIAALYDNLEAAMVLMEAAPELVFEPM------TSEL 72 (232)
T ss_dssp CTTCHHH-HHHHTTCHHHHHHHHTTTC-SCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCC------CSTT
T ss_pred CCCCHHH-HHHHcCCHHHHHHHHHhcC-CCcccC-CCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccc------cccC
Confidence 4788888 8888888888888888733 347777 88888899998888888888888888876422110 1112
Q ss_pred cCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCC-------------CCcchhHHHHHHhcCcHHHHHHHHHhC
Q 006173 149 EEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLD-------------GRQGFVLLKFLIDSNLFDMALALLKCH 208 (658)
Q Consensus 149 ~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~-------------~~~g~t~Lh~A~~~g~~~iv~~LL~~~ 208 (658)
. . |.||||+|+..|+.+++++|++++++ ... |..|.||||+|+..|+.++++.|++++
T Consensus 73 ~-~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 144 (232)
T 2rfa_A 73 Y-E-GQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHG 144 (232)
T ss_dssp T-T-TCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTT
T ss_pred C-C-CcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 2 5 88888888888888888888888874 222 236778888888888888888777764
No 40
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=3.7e-31 Score=260.65 Aligned_cols=219 Identities=11% Similarity=0.106 Sum_probs=171.8
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhcCCC---CCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-C
Q 006173 104 RDEGSEYMEYAVSTGKLNLITTLMGYNEE---LPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-P 179 (658)
Q Consensus 104 d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~---l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~ 179 (658)
|.+|+||||+|+..|+.++++.|++.++. ..+..+. . |.||||+|+..|+.+++++|++++++ .
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~-----------~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 72 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNN-----------L-QQTPLHLAVITNQPEIAEALLGAGCDPE 72 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCT-----------T-CCCHHHHHHHTTCHHHHHCCCSCCCCSC
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCC-----------C-CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 89999999999999999999999988764 2344444 6 99999999999999999999999985 6
Q ss_pred CCCCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCC
Q 006173 180 LDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPH 259 (658)
Q Consensus 180 ~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~ 259 (658)
..|..|.||||+|+..|+.++++.|++.+......
T Consensus 73 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~--------------------------------------------- 107 (236)
T 1ikn_D 73 LRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLH--------------------------------------------- 107 (236)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSS---------------------------------------------
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHH---------------------------------------------
Confidence 78899999999999999999999999875421000
Q ss_pred CCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHH
Q 006173 260 PHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCA 339 (658)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 339 (658)
T Consensus 108 -------------------------------------------------------------------------------- 107 (236)
T 1ikn_D 108 -------------------------------------------------------------------------------- 107 (236)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhcchhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCccccccc-CCChHHHHHHHhCCHhHHHHHhcCCCcccc
Q 006173 340 GAVDILNTHEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNK-DGYDIFKVAVEHRREKVFNIIFNFPNIYPF 418 (658)
Q Consensus 340 ~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~-~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~ 418 (658)
......+..|.||||+|+..|+.+++++|++++ .+. +.+|. .|+||||+|+..|+.+++++|++.|+
T Consensus 108 ------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga---- 175 (236)
T 1ikn_D 108 ------SILKATNYNGHTCLHLASIHGYLGIVELLVSLG-ADV-NAQEPCNGRTALHLAVDLQNPDLVSLLLKCGA---- 175 (236)
T ss_dssp ------CGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHT-CCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTC----
T ss_pred ------HHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----
Confidence 000114456899999999999999999999999 664 55676 99999999999999999999999998
Q ss_pred cccccccCCCchhhhHhhcCCCCCCChhHHhhHHHHHHHHHHHhhcCcchhhhccCCCCCchhhhHH
Q 006173 419 FMANIDEKRINILHIAAMSVPSTEVPGAALQMQRELQWFKAVENCVHPTLQDQLNDKDKTPREVFTK 485 (658)
Q Consensus 419 ~in~~D~~G~TpLHlAa~~g~~~~v~~~~l~~~~~l~~~~~v~~~~~~~~~~~~n~~G~Tp~dl~~~ 485 (658)
+++.+|..|+||||+|+..|+.+.+ . .+.+.-........|.+|+||.+...+
T Consensus 176 ~~~~~~~~g~tpl~~A~~~~~~~~~-----------~---~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 228 (236)
T 1ikn_D 176 DVNRVTYQGYSPYQLTWGRPSTRIQ-----------Q---QLGQLTLENLQMLPESEDEESYDTESE 228 (236)
T ss_dssp CSCCCCTTCCCGGGGCTTSSCHHHH-----------H---HHHTTSCGGGSSCCCCCTTTCCCCC--
T ss_pred CCCcccCCCCCHHHHHHccCchHHH-----------H---HHHHcchhhhhcCCccchHHHHhhhcc
Confidence 7899999999999999999984211 1 111111112355789999999987643
No 41
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=1.5e-30 Score=265.93 Aligned_cols=250 Identities=14% Similarity=0.071 Sum_probs=192.2
Q ss_pred hhhhhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCC
Q 006173 29 IKDIDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGS 108 (658)
Q Consensus 29 ~~~~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~ 108 (658)
..+.++.+|||.||..|+.+.++.|+ +.. ..++.. +.+|.|||| .||..|+.++|++|++.+ .+ ++.. |..|.
T Consensus 35 ~~~~~~~t~l~~A~~~g~~~~v~~Ll-~~g-~~~~~~-~~~g~t~L~-~A~~~g~~~~v~~Ll~~g-a~-~~~~-~~~g~ 107 (299)
T 1s70_B 35 KVKFDDGAVFLAACSSGDTEEVLRLL-ERG-ADINYA-NVDGLTALH-QACIDDNVDMVKFLVENG-AN-INQP-DNEGW 107 (299)
T ss_dssp CCEECHHHHHHHHHHHTCHHHHHHHH-HHC-CCTTCB-CTTCCBHHH-HHHHTTCHHHHHHHHHTT-CC-TTCC-CTTSC
T ss_pred ccccCCccHHHHHHHcCCHHHHHHHH-HcC-CCCccc-CCCCCCHHH-HHHHcCCHHHHHHHHHCC-CC-CCCC-CCCCC
Confidence 34556889999999999999999999 543 445544 889999999 999999999999999984 33 7788 99999
Q ss_pred hHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCCC--CCCCcch
Q 006173 109 EYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTREP--LDGRQGF 186 (658)
Q Consensus 109 TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~~--~~~~~g~ 186 (658)
||||+|+..|+.+++++|++.++++ ...+. . |.||||+|+..|+.+++++|+...... ..+..+.
T Consensus 108 tpL~~A~~~g~~~~v~~Ll~~g~~~-~~~~~-----------~-g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 174 (299)
T 1s70_B 108 IPLHAAASCGYLDIAEYLISQGAHV-GAVNS-----------E-GDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEE 174 (299)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-----------T-SCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhCCCCC-CCcCC-----------C-CCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhh
Confidence 9999999999999999999999886 44455 6 999999999999999999998765421 1222223
Q ss_pred hHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCC
Q 006173 187 VLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSEN 266 (658)
Q Consensus 187 t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~ 266 (658)
++++ ..+..++..........+..|.||||+|+..++.
T Consensus 175 ~~~~--------~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~---------------------------------- 212 (299)
T 1s70_B 175 RIML--------RDARQWLNSGHINDVRHAKSGGTALHVAAAKGYT---------------------------------- 212 (299)
T ss_dssp HHHH--------HHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCH----------------------------------
T ss_pred hHHH--------HHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcH----------------------------------
Confidence 3333 3345666666666666778899999999988522
Q ss_pred CCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhhc
Q 006173 267 VGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDILN 346 (658)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~ 346 (658)
++++.+++ ...
T Consensus 213 -----------------------------------------------------------------~~v~~Ll~----~g~ 223 (299)
T 1s70_B 213 -----------------------------------------------------------------EVLKLLIQ----ARY 223 (299)
T ss_dssp -----------------------------------------------------------------HHHHHHHT----TTC
T ss_pred -----------------------------------------------------------------HHHHHHHH----cCC
Confidence 12222222 223
Q ss_pred chhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhc
Q 006173 347 THEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFN 411 (658)
Q Consensus 347 ~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~ 411 (658)
+.+.+|..|.||||+|+..|+.+++++|++++ .+ ++.+|..|+||||+|++.....+.+++-+
T Consensus 224 d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-ad-~~~~d~~g~t~l~~A~~~~~~~l~~l~~~ 286 (299)
T 1s70_B 224 DVNIKDYDGWTPLHAAAHWGKEEACRILVENL-CD-MEAVNKVGQTAFDVADEDILGYLEELQKK 286 (299)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CC-TTCCCTTSCCTTTSCCSGGGHHHHHHHHH
T ss_pred CCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcC-CC-CCCcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 34457788999999999999999999999999 65 56789999999999977544433334333
No 42
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=9.2e-30 Score=250.66 Aligned_cols=179 Identities=15% Similarity=0.102 Sum_probs=151.7
Q ss_pred hhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHH
Q 006173 32 IDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYM 111 (658)
Q Consensus 32 ~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpL 111 (658)
-++.++|+.|+..|+.+.++.++ +. +..++.+ +.+|.|||| .|+..|+.++|++|++.+ .+..... +..|.|||
T Consensus 7 ~~~~~~l~~A~~~g~~~~~~~Ll-~~-g~~~~~~-~~~g~t~L~-~A~~~~~~~~v~~Ll~~~-~~~~~~~-~~~~~t~L 80 (240)
T 3eu9_A 7 DYSTWDIVKATQYGIYERCRELV-EA-GYDVRQP-DKENVTLLH-WAAINNRIDLVKYYISKG-AIVDQLG-GDLNSTPL 80 (240)
T ss_dssp CGGGCCHHHHHHTTCHHHHHHHH-HT-TCCTTCC-CTTSCCHHH-HHHHTTCHHHHHHHHHTT-CCTTCCB-TTTTBCHH
T ss_pred cccchHHHHHHHcCChHHHHHHH-Hc-CCCcCCC-CCCCCCHHH-HHHHhCCHHHHHHHHHcC-Ccchhhc-CCcCCChh
Confidence 45668999999999999999999 43 3445444 788999999 999999999999999994 3434445 67799999
Q ss_pred HHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHH
Q 006173 112 EYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLK 190 (658)
Q Consensus 112 h~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh 190 (658)
|+|+..|+.+++++|++.++++ ...+. . |.||||+|+..|+.+++++|++++++ ...+..|.||||
T Consensus 81 ~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-----------~-g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~ 147 (240)
T 3eu9_A 81 HWATRQGHLSMVVQLMKYGADP-SLIDG-----------E-GCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLM 147 (240)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCT-TCCCT-----------T-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCC-cccCC-----------C-CCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHH
Confidence 9999999999999999998875 44444 6 99999999999999999999999985 678899999999
Q ss_pred HHHhcCc-HHHHHHHHHhCCCccccccC-CCCcHhHHHhcCC
Q 006173 191 FLIDSNL-FDMALALLKCHPMIARADIG-ETGKILESLSKRP 230 (658)
Q Consensus 191 ~A~~~g~-~~iv~~LL~~~~~~~~~~d~-~g~TpLh~Aa~~~ 230 (658)
+|+..++ .++++.|++.+.+. +..+. .|.||||+|+..+
T Consensus 148 ~a~~~~~~~~~~~~L~~~~~~~-~~~~~~~g~t~L~~A~~~~ 188 (240)
T 3eu9_A 148 WAAYRTHSVDPTRLLLTFNVSV-NLGDKYHKNTALHWAVLAG 188 (240)
T ss_dssp HHHHHCCSSTTHHHHHHTTCCT-TCCCTTTCCCHHHHHHHHT
T ss_pred HHHHhCChHHHHHHHHhcCCCc-chhhccCCCcHHHHHHHcC
Confidence 9997666 78888888886655 44554 8999999999885
No 43
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=8.8e-30 Score=244.05 Aligned_cols=147 Identities=13% Similarity=0.057 Sum_probs=118.9
Q ss_pred cCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCC
Q 006173 67 VDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNI 146 (658)
Q Consensus 67 ~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~ 146 (658)
+..+.|||| .|+..|+.+.|+.|++.++ ..++.. |.+|.||||+|+..|+.+++++|++.++++ +..+.
T Consensus 2 ~~~~~~~L~-~A~~~g~~~~v~~ll~~~~-~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~------- 70 (201)
T 3hra_A 2 KTYEVGALL-EAANQRDTKKVKEILQDTT-YQVDEV-DTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNS------- 70 (201)
T ss_dssp -CCCTTHHH-HHHHTTCHHHHHHHHTCTT-CCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-------
T ss_pred CcccccHHH-HHHHhccHHHHHHHHHcCC-CCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCC-------
Confidence 456889999 9999999999999998843 348888 999999999999999999999999988875 44444
Q ss_pred cccCCCCCcHHHHHHHhCcHHHHHHhccCCC--CCCCCCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhH
Q 006173 147 KDEEKDDLLPVHMAAKAGKRDAVRHLLPKTR--EPLDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILE 224 (658)
Q Consensus 147 ~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~--~~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh 224 (658)
. |.||||+|+..|+.+++++|++++. ....+..|.||||+|+..|+.++++.|+++++...+.+|.+|.||||
T Consensus 71 ----~-g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~ 145 (201)
T 3hra_A 71 ----I-SDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALI 145 (201)
T ss_dssp ----T-SCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHH
T ss_pred ----C-CCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHH
Confidence 5 9999999999999999999995544 36788889999999999999999999999875555555555555555
Q ss_pred HHhcC
Q 006173 225 SLSKR 229 (658)
Q Consensus 225 ~Aa~~ 229 (658)
+|+..
T Consensus 146 ~A~~~ 150 (201)
T 3hra_A 146 EAVGL 150 (201)
T ss_dssp HHHHS
T ss_pred HHHHh
Confidence 55444
No 44
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=1.4e-29 Score=248.56 Aligned_cols=170 Identities=16% Similarity=0.083 Sum_probs=140.4
Q ss_pred hhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCcc---ccccccCCCCChH
Q 006173 34 SYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRN---CLQNFARDEGSEY 110 (658)
Q Consensus 34 ~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~---~l~~~~d~~G~Tp 110 (658)
+.||||.|+..|+.+.++.++ +..+..++.+ +.+|+|||| .|+..|+.++|++|++.+... ..+.. |..|.||
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll-~~~g~~~~~~-~~~g~t~L~-~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~-~~~g~t~ 78 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLL-KFEGCEVHQR-GAMGETALH-IAALYDNLEAAMVLMEAAPELVFEPMTSE-LYEGQTA 78 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHH-TTTCSCTTCC-CTTSCCHHH-HHHHTTCHHHHHHHHHHCGGGGGCCCCST-TTTTCCH
T ss_pred CCCHHHHHHHcCCHHHHHHHH-HhcCCCcccC-CCCCCCHHH-HHHHcCCHHHHHHHHHcCchhcccccccc-CCCCcCH
Confidence 569999999999999999999 6546666655 889999999 999999999999999995321 12556 7899999
Q ss_pred HHHHHhcCCHHHHHHHHhcCCCCCccccc--CCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchh
Q 006173 111 MEYAVSTGKLNLITTLMGYNEELPNIKVE--KKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFV 187 (658)
Q Consensus 111 Lh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~--~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t 187 (658)
||+|+..|+.+++++|++.++++...... ...+++..|. . |.||||+|+..|+.+++++|++++++ +.+|..|.|
T Consensus 79 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~-~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t 156 (232)
T 2rfa_A 79 LHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIY-Y-GEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNT 156 (232)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCC-C-CSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeeccccccc-C-CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Confidence 99999999999999999999886443221 0112233333 5 99999999999999999999999986 678999999
Q ss_pred HHHHHHhcCcHHHH----HHHHHhCC
Q 006173 188 LLKFLIDSNLFDMA----LALLKCHP 209 (658)
Q Consensus 188 ~Lh~A~~~g~~~iv----~~LL~~~~ 209 (658)
|||+|+..|+.+++ +.|++.+.
T Consensus 157 ~L~~A~~~~~~~~~~~i~~~Ll~~g~ 182 (232)
T 2rfa_A 157 VLHILILQPNKTFACQMYNLLLSYDG 182 (232)
T ss_dssp HHHHHHTCSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCChHHHHHHHHHHHhcCC
Confidence 99999999999988 77776643
No 45
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=2.8e-30 Score=260.37 Aligned_cols=159 Identities=16% Similarity=0.143 Sum_probs=120.4
Q ss_pred ccCCCCcHHHHhhhcCCChHHHHHHHhcC---Cccccc----cccCCCCChHHHHHHhc---CCHHHHHHHHhcCCCCCc
Q 006173 66 IVDQSSIFEFIVGIPDVPATLVDKLLSKV---PRNCLQ----NFARDEGSEYMEYAVST---GKLNLITTLMGYNEELPN 135 (658)
Q Consensus 66 ~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~---~~~~l~----~~~d~~G~TpLh~Aa~~---G~~~iv~~Ll~~~~~l~~ 135 (658)
.+.+|+|||| .||..|+.++|+.|++.+ +.+ ++ .. |..|+||||+||.. |+.++|++|++.+++...
T Consensus 9 ~d~~g~t~L~-~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~~~~~-~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~ 85 (273)
T 2pnn_A 9 PRLYDRRSIF-DAVAQSNCQELESLLPFLQRSKKR-LTDSEFKD-PETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDS 85 (273)
T ss_dssp --CCCHHHHH-HHHHTTCSSTTTTHHHHHHHSCCC-TTSGGGSC-TTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTC
T ss_pred CCcccchHHH-HHHHcCCHHHHHHHHHHHhhcccc-cCCccccc-CcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccc
Confidence 3788999999 999999999999999853 222 22 35 78999999999986 999999999998765322
Q ss_pred ccccCCCCCCCcccC-CCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCC--------------cchhHHHHHHhcCcHH
Q 006173 136 IKVEKKDDPNIKDEE-KDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGR--------------QGFVLLKFLIDSNLFD 199 (658)
Q Consensus 136 ~~~~~~~d~~~~~~~-~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~--------------~g~t~Lh~A~~~g~~~ 199 (658)
.... .+.+..+.+ . |.||||+|+..|+.++|++|++++++ ...+. .|.||||+|+..|+.+
T Consensus 86 ~~~~--i~~~~~~~d~~-g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~ 162 (273)
T 2pnn_A 86 LKQF--VNASYTDSYYK-GQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLA 162 (273)
T ss_dssp HHHH--HTCCCCSTTTT-TCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHH
T ss_pred hhHH--hhcccccccCC-CCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHH
Confidence 1100 001111111 5 99999999999999999999999985 44554 7999999999999999
Q ss_pred HHHHHHHh--CCCccccccCCCCcHhHHHhcCC
Q 006173 200 MALALLKC--HPMIARADIGETGKILESLSKRP 230 (658)
Q Consensus 200 iv~~LL~~--~~~~~~~~d~~g~TpLh~Aa~~~ 230 (658)
++++|++. .+...+.+|.+|.||||+|+..+
T Consensus 163 ~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~ 195 (273)
T 2pnn_A 163 IVKFLLQNSWQPADISARDSVGNTVLHALVEVA 195 (273)
T ss_dssp HHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHC
T ss_pred HHHHHHhcccCCCCceeeCCCCCcHHHHHHHcc
Confidence 99999994 34455667777777777777653
No 46
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=7.3e-29 Score=237.61 Aligned_cols=102 Identities=7% Similarity=-0.005 Sum_probs=87.0
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCC
Q 006173 104 RDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDG 182 (658)
Q Consensus 104 d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~ 182 (658)
+..+.||||.||..|+.+.++.|+..++..++..+. . |.||||+|+..|+.+++++|++++++ +..+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~-----------~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 69 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDT-----------E-GNTPLNIAVHNNDIEIAKALIDRGADINLQN 69 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCT-----------T-SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCC-----------C-CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 567999999999999999999999988744455555 6 99999999999999999999999985 6788
Q ss_pred CcchhHHHHHHhcCcHHHHHHHHHhCCCccccccC
Q 006173 183 RQGFVLLKFLIDSNLFDMALALLKCHPMIARADIG 217 (658)
Q Consensus 183 ~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~ 217 (658)
..|.||||+|+..|+.++++.|++..+...+.+|.
T Consensus 70 ~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~ 104 (201)
T 3hra_A 70 SISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNR 104 (201)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhccCcccccccC
Confidence 99999999999999999999999775544333333
No 47
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=1.8e-29 Score=251.77 Aligned_cols=154 Identities=18% Similarity=0.146 Sum_probs=116.7
Q ss_pred CCCcHHHHhhhcCCChH----HHHHHHhcCCcccccc----ccCCCCChHHHHHHhc---CCHHHHHHHHhcCCCCCccc
Q 006173 69 QSSIFEFIVGIPDVPAT----LVDKLLSKVPRNCLQN----FARDEGSEYMEYAVST---GKLNLITTLMGYNEELPNIK 137 (658)
Q Consensus 69 ~g~T~Lh~~Aa~~g~~~----iv~~Ll~~~~~~~l~~----~~d~~G~TpLh~Aa~~---G~~~iv~~Ll~~~~~l~~~~ 137 (658)
.|+|||| .||..|+.+ ++++|++.+ .+ ++. . |..|+||||+||.. |+.+++++|++.+++.....
T Consensus 1 ~G~t~L~-~A~~~g~~~~v~~ll~~l~~~g-~~-i~~~~~~~-d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~ 76 (256)
T 2etb_A 1 FDRDRLF-SVVSRGVPEELTGLLEYLRWNS-KY-LTDSAYTE-GSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPK 76 (256)
T ss_dssp CCHHHHH-HHHHHTCGGGGTTHHHHHHHHT-CC-TTSGGGSB-TTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSS
T ss_pred CCccHHH-HHHHcCCHHHHHHHHHHHHHcC-CC-cccccccC-CCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchh
Confidence 4789999 999999997 445666663 33 665 7 89999999999999 99999999999887653222
Q ss_pred ccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCc-------------chhHHHHHHhcCcHHHHHH
Q 006173 138 VEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQ-------------GFVLLKFLIDSNLFDMALA 203 (658)
Q Consensus 138 ~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~-------------g~t~Lh~A~~~g~~~iv~~ 203 (658)
.. .+.+..+.+..|.||||+|+..|+.+++++|++++++ +..+.. |.||||+|+..|+.+++++
T Consensus 77 ~~--~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~ 154 (256)
T 2etb_A 77 PL--VNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTY 154 (256)
T ss_dssp CG--GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHH
T ss_pred hh--cccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 10 0111222222299999999999999999999999985 445554 9999999999999999999
Q ss_pred HHHh--CCCccccccCCCCcHhHHHhc
Q 006173 204 LLKC--HPMIARADIGETGKILESLSK 228 (658)
Q Consensus 204 LL~~--~~~~~~~~d~~g~TpLh~Aa~ 228 (658)
|+++ .+...+.+|.+|.||||+|+.
