Query 006176
Match_columns 658
No_of_seqs 383 out of 2459
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 18:02:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006176.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006176hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dgk_A Phytoene dehydrogenase; 100.0 4E-57 1.4E-61 503.3 38.3 476 157-652 1-492 (501)
2 3ka7_A Oxidoreductase; structu 100.0 2.2E-36 7.7E-41 328.8 42.4 409 158-648 1-424 (425)
3 3nrn_A Uncharacterized protein 100.0 4E-34 1.4E-38 310.8 39.7 407 158-657 1-411 (421)
4 1s3e_A Amine oxidase [flavin-c 100.0 3.6E-32 1.2E-36 303.6 36.4 432 156-653 3-456 (520)
5 2yg5_A Putrescine oxidase; oxi 100.0 1.5E-31 5.2E-36 293.2 33.9 432 156-652 4-452 (453)
6 2ivd_A PPO, PPOX, protoporphyr 100.0 1.6E-32 5.4E-37 303.2 26.2 427 155-656 14-478 (478)
7 2vvm_A Monoamine oxidase N; FA 100.0 5E-30 1.7E-34 284.4 32.5 427 157-654 39-488 (495)
8 1sez_A Protoporphyrinogen oxid 100.0 1E-30 3.6E-35 290.6 23.4 432 156-653 12-495 (504)
9 3i6d_A Protoporphyrinogen oxid 100.0 3E-30 1E-34 284.0 22.6 430 157-651 5-468 (470)
10 3nks_A Protoporphyrinogen oxid 100.0 1.8E-29 6.3E-34 278.5 18.5 429 157-650 2-473 (477)
11 3lov_A Protoporphyrinogen oxid 100.0 1.4E-28 4.9E-33 271.2 24.6 423 157-654 4-468 (475)
12 1b37_A Protein (polyamine oxid 100.0 1.4E-27 5E-32 263.0 31.6 432 156-653 3-460 (472)
13 2jae_A L-amino acid oxidase; o 100.0 5.5E-28 1.9E-32 267.6 25.6 425 155-654 9-488 (489)
14 2bcg_G Secretory pathway GDP d 100.0 3.1E-27 1.1E-31 258.6 29.3 398 155-648 9-438 (453)
15 2iid_A L-amino-acid oxidase; f 100.0 5.3E-27 1.8E-31 260.3 26.4 435 156-653 32-486 (498)
16 1d5t_A Guanine nucleotide diss 99.9 2.8E-26 9.5E-31 249.5 27.1 391 156-648 5-427 (433)
17 4gde_A UDP-galactopyranose mut 99.9 4.5E-27 1.5E-31 261.7 20.5 423 155-649 8-477 (513)
18 3k7m_X 6-hydroxy-L-nicotine ox 99.9 2E-24 6.8E-29 235.0 34.9 411 158-649 2-424 (431)
19 1rsg_A FMS1 protein; FAD bindi 99.9 1.5E-26 5.2E-31 257.7 17.1 281 156-486 7-309 (516)
20 2xag_A Lysine-specific histone 99.9 5E-24 1.7E-28 246.7 31.3 244 376-652 562-830 (852)
21 2z3y_A Lysine-specific histone 99.9 9.1E-24 3.1E-28 241.4 32.8 244 376-652 391-659 (662)
22 2b9w_A Putative aminooxidase; 99.9 1.7E-23 5.9E-28 227.1 29.3 411 156-648 5-423 (424)
23 4dsg_A UDP-galactopyranose mut 99.9 1.3E-23 4.6E-28 231.4 24.6 415 155-648 7-452 (484)
24 3qj4_A Renalase; FAD/NAD(P)-bi 99.9 2.2E-22 7.6E-27 211.9 24.2 232 378-651 104-342 (342)
25 4gut_A Lysine-specific histone 99.9 4E-22 1.4E-26 229.5 28.1 425 155-649 334-775 (776)
26 3ayj_A Pro-enzyme of L-phenyla 99.9 1.7E-22 5.7E-27 227.7 21.7 261 376-655 337-683 (721)
27 3p1w_A Rabgdi protein; GDI RAB 99.9 1.4E-20 4.9E-25 203.9 25.6 331 155-534 18-386 (475)
28 1yvv_A Amine oxidase, flavin-c 99.9 2.4E-19 8.2E-24 187.9 29.5 325 157-656 2-332 (336)
29 1v0j_A UDP-galactopyranose mut 99.8 7.7E-20 2.6E-24 196.5 15.5 234 156-445 6-251 (399)
30 1vg0_A RAB proteins geranylger 99.8 5.8E-18 2E-22 188.5 30.5 259 223-533 237-508 (650)
31 1i8t_A UDP-galactopyranose mut 99.8 2.5E-19 8.5E-24 190.3 17.9 253 157-483 1-261 (367)
32 2bi7_A UDP-galactopyranose mut 99.8 5.2E-18 1.8E-22 181.2 24.0 226 157-446 3-241 (384)
33 3dje_A Fructosyl amine: oxygen 99.7 1.1E-14 3.6E-19 158.5 25.9 72 377-450 148-226 (438)
34 3hdq_A UDP-galactopyranose mut 99.6 5.2E-15 1.8E-19 157.3 17.3 229 155-444 27-264 (397)
35 2e1m_A L-glutamate oxidase; L- 99.6 1E-14 3.4E-19 153.9 19.3 80 155-239 42-132 (376)
36 1y56_B Sarcosine oxidase; dehy 99.6 2.3E-13 7.9E-18 145.0 27.0 210 378-650 138-355 (382)
37 3ps9_A TRNA 5-methylaminomethy 99.6 1.9E-13 6.4E-18 156.8 27.0 67 376-443 404-473 (676)
38 3nyc_A D-arginine dehydrogenas 99.6 6.2E-14 2.1E-18 149.0 21.2 66 376-443 141-209 (381)
39 1ryi_A Glycine oxidase; flavop 99.6 2.4E-14 8.2E-19 152.5 16.7 205 377-649 152-361 (382)
40 3pvc_A TRNA 5-methylaminomethy 99.6 2E-13 6.9E-18 156.7 23.7 67 376-443 399-469 (689)
41 3oz2_A Digeranylgeranylglycero 99.6 2.2E-13 7.6E-18 145.2 22.4 64 387-450 103-169 (397)
42 2gag_B Heterotetrameric sarcos 99.5 4.4E-13 1.5E-17 143.8 23.8 66 377-443 162-230 (405)
43 2oln_A NIKD protein; flavoprot 99.5 5.5E-12 1.9E-16 135.0 31.5 65 377-443 141-208 (397)
44 3dme_A Conserved exported prot 99.5 