T Consensus 155 Ll~~~~~ga~~n~~d~~g~TpLh~A~~ 181 (256)
T 2etb_A 155 LLENPHQPASLEATDSLGNTVLHALVM 181 (256)
T ss_dssp HHHCSSCCCCTTCCCTTSCCHHHHHHH
T ss_pred HHhccccCCCcCccCCCCCCHHHHHHH
Confidence 9994 344456666667777776665
No 48
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=1.8e-28 Score=227.47 Aligned_cols=156 Identities=16% Similarity=0.193 Sum_probs=138.8
Q ss_pred HHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHH
Q 006173 36 KQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAV 115 (658)
Q Consensus 36 ~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa 115 (658)
++|+.||+.|+.+.|+.|| + .+.+++.+ |.+|+|||| .|+..|+.++++.|++.+ .+ ++.+ |.+|+||||+||
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll-~-~Gadvn~~-d~~g~t~l~-~a~~~~~~~~~~~ll~~g-ad-~~~~-d~~g~TpLh~A~ 78 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLI-E-NGADVNAS-DSDGRTPLH-HAAENGHKEVVKLLISKG-AD-VNAK-DSDGRTPLHHAA 78 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHH-H-TTCCTTCC-CTTSCCHHH-HHHHTTCHHHHHHHHHTT-CC-TTCC-CTTSCCHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHH-H-CCCCCCCc-CCCCCCHHH-HHHHcCCHHHHHHHHhcc-cc-hhhh-ccCCCCHHHHHH
Confidence 5799999999999999999 4 45556655 889999999 999999999999999994 34 7888 999999999999
Q ss_pred hcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHHHh
Q 006173 116 STGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLID 194 (658)
Q Consensus 116 ~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~ 194 (658)
..|+.++|++|+++++++ +.++. . |+||||+||..|+.++|++|++++++ ..+|..|.||||+|+.
T Consensus 79 ~~g~~~~v~~Ll~~gadv-n~~d~-----------~-G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~ 145 (169)
T 4gpm_A 79 ENGHKEVVKLLISKGADV-NAKDS-----------D-GRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLARE 145 (169)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCT-----------T-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HcCCHHHHHHHHHCcCCC-CCCCC-----------C-CCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 999999999999999886 45555 6 99999999999999999999999996 6789999999999999
Q ss_pred cCcHHHHHHHHHhCCCc
Q 006173 195 SNLFDMALALLKCHPMI 211 (658)
Q Consensus 195 ~g~~~iv~~LL~~~~~~ 211 (658)
.|+.+++++|++++.++
T Consensus 146 ~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 146 HGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp TTCHHHHHHHHTC----
T ss_pred cCCHHHHHHHHHCCCCc
Confidence 99999999999987654
No 49
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=6.3e-29 Score=250.42 Aligned_cols=175 Identities=14% Similarity=0.139 Sum_probs=133.8
Q ss_pred hhhhhhhhHHHHHHHHhCCHHHHHHHHhhc---Cccccc---ccccCCCCcHHHHhhhcC---CChHHHHHHHhcCCcc-
Q 006173 28 IIKDIDSYKQVTRYILENDWKGLEDYIMSK---TPNALT---CIIVDQSSIFEFIVGIPD---VPATLVDKLLSKVPRN- 97 (658)
Q Consensus 28 ~~~~~~~~~~L~~A~~~G~~~~v~~ll~~~---~~~~~~---~~~~~~g~T~Lh~~Aa~~---g~~~iv~~Ll~~~~~~- 97 (658)
...+.++.+|||.||..|+.+.++.|+ +. .+..++ ...+..|+|||| .||.. |+.++|++|++.+...
T Consensus 7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~~~~~~~~~~~~~~~~~~~g~tpL~-~A~~~~~~g~~~~v~~Ll~~ga~~~ 84 (273)
T 2pnn_A 7 KPPRLYDRRSIFDAVAQSNCQELESLL-PFLQRSKKRLTDSEFKDPETGKTCLL-KAMLNLHNGQNDTIALLLDVARKTD 84 (273)
T ss_dssp ----CCCHHHHHHHHHTTCSSTTTTHH-HHHHHSCCCTTSGGGSCTTTCCCHHH-HHHHSCBTTBCHHHHHHHHHHHHTT
T ss_pred CCCCcccchHHHHHHHcCCHHHHHHHH-HHHhhcccccCCcccccCcCCCCHHH-HHHHHHhcCChHHHHHHHHhhcccc
Confidence 345667899999999999999999998 42 222222 134779999999 99976 9999999999985210
Q ss_pred --------ccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCccccc---CCCCCCCcccCCCCCcHHHHHHHhCcH
Q 006173 98 --------CLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVE---KKDDPNIKDEEKDDLLPVHMAAKAGKR 166 (658)
Q Consensus 98 --------~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~---~~~d~~~~~~~~~G~TpLh~Aa~~g~~ 166 (658)
..... |..|.||||+|+..|+.++|++|++.++++...... ...+.+..+. . |.||||+|+..|+.
T Consensus 85 ~~~~~i~~~~~~~-d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~-~-g~tpL~~A~~~g~~ 161 (273)
T 2pnn_A 85 SLKQFVNASYTDS-YYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFY-F-GELPLSLAACTNQL 161 (273)
T ss_dssp CHHHHHTCCCCST-TTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCC-S-CBSHHHHHHHTTCH
T ss_pred chhHHhhcccccc-cCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcccccccccccccccccc-C-CCCHHHHHHHcCCH
Confidence 12225 779999999999999999999999999886443320 0011112222 4 99999999999999
Q ss_pred HHHHHhcc---CCCC-CCCCCcchhHHHHHHhcCc---------HHHHHHHHHh
Q 006173 167 DAVRHLLP---KTRE-PLDGRQGFVLLKFLIDSNL---------FDMALALLKC 207 (658)
Q Consensus 167 ~iv~~Ll~---~~~~-~~~~~~g~t~Lh~A~~~g~---------~~iv~~LL~~ 207 (658)
+++++|++ ++++ +.+|..|.||||+|+..|+ .++++.|++.
T Consensus 162 ~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ 215 (273)
T 2pnn_A 162 AIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILIL 215 (273)
T ss_dssp HHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHh
Confidence 99999999 7775 6789999999999999887 6777777765
No 50
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.96 E-value=2.2e-29 Score=260.62 Aligned_cols=275 Identities=10% Similarity=-0.007 Sum_probs=184.3
Q ss_pred CCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccc--cCCCCCC
Q 006173 68 DQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKV--EKKDDPN 145 (658)
Q Consensus 68 ~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~--~~~~d~~ 145 (658)
..+.+|+| ..+.++|++|++.| .+ ++.. |..|.|++| |+.++|+.|++++.+...... ....+..
T Consensus 21 ~~~~~~~~-----~~~~dlv~~ll~~g-a~-i~~~-~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~ 87 (327)
T 1sw6_A 21 DRTAGPII-----TFTHDLTSDFLSSP-LK-IMKA-LPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSS 87 (327)
T ss_dssp ----CCEE-----ECCTTCCCSTTTSS-CC-CEEC-BCCCCCCCH-----HHHHHHHHHHHHHHC---------------
T ss_pred cccccchh-----hhcCchHHHHhhCC-cc-cccC-CCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccc
Confidence 34456666 35568899999994 34 7888 999999988 999999999999865321000 0000000
Q ss_pred CcccCC--CCCcHHHHHHHhCcHHHHHHhccCCCC-CC-CCCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCc
Q 006173 146 IKDEEK--DDLLPVHMAAKAGKRDAVRHLLPKTRE-PL-DGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGK 221 (658)
Q Consensus 146 ~~~~~~--~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~-~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~T 221 (658)
-++... ...+.+|+|+..+..+++++|++.+.+ +. +|..|.||||+|+..|+.+++++||+++. .++.+|.+|.|
T Consensus 88 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Ga-d~n~~d~~g~T 166 (327)
T 1sw6_A 88 NRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGS-NRLYGDNMGES 166 (327)
T ss_dssp ----------------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTBCCTTCCC
T ss_pred cccccccCCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCCC
Confidence 000001 022346899999999999999999985 55 79999999999999999999999999864 45789999999
Q ss_pred HhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHH
Q 006173 222 ILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQK 301 (658)
Q Consensus 222 pLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (658)
|||+|+..++..
T Consensus 167 pLh~A~~~g~~~-------------------------------------------------------------------- 178 (327)
T 1sw6_A 167 CLVKAVKSVNNY-------------------------------------------------------------------- 178 (327)
T ss_dssp HHHHHHHSSHHH--------------------------------------------------------------------
T ss_pred HHHHHHHhcccc--------------------------------------------------------------------
Confidence 999999985210
Q ss_pred HHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhhcchhhhhcCCCcHHHHHHH----hCcHHHHHHHHhh
Q 006173 302 LKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDILNTHEEAQNVFKKPMFKAAR----LGIYEIVMGIMNS 377 (658)
Q Consensus 302 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~g~tpLh~Aa~----~G~~~~v~~Ll~~ 377 (658)
..+.+..+++.+ ..+.+.+|..|+||||+|+. .|+.++++.|++.
T Consensus 179 ----------------------------~~~~~~~ll~~~---~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~ 227 (327)
T 1sw6_A 179 ----------------------------DSGTFEALLDYL---YPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDI 227 (327)
T ss_dssp ----------------------------HTTCHHHHHHHH---GGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred ----------------------------cHHHHHHHHHhh---hccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHH
Confidence 000011111111 12234577889999999999 9999999999987
Q ss_pred cCC-------------------CcccccccCCChHHHHHHHhCCHhHHHHHhcCCCcccccccccccCCCchhhhHhhcC
Q 006173 378 YFP-------------------WSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPNIYPFFMANIDEKRINILHIAAMSV 438 (658)
Q Consensus 378 ~~~-------------------~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g 438 (658)
+ . ..++.+|..|+||||.|+. +++|++. .+|.+|.+|+||||+|++.|
T Consensus 228 ~-~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~------~~n~~d~~G~TpLh~A~~~g 294 (327)
T 1sw6_A 228 L-MGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN------MLNAQDSNGDTCLNIAARLG 294 (327)
T ss_dssp H-HHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHH------TTTCCCTTSCCHHHHHHHHC
T ss_pred H-HHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh------CCCCCCCCCCCHHHHHHHcC
Confidence 2 1 2356678999999999985 8899988 47999999999999999999
Q ss_pred CCCCCChhHHhhHHHHHHHHHHHhhcC-cchhhhccCCCCCchhhhHH
Q 006173 439 PSTEVPGAALQMQRELQWFKAVENCVH-PTLQDQLNDKDKTPREVFTK 485 (658)
Q Consensus 439 ~~~~v~~~~l~~~~~l~~~~~v~~~~~-~~~~~~~n~~G~Tp~dl~~~ 485 (658)
+.+. ++.++. ....+.+|++|+||++++.+
T Consensus 295 ~~~~-----------------v~~Ll~~Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 295 NISI-----------------VDALLDYGADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp CHHH-----------------HHHHHHTTCCTTCCCTTSCCGGGGTCC
T ss_pred CHHH-----------------HHHHHHcCCCCcccCCCCCCHHHHHHh
Confidence 8422 121111 22367899999999998743
No 51
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.95 E-value=3.5e-28 Score=242.46 Aligned_cols=172 Identities=14% Similarity=0.051 Sum_probs=132.1
Q ss_pred hhHHHHHHHHhCCHHHHHHHHhh---cCcccccc---cccCCCCcHHHHhhhcC---CChHHHHHHHhcCCccc-----c
Q 006173 34 SYKQVTRYILENDWKGLEDYIMS---KTPNALTC---IIVDQSSIFEFIVGIPD---VPATLVDKLLSKVPRNC-----L 99 (658)
Q Consensus 34 ~~~~L~~A~~~G~~~~v~~ll~~---~~~~~~~~---~~~~~g~T~Lh~~Aa~~---g~~~iv~~Ll~~~~~~~-----l 99 (658)
+.+|||.||..|+.+.++.++ + ..+..++. ..+.+|+|||| .|+.. |+.++|++|++.+.... +
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll-~~l~~~g~~i~~~~~~~d~~g~t~L~-~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 79 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLL-EYLRWNSKYLTDSAYTEGSTGKTCLM-KAVLNLQDGVNACIMPLLQIDKDSGNPKPLV 79 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHH-HHHHHHTCCTTSGGGSBTTTTBCHHH-HHHHTCBTTBCTTHHHHHHHHHHTTCSSCGG
T ss_pred CccHHHHHHHcCCHHHHHHHH-HHHHHcCCCcccccccCCCCCCCHHH-HHHHccccchHHHHHHHHhcCCcccchhhhc
Confidence 579999999999998665544 2 33444554 24889999999 99999 99999999999852210 1
Q ss_pred ----ccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcc-
Q 006173 100 ----QNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLP- 174 (658)
Q Consensus 100 ----~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~- 174 (658)
... |..|.||||+|+..|+.+++++|++.++++..........++....+.+|.||||+|+..|+.+++++|++
T Consensus 80 ~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ 158 (256)
T 2etb_A 80 NAQCTDE-FYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLEN 158 (256)
T ss_dssp GCCCCST-TTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred ccccccc-cccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 123 57899999999999999999999999988643322111111222222239999999999999999999999
Q ss_pred --CCCC-CCCCCcchhHHHHHHh--cCcHH-------HHHHHHHhC
Q 006173 175 --KTRE-PLDGRQGFVLLKFLID--SNLFD-------MALALLKCH 208 (658)
Q Consensus 175 --~~~~-~~~~~~g~t~Lh~A~~--~g~~~-------iv~~LL~~~ 208 (658)
++++ +.+|..|.||||+|+. .++.+ +++.|++.+
T Consensus 159 ~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~g 204 (256)
T 2etb_A 159 PHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMG 204 (256)
T ss_dssp SSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcC
Confidence 7875 6889999999999998 77887 777777763
No 52
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=3.9e-28 Score=242.68 Aligned_cols=159 Identities=16% Similarity=0.099 Sum_probs=121.6
Q ss_pred cCCCCcHHHHhhhcCCChHHHHHHHh----cCCccccccc---cCCCCChHHHHHH---hcCCHHHHHHHHhcCCCCCcc
Q 006173 67 VDQSSIFEFIVGIPDVPATLVDKLLS----KVPRNCLQNF---ARDEGSEYMEYAV---STGKLNLITTLMGYNEELPNI 136 (658)
Q Consensus 67 ~~~g~T~Lh~~Aa~~g~~~iv~~Ll~----~~~~~~l~~~---~d~~G~TpLh~Aa---~~G~~~iv~~Ll~~~~~l~~~ 136 (658)
+..|+|+|| .||+.|+.+.|+.|++ .+ .+ ++.. .|..|.||||+|+ +.|+.+++++|++.+++....
T Consensus 2 ~~~~~~~L~-~A~~~g~~~~v~~ll~~l~~~~-~~-~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~ 78 (260)
T 3jxi_A 2 KVFNRPILF-DIVSRGSPDGLEGLLSFLLTHK-KR-LTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNM 78 (260)
T ss_dssp CCCCHHHHH-HHHHHTCGGGGTTHHHHHHHHT-CC-TTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCH
T ss_pred ccchHHHHH-HHHHhCCHHHHHHHHHHHHhcC-CC-cchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccch
Confidence 567889999 9999999996666665 53 22 4433 0377999999999 779999999999987643221
Q ss_pred cccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCC--------------CcchhHHHHHHhcCcHHHH
Q 006173 137 KVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDG--------------RQGFVLLKFLIDSNLFDMA 201 (658)
Q Consensus 137 ~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~--------------~~g~t~Lh~A~~~g~~~iv 201 (658)
......+.+.+|. . |+||||+||..|+.++|++|++++++ +..+ ..|.||||+|+..|+.+++
T Consensus 79 ~~~~~~~~~~~d~-~-g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v 156 (260)
T 3jxi_A 79 REFINSPFRDVYY-R-GQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIV 156 (260)
T ss_dssp HHHHTCCBCCSSE-E-SBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHH
T ss_pred Hhhhccccccccc-C-CCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHH
Confidence 1100011111222 5 99999999999999999999999985 4455 5899999999999999999
Q ss_pred HHHHHh--CCCccccccCCCCcHhHHHhcCC
Q 006173 202 LALLKC--HPMIARADIGETGKILESLSKRP 230 (658)
Q Consensus 202 ~~LL~~--~~~~~~~~d~~g~TpLh~Aa~~~ 230 (658)
++|++. .+..++.+|.+|.||||+|++.+
T Consensus 157 ~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~ 187 (260)
T 3jxi_A 157 HYLTENGHKQADLRRQDSRGNTVLHALVAIA 187 (260)
T ss_dssp HHHHHCSSCCCCTTCCCTTSCCHHHHHHHHC
T ss_pred HHHHhccccCCCCcccCCCCCcHHHHHHHhc
Confidence 999994 35566889999999999999764
No 53
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.95 E-value=3.6e-29 Score=261.84 Aligned_cols=167 Identities=13% Similarity=0.099 Sum_probs=101.5
Q ss_pred hhhhhHHHHHHHH-hCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCcc-ccccccCCCCC
Q 006173 31 DIDSYKQVTRYIL-ENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRN-CLQNFARDEGS 108 (658)
Q Consensus 31 ~~~~~~~L~~A~~-~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~-~l~~~~d~~G~ 108 (658)
...+.+.++.|.. .++.+.++.++ +. +.+++|||| .||..|+.++|++|++.+.+. ..+.. |..|.
T Consensus 62 ~~~~ll~~~~a~~~~~~~~~~~~l~-~~---------g~~~~T~Lh-~Aa~~G~~e~v~~Ll~~ga~~~~~~~~-~~~~~ 129 (376)
T 2aja_A 62 QVRQLLCLYYAHYNRNAKQLWSDAH-KK---------GIKSEVICF-VAAITGCSSALDTLCLLLTSDEIVKVI-QAENY 129 (376)
T ss_dssp HHHHHHHHHHHHTTTTCTTHHHHHH-HH---------TCCHHHHHH-HHHHHCCHHHHHHHTTC--CCSSCC---CHHHH
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHH-Hc---------CCCcCCHHH-HHHHcCCHHHHHHHHHcCCcHHHHHHh-ccCCC
Confidence 3345555666555 35555555555 22 223457777 777777777777777764322 11223 55667
Q ss_pred hHHHHHHhcCCHHHHHHHHhcCCCCC--cccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCCC-C--CCC
Q 006173 109 EYMEYAVSTGKLNLITTLMGYNEELP--NIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTREP-L--DGR 183 (658)
Q Consensus 109 TpLh~Aa~~G~~~iv~~Ll~~~~~l~--~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~~-~--~~~ 183 (658)
||||+||..|+.++|++|++.+++.. .... . +.||||+||..|+.++|++|++++++. . .|.
T Consensus 130 tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~------------~-~~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~ 196 (376)
T 2aja_A 130 QAFRLAAENGHLHVLNRLCELAPTEIMAMIQA------------E-NYHAFRLAAENGHLHVLNRLCELAPTEATAMIQA 196 (376)
T ss_dssp HHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSH------------H-HHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCccccccCC------------C-CCCHHHHHHHCCCHHHHHHHHHcCCccchhccCC
Confidence 77777777777777777777775421 1112 2 467777777777777777777777642 2 566
Q ss_pred cchhHHHHHH-hcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCC
Q 006173 184 QGFVLLKFLI-DSNLFDMALALLKCHPMIARADIGETGKILESLSKRP 230 (658)
Q Consensus 184 ~g~t~Lh~A~-~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~ 230 (658)
.|.||||+|+ ..|+.+++++|++.+ . .|.||||+|+++|
T Consensus 197 ~g~TpL~~Aa~~~G~~eiv~~Ll~~g-a-------~~~taL~~Aa~~g 236 (376)
T 2aja_A 197 ENYYAFRWAAVGRGHHNVINFLLDCP-V-------MLAYAEIHEFEYG 236 (376)
T ss_dssp HHHHHHHHHHSTTCCHHHHHHHTTSH-H-------HHHHHHHCTTTTT
T ss_pred CCCCHHHHHHHHCCCHHHHHHHHhCC-C-------ccchHHHHHHHCC
Confidence 6777777777 777777777777632 1 2667777777765
No 54
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.95 E-value=5.5e-27 Score=217.43 Aligned_cols=154 Identities=19% Similarity=0.253 Sum_probs=135.0
Q ss_pred hHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchh
Q 006173 109 EYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFV 187 (658)
Q Consensus 109 TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t 187 (658)
++|+.||+.|+.++|+.|++.|+++ +.++. . |+||||+|+..|+.+++++|++++++ ..+|.+|.|
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadv-n~~d~-----------~-g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~T 72 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADV-NASDS-----------D-GRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRT 72 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-----------T-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCC-CCcCC-----------C-CCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCC
Confidence 5799999999999999999999886 45555 6 99999999999999999999999995 678999999
Q ss_pred HHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCCC
Q 006173 188 LLKFLIDSNLFDMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSENV 267 (658)
Q Consensus 188 ~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 267 (658)
|||+|+..|+.++++.|++++.++ +.
T Consensus 73 pLh~A~~~g~~~~v~~Ll~~gadv-n~----------------------------------------------------- 98 (169)
T 4gpm_A 73 PLHHAAENGHKEVVKLLISKGADV-NA----------------------------------------------------- 98 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCT-TC-----------------------------------------------------
T ss_pred HHHHHHHcCCHHHHHHHHHCcCCC-CC-----------------------------------------------------
Confidence 999999999999999999875432 11
Q ss_pred CCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhhcc
Q 006173 268 GGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDILNT 347 (658)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 347 (658)
T Consensus 99 -------------------------------------------------------------------------------- 98 (169)
T 4gpm_A 99 -------------------------------------------------------------------------------- 98 (169)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhcCCC
Q 006173 348 HEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPN 414 (658)
Q Consensus 348 ~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~ 414 (658)
+|.+|+||||+|+..|+.+++++|++++ .+ ++.+|.+|+||||+|+.+|+.+++++|++.|+
T Consensus 99 ---~d~~G~TpLh~A~~~g~~~~v~~Ll~~g-ad-~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA 160 (169)
T 4gpm_A 99 ---KDSDGRTPLHHAAENGHKEVVKLLISKG-AD-VNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160 (169)
T ss_dssp ---CCTTSCCHHHHHHHTTCHHHHHHHHHTT-CC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC--
T ss_pred ---CCCCCCCHHHHHHHcCCHHHHHHHHHcC-CC-ccccCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 3456889999999999999999999998 65 56789999999999999999999999999998
No 55
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=1.1e-27 Score=241.59 Aligned_cols=195 Identities=13% Similarity=0.173 Sum_probs=165.0
Q ss_pred CCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCc
Q 006173 68 DQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIK 147 (658)
Q Consensus 68 ~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~ 147 (658)
..+++++| .|+..|+.+.++.+++.+....++.. |.+|+||||+||..|+.++|++|++.++...+..+.
T Consensus 74 ~~~~~~l~-~a~~~~~~~~~~~l~~~~~~~~~n~~-d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~-------- 143 (276)
T 4hbd_A 74 LACRSDAH-PELVRRHLVTFRAMSARLLDYVVNIA-DSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNR-------- 143 (276)
T ss_dssp HHHSTTCC-HHHHHHHHHHHHHHCHHHHHHHHTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCT--------
T ss_pred HHhccCCC-HHHHHHHHHHHHHHHHHHHhhcCcCC-CCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCC--------
Confidence 34578999 99999999999999987544457888 999999999999999999999999999844566666
Q ss_pred ccCCCCCcHHHHHH-----HhCcHHHHHHhccCCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCc
Q 006173 148 DEEKDDLLPVHMAA-----KAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGK 221 (658)
Q Consensus 148 ~~~~~G~TpLh~Aa-----~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~T 221 (658)
. |.||||+|+ ..++.+++++|++.+.. ...+..|.||||+|+..|+.++++.|++.+.+. +
T Consensus 144 ---~-g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~-n-------- 210 (276)
T 4hbd_A 144 ---A-GYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADV-N-------- 210 (276)
T ss_dssp ---T-SCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-T--------
T ss_pred ---C-CCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-C--------
Confidence 6 999999999 67889999999999984 567788999999999999999999999874332 1
Q ss_pred HhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHH
Q 006173 222 ILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQK 301 (658)
Q Consensus 222 pLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (658)
T Consensus 211 -------------------------------------------------------------------------------- 210 (276)
T 4hbd_A 211 -------------------------------------------------------------------------------- 210 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhhcchhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCC
Q 006173 302 LKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDILNTHEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPW 381 (658)
Q Consensus 302 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~ 381 (658)
.+|..|+||||+|+..|+.+++++|++.. ..
T Consensus 211 ------------------------------------------------~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~-ga 241 (276)
T 4hbd_A 211 ------------------------------------------------VQDDDGSTALMCACEHGHKEIAGLLLAVP-SC 241 (276)
T ss_dssp ------------------------------------------------CCCTTSCCHHHHHHHHTCHHHHHHHHTST-TC
T ss_pred ------------------------------------------------CCCCCCCCHHHHHHHCCCHHHHHHHHhcC-CC
Confidence 13456889999999999999999999943 34
Q ss_pred cccccccCCChHHHHHHHhCCHhHHHHHhcCCC
Q 006173 382 SLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPN 414 (658)
Q Consensus 382 ~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~ 414 (658)
.++.+|.+|+||||+|+.+|+.+++++|+++..
T Consensus 242 d~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 242 DISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred CCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 567789999999999999999999999998743
No 56
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.94 E-value=8.7e-28 Score=240.12 Aligned_cols=206 Identities=14% Similarity=0.066 Sum_probs=160.1
Q ss_pred hhhhHHHHHHHHhCCHHHHHHHHhh---cCccccccc---ccCCCCcHHHHhhh---cCCChHHHHHHHhcCCc------
Q 006173 32 IDSYKQVTRYILENDWKGLEDYIMS---KTPNALTCI---IVDQSSIFEFIVGI---PDVPATLVDKLLSKVPR------ 96 (658)
Q Consensus 32 ~~~~~~L~~A~~~G~~~~v~~ll~~---~~~~~~~~~---~~~~g~T~Lh~~Aa---~~g~~~iv~~Ll~~~~~------ 96 (658)
..+.++||.||+.|+.+.++.++ + ..+..++.. .+.+|+|||| .|+ ..|+.++|++|++.+..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll-~~l~~~~~~~~~~~~~~~~~g~t~L~-~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~ 80 (260)
T 3jxi_A 3 VFNRPILFDIVSRGSPDGLEGLL-SFLLTHKKRLTDEEFREPSTGKTCLP-KALLNLSAGRNDTIPILLDIAEKTGNMRE 80 (260)
T ss_dssp CCCHHHHHHHHHHTCGGGGTTHH-HHHHHHTCCTTSGGGSCTTTCCCHHH-HHHTSCBTTBCTHHHHHHHHHHHTTCHHH
T ss_pred cchHHHHHHHHHhCCHHHHHHHH-HHHHhcCCCcchhhhhccCCCCcHHH-HHHHHhhcCCHHHHHHHHHhcccccchHh
Confidence 34679999999999999887777 4 233333322 2477999999 999 78999999999998521
Q ss_pred ---cccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccC---CCCCCCcccCCCCCcHHHHHHHhCcHHHHH
Q 006173 97 ---NCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEK---KDDPNIKDEEKDDLLPVHMAAKAGKRDAVR 170 (658)
Q Consensus 97 ---~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~---~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~ 170 (658)
..++.. |..|+||||+||..|+.++|++|++.++++....... ..|.+..+. . |+||||+|+..|+.++|+
T Consensus 81 ~~~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~-~-g~tpL~~A~~~g~~~~v~ 157 (260)
T 3jxi_A 81 FINSPFRDV-YYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFY-F-GELPLSLAACTNQPHIVH 157 (260)
T ss_dssp HHTCCBCCS-SEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCC-S-CSSHHHHHHHTTCHHHHH
T ss_pred hhccccccc-ccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCccccccccc-C-CCCHHHHHHHcCCHHHHH
Confidence 124455 6699999999999999999999999998864433210 001111111 5 999999999999999999
Q ss_pred Hhcc---CCCC-CCCCCcchhHHHHHHhcCc---------HHHHHHHHHhCCCcc------ccccCCCCcHhHHHhcCCC
Q 006173 171 HLLP---KTRE-PLDGRQGFVLLKFLIDSNL---------FDMALALLKCHPMIA------RADIGETGKILESLSKRPK 231 (658)
Q Consensus 171 ~Ll~---~~~~-~~~~~~g~t~Lh~A~~~g~---------~~iv~~LL~~~~~~~------~~~d~~g~TpLh~Aa~~~~ 231 (658)
+|++ ++++ +.+|..|.||||+|+..++ .++++.|++++.+.. +.+|.+|.||||+|++.+
T Consensus 158 ~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g- 236 (260)
T 3jxi_A 158 YLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTG- 236 (260)
T ss_dssp HHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTT-
T ss_pred HHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcC-
Confidence 9999 7775 6889999999999998887 799999999855432 678999999999999996
Q ss_pred CCCCCCCcchhhhhhccc
Q 006173 232 AFASGSRLGSWKRLLYQW 249 (658)
Q Consensus 232 ~~~s~~~l~~~~~~i~~~ 249 (658)
+.++++.++...
T Consensus 237 ------~~~~v~~Ll~~g 248 (260)
T 3jxi_A 237 ------KIGIFQHIIRRE 248 (260)
T ss_dssp ------CHHHHHHHHHHH
T ss_pred ------CHHHHHHHHHhC
Confidence 346777776554
No 57
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.94 E-value=1e-26 Score=216.81 Aligned_cols=168 Identities=11% Similarity=0.069 Sum_probs=141.9
Q ss_pred hHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHH
Q 006173 35 YKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYA 114 (658)
Q Consensus 35 ~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~A 114 (658)
.+|||.||..|+.+.++.++ +..+..++.+ +..|+|||| .|+..|+.++|++|++.+ .+ ++.. |..|.||||+|
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll-~~~~~~~~~~-~~~g~t~L~-~A~~~~~~~~v~~Ll~~g-~~-~~~~-~~~g~t~L~~A 76 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHL-RKGDNLVNKP-DERGFTPLI-WASAFGEIETVRFLLEWG-AD-PHIL-AKERESALSLA 76 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHH-TTCSGGGGCC-CTTSCCHHH-HHHHTTCHHHHHHHHHHT-CC-TTCC-CTTCCCHHHHH
T ss_pred hhhHHHHHHcCCHHHHHHHH-HcCcccccCC-CCCCCCHHH-HHHHcCCHHHHHHHHHcC-CC-chhh-cccCCCHHHHH
Confidence 47899999999999999999 6655545544 889999999 999999999999999994 33 7788 99999999999
Q ss_pred HhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHHH
Q 006173 115 VSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLI 193 (658)
Q Consensus 115 a~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~ 193 (658)
+..|+.+++++|++.++++ +..+. . |+||||+|+..|+.+++++|++++++ ..+|..|.||||+|+
T Consensus 77 ~~~~~~~~v~~Ll~~g~~~-~~~~~-----------~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 143 (172)
T 3v30_A 77 STGGYTDIVGLLLERDVDI-NIYDW-----------N-GGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAV 143 (172)
T ss_dssp HHTTCHHHHHHHHTTTCCT-TCCCT-----------T-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred HHCCCHHHHHHHHHcCCCC-CCCCC-----------C-CCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 9999999999999998885 44455 6 99999999999999999999999985 678999999999999
Q ss_pred hcCcHHHHHHHHHhCCCccccccCCCCcH
Q 006173 194 DSNLFDMALALLKCHPMIARADIGETGKI 222 (658)
Q Consensus 194 ~~g~~~iv~~LL~~~~~~~~~~d~~g~Tp 222 (658)
..|+.++++.|+++..+. ..++..|.||
T Consensus 144 ~~~~~~~~~~L~~~~~~~-~~~~~~~~~p 171 (172)
T 3v30_A 144 ALGYRKVQQVIENHILKL-FQSNLVPADP 171 (172)
T ss_dssp HHTCHHHHHHHHHHHHHH-SCC-------
T ss_pred HhCcHHHHHHHHHHHHHH-hcccCCCCCC
Confidence 999999999999986543 4556666665
No 58
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.94 E-value=6.7e-28 Score=252.24 Aligned_cols=174 Identities=9% Similarity=0.019 Sum_probs=136.2
Q ss_pred hhhhhhHHHHHHHHhCCHHHHHHHHhhcCc-ccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCcc-ccccccCCCC
Q 006173 30 KDIDSYKQVTRYILENDWKGLEDYIMSKTP-NALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRN-CLQNFARDEG 107 (658)
Q Consensus 30 ~~~~~~~~L~~A~~~G~~~~v~~ll~~~~~-~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~-~l~~~~d~~G 107 (658)
.+.+..||||.||+.|+.+.++.|+ +... ......++..|.|||| .||..|+.++|++|++++... ..+.. +.+
T Consensus 88 ~g~~~~T~Lh~Aa~~G~~e~v~~Ll-~~ga~~~~~~~~~~~~~tpL~-~Aa~~G~~eiv~~Ll~~gad~~~~~i~-~~~- 163 (376)
T 2aja_A 88 KGIKSEVICFVAAITGCSSALDTLC-LLLTSDEIVKVIQAENYQAFR-LAAENGHLHVLNRLCELAPTEIMAMIQ-AEN- 163 (376)
T ss_dssp HTCCHHHHHHHHHHHCCHHHHHHHT-TC--CCSSCC--CHHHHHHHH-HHHHTTCHHHHHHHHHSCTTTHHHHHS-HHH-
T ss_pred cCCCcCCHHHHHHHcCCHHHHHHHH-HcCCcHHHHHHhccCCCCHHH-HHHHcCCHHHHHHHHhCCCCccccccC-CCC-
Confidence 3445679999999999999999999 4432 1122233567899999 999999999999999996321 01222 223
Q ss_pred ChHHHHHHhcCCHHHHHHHHhcCCCCCc-ccccCCCCCCCcccCCCCCcHHHHHH-HhCcHHHHHHhccCCCCCCCCCcc
Q 006173 108 SEYMEYAVSTGKLNLITTLMGYNEELPN-IKVEKKDDPNIKDEEKDDLLPVHMAA-KAGKRDAVRHLLPKTREPLDGRQG 185 (658)
Q Consensus 108 ~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~-~~~~~~~d~~~~~~~~~G~TpLh~Aa-~~g~~~iv~~Ll~~~~~~~~~~~g 185 (658)
.||||+||..|+.++|++|+++++++.. ..+. . |.||||+|| ..|+.++|++|+++++ .|
T Consensus 164 ~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~-----------~-g~TpL~~Aa~~~G~~eiv~~Ll~~ga------~~ 225 (376)
T 2aja_A 164 YHAFRLAAENGHLHVLNRLCELAPTEATAMIQA-----------E-NYYAFRWAAVGRGHHNVINFLLDCPV------ML 225 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHH-----------H-HHHHHHHHHSTTCCHHHHHHHTTSHH------HH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCccchhccCC-----------C-CCCHHHHHHHHCCCHHHHHHHHhCCC------cc
Confidence 9999999999999999999999988643 2455 5 999999999 9999999999999764 48
Q ss_pred hhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCC
Q 006173 186 FVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILESLSKRP 230 (658)
Q Consensus 186 ~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~ 230 (658)
.||||+|+..|+.+++++|++++.+. +.+ .++++.|+..|
T Consensus 226 ~taL~~Aa~~g~~evv~lL~~~ga~~-~~~----~~~l~~A~~~g 265 (376)
T 2aja_A 226 AYAEIHEFEYGEKYVNPFIARHVNRL-KEM----HDAFKLSNPDG 265 (376)
T ss_dssp HHHHHCTTTTTTTTHHHHHHHHHHHH-HHH----HTTTTTTSSSS
T ss_pred chHHHHHHHCCCHHHHHHHHhcCccc-ccc----cHHHHHHHHCC
Confidence 99999999999999999999985443 222 24788887775
No 59
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=7.4e-28 Score=235.58 Aligned_cols=200 Identities=14% Similarity=0.051 Sum_probs=129.4
Q ss_pred HHHHhcCC-ccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcH
Q 006173 88 DKLLSKVP-RNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKR 166 (658)
Q Consensus 88 ~~Ll~~~~-~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~ 166 (658)
+.|++.+. ++..+.. +..|.||||+||..|+.+++++|++.++++ +..+. . |+||||+||..|+.
T Consensus 2 ~~ll~~~~~~~~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~-----------~-g~tpLh~A~~~g~~ 67 (229)
T 2vge_A 2 RSVLRKAGSPRKARRA-RLNPLVLLLDAALTGELEVVQQAVKEMNDP-SQPNE-----------E-GITALHNAICGANY 67 (229)
T ss_dssp --------CCCCCCCT-TSCHHHHHHHHHHHTCHHHHHHHHHHSSCT-TCCCT-----------T-SCCHHHHHHHTTCH
T ss_pred eehhccCCCCcccccc-ccchhHHHHHHHHcCCHHHHHHHHhcCCCC-CCCCC-----------C-CCCHHHHHHHcCCH
Confidence 44555542 2223333 556667777777777777777777776654 33444 4 77777777777777
Q ss_pred HHHHHhccCCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhh
Q 006173 167 DAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKRL 245 (658)
Q Consensus 167 ~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~ 245 (658)
+++++|++++++ +..|..|.||||+|+..|+.+++++|++.+.+.....+.
T Consensus 68 ~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~---------------------------- 119 (229)
T 2vge_A 68 SIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLS---------------------------- 119 (229)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSS----------------------------
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCC----------------------------
Confidence 777777777764 456667777777777777777777777664433111112
Q ss_pred hcccccccccCCCCCCCCCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHhhh
Q 006173 246 LYQWIPIQEEYNPHPHPPSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAKI 325 (658)
Q Consensus 246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 325 (658)
T Consensus 120 -------------------------------------------------------------------------------- 119 (229)
T 2vge_A 120 -------------------------------------------------------------------------------- 119 (229)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHHHhhhhhhcchhhhhcCCCcHHHHH--HHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCH
Q 006173 326 IHEQTLEILRIMCAGAVDILNTHEEAQNVFKKPMFKA--ARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRRE 403 (658)
Q Consensus 326 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~g~tpLh~A--a~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~ 403 (658)
.|+||||+| +..|+.+++++|++.+ ++ ++.+|..|.||+|.++....
T Consensus 120 ----------------------------~g~tpL~~A~a~~~~~~~~v~~Ll~~g-a~-~~~~~~~~~~~l~~~~~~~~- 168 (229)
T 2vge_A 120 ----------------------------DGATAFEKCDPYREGYADCATYLADVE-QS-MGLMNSGAVYALWDYSAEFG- 168 (229)
T ss_dssp ----------------------------TTCCTGGGCCTTSTTHHHHHHHHHHHH-HH-TTTSGGGEEEESSCBCCSST-
T ss_pred ----------------------------CCCCHHHHHHHHhcChHHHHHHHHHcC-CC-cccccCCchHHHHHHhhccc-
Confidence 345555555 5667778888888888 54 55568888888886554433
Q ss_pred hHHHHHhcCCCcccccccccccCCCchhhhHhhcCCCCCCC
Q 006173 404 KVFNIIFNFPNIYPFFMANIDEKRINILHIAAMSVPSTEVP 444 (658)
Q Consensus 404 ~iv~~Ll~~~~~~~~~in~~D~~G~TpLHlAa~~g~~~~v~ 444 (658)
.++|++.|++ ..++.+|.+|+||||+|++.|+.+.+.
T Consensus 169 --~~~ll~~ga~--~~~~~~d~~G~TpL~~A~~~g~~~~v~ 205 (229)
T 2vge_A 169 --DELSFREGES--VTVLRRDGPEETDWWWAALHGQEGYVP 205 (229)
T ss_dssp --TBCCBCTTCE--EEEEESSCTTCSSEEEEEETTEEEEEE
T ss_pred --cccCcccccc--ccccccCCCcccHHHHHHHcCCcceee
Confidence 3577788762 247899999999999999999875553
No 60
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.93 E-value=1.2e-25 Score=207.16 Aligned_cols=155 Identities=16% Similarity=0.132 Sum_probs=137.6
Q ss_pred hhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHH
Q 006173 34 SYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEY 113 (658)
Q Consensus 34 ~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~ 113 (658)
..+|||.|+..|+.+.++.++ + .+..++.+ +..|+|||| .|+. |+.+++++|++.+ .+ ++.+ |..|.||||+
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll-~-~~~~~~~~-~~~g~t~L~-~A~~-~~~~~v~~Ll~~g-~~-~~~~-~~~g~t~L~~ 76 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLL-Q-NNVNVNAQ-NGFGRTALQ-VMKL-GNPEIARRLLLRG-AN-PDLK-DRTGFAVIHD 76 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHT-T-SCCCTTCC-CTTSCCHHH-HCCS-SCHHHHHHHHHTT-CC-TTCC-CTTSCCHHHH
T ss_pred HhhHHHHHHHcCCHHHHHHHH-h-CCCCcccc-CccCccHHH-HHHc-CcHHHHHHHHHcC-CC-CCCC-CCCCCCHHHH
Confidence 458999999999999999999 4 44445444 889999999 9999 9999999999994 33 7788 9999999999
Q ss_pred HHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC--CCCCCcchhHHHH
Q 006173 114 AVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE--PLDGRQGFVLLKF 191 (658)
Q Consensus 114 Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~--~~~~~~g~t~Lh~ 191 (658)
|+..|+.+++++|++.++++ +..+. . |.||||+|+..|+.+++++|++++++ ...+..|.||||+
T Consensus 77 A~~~~~~~~v~~Ll~~g~~~-~~~~~-----------~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~ 143 (162)
T 1ihb_A 77 AARAGFLDTLQTLLEFQADV-NIEDN-----------E-GNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDL 143 (162)
T ss_dssp HHHHTCHHHHHHHHHTTCCT-TCCCT-----------T-SCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCC-CCcCC-----------C-CCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHH
Confidence 99999999999999998875 44555 6 99999999999999999999999985 6889999999999
Q ss_pred HHhcCcHHHHHHHHHhCC
Q 006173 192 LIDSNLFDMALALLKCHP 209 (658)
Q Consensus 192 A~~~g~~~iv~~LL~~~~ 209 (658)
|+..|+.+++++|++++.
T Consensus 144 A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 144 ARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp HHHTTCHHHHHHHHHTC-
T ss_pred HHHcCCHHHHHHHHHhCC
Confidence 999999999999999864
No 61
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.93 E-value=4.7e-26 Score=212.38 Aligned_cols=169 Identities=18% Similarity=0.138 Sum_probs=137.1
Q ss_pred CChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcc
Q 006173 107 GSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQG 185 (658)
Q Consensus 107 G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g 185 (658)
+.||||.||..|+.++++.|++.++...+..+. . |+||||+|+..|+.+++++|++++++ ...+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~-----------~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 69 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDE-----------R-GFTPLIWASAFGEIETVRFLLEWGADPHILAKER 69 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCT-----------T-SCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCC-----------C-CCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccC
Confidence 468999999999999999999998875566666 6 99999999999999999999999885 5778899
Q ss_pred hhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCCCCC
Q 006173 186 FVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHPPSE 265 (658)
Q Consensus 186 ~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~ 265 (658)
.||||+|+..|+.++++.|++++.+. +
T Consensus 70 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-~---------------------------------------------------- 96 (172)
T 3v30_A 70 ESALSLASTGGYTDIVGLLLERDVDI-N---------------------------------------------------- 96 (172)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCT-T----------------------------------------------------
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCC-C----------------------------------------------------
Confidence 99999999999999999998764321 1
Q ss_pred CCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhhhhh
Q 006173 266 NVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAVDIL 345 (658)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ 345 (658)
T Consensus 97 -------------------------------------------------------------------------------- 96 (172)
T 3v30_A 97 -------------------------------------------------------------------------------- 96 (172)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cchhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhcCCCccccccccccc
Q 006173 346 NTHEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPNIYPFFMANIDE 425 (658)
Q Consensus 346 ~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~in~~D~ 425 (658)
.+|..|+||||+|+..|+.+++++|++++ .+ ++.+|..|+||||+|+..++.+++++|++.++ .+..++.
T Consensus 97 ----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~----~~~~~~~ 166 (172)
T 3v30_A 97 ----IYDWNGGTPLLYAVRGNHVKCVEALLARG-AD-LTTEADSGYTPMDLAVALGYRKVQQVIENHIL----KLFQSNL 166 (172)
T ss_dssp ----CCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH----HHSCC--
T ss_pred ----CCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CC-ccccCCCCCCHHHHHHHhCcHHHHHHHHHHHH----HHhcccC
Confidence 13445889999999999999999999998 65 56678999999999999999999999999977 6678888
Q ss_pred CCCch
Q 006173 426 KRINI 430 (658)
Q Consensus 426 ~G~Tp 430 (658)
.|.||
T Consensus 167 ~~~~p 171 (172)
T 3v30_A 167 VPADP 171 (172)
T ss_dssp -----
T ss_pred CCCCC
Confidence 88887
No 62
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=2.6e-25 Score=203.72 Aligned_cols=154 Identities=14% Similarity=0.154 Sum_probs=135.8
Q ss_pred hhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHH
Q 006173 34 SYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEY 113 (658)
Q Consensus 34 ~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~ 113 (658)
+.+|||.|+..|+.+.++.++ +..+...+.. +..|+|||| . |..|+.+++++|++.+ .+ ++.. |..|.||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll-~~~~~~~~~~-~~~g~t~L~-~-~~~~~~~~v~~Ll~~g-~~-~~~~-~~~g~t~L~~ 74 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLL-HRELVHPDAL-NRFGKTALQ-V-MMFGSTAIALELLKQG-AS-PNVQ-DTSGTSPVHD 74 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHH-HTTCCCTTCC-CTTSCCHHH-H-SCTTCHHHHHHHHHTT-CC-TTCC-CTTSCCHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHH-HhhCcCcccc-CCCCCcHHH-H-HHcCCHHHHHHHHHCC-CC-CCCc-CCCCCCHHHH
Confidence 468999999999999999999 5533345444 889999999 8 9999999999999994 33 7788 9999999999
Q ss_pred HHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCCCCCCCcchhHHHHHH
Q 006173 114 AVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTREPLDGRQGFVLLKFLI 193 (658)
Q Consensus 114 Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~g~t~Lh~A~ 193 (658)
|+..|+.+++++|++.++++ +..+. . |+||||+|+..|+.+++++|+++.....+|..|.||||+|+
T Consensus 75 A~~~~~~~~v~~Ll~~g~~~-~~~~~-----------~-g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~g~t~l~~A~ 141 (156)
T 1bd8_A 75 AARTGFLDTLKVLVEHGADV-NVPDG-----------T-GALPIHLAVQEGHTAVVSFLAAESDLHRRDARGLTPLELAL 141 (156)
T ss_dssp HHHTTCHHHHHHHHHTTCCS-CCCCT-----------T-SCCHHHHHHHHTCHHHHHHHHTTSCTTCCCTTSCCHHHHHH
T ss_pred HHHcCcHHHHHHHHHcCCCC-CCcCC-----------C-CCcHHHHHHHhChHHHHHHHHhccCCCCcCCCCCCHHHHHH
Confidence 99999999999999998875 44555 6 99999999999999999999999334788999999999999
Q ss_pred hcCcHHHHHHHHHh
Q 006173 194 DSNLFDMALALLKC 207 (658)
Q Consensus 194 ~~g~~~iv~~LL~~ 207 (658)
..|+.++++.|+++
T Consensus 142 ~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 142 QRGAQDLVDILQGH 155 (156)
T ss_dssp HSCCHHHHHHHHTT
T ss_pred HcCcHHHHHHHHhh
Confidence 99999999999975
No 63
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.93 E-value=2.3e-25 Score=207.13 Aligned_cols=157 Identities=17% Similarity=0.153 Sum_probs=138.8
Q ss_pred hhhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChH
Q 006173 31 DIDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEY 110 (658)
Q Consensus 31 ~~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~Tp 110 (658)
.....++|+.||+.|+.+.++.|+ +. +..++.+ +.+|.|||| .|+..|+.++|++|++.+ .+ ++.. |..|.||
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll-~~-g~~~~~~-~~~g~t~L~-~A~~~~~~~~v~~Ll~~g-~~-~~~~-~~~g~t~ 83 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILM-AN-GADVNAE-DASGWTPLH-LAAFNGHLEIVEVLLKNG-AD-VNAV-DHAGMTP 83 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHH-HT-TCCTTCC-CTTSCCHHH-HHHHTTCHHHHHHHHHTT-CC-TTCC-CTTSCCH
T ss_pred CCcccchHHHHHHcCCHHHHHHHH-HC-CCCCCCC-CCCCCCHHH-HHHHcCCHHHHHHHHHcC-CC-CCcc-CCCCCCH
Confidence 345779999999999999999999 44 4445544 889999999 999999999999999994 33 7788 9999999
Q ss_pred HHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHH
Q 006173 111 MEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLL 189 (658)
Q Consensus 111 Lh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~L 189 (658)
||+|+..|+.+++++|++.++++ +..+. . |.||||+|+..|+.+++++|++++++ ..+|..|.|||
T Consensus 84 L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~-----------~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 150 (169)
T 2y1l_E 84 LRLAALFGHLEIVEVLLKNGADV-NANDM-----------E-GHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAF 150 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCT-TCCCT-----------T-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC-CCCCC-----------C-CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 99999999999999999998886 44455 6 99999999999999999999999986 67899999999
Q ss_pred HHHHhcCcHHHHHHHHHh
Q 006173 190 KFLIDSNLFDMALALLKC 207 (658)
Q Consensus 190 h~A~~~g~~~iv~~LL~~ 207 (658)
|+|+..|+.+++++|++.
T Consensus 151 ~~A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 151 DISIDNGNEDLAEILQKL 168 (169)
T ss_dssp HHHHHTTCHHHHHHHHTC
T ss_pred HHHHHhCCHHHHHHHHHc
Confidence 999999999999999875
No 64
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.93 E-value=8e-26 Score=209.68 Aligned_cols=158 Identities=12% Similarity=0.117 Sum_probs=140.1
Q ss_pred hhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHH
Q 006173 34 SYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEY 113 (658)
Q Consensus 34 ~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~ 113 (658)
+.+|||.|+..|+.+.++.++ +. +..++.+ +.+|+|||| .|+..|+.++|++|++.+ .+ ++.. |..|.||||+
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll-~~-~~~~~~~-~~~g~t~L~-~A~~~~~~~~v~~Ll~~g-~~-~~~~-~~~g~t~L~~ 75 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRI-EQ-ENVINHT-DEEGFTPLM-WAAAHGQIAVVEFLLQNG-AD-PQLL-GKGRESALSL 75 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHH-HH-SSCTTCC-CTTSCCHHH-HHHHTTCHHHHHHHHHTT-CC-TTCC-CTTCCCHHHH
T ss_pred CcchHHHHHHCCCHHHHHHHH-Hc-CCCcCCC-CCCCCCHHH-HHHHCCCHHHHHHHHHcC-CC-CCCc-CCCCCcHHHH
Confidence 468999999999999999999 54 3445544 889999999 999999999999999994 33 7778 9999999999
Q ss_pred HHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHH
Q 006173 114 AVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFL 192 (658)
Q Consensus 114 Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A 192 (658)
|+..|+.+++++|++.++++ +..+. . |.||||+|+..|+.+++++|++++++ ..+|..|.||||+|
T Consensus 76 A~~~~~~~~v~~Ll~~g~~~-~~~~~-----------~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A 142 (167)
T 3v31_A 76 ACSKGYTDIVKMLLDCGVDV-NEYDW-----------N-GGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLA 142 (167)
T ss_dssp HHHHTCHHHHHHHHHHTCCT-TCCCT-----------T-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCC-CcCCC-----------C-CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 99999999999999998886 44455 6 99999999999999999999999986 67899999999999
Q ss_pred HhcCcHHHHHHHHHhCCCc
Q 006173 193 IDSNLFDMALALLKCHPMI 211 (658)
Q Consensus 193 ~~~g~~~iv~~LL~~~~~~ 211 (658)
+..|+.++++.|+++...+
T Consensus 143 ~~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 143 VALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp HHHTCHHHHHHHHHHHHHH
T ss_pred HHcCcHHHHHHHHHHHHHH
Confidence 9999999999999886543
No 65
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.93 E-value=1.8e-25 Score=206.06 Aligned_cols=61 Identities=18% Similarity=0.163 Sum_probs=47.9
Q ss_pred cCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhcCCC
Q 006173 353 NVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPN 414 (658)
Q Consensus 353 ~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~ 414 (658)
..|+||||+|+..|+.+++++|++++ ++.++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 101 ~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 101 NEGNLPLHLAAKEGHLRVVEFLVKHT-ASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHS-CCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcc-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence 34677888888888888888888888 77667778888888888888888888888888776
No 66
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.93 E-value=1.5e-25 Score=212.93 Aligned_cols=158 Identities=13% Similarity=0.088 Sum_probs=134.6
Q ss_pred hhhhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCCh
Q 006173 30 KDIDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSE 109 (658)
Q Consensus 30 ~~~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~T 109 (658)
.+..+.||||.|+..|+.+.++.++ +. +..++.+ +..|+|||| .|+..|+.++|++|++.+ .+ ++.. |..|.|
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll-~~-~~~~~~~-~~~g~t~L~-~A~~~~~~~~v~~Ll~~g-~~-~~~~-~~~g~t 103 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLV-EN-FDKLEDK-DIEGSTALI-WAVKNNRLGIAEKLLSKG-SN-VNTK-DFSGKT 103 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHH-HH-HCCTTCC-CTTSCCHHH-HHHHTTCHHHHHHHHHHT-CC-TTCC-CTTSCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHH-Hh-ccccccc-cccCccHHH-HHHHcCCHHHHHHHHHCC-CC-CCCC-CCCCCc
Confidence 4556889999999999999999999 43 3444444 778999999 999999999999999984 33 7777 899999
Q ss_pred HHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhH
Q 006173 110 YMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVL 188 (658)
Q Consensus 110 pLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~ 188 (658)
|||+|+..|+.+++++|++.++++ +..+. . |.||||+|+..|+.+++++|++++++ ..+|..|.||
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-----------~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~ 170 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLEHGANV-NDRNL-----------E-GETPLIVASKYGRSEIVKKLLELGADISARDLTGLTA 170 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCS-SCCCT-----------T-CCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCC-CCCCC-----------C-CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCH
Confidence 999999999999999999988875 44444 5 99999999999999999999999885 5788999999
Q ss_pred HHHHHhcCcHHHHHHHHHh
Q 006173 189 LKFLIDSNLFDMALALLKC 207 (658)
Q Consensus 189 Lh~A~~~g~~~iv~~LL~~ 207 (658)
||+|+..|+.+++++|++.
T Consensus 171 l~~A~~~~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 171 EASARIFGRQEVIKIFTEV 189 (192)
T ss_dssp HHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHhCcHHHHHHHHhc
Confidence 9999999999999999876
No 67
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.93 E-value=1.9e-25 Score=206.64 Aligned_cols=158 Identities=17% Similarity=0.138 Sum_probs=137.9
Q ss_pred hhhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChH
Q 006173 31 DIDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEY 110 (658)
Q Consensus 31 ~~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~Tp 110 (658)
+.++.+|||.|+..|+.+.++.++ +..+...+. .+..|.|||| .|+..|+.++|++|++.+ .+ ++.. |..|.||
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll-~~~~~~~~~-~~~~g~t~L~-~A~~~~~~~~v~~Ll~~g-~~-~~~~-~~~g~t~ 78 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLC-TVQSVNCRD-IEGRQSTPLH-FAAGYNRVSVVEYLLQHG-AD-VHAK-DKGGLVP 78 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHC-CTTTTTCCC-TTTTCCCHHH-HHHHTTCHHHHHHHHHTT-CC-TTCC-CTTSCCH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHH-HcCCCCccc-cccCCCCHHH-HHHHcChHHHHHHHHhcC-CC-CCcc-CCCCCCH
Confidence 456789999999999999999999 555544443 3778899999 999999999999999994 33 7788 9999999
Q ss_pred HHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHH
Q 006173 111 MEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLL 189 (658)
Q Consensus 111 Lh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~L 189 (658)
||+|+..|+.+++++|++.++++ +..+. . |+||||+|+..|+.+++++|++++++ ..+|..|.|||
T Consensus 79 L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-----------~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 145 (165)
T 3twr_A 79 LHNACSYGHYEVAELLVKHGAVV-NVADL-----------W-KFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPL 145 (165)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCT-TCCCT-----------T-CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTG
T ss_pred HHHHHHcCcHHHHHHHHhCCCCC-CCcCC-----------C-CCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChh
Confidence 99999999999999999998885 44455 6 99999999999999999999999985 67899999999
Q ss_pred HHHHhcCcHHHHHHHHHhC
Q 006173 190 KFLIDSNLFDMALALLKCH 208 (658)
Q Consensus 190 h~A~~~g~~~iv~~LL~~~ 208 (658)
|+|+. |+.+++++|+++.
T Consensus 146 ~~a~~-~~~~i~~~L~~~g 163 (165)
T 3twr_A 146 DLVKD-GDTDIQDLLRGDA 163 (165)
T ss_dssp GGSCT-TCHHHHHHHHTC-
T ss_pred HhHhc-CChHHHHHHhhcc
Confidence 99877 8899999998763
No 68
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=5.3e-25 Score=201.03 Aligned_cols=150 Identities=13% Similarity=0.065 Sum_probs=132.9
Q ss_pred hhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHH
Q 006173 34 SYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEY 113 (658)
Q Consensus 34 ~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~ 113 (658)
..++|+.|+..|+.+.++.++ +.... .+ .+..|.|||| .|+..|+.+++++|++.+ .+ ++.. |..|.||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll-~~g~~-~~--~~~~g~t~L~-~A~~~~~~~~v~~Ll~~g-~~-~~~~-~~~g~t~L~~ 73 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILM-ANGAP-FT--TDWLGTSPLH-LAAQYGHFSTTEVLLRAG-VS-RDAR-TKVDRTPLHM 73 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHH-HHTCC-CC--CCTTCCCHHH-HHHHHTCHHHHHHHHTTT-CC-TTCC-CTTCCCHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHH-HcCCC-CC--cCCCCCCHHH-HHHHcCCHHHHHHHHHcC-CC-CCCC-CCCCCCHHHH
Confidence 358999999999999999999 55443 22 3788999999 999999999999999984 33 7778 9999999999
Q ss_pred HHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHH
Q 006173 114 AVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFL 192 (658)
Q Consensus 114 Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A 192 (658)
|+..|+.+++++|++.++++ +..+. . |+||||+|+..|+.+++++|++++++ ..+|..|.||||+|
T Consensus 74 A~~~~~~~~v~~Ll~~g~~~-~~~~~-----------~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 140 (153)
T 1awc_B 74 AASEGHANIVEVLLKHGADV-NAKDM-----------L-KMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDIS 140 (153)
T ss_dssp HHHHTCHHHHHHHHTTTCCT-TCCCT-----------T-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHcChHHHHHHHHHcCCCC-CCCCC-----------C-CCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHH
Confidence 99999999999999998875 44455 6 99999999999999999999999985 67899999999999
Q ss_pred HhcCcHHHHHHH
Q 006173 193 IDSNLFDMALAL 204 (658)
Q Consensus 193 ~~~g~~~iv~~L 204 (658)
+..|+.+++++|
T Consensus 141 ~~~~~~~i~~~L 152 (153)
T 1awc_B 141 IDNGNEDLAEIL 152 (153)
T ss_dssp HHTTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 999999999876
No 69
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.92 E-value=4.5e-25 Score=209.68 Aligned_cols=126 Identities=17% Similarity=0.124 Sum_probs=113.6
Q ss_pred cCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCC
Q 006173 67 VDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNI 146 (658)
Q Consensus 67 ~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~ 146 (658)
|.+|+|||| .||..|+.++|++|++.+ .+ ++.. |..|.||||+|+..|+.+++++|++.++++ +..+.
T Consensus 32 d~~g~t~L~-~A~~~g~~~~v~~Ll~~~-~~-~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~------- 99 (192)
T 2rfm_A 32 DSYNRTPLM-VACMLGMENAIDKLVENF-DK-LEDK-DIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDF------- 99 (192)
T ss_dssp CTTCCCHHH-HHHHHTCGGGHHHHHHHH-CC-TTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCT-------
T ss_pred CCCCCCHHH-HHHHcCCHHHHHHHHHhc-cc-cccc-cccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCC-------
Confidence 889999999 999999999999999984 33 7778 999999999999999999999999998875 44455
Q ss_pred cccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHhCC
Q 006173 147 KDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKCHP 209 (658)
Q Consensus 147 ~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~ 209 (658)
. |.||||+|+..|+.+++++|++++++ ..+|..|.||||+|+..|+.++++.|++.+.
T Consensus 100 ----~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 158 (192)
T 2rfm_A 100 ----S-GKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGA 158 (192)
T ss_dssp ----T-SCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred ----C-CCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 6 99999999999999999999999985 6788999999999999999999999998743
No 70
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.92 E-value=4.6e-26 Score=229.70 Aligned_cols=181 Identities=9% Similarity=0.069 Sum_probs=156.6
Q ss_pred hhHHHHHHHHhCCHHHHHHHHhhcCcc-cccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHH
Q 006173 34 SYKQVTRYILENDWKGLEDYIMSKTPN-ALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYME 112 (658)
Q Consensus 34 ~~~~L~~A~~~G~~~~v~~ll~~~~~~-~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh 112 (658)
..+++|.|+..|+.+.++.++ +...+ .++.+ |.+|+|||| .||..|+.++|++|++.+. .+++.. |..|.||||
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~-~~~~~~~~n~~-d~~g~T~Lh-~A~~~g~~~~v~~Ll~~g~-~~~~~~-~~~g~tpL~ 150 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMS-ARLLDYVVNIA-DSNGNTALH-YSVSHANFPVVQQLLDSGV-CKVDKQ-NRAGYSPIM 150 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHC-HHHHHHHHTCC-CTTSCCHHH-HHHHTTCHHHHHHHHHTSC-CCTTCC-CTTSCCHHH
T ss_pred hccCCCHHHHHHHHHHHHHHH-HHHHhhcCcCC-CCCCCCHHH-HHHHCCCHHHHHHHHHCCC-CcCCCC-CCCCCCHHH
Confidence 446678899999999999988 43222 23333 889999999 9999999999999999953 348888 999999999
Q ss_pred HHH-----hcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcch
Q 006173 113 YAV-----STGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGF 186 (658)
Q Consensus 113 ~Aa-----~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~ 186 (658)
+|+ ..|+.+++++|++.+... ...+. . |+||||+|+..|+.++|++|++++++ +.+|..|.
T Consensus 151 ~a~~~~~~~~~~~~~v~~Ll~~g~~~-~~~~~-----------~-g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~ 217 (276)
T 4hbd_A 151 LTALATLKTQDDIETVLQLFRLGNIN-AKASQ-----------A-GQTALMLAVSHGRVDVVKALLACEADVNVQDDDGS 217 (276)
T ss_dssp HGGGCCCCSHHHHHHHHHHHHHSCTT-CCCTT-----------T-CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred HHHHHHhhhhhhHHHHHHHHHcCCCc-cccCC-----------C-CCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCC
Confidence 999 779999999999999664 44444 5 99999999999999999999999996 67899999
Q ss_pred hHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCC
Q 006173 187 VLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILESLSKRPKA 232 (658)
Q Consensus 187 t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~ 232 (658)
||||+|+..|+.++++.|++..+...+.+|.+|.||||+|+..++.
T Consensus 218 TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~ 263 (276)
T 4hbd_A 218 TALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQS 263 (276)
T ss_dssp CHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred CHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCH
Confidence 9999999999999999999966667788999999999999999643
No 71
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.92 E-value=6.4e-25 Score=203.57 Aligned_cols=122 Identities=14% Similarity=0.145 Sum_probs=82.4
Q ss_pred CCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcc
Q 006173 69 QSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKD 148 (658)
Q Consensus 69 ~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~ 148 (658)
.|+|||| .|+..|+.++|+.|++.+ .+ ++.. |..|.||||+|+..|+.+++++|++.++++ +..+.
T Consensus 2 ~~~t~L~-~A~~~g~~~~v~~ll~~~-~~-~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~--------- 67 (167)
T 3v31_A 2 ANSLSVH-QLAAQGEMLYLATRIEQE-NV-INHT-DEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGK--------- 67 (167)
T ss_dssp TTCCCHH-HHHHTTCHHHHHHHHHHS-SC-TTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT---------
T ss_pred CCcchHH-HHHHCCCHHHHHHHHHcC-CC-cCCC-CCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCC---------
Confidence 4677777 777777777777777773 22 6666 777777777777777777777777776664 33333
Q ss_pred cCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHh
Q 006173 149 EEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKC 207 (658)
Q Consensus 149 ~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~ 207 (658)
. |.||||+|+..|+.+++++|++++++ +..|..|.||||+|+..|+.++++.|+++
T Consensus 68 --~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 124 (167)
T 3v31_A 68 --G-RESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLES 124 (167)
T ss_dssp --T-CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred --C-CCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 4 77777777777777777777776653 44555666666666666666666666654
No 72
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.92 E-value=5.3e-25 Score=206.73 Aligned_cols=159 Identities=13% Similarity=0.111 Sum_probs=141.5
Q ss_pred hhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHH
Q 006173 34 SYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEY 113 (658)
Q Consensus 34 ~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~ 113 (658)
..++||.||..|+.+.++.++ +..+..++.+ +..|+|||| .||..|+.++|++|++.+ .+ ++.. |..|.||||+
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll-~~~~~~~~~~-~~~g~t~L~-~A~~~~~~~~v~~Ll~~g-~~-~~~~-~~~g~t~L~~ 78 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWL-DNTENDLNQG-DDHGFSPLH-WACREGRSAVVEMLIMRG-AR-INVM-NRGDDTPLHL 78 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHH-HCTTSCTTCC-CTTSCCHHH-HHHHTTCHHHHHHHHHTT-CC-TTCC-CTTCCCHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHH-hcCccccccc-CCCCCCHHH-HHHHcCcHHHHHHHHHcC-CC-CCCc-CCCCCCHHHH
Confidence 567899999999999999999 6656656544 889999999 999999999999999994 33 7788 9999999999
Q ss_pred HHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHH
Q 006173 114 AVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFL 192 (658)
Q Consensus 114 Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A 192 (658)
|+..|+.+++++|++.++++ +..+. . |.||||+|+..|+.+++++|++++++ ..+|..|.||||+|
T Consensus 79 A~~~~~~~~v~~Ll~~g~~~-~~~d~-----------~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A 145 (179)
T 3f6q_A 79 AASHGHRDIVQKLLQYKADI-NAVNE-----------H-GNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKA 145 (179)
T ss_dssp HHHTTCHHHHHHHHHTTCCT-TCCCT-----------T-SCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGS
T ss_pred HHHcCCHHHHHHHHHcCCCC-CccCC-----------C-CCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHH
Confidence 99999999999999998886 44455 6 99999999999999999999999996 67899999999999
Q ss_pred HhcCcHHHHHHHHHhCCCc
Q 006173 193 IDSNLFDMALALLKCHPMI 211 (658)
Q Consensus 193 ~~~g~~~iv~~LL~~~~~~ 211 (658)
+..++.++++.|++.+.+.
T Consensus 146 ~~~~~~~~~~~L~~~g~~~ 164 (179)
T 3f6q_A 146 KAPLRELLRERAEKMGQNL 164 (179)
T ss_dssp CHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHhhcCc
Confidence 9999999999999987655
No 73
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.92 E-value=2.3e-24 Score=200.33 Aligned_cols=59 Identities=20% Similarity=0.275 Sum_probs=42.5
Q ss_pred cCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhcCC
Q 006173 353 NVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFP 413 (658)
Q Consensus 353 ~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~ 413 (658)
..|.||||+|+..|+.+++++|++++ .+ ++.+|..|+||||+|+..++.+++++|++.|
T Consensus 111 ~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 111 MEGHTPLHLAAMFGHLEIVEVLLKNG-AD-VNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTT-CC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcC-CC-CCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 34667777777777777777777777 54 4556777778888887777777777777654
No 74
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.91 E-value=1.2e-24 Score=201.25 Aligned_cols=92 Identities=18% Similarity=0.200 Sum_probs=58.1
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCC
Q 006173 104 RDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDG 182 (658)
Q Consensus 104 d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~ 182 (658)
|.+|.||||.|+..|+.++++.|++.++......+. . |.||||+|+..|+.+++++|++++++ +..|
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~-----------~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 72 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEG-----------R-QSTPLHFAAGYNRVSVVEYLLQHGADVHAKD 72 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTT-----------T-CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCcccccc-----------C-CCCHHHHHHHcChHHHHHHHHhcCCCCCccC
Confidence 556666677777667777776666654433333333 4 66677777766666677766666663 4556
Q ss_pred CcchhHHHHHHhcCcHHHHHHHHHh
Q 006173 183 RQGFVLLKFLIDSNLFDMALALLKC 207 (658)
Q Consensus 183 ~~g~t~Lh~A~~~g~~~iv~~LL~~ 207 (658)
..|.||||+|+..|+.+++++|++.
T Consensus 73 ~~g~t~L~~A~~~~~~~~v~~Ll~~ 97 (165)
T 3twr_A 73 KGGLVPLHNACSYGHYEVAELLVKH 97 (165)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHhC
Confidence 6666666666666666666666665
No 75
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.91 E-value=2.1e-24 Score=202.61 Aligned_cols=69 Identities=16% Similarity=0.040 Sum_probs=48.1
Q ss_pred cCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHHHHHhcCCCcccccccccccCC
Q 006173 353 NVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNIIFNFPNIYPFFMANIDEKR 427 (658)
Q Consensus 353 ~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~Ll~~~~~~~~~in~~D~~G 427 (658)
..|.||||+|+..|+.+++++|++++ .+ ++.+|..|+||||+|+..++.+++++|++.|+ .++..+.++
T Consensus 103 ~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~-~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~----~~~~~~~~~ 171 (179)
T 3f6q_A 103 EHGNVPLHYACFWGQDQVAEDLVANG-AL-VSICNKYGEMPVDKAKAPLRELLRERAEKMGQ----NLNRIPYKD 171 (179)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTT-CC-SSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTC----CCSCBCCCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCC-CC-cchhccCCCCcHHHHHHHHHHHHHHHHHHhhc----CcccCCccc
Confidence 34667777777777777777777777 54 45567777777777777777777777777776 445544443
No 76
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.91 E-value=3.1e-26 Score=224.05 Aligned_cols=181 Identities=9% Similarity=-0.023 Sum_probs=152.5
Q ss_pred hhhhhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCC
Q 006173 29 IKDIDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGS 108 (658)
Q Consensus 29 ~~~~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~ 108 (658)
..+..+.+|||.||..|+.+.++.|+ +. +..++.+ +.+|+|||| .||..|+.++|++|++.+ .+ ++.+ |..|+
T Consensus 16 ~~~~~~~t~L~~A~~~g~~~~v~~Ll-~~-g~~~~~~-d~~g~tpLh-~A~~~g~~~~v~~Ll~~g-a~-~n~~-d~~g~ 88 (229)
T 2vge_A 16 RARLNPLVLLLDAALTGELEVVQQAV-KE-MNDPSQP-NEEGITALH-NAICGANYSIVDFLITAG-AN-VNSP-DSHGW 88 (229)
T ss_dssp CTTSCHHHHHHHHHHHTCHHHHHHHH-HH-SSCTTCC-CTTSCCHHH-HHHHTTCHHHHHHHHHTT-CC-TTCC-CTTCC
T ss_pred ccccchhHHHHHHHHcCCHHHHHHHH-hc-CCCCCCC-CCCCCCHHH-HHHHcCCHHHHHHHHHCC-CC-CCCC-CCCCC
Confidence 34567889999999999999999999 54 3345544 889999999 999999999999999994 34 7888 99999
Q ss_pred hHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHH--HHhCcHHHHHHhccCCCC-CCCCCcc
Q 006173 109 EYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMA--AKAGKRDAVRHLLPKTRE-PLDGRQG 185 (658)
Q Consensus 109 TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~A--a~~g~~~iv~~Ll~~~~~-~~~~~~g 185 (658)
||||+||..|+.+++++|++.++++....+. . |+||||+| +..|+.+++++|++++++ +..|..|
T Consensus 89 tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~-----------~-g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~ 156 (229)
T 2vge_A 89 TPLHCAASCNDTVICMALVQHGAAIFATTLS-----------D-GATAFEKCDPYREGYADCATYLADVEQSMGLMNSGA 156 (229)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCTTCCCSS-----------T-TCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGE
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCcccccCC-----------C-CCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCc
Confidence 9999999999999999999999987555555 5 99999999 999999999999999984 6788899
Q ss_pred hhHHHHHHhcCcHHHHHHHHHhCCCc-cccccCCCCcHhHHHhcCCC
Q 006173 186 FVLLKFLIDSNLFDMALALLKCHPMI-ARADIGETGKILESLSKRPK 231 (658)
Q Consensus 186 ~t~Lh~A~~~g~~~iv~~LL~~~~~~-~~~~d~~g~TpLh~Aa~~~~ 231 (658)
.|++|.++..+.. +.|++.+.+. .+.+|.+|.||||+|++.++
T Consensus 157 ~~~l~~~~~~~~~---~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~ 200 (229)
T 2vge_A 157 VYALWDYSAEFGD---ELSFREGESVTVLRRDGPEETDWWWAALHGQ 200 (229)
T ss_dssp EEESSCBCCSSTT---BCCBCTTCEEEEEESSCTTCSSEEEEEETTE
T ss_pred hHHHHHHhhcccc---ccCccccccccccccCCCcccHHHHHHHcCC
Confidence 9999966655433 4555654442 56789999999999999964
No 77
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.91 E-value=4e-25 Score=217.86 Aligned_cols=184 Identities=11% Similarity=0.021 Sum_probs=111.9
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCC
Q 006173 104 RDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDG 182 (658)
Q Consensus 104 d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~ 182 (658)
+..|.||||.|++.|+.++++.|+++|+++. .. . . |.||||+|+..|+.++|++|++.+++ +..|
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~-~~-~-----------~-~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d 67 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVK-FN-P-----------L-PLALLLDSSLEGEFDLVQRIIYEVDDPSLPN 67 (239)
T ss_dssp -------------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCC
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcc-cC-c-----------h-hhHHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 4457778888887777788887777777652 22 2 3 77888888888888888888877764 5667
Q ss_pred CcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhcCCCCCCCCCCcchhhhhhcccccccccCCCCCCC
Q 006173 183 RQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILESLSKRPKAFASGSRLGSWKRLLYQWIPIQEEYNPHPHP 262 (658)
Q Consensus 183 ~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~~~~~~~s~~~l~~~~~~i~~~~~~~~~~~~~~~~ 262 (658)
..|.||||+|+..|+.+++++|++.+.+. +.
T Consensus 68 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~------------------------------------------------ 98 (239)
T 1ycs_B 68 DEGITALHNAVCAGHTEIVKFLVQFGVNV-NA------------------------------------------------ 98 (239)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHHTCCT-TC------------------------------------------------
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCC-Cc------------------------------------------------
Confidence 77788888888888888888887763322 11
Q ss_pred CCCCCCCchhhhhhhhHHHHHHHHHHhhCCCccchhHHHHHHHHHhhhhhhchhhHHHHHhhhhhHHHHHHHHHHHHhhh
Q 006173 263 PSENVGGDLEKQLSVTSKIQLKKFFLQKIPSAFGSLRQKLKFVLWNNLMELAPSIKSIRDAKIIHEQTLEILRIMCAGAV 342 (658)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 342 (658)
T Consensus 99 -------------------------------------------------------------------------------- 98 (239)
T 1ycs_B 99 -------------------------------------------------------------------------------- 98 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcchhhhhcCCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCC-hHHHHH--HHhCCHhHHHHHhcCCCcccc-
Q 006173 343 DILNTHEEAQNVFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGY-DIFKVA--VEHRREKVFNIIFNFPNIYPF- 418 (658)
Q Consensus 343 ~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~-T~Lh~A--~~~~~~~iv~~Ll~~~~~~~~- 418 (658)
+|..|+||||+|+..|+.+++++|++++ ++. +.+|..|. ||||+| +..|+.+++++|++.+++...
T Consensus 99 --------~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~-~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~ 168 (239)
T 1ycs_B 99 --------ADSDGWTPLHCAASCNNVQVCKFLVESG-AAV-FAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIM 168 (239)
T ss_dssp --------CCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCT-TCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTT
T ss_pred --------cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCc-ceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhccccc
Confidence 3445788888899999999999999998 764 44565555 999999 788999999999998762210
Q ss_pred ----cccccccCCCchhhhHhhcCCC
Q 006173 419 ----FMANIDEKRINILHIAAMSVPS 440 (658)
Q Consensus 419 ----~in~~D~~G~TpLHlAa~~g~~ 440 (658)
.....|..|.||+|+|.+.|..
T Consensus 169 ~~~~~~al~d~~~~~~~eLa~~~G~~ 194 (239)
T 1ycs_B 169 NKGVIYALWDYEPQNDDELPMKEGDC 194 (239)
T ss_dssp GGGEEEESSCBCCSSTTBCCBCSSCE
T ss_pred ccceEEEEeccCCCCCCcccccCCCE
Confidence 1223388899999999999873
No 78
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.91 E-value=7.3e-24 Score=193.43 Aligned_cols=54 Identities=13% Similarity=0.121 Sum_probs=36.2
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHhhcCCCcccccccCCChHHHHHHHhCCHhHHHHH
Q 006173 354 VFKKPMFKAARLGIYEIVMGIMNSYFPWSLEFKNKDGYDIFKVAVEHRREKVFNII 409 (658)
Q Consensus 354 ~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~~d~~G~T~Lh~A~~~~~~~iv~~L 409 (658)
.|+||||+|+..|+.+++++|++++ .+ ++.+|..|+||||+|+.+|+.+++++|
T Consensus 99 ~g~t~L~~A~~~~~~~~v~~Ll~~g-a~-~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 99 LKMTALHWATEHNHQEVVELLIKYG-AD-VHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTT-CC-TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcC-CC-ccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 4566666666667777777777766 44 344566777777777777777777665
No 79
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.91 E-value=7e-25 Score=216.13 Aligned_cols=181 Identities=13% Similarity=0.044 Sum_probs=124.7
Q ss_pred hhhhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCCh
Q 006173 30 KDIDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSE 109 (658)
Q Consensus 30 ~~~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~T 109 (658)
|+..+.||||.|++.|+.+.++.++ .++..++ .++.|.|||| .|+..|+.++|+.|++.+. +++.. |..|.|
T Consensus 1 p~~~g~t~L~~a~~~~~~~~~~~ll--~~g~~~~--~~~~~~t~L~-~A~~~g~~~~v~~Ll~~g~--~~~~~-d~~g~t 72 (239)
T 1ycs_B 1 PEITGQVSLPPGKRTNLRKTGSERI--AHGMRVK--FNPLPLALLL-DSSLEGEFDLVQRIIYEVD--DPSLP-NDEGIT 72 (239)
T ss_dssp ----------------------------------------CHHHHH-HHHHHTCHHHHHHHTSTTS--SCCCC-CTTSCC
T ss_pred CCccccccCchhhhhhhHHHHHHHh--ccCCCcc--cCchhhHHHH-HHHHcCCHHHHHHHHHcCC--CCCCc-CCCCCC
Confidence 3567899999999999999999999 4444443 3578899999 9999999999999999943 48888 999999
Q ss_pred HHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcch-h
Q 006173 110 YMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGF-V 187 (658)
Q Consensus 110 pLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~-t 187 (658)
|||+||..|+.+++++|++.++++ +..+. . |+||||+|+..|+.+++++|++++++ ...+..|. |
T Consensus 73 ~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~-----------~-g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t 139 (239)
T 1ycs_B 73 ALHNAVCAGHTEIVKFLVQFGVNV-NAADS-----------D-GWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQT 139 (239)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCT-TCCCT-----------T-CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCC-CccCC-----------C-CCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcc
Confidence 999999999999999999999886 55555 6 99999999999999999999999995 56666666 9
Q ss_pred HHHHH--HhcCcHHHHHHHHHhCCCcc--------ccccCCCCcHhHHHhcCCC
Q 006173 188 LLKFL--IDSNLFDMALALLKCHPMIA--------RADIGETGKILESLSKRPK 231 (658)
Q Consensus 188 ~Lh~A--~~~g~~~iv~~LL~~~~~~~--------~~~d~~g~TpLh~Aa~~~~ 231 (658)
|||+| +..|+.+++++|++...+.. ...+..+.+|++++.+.|.
T Consensus 140 ~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 140 AADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred hHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 99999 88899999999998754321 1226678888888887763
No 80
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.90 E-value=9.9e-24 Score=193.10 Aligned_cols=143 Identities=14% Similarity=0.077 Sum_probs=129.6
Q ss_pred CCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCccc
Q 006173 70 SSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDE 149 (658)
Q Consensus 70 g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~ 149 (658)
|.|||| .|+..|+.++++.|++. ....++.. |..|.||||+ |..|+.+++++|++.++++ +..+.
T Consensus 2 ~~~~L~-~A~~~g~~~~v~~ll~~-~~~~~~~~-~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~---------- 66 (156)
T 1bd8_A 2 AGDRLS-GAAARGDVQEVRRLLHR-ELVHPDAL-NRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDT---------- 66 (156)
T ss_dssp HHHHHH-HHHHHTCHHHHHHHHHT-TCCCTTCC-CTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCT----------
T ss_pred cchHHH-HHHHhCCHHHHHHHHHh-hCcCcccc-CCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCC----------
Confidence 579999 99999999999999998 44458888 9999999999 9999999999999998885 44555
Q ss_pred CCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHHHhc
Q 006173 150 EKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILESLSK 228 (658)
Q Consensus 150 ~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~Aa~ 228 (658)
. |.||||+|+..|+.+++++|++++++ ..+|..|.||||+|+..|+.++++.|++. ...+.+|.+|.||||+|++
T Consensus 67 -~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~g~t~l~~A~~ 142 (156)
T 1bd8_A 67 -S-GTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE--SDLHRRDARGLTPLELALQ 142 (156)
T ss_dssp -T-SCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT--SCTTCCCTTSCCHHHHHHH
T ss_pred -C-CCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc--cCCCCcCCCCCCHHHHHHH
Confidence 6 99999999999999999999999985 67889999999999999999999999998 5567889999999999999
Q ss_pred CCC
Q 006173 229 RPK 231 (658)
Q Consensus 229 ~~~ 231 (658)
.++
T Consensus 143 ~~~ 145 (156)
T 1bd8_A 143 RGA 145 (156)
T ss_dssp SCC
T ss_pred cCc
Confidence 864
No 81
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=4.5e-24 Score=201.19 Aligned_cols=155 Identities=8% Similarity=0.044 Sum_probs=133.4
Q ss_pred hhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCCh----HHHHHHHhcCCccccccccCCCC
Q 006173 32 IDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPA----TLVDKLLSKVPRNCLQNFARDEG 107 (658)
Q Consensus 32 ~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~----~iv~~Ll~~~~~~~l~~~~d~~G 107 (658)
..+|++|+.||+.|+.+.++.++ +.... .+.+..|+|||| .|+..|+. ++|++|++.| .+ ++.+ |.+|
T Consensus 4 ~~~~~~l~~Aa~~g~~~~~~~l~-~~~~~---~~~~~~g~T~Lh-~A~~~~~~~~~~~iv~~Ll~~G-ad-vn~~-d~~g 75 (186)
T 3t8k_A 4 MSEYRTVSAAAMLGTYEDFLELF-EKGYE---DKESVLKSNILY-DVLRNNNDEARYKISMFLINKG-AD-IKSR-TKEG 75 (186)
T ss_dssp HHHCSSHHHHHHHSCHHHHHHHH-HHSSS---CHHHHHTTTHHH-HHTTCSCHHHHHHHHHHHHHTT-CC-SSCC-CTTC
T ss_pred cccccHHHHHHHcCCHHHHHHHH-hcCcc---cccccCCCCHHH-HHHHcCCcchHHHHHHHHHHCC-CC-CCCC-CCCC
Confidence 45789999999999999999999 55433 232467999999 99999985 5999999994 44 8888 9999
Q ss_pred ChHHHHHHhcCC------HHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCC-cHHHHHHHhC-----cHHHHHHhcc-
Q 006173 108 SEYMEYAVSTGK------LNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDL-LPVHMAAKAG-----KRDAVRHLLP- 174 (658)
Q Consensus 108 ~TpLh~Aa~~G~------~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~-TpLh~Aa~~g-----~~~iv~~Ll~- 174 (658)
+||||+|+..|+ .+++++|+++|+++ +.++. . |. ||||+|+..| +.+++++|++
T Consensus 76 ~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadi-n~~d~-----------~-g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~ 142 (186)
T 3t8k_A 76 TTLFFPLFQGGGNDITGTTELCKIFLEKGADI-TALYK-----------P-YKIVVFKNIFNYFVDENEMIPLYKLIFSQ 142 (186)
T ss_dssp CCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCS-SSCBG-----------G-GTBCTTGGGGGCCSCHHHHHHHHHHHHTS
T ss_pred CcHHHHHHHcCCcchhhHHHHHHHHHHCCCCC-CccCC-----------C-cCchHHHHHHHcCCChhhHHHHHHHHHHh
Confidence 999999999997 68999999999986 45555 6 99 9999999944 4679999999
Q ss_pred CCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHh
Q 006173 175 KTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKC 207 (658)
Q Consensus 175 ~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~ 207 (658)
++++ +.+|..|.||||+|+..|+.++++.|++.
T Consensus 143 ~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 143 SGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp TTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHH
T ss_pred cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 8885 78999999999999999999999999875
No 82
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.88 E-value=2.1e-22 Score=179.80 Aligned_cols=125 Identities=16% Similarity=0.058 Sum_probs=97.5
Q ss_pred cCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCC
Q 006173 67 VDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNI 146 (658)
Q Consensus 67 ~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~ 146 (658)
+..|.|||| .|+..|+.++|++|++.+ .+ ++.+ |..|.||||+|+. |+.+++++|++.++++......
T Consensus 9 ~~~g~t~L~-~A~~~~~~~~v~~Ll~~g-~~-~~~~-~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~------- 76 (136)
T 1d9s_A 9 GGSSDAGLA-TAAARGQVETVRQLLEAG-AD-PNAL-NRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPA------- 76 (136)
T ss_dssp CCCCSCHHH-HHHHTTCHHHHHHHHHTT-CC-TTCC-CTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTT-------
T ss_pred CCCCccHHH-HHHHcCCHHHHHHHHHcC-CC-cCCc-CCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCC-------
Confidence 677888888 888888888888888873 33 6677 8888888888888 8888888888877765322222
Q ss_pred cccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHhC
Q 006173 147 KDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKCH 208 (658)
Q Consensus 147 ~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~ 208 (658)
. |+||||+|+..|+.+++++|++++++ ..+|..|.||||+|+..++.+++++|++++
T Consensus 77 ----~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~G 134 (136)
T 1d9s_A 77 ----T-LTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAAT 134 (136)
T ss_dssp ----T-TBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHH
T ss_pred ----C-CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 3 78888888888888888888888875 567788888888888888888888888764
No 83
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.87 E-value=1.1e-22 Score=186.18 Aligned_cols=137 Identities=14% Similarity=0.044 Sum_probs=69.5
Q ss_pred hhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCCh-HH
Q 006173 33 DSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSE-YM 111 (658)
Q Consensus 33 ~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~T-pL 111 (658)
.+.+|||.|+..|+.+.++.|+ +. +..++.+ +..|+|||| +|+ .|+.++|++|++.+ .+ ++.+ |..|.| ||
T Consensus 11 ~~~t~L~~A~~~g~~~~v~~Ll-~~-g~~~~~~-~~~g~t~L~-~A~-~~~~~~v~~Ll~~g-~~-~~~~-d~~g~ttpL 82 (156)
T 1bi7_B 11 PSADWLATAAARGRVEEVRALL-EA-GANPNAP-NSYGRRPIQ-VMM-MGSARVAELLLLHG-AE-PNCA-DPATLTRPV 82 (156)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHH-TT-TCCTTCC-CSSSCCTTT-SSC-TTCHHHHHHHHTTT-CC-CCCC-CTTTCCCHH
T ss_pred cchHHHHHHHHcCCHHHHHHHH-Hc-CCCCCCC-CCCCCCHHH-HHH-cCCHHHHHHHHHcC-CC-CCCc-CCCCCcHHH
Confidence 3556666666666666666666 22 3333333 555666666 553 56666666666652 22 4555 556665 66
Q ss_pred HHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHH
Q 006173 112 EYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLK 190 (658)
Q Consensus 112 h~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh 190 (658)
|+|+..|+.+++++|++.++++ +.++. . |+||||+|+..|+.+++++|++++++ ..++..|.|+.+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~-~~~d~-----------~-g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 83 HDAAREGFLDTLVVLHRAGARL-DVRDA-----------W-GRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE 149 (156)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCS-SCCCT-----------T-CCCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred HHHHHCCCHHHHHHHHHcCCCC-cccCC-----------C-CCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence 6666666666666666655553 33333 4 66666666666666666666666553 344555555544
No 84
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.87 E-value=7.6e-22 Score=176.11 Aligned_cols=131 Identities=11% Similarity=0.077 Sum_probs=110.4
Q ss_pred hhhhhhhhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCC
Q 006173 26 EKIIKDIDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARD 105 (658)
Q Consensus 26 ~~~~~~~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~ 105 (658)
+...+...+.+|||.||..|+.+.++.|+ +. +..++.+ +.+|+|||| .|+..|+.+++++|++.+ .+ ++.. |.
T Consensus 6 ~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll-~~-g~~~~~~-~~~g~t~L~-~A~~~~~~~~v~~Ll~~g-~~-~~~~-d~ 78 (136)
T 2jab_A 6 HHHHHGSDLGKKLLEAARAGQDDEVRILM-AN-GADVNAK-DEYGLTPLY-LATAHGHLEIVEVLLKNG-AD-VNAV-DA 78 (136)
T ss_dssp ------CHHHHHHHHHHHHTCHHHHHHHH-HT-TCCTTCC-CTTSCCHHH-HHHHHTCHHHHHHHHHTT-CC-TTCC-CT
T ss_pred CCCcccccccHHHHHHHHhCCHHHHHHHH-Hc-CCCCCCc-CCCCCCHHH-HHHHcCCHHHHHHHHHcC-CC-CCcC-CC
Confidence 33455567899999999999999999999 44 4445544 889999999 999999999999999994 33 7788 99
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCC
Q 006173 106 EGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKT 176 (658)
Q Consensus 106 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~ 176 (658)
.|.||||+|+..|+.+++++|++.++++ +..+. . |+||||+|+..|+.+++++|+++|
T Consensus 79 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~-----------~-g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 79 IGFTPLHLAAFIGHLEIAEVLLKHGADV-NAQDK-----------F-GKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-----------T-SCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC-cCcCC-----------C-CCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999999998885 44555 6 999999999999999999999875
No 85
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.87 E-value=5.1e-22 Score=181.80 Aligned_cols=143 Identities=18% Similarity=0.083 Sum_probs=112.6
Q ss_pred cCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCC
Q 006173 67 VDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNI 146 (658)
Q Consensus 67 ~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~ 146 (658)
+..|.|||| .|+..|+.++|++|++.+ .+ ++.. |..|+||||+|+ .|+.+++++|++.++++ +..+.
T Consensus 9 ~~~~~t~L~-~A~~~g~~~~v~~Ll~~g-~~-~~~~-~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~------- 75 (156)
T 1bi7_B 9 MEPSADWLA-TAAARGRVEEVRALLEAG-AN-PNAP-NSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADP------- 75 (156)
T ss_dssp -CCSTTHHH-HHHHHTCHHHHHHHHTTT-CC-TTCC-CSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCT-------
T ss_pred CccchHHHH-HHHHcCCHHHHHHHHHcC-CC-CCCC-CCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCC-------
Confidence 678999999 999999999999999984 33 7888 999999999985 99999999999999886 55555
Q ss_pred cccCCCCCc-HHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhH
Q 006173 147 KDEEKDDLL-PVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILE 224 (658)
Q Consensus 147 ~~~~~~G~T-pLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh 224 (658)
. |.| |||+|+..|+.+++++|++++++ ..+|..|.||||+|+..|+.+++++|++++. ..+.+|..|.||.+
T Consensus 76 ----~-g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 76 ----A-TLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAG-GTRGSNHARIDAAE 149 (156)
T ss_dssp ----T-TCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------------
T ss_pred ----C-CCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCC-CCCccCcCcCcccc
Confidence 5 999 99999999999999999999985 6789999999999999999999999998854 45788899999988
Q ss_pred HHhc
Q 006173 225 SLSK 228 (658)
Q Consensus 225 ~Aa~ 228 (658)
-+..
T Consensus 150 ~~~~ 153 (156)
T 1bi7_B 150 GPSD 153 (156)
T ss_dssp ----
T ss_pred cCCC
Confidence 5543
No 86
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.86 E-value=7.3e-23 Score=202.23 Aligned_cols=144 Identities=12% Similarity=0.024 Sum_probs=119.8
Q ss_pred ccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCC
Q 006173 64 CIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDD 143 (658)
Q Consensus 64 ~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d 143 (658)
.+....+.+++. +++..|+.+.+..+... .. .. +.+|.||||+||..|+.++++.|++ +.++ +..+.
T Consensus 9 ~~~~~~~~~~~l-~~~~~g~~~~~~~~~~~-~~----~~-~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~---- 75 (244)
T 3ui2_A 9 SRTAGEGAMEYL-IEWKDGHSPSWVPSSYI-AA----DV-VSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDE---- 75 (244)
T ss_dssp EEEETTTEEEEE-EEESSCCCCEEEEGGGS-CH----HH-HHHHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCT----
T ss_pred hhhcCCCccHHH-HHHHcCCCccccccccc-cc----cc-ccCCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCC----
Confidence 344567789999 99999998887766554 22 22 6689999999999999999999998 6664 44555
Q ss_pred CCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCC-CcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCc
Q 006173 144 PNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDG-RQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGK 221 (658)
Q Consensus 144 ~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~-~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~T 221 (658)
. |+||||+||..|+.++|++|++++++ +..+ ..|.||||+|+..|+.++++.|++++. ..+.+|..|.|
T Consensus 76 -------~-g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-~~~~~d~~g~t 146 (244)
T 3ui2_A 76 -------N-GRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGA-DIEVEDERGLT 146 (244)
T ss_dssp -------T-SCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTCCC
T ss_pred -------C-CCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCCc
Confidence 6 99999999999999999999999996 3555 889999999999999999999999854 45778999999
Q ss_pred HhHHHhcC
Q 006173 222 ILESLSKR 229 (658)
Q Consensus 222 pLh~Aa~~ 229 (658)
|||+|++.
T Consensus 147 ~l~~A~~~ 154 (244)
T 3ui2_A 147 ALELAREI 154 (244)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988765
No 87
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.86 E-value=4.4e-22 Score=177.70 Aligned_cols=128 Identities=16% Similarity=0.074 Sum_probs=112.0
Q ss_pred hhhhhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCC-C
Q 006173 29 IKDIDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDE-G 107 (658)
Q Consensus 29 ~~~~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~-G 107 (658)
..+..+.+|||.|+..|+.+.++.|+ +. +..++.+ +..|+|||| .|+. |+.++|++|++.+ .+ ++.+ |.. |
T Consensus 7 ~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~-g~~~~~~-~~~g~t~L~-~A~~-~~~~~v~~Ll~~g-~~-~~~~-~~~~g 78 (136)
T 1d9s_A 7 MLGGSSDAGLATAAARGQVETVRQLL-EA-GADPNAL-NRFGRRPIQ-VMMM-GSAQVAELLLLHG-AE-PNCA-DPATL 78 (136)
T ss_dssp CCCCCCSCHHHHHHHTTCHHHHHHHH-HT-TCCTTCC-CTTCCTTTT-TSTT-SCHHHHHHHHHHT-CC-SSCC-BTTTT
T ss_pred CCCCCCccHHHHHHHcCCHHHHHHHH-Hc-CCCcCCc-CCCCCCHHH-HHHc-CCHHHHHHHHHCC-CC-CCCc-CCCCC
Confidence 34556889999999999999999999 44 4445544 889999999 9999 9999999999994 34 7788 888 9
Q ss_pred ChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCC
Q 006173 108 SEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTR 177 (658)
Q Consensus 108 ~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~ 177 (658)
.||||+|+..|+.+++++|++.++++ +..+. . |+||||+|+..|+.+++++|+++|+
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~-----------~-g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 79 TRPVHDAAREGFLDTLVVLHRAGARL-DVCDA-----------W-GRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTCCCC-CCCSS-----------S-SSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC-CccCC-----------C-CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 99999999999999999999999885 45555 6 9999999999999999999999876
No 88
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.86 E-value=1.3e-22 Score=191.12 Aligned_cols=137 Identities=13% Similarity=0.076 Sum_probs=109.3
Q ss_pred hhhcCCChHHHHHHHhcCCcc---------ccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCc
Q 006173 77 VGIPDVPATLVDKLLSKVPRN---------CLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIK 147 (658)
Q Consensus 77 ~Aa~~g~~~iv~~Ll~~~~~~---------~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~ 147 (658)
+|++.|..+.+++|++..... ..... |.+|.||||+||..|+.++++.|++ +.++ +..+.
T Consensus 6 ~aa~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~-------- 74 (183)
T 3deo_A 6 IGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADV-VSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDE-------- 74 (183)
T ss_dssp EEEEEETTTEEEEEEEETTCCCCEEEEGGGSCHHH-HHHHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCT--------
T ss_pred HHHHhcCCchhHHHHHHhCCCCccccchhcccccC-CCCCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCC--------
Confidence 566677777777777542111 11223 5689999999999999999999998 6654 44455
Q ss_pred ccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCC-CcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHhHH
Q 006173 148 DEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDG-RQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKILES 225 (658)
Q Consensus 148 ~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~-~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpLh~ 225 (658)
. |+||||+|+..|+.+++++|++++++ +..+ ..|.||||+|+..|+.++++.|++++. ..+.+|.+|.||||+
T Consensus 75 ---~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga-~~~~~d~~g~tpl~~ 149 (183)
T 3deo_A 75 ---N-GRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGA-DIEVEDERGLTALEL 149 (183)
T ss_dssp ---T-SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTC-CTTCCCTTSCCHHHH
T ss_pred ---C-CCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCC-CCcCCCCCCCCHHHH
Confidence 6 99999999999999999999999985 3555 889999999999999999999999854 457889999999998
Q ss_pred HhcC
Q 006173 226 LSKR 229 (658)
Q Consensus 226 Aa~~ 229 (658)
|++.
T Consensus 150 A~~~ 153 (183)
T 3deo_A 150 AREI 153 (183)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8876
No 89
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.86 E-value=9.7e-22 Score=175.43 Aligned_cols=124 Identities=17% Similarity=0.164 Sum_probs=112.3
Q ss_pred cCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCC
Q 006173 67 VDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNI 146 (658)
Q Consensus 67 ~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~ 146 (658)
...|.|||| .||..|+.++|++|++.+ .+ ++.. |..|.||||+||..|+.+++++|++.++++ +..+.
T Consensus 11 ~~~~~t~l~-~A~~~g~~~~v~~Ll~~g-~~-~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~------- 78 (136)
T 2jab_A 11 GSDLGKKLL-EAARAGQDDEVRILMANG-AD-VNAK-DEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDA------- 78 (136)
T ss_dssp -CHHHHHHH-HHHHHTCHHHHHHHHHTT-CC-TTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-------
T ss_pred cccccHHHH-HHHHhCCHHHHHHHHHcC-CC-CCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCC-------
Confidence 456899999 999999999999999994 34 7888 999999999999999999999999998875 44455
Q ss_pred cccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHh
Q 006173 147 KDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKC 207 (658)
Q Consensus 147 ~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~ 207 (658)
. |.||||+|+..|+.+++++|++++++ ...|..|.||||+|+..|+.++++.|++.
T Consensus 79 ----~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 79 ----I-GFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp ----T-CCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred ----C-CCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 6 99999999999999999999999985 67899999999999999999999999975
No 90
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.85 E-value=3.4e-21 Score=168.89 Aligned_cols=124 Identities=18% Similarity=0.270 Sum_probs=99.6
Q ss_pred CCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcc
Q 006173 69 QSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKD 148 (658)
Q Consensus 69 ~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~ 148 (658)
+|+|||| .|+..|+.+++++|++.+ .+ ++.. |..|.||||+|+..|+.+++++|++.++++ +..+.
T Consensus 1 ~g~t~L~-~A~~~~~~~~v~~Ll~~~-~~-~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~--------- 66 (126)
T 1n0r_A 1 NGRTPLH-LAARNGHLEVVKLLLEAG-AD-VNAK-DKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDK--------- 66 (126)
T ss_dssp CCCCHHH-HHHHHTCHHHHHHHHHHT-CC-TTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT---------
T ss_pred CCccHHH-HHHHcCcHHHHHHHHHcC-CC-CCCc-CCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCC---------
Confidence 4788888 888888888888888873 33 6667 888888888888888888888888887764 34444
Q ss_pred cCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHhCC
Q 006173 149 EEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKCHP 209 (658)
Q Consensus 149 ~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~ 209 (658)
. |.||||+|+..|+.+++++|++++++ ..+|..|.||||+|+..|+.+++++|++++.
T Consensus 67 --~-g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 67 --N-GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp --T-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred --C-CCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 5 88888888888888888888888875 5677888888888888888888888887753
No 91
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.84 E-value=1.4e-21 Score=184.14 Aligned_cols=144 Identities=8% Similarity=-0.045 Sum_probs=123.0
Q ss_pred CCcHHHHhhhcCCChHHHHHHHhcCCccccccccC-CCCChHHHHHHhcCCH----HHHHHHHhcCCCCCcccccCCCCC
Q 006173 70 SSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFAR-DEGSEYMEYAVSTGKL----NLITTLMGYNEELPNIKVEKKDDP 144 (658)
Q Consensus 70 g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d-~~G~TpLh~Aa~~G~~----~iv~~Ll~~~~~l~~~~~~~~~d~ 144 (658)
+.++|| .|++.|+.+.++.+++.+ .+.. + ..|+||||+|+..|+. +++++|+++|+++ +.++.
T Consensus 6 ~~~~l~-~Aa~~g~~~~~~~l~~~~----~~~~-~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~----- 73 (186)
T 3t8k_A 6 EYRTVS-AAAMLGTYEDFLELFEKG----YEDK-ESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTK----- 73 (186)
T ss_dssp HCSSHH-HHHHHSCHHHHHHHHHHS----SSCH-HHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCT-----
T ss_pred cccHHH-HHHHcCCHHHHHHHHhcC----cccc-cccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCC-----
Confidence 468999 999999999999999873 2334 4 7899999999999985 5999999999986 44555
Q ss_pred CCcccCCCCCcHHHHHHHhCc------HHHHHHhccCCCC-CCCCCcch-hHHHHHHhcC-----cHHHHHHHHHhCCCc
Q 006173 145 NIKDEEKDDLLPVHMAAKAGK------RDAVRHLLPKTRE-PLDGRQGF-VLLKFLIDSN-----LFDMALALLKCHPMI 211 (658)
Q Consensus 145 ~~~~~~~~G~TpLh~Aa~~g~------~~iv~~Ll~~~~~-~~~~~~g~-t~Lh~A~~~g-----~~~iv~~LL~~~~~~ 211 (658)
. |+||||+|+..|+ .+++++|+++|++ +.+|..|. ||||+|+..+ +.+++++|++..+..
T Consensus 74 ------~-g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad 146 (186)
T 3t8k_A 74 ------E-GTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ 146 (186)
T ss_dssp ------T-CCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC
T ss_pred ------C-CCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC
Confidence 6 9999999999997 5789999999996 78999999 9999999944 457999999944566
Q ss_pred cccccCCCCcHhHHHhcCCCC
Q 006173 212 ARADIGETGKILESLSKRPKA 232 (658)
Q Consensus 212 ~~~~d~~g~TpLh~Aa~~~~~ 232 (658)
++.+|.+|.||||+|++.+..
T Consensus 147 ~~~~d~~G~TpL~~A~~~~~~ 167 (186)
T 3t8k_A 147 LLIKDKWGLTALEFVKRCQKP 167 (186)
T ss_dssp TTCCCTTSCCHHHHHHTTTCH
T ss_pred CcccCCCCCCHHHHHHHcCCH
Confidence 799999999999999998643
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.83 E-value=1.5e-20 Score=176.94 Aligned_cols=140 Identities=11% Similarity=0.026 Sum_probs=121.1
Q ss_pred hhhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccC-CCCCh
Q 006173 31 DIDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFAR-DEGSE 109 (658)
Q Consensus 31 ~~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d-~~G~T 109 (658)
+.++.+|||.|+..|+.+.++.++ + +..++.+ +.+|+|||| .|+..|+.++|++|++++ .+ ++.+ | ..|+|
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll-~--~~~~~~~-d~~g~t~L~-~A~~~~~~~~v~~Ll~~g-a~-~~~~-~~~~g~t 112 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLL-E--DRDVDAV-DENGRTALL-FVAGLGSDKCVRLLAEAG-AD-LDHR-DMRGGLT 112 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHT-T--TSCTTCC-CTTSCCHHH-HHHHHTCHHHHHHHHHTT-CC-TTCC-CSSSSCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHH-h--cCCCCCc-CCCCCCHHH-HHHHcCCHHHHHHHHHcC-CC-CCcC-CCCCCCC
Confidence 457889999999999999999999 5 4455544 889999999 999999999999999994 34 6666 6 89999
Q ss_pred HHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCCCCCCCcchhHH
Q 006173 110 YMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTREPLDGRQGFVLL 189 (658)
Q Consensus 110 pLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~g~t~L 189 (658)
|||+|+..|+.+++++|++.++++ +.++. . |+||||+|++.++. ..+.++|
T Consensus 113 pL~~A~~~~~~~~v~~Ll~~ga~~-~~~d~-----------~-g~tpl~~A~~~~~~----------------~~~~~~l 163 (183)
T 3deo_A 113 ALHMAAGYVRPEVVEALVELGADI-EVEDE-----------R-GLTALELAREILKT----------------TPKGNPM 163 (183)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCT-TCCCT-----------T-SCCHHHHHHHHHHT----------------CCCCSHH
T ss_pred HHHHHHhcCcHHHHHHHHHcCCCC-cCCCC-----------C-CCCHHHHHHHhccC----------------cccccHH
Confidence 999999999999999999999886 45555 6 99999999987654 3468999
Q ss_pred HHHHhcCcHHHHHHHHHh
Q 006173 190 KFLIDSNLFDMALALLKC 207 (658)
Q Consensus 190 h~A~~~g~~~iv~~LL~~ 207 (658)
++|+..|+.++++.|.++
T Consensus 164 ~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 164 QFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCHHHHHHHHHHh
Confidence 999999999999998765
No 93
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.83 E-value=1.6e-20 Score=164.60 Aligned_cols=124 Identities=15% Similarity=0.185 Sum_probs=109.2
Q ss_pred hhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHH
Q 006173 34 SYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEY 113 (658)
Q Consensus 34 ~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~ 113 (658)
+.+|||.|+..|+.+.++.++ +. +..++.. +..|.|||| .|+..|+.+++++|++.+ .+ ++.+ |..|.||||+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll-~~-~~~~~~~-~~~g~t~L~-~A~~~~~~~~~~~Ll~~g-~~-~~~~-~~~g~t~l~~ 74 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLL-EA-GADVNAK-DKNGRTPLH-LAARNGHLEVVKLLLEAG-AD-VNAK-DKNGRTPLHL 74 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHH-HH-TCCTTCC-CTTSCCHHH-HHHHHTCHHHHHHHHHTT-CC-TTCC-CTTSCCHHHH
T ss_pred CccHHHHHHHcCcHHHHHHHH-Hc-CCCCCCc-CCCCCcHHH-HHHHcCcHHHHHHHHHcC-CC-Cccc-CCCCCcHHHH
Confidence 568999999999999999999 54 3334433 788999999 999999999999999984 33 7778 9999999999
Q ss_pred HHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCC
Q 006173 114 AVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTR 177 (658)
Q Consensus 114 Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~ 177 (658)
|+..|+.+++++|++.++++ +..+. . |.||||+|+..|+.+++++|+++|+
T Consensus 75 A~~~~~~~~~~~Ll~~g~~~-~~~~~-----------~-g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 75 AARNGHLEVVKLLLEAGADV-NAKDK-----------N-GRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp HHHTTCHHHHHHHHHTTCCT-TCCCT-----------T-SCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred HHHcChHHHHHHHHHcCCCC-cccCC-----------C-CCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 99999999999999998885 44555 6 9999999999999999999999886
No 94
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.83 E-value=3.6e-21 Score=171.89 Aligned_cols=125 Identities=18% Similarity=0.148 Sum_probs=102.8
Q ss_pred ccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCC
Q 006173 66 IVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPN 145 (658)
Q Consensus 66 ~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~ 145 (658)
.+.+|+|||| .|+..|+.+++++|++.+ .+ ++.+ |..|.||||+|+..|+.+++++|++.++++ +..+.
T Consensus 6 ~~~~g~t~L~-~A~~~~~~~~~~~Ll~~g-~~-~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~------ 74 (137)
T 3c5r_A 6 TNHRGETLLH-IASIKGDIPSVEYLLQNG-SD-PNVK-DHAGWTPLHEACNHGHLKVVELLLQHKALV-NTTGY------ 74 (137)
T ss_dssp CCTTCCCHHH-HHHHHTCHHHHHHHHHTT-CC-SCCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCG------
T ss_pred cCCCCCCHHH-HHHHcCCHHHHHHHHHcC-CC-CCcC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCC------
Confidence 3778899999 999999999999999884 33 6777 889999999999999999999999888775 44444
Q ss_pred CcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHh
Q 006173 146 IKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKC 207 (658)
Q Consensus 146 ~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~ 207 (658)
. |.||||+|+..|+.+++++|++++++ ..+|..|.||||+|+..+..+++++|.+.
T Consensus 75 -----~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 75 -----Q-NDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp -----G-GCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred -----C-CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccc
Confidence 5 89999999999999999999999885 67888999999999988888877666554
No 95
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.83 E-value=2e-20 Score=184.76 Aligned_cols=141 Identities=11% Similarity=0.019 Sum_probs=121.7
Q ss_pred hhhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccC-CCCCh
Q 006173 31 DIDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFAR-DEGSE 109 (658)
Q Consensus 31 ~~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d-~~G~T 109 (658)
+..+.||||.||..|+.+.++.++ + +..++.+ +.+|+|||| .||..|+.++|++|++++ .+ ++.+ | ..|+|
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll-~--~~~~~~~-d~~g~t~L~-~A~~~g~~~~v~~Ll~~g-a~-~~~~-~~~~g~t 113 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLL-E--DRDVDAV-DENGRTALL-FVAGLGSDKCVRLLAEAG-AD-LDHR-DMRGGLT 113 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTT-T--TCCTTCB-CTTSCBHHH-HHHHHTCHHHHHHHHHTT-CC-TTCC-CSSSCCC
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHH-c--CCCCCCc-CCCCCCHHH-HHHHCCCHHHHHHHHHcC-CC-CCcC-CCCCCCC
Confidence 346899999999999999999999 4 4455554 889999999 999999999999999994 34 6666 6 88999
Q ss_pred HHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCCCCCCCcchhHH
Q 006173 110 YMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTREPLDGRQGFVLL 189 (658)
Q Consensus 110 pLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~g~t~L 189 (658)
|||+||..|+.+++++|++.++++ +..+. . |.||||+|+..++ ...+.|||
T Consensus 114 ~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~-----------~-g~t~l~~A~~~~~----------------~~~~~~~l 164 (244)
T 3ui2_A 114 ALHMAAGYVRPEVVEALVELGADI-EVEDE-----------R-GLTALELAREILK----------------TTPKGNPM 164 (244)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-----------T-CCCHHHHHHHHHT----------------TCCCSSHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCC-CCCCC-----------C-CCcHHHHHHHHHh----------------ccCCCCHH
Confidence 999999999999999999999886 45555 6 9999999997432 25679999
Q ss_pred HHHHhcCcHHHHHHHHHhC
Q 006173 190 KFLIDSNLFDMALALLKCH 208 (658)
Q Consensus 190 h~A~~~g~~~iv~~LL~~~ 208 (658)
|+|+..|+.++++.|++..
T Consensus 165 ~~a~~~g~~~iv~~L~~~~ 183 (244)
T 3ui2_A 165 QFGRRIGLEKVINVLEGQV 183 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcChHHHHHHHHHhc
Confidence 9999999999999999863
No 96
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.83 E-value=1.8e-20 Score=190.76 Aligned_cols=138 Identities=13% Similarity=0.040 Sum_probs=115.8
Q ss_pred CCcHHHHhhhcCCChHHHHHHHhcCCcccccc------ccCCCCChHHHHHHhc---CCHHHHHHHHhcCCCCCcccccC
Q 006173 70 SSIFEFIVGIPDVPATLVDKLLSKVPRNCLQN------FARDEGSEYMEYAVST---GKLNLITTLMGYNEELPNIKVEK 140 (658)
Q Consensus 70 g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~------~~d~~G~TpLh~Aa~~---G~~~iv~~Ll~~~~~l~~~~~~~ 140 (658)
+.++|| .|+..|+.+.|+.|++.+ .+ ++. . |..|.||||+|+.. |+.+++++|++.++++ +..+.
T Consensus 151 ~~~~L~-~A~~~g~~~~v~~ll~~g-~d-~~~~~~~~~~-~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~- 224 (301)
T 2b0o_E 151 EPQRLW-TAICNRDLLSVLEAFANG-QD-FGQPLPGPDA-QAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAA- 224 (301)
T ss_dssp CHHHHH-HHHHTTCHHHHHHHHHTT-CC-TTSCEECSSS-CSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCT-
T ss_pred hHHHHh-hhhhccCHHHHHHHHhcC-Cc-ccccCCCccc-CCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCC-
Confidence 356799 999999999999999884 33 444 6 88999999999997 8999999999999886 44455
Q ss_pred CCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCC
Q 006173 141 KDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGET 219 (658)
Q Consensus 141 ~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g 219 (658)
. |+||||+|+..|+.++|++|++++++ ..+|..|.||||+|+..|+.+++++|++.+.+ .|
T Consensus 225 ----------~-G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g 286 (301)
T 2b0o_E 225 ----------D-GNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG-------TF 286 (301)
T ss_dssp ----------T-CCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TT
T ss_pred ----------C-CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CC
Confidence 6 99999999999999999999999996 68899999999999999999999999987543 58
Q ss_pred CcHhHHHhcCCC
Q 006173 220 GKILESLSKRPK 231 (658)
Q Consensus 220 ~TpLh~Aa~~~~ 231 (658)
.||||+|++.+.
T Consensus 287 ~tpLh~A~~~g~ 298 (301)
T 2b0o_E 287 AFPLHVDYSWVI 298 (301)
T ss_dssp SSCCC-------
T ss_pred CChhHHHHhcCC
Confidence 999999998863
No 97
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.82 E-value=1.5e-20 Score=164.55 Aligned_cols=114 Identities=16% Similarity=0.245 Sum_probs=83.1
Q ss_pred cCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCC
Q 006173 67 VDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNI 146 (658)
Q Consensus 67 ~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~ 146 (658)
+..|+|||| .|+..|+.++|+.|++.+ .+ ++.. |..|+||||+||..|+.+++++|++.++++ +..+.
T Consensus 4 ~~~~~~~l~-~A~~~~~~~~v~~ll~~~-~~-~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~------- 71 (123)
T 3aaa_C 4 GSMCDKEFM-WALKNGDLDEVKDYVAKG-ED-VNRT-LEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDK------- 71 (123)
T ss_dssp ---CHHHHH-HHHHTTCHHHHHHHHHTT-CC-TTSC-CTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCT-------
T ss_pred ccccchHHH-HHHHcCCHHHHHHHHHcC-CC-cCcc-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCC-------
Confidence 456778888 888888888888888773 33 6667 778888888888888888888888777664 34444
Q ss_pred cccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHHHhcCc
Q 006173 147 KDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNL 197 (658)
Q Consensus 147 ~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~ 197 (658)
. |+||||+|+..|+.+++++|++++++ ..+|..|.||||+|...+.
T Consensus 72 ----~-g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 118 (123)
T 3aaa_C 72 ----H-HITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAI 118 (123)
T ss_dssp ----T-SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHH
T ss_pred ----C-CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHH
Confidence 5 88888888888888888888888774 5677778888887754433
No 98
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.82 E-value=1e-20 Score=192.60 Aligned_cols=141 Identities=11% Similarity=0.055 Sum_probs=115.7
Q ss_pred hhHHHHHHHHhCCHHHHHHHHhhcCccccccc-----ccCCCCcHHHHhhhcC---CChHHHHHHHhcCCccccccccCC
Q 006173 34 SYKQVTRYILENDWKGLEDYIMSKTPNALTCI-----IVDQSSIFEFIVGIPD---VPATLVDKLLSKVPRNCLQNFARD 105 (658)
Q Consensus 34 ~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~-----~~~~g~T~Lh~~Aa~~---g~~~iv~~Ll~~~~~~~l~~~~d~ 105 (658)
..++|+.|+..|+.+.++.++ +.. ..++.. .+..|+|||| +|+.. |+.++|++|++.+ .+ ++.+ |.
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll-~~g-~d~~~~~~~~~~~~~g~t~Lh-~A~~~~~~~~~~iv~~Ll~~g-ad-vn~~-d~ 224 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAF-ANG-QDFGQPLPGPDAQAPEELVLH-LAVKVANQASLPLVDFIIQNG-GH-LDAK-AA 224 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHH-HTT-CCTTSCEECSSSCSCEECHHH-HHHHTCCTTTHHHHHHHHHHS-SC-TTCC-CT
T ss_pred hHHHHhhhhhccCHHHHHHHH-hcC-CcccccCCCcccCCCCccHHH-HHHHhcccCcHHHHHHHHhcC-CC-CCCC-CC
Confidence 346799999999999999999 443 334432 3778999999 99987 8999999999994 34 8888 99
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCCCCCCCcc
Q 006173 106 EGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTREPLDGRQG 185 (658)
Q Consensus 106 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~~g 185 (658)
+|+||||+|+..|+.+++++|++.++++ +..+. . |.||||+|+..|+.+++++|++++++ .|
T Consensus 225 ~G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~-----------~-G~TpL~~A~~~~~~~iv~~Ll~~ga~-----~g 286 (301)
T 2b0o_E 225 DGNTALHYAALYNQPDCLKLLLKGRALV-GTVNE-----------A-GETALDIARKKHHKECEELLEQAQAG-----TF 286 (301)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCC-SCCCT-----------T-SCCHHHHHHHHTCHHHHHHHHHHHHH-----TT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-----------C-CCCHHHHHHHcCCHHHHHHHHHhcCC-----CC
Confidence 9999999999999999999999999886 55565 6 99999999999999999999998774 58
Q ss_pred hhHHHHHHhcCcH
Q 006173 186 FVLLKFLIDSNLF 198 (658)
Q Consensus 186 ~t~Lh~A~~~g~~ 198 (658)
.||||+|+..|+.
T Consensus 287 ~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 287 AFPLHVDYSWVIS 299 (301)
T ss_dssp SSCCC--------
T ss_pred CChhHHHHhcCCc
Confidence 9999999998864
No 99
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.80 E-value=2.4e-20 Score=181.39 Aligned_cols=126 Identities=16% Similarity=0.129 Sum_probs=105.0
Q ss_pred cCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhc-CCCCCcccccCCCCCC
Q 006173 67 VDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGY-NEELPNIKVEKKDDPN 145 (658)
Q Consensus 67 ~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~-~~~l~~~~~~~~~d~~ 145 (658)
+.+|.|||| .||..|+.++|+.|++.+ .+ ++.+ |..|+||||+||..|+.++|++|++. ++++ +..+.
T Consensus 70 ~~~g~t~L~-~A~~~g~~~~v~~Ll~~g-~~-~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~------ 138 (222)
T 3ehr_A 70 AESIDNPLH-EAAKRGNLSWLRECLDNR-VG-VNGL-DKAGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNK------ 138 (222)
T ss_dssp EEEESCHHH-HHHHHTCHHHHHHHHHTT-CC-TTCC-CTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCT------
T ss_pred ccccccccc-cccccCcHHHHHHHHhCC-CC-cccc-CCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCC------
Confidence 557889999 999999999999999984 33 7788 99999999999999999999999998 6664 45555
Q ss_pred CcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHhCC
Q 006173 146 IKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKCHP 209 (658)
Q Consensus 146 ~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~ 209 (658)
. |+||||+|+..|+.+++++|++++++ ..+|..|.||||+|+..++.++++.|++...
T Consensus 139 -----~-g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~ 197 (222)
T 3ehr_A 139 -----L-GDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDA 197 (222)
T ss_dssp -----T-SCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-------
T ss_pred -----C-CCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccch
Confidence 6 99999999999999999999999985 6789999999999999999999999988744
No 100
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.80 E-value=3.4e-20 Score=165.53 Aligned_cols=128 Identities=10% Similarity=0.047 Sum_probs=108.2
Q ss_pred hhhhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCCh
Q 006173 30 KDIDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSE 109 (658)
Q Consensus 30 ~~~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~T 109 (658)
.+.++.+|||.|+..|+.+.++.++ + .+..++.+ +..|+|||| .|+..|+.+++++|++.+ .+ ++.+ |..|.|
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll-~-~g~~~~~~-~~~g~t~L~-~A~~~~~~~~~~~Ll~~g-~~-~~~~-~~~g~t 78 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLL-Q-NGSDPNVK-DHAGWTPLH-EACNHGHLKVVELLLQHK-AL-VNTT-GYQNDS 78 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHH-H-TTCCSCCC-CTTSCCHHH-HHHHTTCHHHHHHHHHTT-CC-TTCC-CGGGCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHH-H-cCCCCCcC-CCCCCCHHH-HHHHcCCHHHHHHHHHcC-Cc-ccCc-CCCCCC
Confidence 3466889999999999999999999 4 44445544 889999999 999999999999999984 33 7788 999999
Q ss_pred HHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCC
Q 006173 110 YMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTR 177 (658)
Q Consensus 110 pLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~ 177 (658)
|||+|+..|+.+++++|++.++++ +..+. . |.||||+|+..+..+++++|.+...
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~-----------~-g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLSYGASR-NAVNI-----------F-GLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-----------T-SCCGGGGCCCHHHHHHHSCC-----
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCC-CCCCC-----------C-CCCHHHHHhhccHHHHHhhcccccc
Confidence 999999999999999999998885 55555 6 9999999999999999998877654
No 101
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.79 E-value=1.7e-19 Score=157.65 Aligned_cols=118 Identities=12% Similarity=0.107 Sum_probs=99.0
Q ss_pred hhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHH
Q 006173 32 IDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYM 111 (658)
Q Consensus 32 ~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpL 111 (658)
..+.+|||.|+..|+.+.++.++ +. +..++.+ +..|+|||| .|+..|+.++|++|++.+ .+ ++.+ |..|+|||
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll-~~-~~~~~~~-~~~g~t~L~-~A~~~~~~~~v~~Ll~~g-~~-~~~~-d~~g~tpL 77 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYV-AK-GEDVNRT-LEGGRKPLH-YAADCGQLEILEFLLLKG-AD-INAP-DKHHITPL 77 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHH-HT-TCCTTSC-CTTSSCHHH-HHHHTTCHHHHHHHHTTT-CC-TTCC-CTTSCCHH
T ss_pred cccchHHHHHHHcCCHHHHHHHH-Hc-CCCcCcc-CCCCCcHHH-HHHHcCCHHHHHHHHHcC-CC-CCcC-CCCCCCHH
Confidence 34679999999999999999999 44 3445544 889999999 999999999999999984 34 7888 99999999
Q ss_pred HHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHH
Q 006173 112 EYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAV 169 (658)
Q Consensus 112 h~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv 169 (658)
|+|+..|+.+++++|++.++++ +.++. . |.||||+|+..+..+++
T Consensus 78 ~~A~~~~~~~~v~~Ll~~ga~~-~~~~~-----------~-g~t~l~~A~~~~~~~ll 122 (123)
T 3aaa_C 78 LSAVYEGHVSCVKLLLSKGADK-TVKGP-----------D-GLTAFEATDNQAIKALL 122 (123)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCT-TCCCT-----------T-SCCHHHHCCCHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCC-CCcCC-----------C-CCCHHHHhCCHHHHHHh
Confidence 9999999999999999999885 55555 6 99999999655555443
No 102
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.79 E-value=1.5e-19 Score=181.83 Aligned_cols=124 Identities=11% Similarity=0.049 Sum_probs=72.1
Q ss_pred CcHHHHhhhcCCChHHHHHHHhcCCccc----cccccCCCCChHHHHHHhc---CCHHHHHHHHhcCCCCCcccccCCCC
Q 006173 71 SIFEFIVGIPDVPATLVDKLLSKVPRNC----LQNFARDEGSEYMEYAVST---GKLNLITTLMGYNEELPNIKVEKKDD 143 (658)
Q Consensus 71 ~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~----l~~~~d~~G~TpLh~Aa~~---G~~~iv~~Ll~~~~~l~~~~~~~~~d 143 (658)
.++|| .|+..|+.+.++.+++.+.... ++.. |..|.||||+||.. |+.+++++|++.++++ +.++.
T Consensus 131 l~~l~-~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~-~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~---- 203 (278)
T 1dcq_A 131 LHSLC-EAVKTRDIFGLLQAYADGVDLTEKIPLANG-HEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTG---- 203 (278)
T ss_dssp HHHHH-HHHHTTCHHHHHHHHHTTCCTTSBCCCSSC-SSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCT----
T ss_pred hhhhh-hHhhhcccHHHHHHHHhhcchhhhcccccc-ccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCC----
Confidence 45666 6666666666666665532211 3444 55666666666665 5666666666666554 33333
Q ss_pred CCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHhCC
Q 006173 144 PNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKCHP 209 (658)
Q Consensus 144 ~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~ 209 (658)
. |+||||+|+..|+.++|++|++++++ +.+|..|.||||+|+..|+.+++++|++.+.
T Consensus 204 -------~-g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 204 -------K-GSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp -------T-CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred -------C-CCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 4 66666666666666666666666653 4556666666666666666666666665543
No 103
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.78 E-value=1.4e-19 Score=175.90 Aligned_cols=128 Identities=10% Similarity=0.082 Sum_probs=106.0
Q ss_pred hhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHH
Q 006173 32 IDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYM 111 (658)
Q Consensus 32 ~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpL 111 (658)
..+.+|||.||..|+.+.++.|+ + .+..++.+ +..|+|||| .||..|+.++|++|++..+ .+++.+ |..|+|||
T Consensus 71 ~~g~t~L~~A~~~g~~~~v~~Ll-~-~g~~~~~~-~~~g~t~L~-~A~~~~~~~~v~~Ll~~~g-~~~~~~-d~~g~tpL 144 (222)
T 3ehr_A 71 ESIDNPLHEAAKRGNLSWLRECL-D-NRVGVNGL-DKAGSTALY-WACHGGHKDIVEMLFTQPN-IELNQQ-NKLGDTAL 144 (222)
T ss_dssp EEESCHHHHHHHHTCHHHHHHHH-H-TTCCTTCC-CTTSCCHHH-HHHHTTCHHHHHHHTTSTT-CCCCCC-CTTSCCHH
T ss_pred cccccccccccccCcHHHHHHHH-h-CCCCcccc-CCCCCCHHH-HHHHcCCHHHHHHHHcCCC-CCcccc-CCCCCCHH
Confidence 34679999999999999999999 4 44445544 889999999 9999999999999999833 348888 99999999
Q ss_pred HHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC
Q 006173 112 EYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE 178 (658)
Q Consensus 112 h~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~ 178 (658)
|+|+..|+.+++++|+++++++ +..+. . |.||||+|+..|+.++++.|++.++.
T Consensus 145 ~~A~~~~~~~~v~~Ll~~ga~~-~~~~~-----------~-g~t~l~~A~~~~~~~~l~~l~~~~~~ 198 (222)
T 3ehr_A 145 HAAAWKGYADIVQLLLAKGART-DLRNI-----------E-KKLAFDMATNAACASLLKKKQGTDAV 198 (222)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCS-CCCCT-----------T-SCCHHHHCCSHHHHHHHC--------
T ss_pred HHHHHcCCHHHHHHHHHcCCCC-ccccC-----------C-CCCHHHHhcchhHHHHHHHHhccchh
Confidence 9999999999999999999886 55666 6 99999999999999999999999883
No 104
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.77 E-value=8.8e-19 Score=144.89 Aligned_cols=92 Identities=20% Similarity=0.287 Sum_probs=81.7
Q ss_pred CCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcc
Q 006173 69 QSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKD 148 (658)
Q Consensus 69 ~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~ 148 (658)
+|+|||| .|+..|+.+++++|++.+ .+ ++.+ |..|+||||+|+..|+.+++++|++.++++ +.++.
T Consensus 1 ~g~t~L~-~A~~~~~~~~v~~Ll~~g-~~-~n~~-d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~--------- 66 (93)
T 1n0q_A 1 NGRTPLH-LAARNGHLEVVKLLLEAG-AD-VNAK-DKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDK--------- 66 (93)
T ss_dssp --CCHHH-HHHHHTCHHHHHHHHHTT-CC-TTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT---------
T ss_pred CCCcHHH-HHHHcCCHHHHHHHHHcC-CC-Cccc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCC---------
Confidence 5899999 999999999999999984 33 7888 999999999999999999999999998885 44555
Q ss_pred cCCCCCcHHHHHHHhCcHHHHHHhccCCC
Q 006173 149 EEKDDLLPVHMAAKAGKRDAVRHLLPKTR 177 (658)
Q Consensus 149 ~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~ 177 (658)
. |+||||+|+..|+.+++++|+++|+
T Consensus 67 --~-g~t~l~~A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 67 --N-GRTPLHLAARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp --T-SCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred --C-CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 6 9999999999999999999999886
No 105
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.76 E-value=2.7e-18 Score=172.57 Aligned_cols=128 Identities=16% Similarity=0.166 Sum_probs=110.6
Q ss_pred hhhhHHHHHHHHhCCHHHHHHHHhhcCccccccc-----ccCCCCcHHHHhhhcC---CChHHHHHHHhcCCcccccccc
Q 006173 32 IDSYKQVTRYILENDWKGLEDYIMSKTPNALTCI-----IVDQSSIFEFIVGIPD---VPATLVDKLLSKVPRNCLQNFA 103 (658)
Q Consensus 32 ~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~-----~~~~g~T~Lh~~Aa~~---g~~~iv~~Ll~~~~~~~l~~~~ 103 (658)
...+++|+.|+..||.+.++.++ +...+ +... .+..|+|||| .|+.. |+.++|++|++++ .+ ++.+
T Consensus 128 ~~~l~~l~~a~~~~d~~~~~~ll-~~g~~-~~~~~~l~~~~~~g~t~Lh-~A~~~~~~~~~~~v~~Ll~~g-a~-in~~- 201 (278)
T 1dcq_A 128 AAKLHSLCEAVKTRDIFGLLQAY-ADGVD-LTEKIPLANGHEPDETALH-LAVRSVDRTSLHIVDFLVQNS-GN-LDKQ- 201 (278)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHH-HTTCC-TTSBCCCSSCSSTTCBHHH-HHHHHCCTTTHHHHHHHHHHC-SC-TTCC-
T ss_pred chhhhhhhhHhhhcccHHHHHHH-Hhhcc-hhhhccccccccCCCCcch-HHHHhcccchHHHHHHHHHCC-CC-cccc-
Confidence 34678999999999999999999 44433 2222 2778999999 99998 8999999999994 44 8888
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC
Q 006173 104 RDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE 178 (658)
Q Consensus 104 d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~ 178 (658)
|..|+||||+|+..|+.++|++|++.|+++ +.++. . |.||||+|+..|+.+++++|+++++.
T Consensus 202 d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~-----------~-g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 202 TGKGSTALHYCCLTDNAECLKLLLRGKASI-EIANE-----------S-GETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT-----------T-SCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCccC-----------C-CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999885 55555 6 99999999999999999999999883
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.76 E-value=2.3e-18 Score=179.23 Aligned_cols=144 Identities=12% Similarity=0.076 Sum_probs=110.7
Q ss_pred CCCcHHHHhhhcC-CChHHHHHHHhcCCccccccccC--CCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCC
Q 006173 69 QSSIFEFIVGIPD-VPATLVDKLLSKVPRNCLQNFAR--DEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPN 145 (658)
Q Consensus 69 ~g~T~Lh~~Aa~~-g~~~iv~~Ll~~~~~~~l~~~~d--~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~ 145 (658)
.+.|+|| .|+.. |+.++|+.|++.+. + ++.. | ..|.||||+||..|+.++|++|++.++++ +..+.
T Consensus 198 ~~~t~L~-~Aa~~~g~~~~v~~LL~~Ga-d-vn~~-~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~------ 266 (368)
T 3jue_A 198 HPGALLF-RASGHPPSLPTMADALAHGA-D-VNWV-NGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADS------ 266 (368)
T ss_dssp CHHHHHH-HHTSSSCCHHHHHHHHHTTC-C-TTCC-CTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT------
T ss_pred CCCcHHH-HHHHccCCHHHHHHHHHcCC-C-CCcc-ccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCC------
Confidence 4568999 99999 99999999999853 3 6666 6 89999999999999999999999999886 44555
Q ss_pred CcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHhCCC--ccccccCCCCcH
Q 006173 146 IKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKCHPM--IARADIGETGKI 222 (658)
Q Consensus 146 ~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~--~~~~~d~~g~Tp 222 (658)
. |+||||+|+..|+.+++++|++++++ ...|..|.||||+|+..|+.+++++|++.... .....+..+.|+
T Consensus 267 -----~-G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~ 340 (368)
T 3jue_A 267 -----A-GRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETY 340 (368)
T ss_dssp -----T-SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC---------------
T ss_pred -----C-CCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCH
Confidence 6 99999999999999999999999995 67899999999999999999999999976432 223445668888
Q ss_pred hHHHhcC
Q 006173 223 LESLSKR 229 (658)
Q Consensus 223 Lh~Aa~~ 229 (658)
++++...
T Consensus 341 l~i~~~~ 347 (368)
T 3jue_A 341 LDIFRDF 347 (368)
T ss_dssp -------
T ss_pred HHHHHHH
Confidence 8866654
No 107
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.75 E-value=2.4e-18 Score=179.05 Aligned_cols=146 Identities=12% Similarity=0.088 Sum_probs=111.2
Q ss_pred hhhhhhhHHHHHHHHh-CCHHHHHHHHhhcCccccccccc--CCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCC
Q 006173 29 IKDIDSYKQVTRYILE-NDWKGLEDYIMSKTPNALTCIIV--DQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARD 105 (658)
Q Consensus 29 ~~~~~~~~~L~~A~~~-G~~~~v~~ll~~~~~~~~~~~~~--~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~ 105 (658)
.......++||.|+.. |+.+.++.+| + ++..++.. + .+|.|||| .|+..|+.++|++|++++ .+ ++.. |.
T Consensus 194 l~~~~~~t~L~~Aa~~~g~~~~v~~LL-~-~Gadvn~~-~~~~~g~TpLh-~Aa~~g~~~iv~~LL~~G-ad-vn~~-d~ 266 (368)
T 3jue_A 194 LGSLHPGALLFRASGHPPSLPTMADAL-A-HGADVNWV-NGGQDNATPLI-QATAANSLLACEFLLQNG-AN-VNQA-DS 266 (368)
T ss_dssp ---CCHHHHHHHHTSSSCCHHHHHHHH-H-TTCCTTCC-CTTTTCCCHHH-HHHHTTCHHHHHHHHHTT-CC-TTCC-CT
T ss_pred cccCCCCcHHHHHHHccCCHHHHHHHH-H-cCCCCCcc-ccccCCCCHHH-HHHHCCCHHHHHHHHHcC-CC-CCCC-CC
Confidence 3344577899999999 9999999999 4 44555544 4 78999999 999999999999999994 34 8888 99
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC----CCC
Q 006173 106 EGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE----PLD 181 (658)
Q Consensus 106 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~----~~~ 181 (658)
.|+||||+|+..|+.+++++|++.++++ +..+. . |.||||+|+..|+.+++++|+..+.. ...
T Consensus 267 ~G~TpLh~A~~~g~~~~v~~LL~~Gad~-~~~d~-----------~-G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~ 333 (368)
T 3jue_A 267 AGRGPLHHATILGHTGLACLFLKRGADL-GARDS-----------E-GRDPLTIAMETANADIVTLLRLAKMREAEAAQG 333 (368)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-----------T-SCCHHHHHHHTTCHHHHHHHHHHHC--------
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHCcCCC-CCcCC-----------C-CCCHHHHHHHCCCHHHHHHHHHcCCCccccccc
Confidence 9999999999999999999999999886 55555 6 99999999999999999999988752 345
Q ss_pred CCcchhHHHHHHh
Q 006173 182 GRQGFVLLKFLID 194 (658)
Q Consensus 182 ~~~g~t~Lh~A~~ 194 (658)
+..+.|+++.+..
T Consensus 334 ~~~~~t~l~i~~~ 346 (368)
T 3jue_A 334 QAGDETYLDIFRD 346 (368)
T ss_dssp -------------
T ss_pred CCCCCCHHHHHHH
Confidence 5667777776654
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.75 E-value=3.8e-18 Score=186.43 Aligned_cols=124 Identities=11% Similarity=0.118 Sum_probs=68.7
Q ss_pred HHHHHHHHhCCHHHHHHHHhhcCccccccc-----ccCCCCcHHHHhhh---cCCChHHHHHHHhcCCccccccccCCCC
Q 006173 36 KQVTRYILENDWKGLEDYIMSKTPNALTCI-----IVDQSSIFEFIVGI---PDVPATLVDKLLSKVPRNCLQNFARDEG 107 (658)
Q Consensus 36 ~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~-----~~~~g~T~Lh~~Aa---~~g~~~iv~~Ll~~~~~~~l~~~~d~~G 107 (658)
+.||.|+..||.+.++.+| +. +..++.. .+..|+|||| .|| ..|+.++|++|++++ .+ ++.+ |.+|
T Consensus 134 ~~L~~A~~~g~~~~v~~ll-~~-g~~~n~~~~~~~~~~~g~t~Lh-~A~~~a~~g~~~~v~~Ll~~g-a~-vn~~-d~~g 207 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAF-AN-GQDFGQPLPGPDAQAPEELVLH-LAVKVANQASLPLVDFIIQNG-GH-LDAK-AADG 207 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHH-HT-TCCSSSCBCCSSSCCSCBCHHH-HHHHTCCTTTHHHHHHHHHHS-CC-TTCC-CSSS
T ss_pred HHHHHHHhccCHHHHHHHH-hh-cccccCCCCCcccccccchHHH-HHHHhcccccHHHHHHHHHcC-CC-CCcc-CCCC
Confidence 4466666666666666666 22 2222211 1445666666 663 356666666666653 22 5555 6666
Q ss_pred ChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC
Q 006173 108 SEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE 178 (658)
Q Consensus 108 ~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~ 178 (658)
+||||+||..|+.++|++|+++|+++ +..+. . |+||||+|+..|+.+++++|++++++
T Consensus 208 ~TpLh~A~~~g~~~~v~~Ll~~ga~~-~~~d~-----------~-g~tpl~~A~~~~~~~~~~~Ll~~ga~ 265 (497)
T 3lvq_E 208 NTALHYAALYNQPDCLKLLLKGRALV-GTVNE-----------A-GETALDIARKKHHKECEELLEQAQAG 265 (497)
T ss_dssp CCHHHHHTTTTCHHHHHHHHHTCCCC-SCCCT-----------T-CCCHHHHHHHTTCHHHHHHHHHTCC-
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-----------C-CCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence 66666666666666666666665553 33333 4 66666666666666666666666553
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.74 E-value=8.2e-18 Score=139.00 Aligned_cols=91 Identities=21% Similarity=0.369 Sum_probs=81.9
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCc
Q 006173 106 EGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQ 184 (658)
Q Consensus 106 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~ 184 (658)
+|+||||+||..|+.+++++|++.++++ +.++. . |+||||+|+..|+.+++++|++++++ +.+|..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~-----------~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~ 67 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDK-----------N-GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN 67 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-----------T-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCC-----------C-CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC
Confidence 4899999999999999999999998885 44555 6 99999999999999999999999985 678999
Q ss_pred chhHHHHHHhcCcHHHHHHHHHhCC
Q 006173 185 GFVLLKFLIDSNLFDMALALLKCHP 209 (658)
Q Consensus 185 g~t~Lh~A~~~g~~~iv~~LL~~~~ 209 (658)
|.||||+|+..|+.++++.|++++.
T Consensus 68 g~t~l~~A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 68 GRTPLHLAARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 9999999999999999999998753
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.73 E-value=9.5e-18 Score=183.27 Aligned_cols=138 Identities=13% Similarity=0.016 Sum_probs=109.7
Q ss_pred CCcHHHHhhhcCCChHHHHHHHhcCCccc----cccccCCCCChHHHHHHh---cCCHHHHHHHHhcCCCCCcccccCCC
Q 006173 70 SSIFEFIVGIPDVPATLVDKLLSKVPRNC----LQNFARDEGSEYMEYAVS---TGKLNLITTLMGYNEELPNIKVEKKD 142 (658)
Q Consensus 70 g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~----l~~~~d~~G~TpLh~Aa~---~G~~~iv~~Ll~~~~~l~~~~~~~~~ 142 (658)
..+.|| .|+..|+.+.|+.|++.+..-. .... |..|.||||+||. .|+.++|++|++.|+++ +..+.
T Consensus 132 ~~~~L~-~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~-~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~--- 205 (497)
T 3lvq_E 132 EPQRLW-TAICNRDLLSVLEAFANGQDFGQPLPGPDA-QAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAA--- 205 (497)
T ss_dssp CHHHHH-HHHHHTCHHHHHHHHHTTCCSSSCBCCSSS-CCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCS---
T ss_pred cHHHHH-HHHhccCHHHHHHHHhhcccccCCCCCccc-ccccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCC---
Confidence 357899 9999999999999999963211 1123 7789999999966 99999999999999886 55555
Q ss_pred CCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCCCcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCc
Q 006173 143 DPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDGRQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGK 221 (658)
Q Consensus 143 d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~T 221 (658)
. |+||||+||..|+.++|++|+++|++ +.+|..|.||||+|+..|+.+++++|++.+.+. ..+
T Consensus 206 --------~-g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~-------~~~ 269 (497)
T 3lvq_E 206 --------D-GNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGT-------FAF 269 (497)
T ss_dssp --------S-SCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC------------
T ss_pred --------C-CCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCC-------CCC
Confidence 6 99999999999999999999999996 688999999999999999999999999987654 237
Q ss_pred HhHHHhcC
Q 006173 222 ILESLSKR 229 (658)
Q Consensus 222 pLh~Aa~~ 229 (658)
|+|.+...
T Consensus 270 ~~h~~~~~ 277 (497)
T 3lvq_E 270 PLHVDYSW 277 (497)
T ss_dssp --------
T ss_pred cceeeccc
Confidence 88876654
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.71 E-value=9.3e-18 Score=144.63 Aligned_cols=95 Identities=21% Similarity=0.288 Sum_probs=55.0
Q ss_pred cCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCC
Q 006173 67 VDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNI 146 (658)
Q Consensus 67 ~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~ 146 (658)
|.+|+|||| .||..|+.++++.|++.+ .+ ++.. |..|.||||+|+..|+.+++++|++.++++ +..+.
T Consensus 6 d~~g~t~L~-~A~~~~~~~~~~~Ll~~g-~~-~~~~-d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~------- 73 (115)
T 2l6b_A 6 SKDGNTPLH-NAAKNGHAEEVKKLLSKG-AD-VNAR-SKDGNTPLHLAAKNGHAEIVKLLLAKGADV-NARSK------- 73 (115)
T ss_dssp SCSSCCHHH-HHHHHTCHHHHHHHTTTT-CC-SSCC-CSSSCCTTHHHHTTTCHHHHHHHTTTTCCT-TCCCT-------
T ss_pred CCCCCCHHH-HHHHcCCHHHHHHHHHcC-CC-CCCc-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCC-------
Confidence 455666666 666666666666666652 22 4555 566666666666666666666666655553 23333
Q ss_pred cccCCCCCcHHHHHHHhCcHHHHHHhccCCCC
Q 006173 147 KDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE 178 (658)
Q Consensus 147 ~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~ 178 (658)
. |+||||+|+..|+.+++++|++++++
T Consensus 74 ----~-g~tpl~~A~~~~~~~~~~~Ll~~ga~ 100 (115)
T 2l6b_A 74 ----D-GNTPEHLAKKNGHHEIVKLLDAKGAD 100 (115)
T ss_dssp ----T-CCCTTHHHHTTTCHHHHHHHHTTSSS
T ss_pred ----C-CCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 3 66666666666666666666666553
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.69 E-value=3.6e-17 Score=140.94 Aligned_cols=106 Identities=17% Similarity=0.225 Sum_probs=93.1
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC-CCCC
Q 006173 104 RDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE-PLDG 182 (658)
Q Consensus 104 d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~-~~~~ 182 (658)
|++|.||||+||..|+.+++++|++.++++ +..+. . |.||||+|+..|+.+++++|++++++ ..+|
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~-----------~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d 72 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSK-----------D-GNTPLHLAAKNGHAEIVKLLLAKGADVNARS 72 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCS-----------S-SCCTTHHHHTTTCHHHHHHHTTTTCCTTCCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCC-----------C-CCCHHHHHHHcCcHHHHHHHHHcCCCCcccC
Confidence 899999999999999999999999998875 44455 6 99999999999999999999999985 6788
Q ss_pred CcchhHHHHHHhcCcHHHHHHHHHhCCCccccccCCCCcHh
Q 006173 183 RQGFVLLKFLIDSNLFDMALALLKCHPMIARADIGETGKIL 223 (658)
Q Consensus 183 ~~g~t~Lh~A~~~g~~~iv~~LL~~~~~~~~~~d~~g~TpL 223 (658)
..|.||||+|+..|+.++++.|++++.+ ++.++..|.||=
T Consensus 73 ~~g~tpl~~A~~~~~~~~~~~Ll~~ga~-~n~~~~~~~~~~ 112 (115)
T 2l6b_A 73 KDGNTPEHLAKKNGHHEIVKLLDAKGAD-VNARSWGSSHHH 112 (115)
T ss_dssp TTCCCTTHHHHTTTCHHHHHHHHTTSSS-HHHHSCCCC---
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCcCCccccccc
Confidence 9999999999999999999999988554 577888888873
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.63 E-value=3.9e-16 Score=133.27 Aligned_cols=92 Identities=12% Similarity=0.123 Sum_probs=78.4
Q ss_pred ccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCC
Q 006173 64 CIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDD 143 (658)
Q Consensus 64 ~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d 143 (658)
...+.+|+|||| .|+..|+.+++++|++.+ .+ ++.+ |..|+||||+||..|+.+++++|++.++++ +..+.
T Consensus 18 ~~~~~~g~t~L~-~A~~~g~~~~v~~Ll~~g-~~-i~~~-d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d~---- 88 (110)
T 2zgd_A 18 SHMGSDLGKKLL-EAARAGQDDEVRILMANG-AD-VAAK-DKNGSTPLHLAARNGHLEVVKLLLEAGADV-XAQDK---- 88 (110)
T ss_dssp ----CCHHHHHH-HHHHHTCHHHHHHHHHTT-CC-TTCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT----
T ss_pred cccCCccchHHH-HHHHcCCHHHHHHHHHcC-CC-CCcc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-ccccc----
Confidence 345788999999 999999999999999984 33 7788 999999999999999999999999998885 44555
Q ss_pred CCCcccCCCCCcHHHHHHHhCcHHHHHHh
Q 006173 144 PNIKDEEKDDLLPVHMAAKAGKRDAVRHL 172 (658)
Q Consensus 144 ~~~~~~~~~G~TpLh~Aa~~g~~~iv~~L 172 (658)
. |+||||+|+..|+.+++++|
T Consensus 89 -------~-g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 89 -------F-GKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp -------T-SCCHHHHHHHHTCHHHHHHH
T ss_pred -------C-CCcHHHHHHHcCCHHHHHHh
Confidence 6 99999999999999999987
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.60 E-value=1.8e-15 Score=129.13 Aligned_cols=92 Identities=21% Similarity=0.275 Sum_probs=80.0
Q ss_pred cccccCCCCChHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhccCCCC
Q 006173 99 LQNFARDEGSEYMEYAVSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGKRDAVRHLLPKTRE 178 (658)
Q Consensus 99 l~~~~d~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~~~iv~~Ll~~~~~ 178 (658)
.... |.+|.||||+||..|+.+++++|++.++++ +..+. . |.||||+||..|+.+++++|++++++
T Consensus 17 ~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~-----------~-g~tpLh~A~~~~~~~~v~~Ll~~ga~ 82 (110)
T 2zgd_A 17 GSHM-GSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDK-----------N-GSTPLHLAARNGHLEVVKLLLEAGAD 82 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCT-----------T-CCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred cccc-CCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCC-----------C-CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 3444 889999999999999999999999998875 44455 6 99999999999999999999999985
Q ss_pred -CCCCCcchhHHHHHHhcCcHHHHHHH
Q 006173 179 -PLDGRQGFVLLKFLIDSNLFDMALAL 204 (658)
Q Consensus 179 -~~~~~~g~t~Lh~A~~~g~~~iv~~L 204 (658)
..+|..|.||||+|+..|+.+++++|
T Consensus 83 ~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 83 VXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred ccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 67899999999999999999999876
No 115
>4hkr_A Calcium release-activated calcium channel protein; ORAI1, eukaryotic membrane protein, membran protein, ION channel, STIM, membrane; 3.35A {Drosophila melanogaster} PDB: 4hks_A
Probab=46.30 E-value=1.7e+02 Score=26.37 Aligned_cols=106 Identities=16% Similarity=0.216 Sum_probs=50.5
Q ss_pred cchhHHHhhHHHHHHHHHHHHHHHhhccccccc----------hhhHhhhhHH--HHHHHHHHHHHHHHHHHHHHHHHHh
Q 006173 540 SFTIFGISNALALFSSVISVLIFLGILTSRFSE----------EDFLVSLPRK--LIIGLITLFFSIACLMVAFAATVHI 607 (658)
Q Consensus 540 ~f~~F~~~~~~a~~~s~~~~~~~~~~~~~~~~~----------~~~~~~l~~~--~~~~~~~l~~s~~~m~~af~~~~~~ 607 (658)
.+.+|.++-++-+.+-+.++++-.++++.--.. +.-+..+..+ +.|++.....-..+| +--+...|+
T Consensus 59 LLi~fav~Ttllv~vml~AlMIsTcILPnIeav~~~h~~~~v~esPH~r~~~yIE~AW~fST~lGi~LFL-~evall~WV 137 (214)
T 4hkr_A 59 MLIAFAICTTLLVAVHMLALMISTCILPNIETVSNLHSISLVHESPHERLHWYIETAWAFSTLLGLILFL-LEIAILCWV 137 (214)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTC----------------CHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhcccccccCCChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhheE
Confidence 467888888888888877766655555421111 1112222222 246554322222222 112222333
Q ss_pred hccCCCcchhHHHHHHHHHHH-HHHHHhhhHHHHHHHHHhh
Q 006173 608 TQFHPWKWVIIPTALLGFLPV-FLFATLQFPLLIEVFASTY 647 (658)
Q Consensus 608 v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 647 (658)
-..+.....++...++ .+|+ ++|+....-+|..+..+.|
T Consensus 138 KF~~~~~~aa~~~t~v-liPv~i~F~~Fa~hFYrsL~~hk~ 177 (214)
T 4hkr_A 138 KFYDLSRRAAWSATVV-LIPVMIIFMAFAIHFYRSLVSHKY 177 (214)
T ss_dssp HHTTTCHHHHHHHHHH-THHHHHHHHHHHHHHHHHHHHTHH
T ss_pred EeecCCcHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444443333322222 3454 3466667777777776665
No 116
>3tlw_A GLR4197 protein, GLIC; Cys-loop receptor family, membrane protein, transport protei; HET: LMT; 2.60A {Gloeobacter violaceus} PDB: 3uu4_A* 3uub_A* 3tlv_A* 3uu6_A* 3uu5_A* 3uu3_A* 3tlu_A* 3uu8_A* 3tls_A* 3tlt_A* 3p4w_A* 3p50_A* 3eam_A* 4f8h_A* 2xq4_A 2xq5_A 2xq6_A 2xq3_A 2xq8_A 2xqa_A ...
Probab=39.69 E-value=1.9e+02 Score=28.18 Aligned_cols=46 Identities=28% Similarity=0.248 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCcccCCCccchhHHHhhHHHHHHHHHHH
Q 006173 507 VVATLIMTIVFAAAITVPGGSDSRGMPNFLEEPSFTIFGISNALALFSSVISV 559 (658)
Q Consensus 507 vva~Liatv~f~a~~t~Pgg~~~~g~~~~~~~~~f~~F~~~~~~a~~~s~~~~ 559 (658)
-+.+|++.++|...++ +-.|..+.-++...|.....+-.+.|++..
T Consensus 232 ~it~lL~~t~~~~~~~-------~~lP~~s~vp~i~~~~~~~~~~v~~sll~~ 277 (321)
T 3tlw_A 232 VVSTLIAHIAFNILVE-------TCLPKTPYMTYTGAIIFMIYLFYFVAVIEV 277 (321)
T ss_dssp HHHHHHHHHHHHHHHC-------CCCCCCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EhhHHHHHHHHHHHHH-------hhCCCccccHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555554442 122222333445566655555555555443
No 117
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=35.31 E-value=29 Score=21.85 Aligned_cols=19 Identities=16% Similarity=0.080 Sum_probs=15.7
Q ss_pred HHHHHHHHhCCHHHHHHHH
Q 006173 36 KQVTRYILENDWKGLEDYI 54 (658)
Q Consensus 36 ~~L~~A~~~G~~~~v~~ll 54 (658)
..++.||..||.+.++.|=
T Consensus 15 QqiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 15 KQMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHH
Confidence 4588999999999998763
No 118
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=28.23 E-value=62 Score=32.08 Aligned_cols=21 Identities=5% Similarity=-0.023 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 006173 588 ITLFFSIACLMVAFAATVHIT 608 (658)
Q Consensus 588 ~~l~~s~~~m~~af~~~~~~v 608 (658)
.+..+|++++..+|++|+|-+
T Consensus 281 ~LTiit~IflP~T~IaGiyGM 301 (339)
T 4ev6_A 281 ILTMVTTIFAVPMWITGIYGM 301 (339)
T ss_dssp HHHHHHHHSSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhhccC
Confidence 356678888999999999987
No 119
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=25.63 E-value=48 Score=33.29 Aligned_cols=21 Identities=10% Similarity=0.121 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 006173 588 ITLFFSIACLMVAFAATVHIT 608 (658)
Q Consensus 588 ~~l~~s~~~m~~af~~~~~~v 608 (658)
.+..+|+++|..+|++|+|-+
T Consensus 305 ~LTiit~IflP~T~IaGiyGM 325 (363)
T 2iub_A 305 VLTIIATIFMPLTFIAGIYGM 325 (363)
T ss_dssp HHHHHHHHHHHHHHHTTSCC-
T ss_pred HHHHHHHHHHHHHHHHhhhcc
Confidence 356678888999999999876
No 120
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=24.38 E-value=1.5e+02 Score=29.32 Aligned_cols=89 Identities=4% Similarity=0.047 Sum_probs=37.1
Q ss_pred hhhhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCCh
Q 006173 30 KDIDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSE 109 (658)
Q Consensus 30 ~~~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~T 109 (658)
.|..+..-+-.....|+.+....++.+-.+....-..+..|.-.+. .+......+-...+++...+.......|.+|+.
T Consensus 69 ~d~~gn~vvQklle~~~~~~~~~i~~~i~g~~~~l~~~~~G~rvvQ-k~le~~~~~~~~~i~~el~~~~~~L~~d~~Gn~ 147 (351)
T 3gvo_A 69 TDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQ-KALESISSDQQSEMVKELDGHVLKCVKDQNGNH 147 (351)
T ss_dssp TSTTHHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHTSTTHHHHHH-HHHHHSCHHHHHHHHGGGTTCHHHHHHSTTHHH
T ss_pred hChhhhHHHHHHHhhCCHHHHHHHHHHHHhhHHHHhhCHHhHHHHH-HHHHhCCHHHHHHHHHHhhhhHHHHHHhhhhhH
Confidence 3444444455555555555555444222222222223445555555 544444444444444333222222211445554
Q ss_pred HHHHHHhcCC
Q 006173 110 YMEYAVSTGK 119 (658)
Q Consensus 110 pLh~Aa~~G~ 119 (658)
.+......+.
T Consensus 148 ViQk~l~~~~ 157 (351)
T 3gvo_A 148 VVQKCIECVQ 157 (351)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHHhCC
Confidence 4444444333
No 121
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=24.35 E-value=86 Score=31.16 Aligned_cols=100 Identities=6% Similarity=-0.112 Sum_probs=68.8
Q ss_pred hhhhhhhHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCC
Q 006173 29 IKDIDSYKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGS 108 (658)
Q Consensus 29 ~~~~~~~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~ 108 (658)
..|-++..-|-.....++.+....++.+-.+....--.|..|+..+. .....|..+....+++...+..+....|.+|.
T Consensus 32 a~dq~gsR~lQ~~l~~~~~~~~~~i~~ei~~~~~~L~~d~~gn~vvQ-klle~~~~~~~~~i~~~i~g~~~~l~~~~~G~ 110 (351)
T 3gvo_A 32 SQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQ-KFFEFGSLDQKLALATRIRGHVLPLALQMYGC 110 (351)
T ss_dssp HTSHHHHHHHHHHHHHCCHHHHHHHHHHHGGGHHHHHTSTTHHHHHH-HHHHHCCHHHHHHHHHHHTTCHHHHHTSTTHH
T ss_pred hcCCcchHHHHHHHhhCCHHHHHHHHHHHHHhHHHHHhChhhhHHHH-HHHhhCCHHHHHHHHHHHHhhHHHHhhCHHhH
Confidence 44455666677788888888877777333344333445888999988 88888888888777776544444443378888
Q ss_pred hHHHHHHhcCCHHHHHHHHhc
Q 006173 109 EYMEYAVSTGKLNLITTLMGY 129 (658)
Q Consensus 109 TpLh~Aa~~G~~~iv~~Ll~~ 129 (658)
-.+.-+......+-...+++.
T Consensus 111 rvvQk~le~~~~~~~~~i~~e 131 (351)
T 3gvo_A 111 RVIQKALESISSDQQSEMVKE 131 (351)
T ss_dssp HHHHHHHHHSCHHHHHHHHGG
T ss_pred HHHHHHHHhCCHHHHHHHHHH
Confidence 888888777776655555543
No 122
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=22.53 E-value=2.7e+02 Score=24.55 Aligned_cols=132 Identities=8% Similarity=-0.073 Sum_probs=86.8
Q ss_pred hHHHHHHHHhCCHHHHHHHHhhcCcccccccccCCCCcHHHHhhhcCCChHHHHHHHhcCCccccccccCCCCChHHHHH
Q 006173 35 YKQVTRYILENDWKGLEDYIMSKTPNALTCIIVDQSSIFEFIVGIPDVPATLVDKLLSKVPRNCLQNFARDEGSEYMEYA 114 (658)
Q Consensus 35 ~~~L~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~~g~T~Lh~~Aa~~g~~~iv~~Ll~~~~~~~l~~~~d~~G~TpLh~A 114 (658)
.+.+-.|...||++....+. +.- +. ....++.=. .|...|+.++++.-..+.+ |-.+ .+.+.
T Consensus 9 ~~rF~LAL~lg~l~~A~e~a-~~l-~~-----~~~Wk~Lg~-~AL~~gn~~lAe~cy~~~~--------D~~~--L~~Ly 70 (177)
T 3mkq_B 9 HIRFDLALEYGNLDAALDEA-KKL-ND-----SITWERLIQ-EALAQGNASLAEMIYQTQH--------SFDK--LSFLY 70 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHH-HHH-CC-----HHHHHHHHH-HHHHTTCHHHHHHHHHHTT--------CHHH--HHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHH-HHh-CC-----HHHHHHHHH-HHHHcCChHHHHHHHHHhC--------CHHH--HHHHH
Confidence 45678899999999999987 321 10 112234445 7888999999999888722 2222 34445
Q ss_pred HhcCCHHHHHHHHhcCCCCCcccccCCCCCCCcccCCCCCcHHHHHHHhCc-HHHHHHhccCCCCCCCCCcchhHHHHHH
Q 006173 115 VSTGKLNLITTLMGYNEELPNIKVEKKDDPNIKDEEKDDLLPVHMAAKAGK-RDAVRHLLPKTREPLDGRQGFVLLKFLI 193 (658)
Q Consensus 115 a~~G~~~iv~~Ll~~~~~l~~~~~~~~~d~~~~~~~~~G~TpLh~Aa~~g~-~~iv~~Ll~~~~~~~~~~~g~t~Lh~A~ 193 (658)
...|+.+-++.+.+.... ++ + -....|.+-..|. .+.+++|.+.+. ..-+...|-
T Consensus 71 ~~tg~~e~L~kla~iA~~----~g------------~-~n~af~~~l~lGdv~~~i~lL~~~~r-------~~eA~~~A~ 126 (177)
T 3mkq_B 71 LVTGDVNKLSKMQNIAQT----RE------------D-FGSMLLNTFYNNSTKERSSIFAEGGS-------LPLAYAVAK 126 (177)
T ss_dssp HHHTCHHHHHHHHHHHHH----TT------------C-HHHHHHHHHHHTCHHHHHHHHHHTTC-------HHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHH----Cc------------c-HHHHHHHHHHcCCHHHHHHHHHHCCC-------hHHHHHHHH
Confidence 567888777766543211 11 1 3357788888888 568888877654 234555677
Q ss_pred hcCcHHHHHHHHHhC
Q 006173 194 DSNLFDMALALLKCH 208 (658)
Q Consensus 194 ~~g~~~iv~~LL~~~ 208 (658)
.+|..+++..+++..
T Consensus 127 t~g~~~~a~~~~~~~ 141 (177)
T 3mkq_B 127 ANGDEAAASAFLEQA 141 (177)
T ss_dssp HTTCHHHHHHHHHHT
T ss_pred HcCcHHHHHHHHHHh
Confidence 899999999999764
Done!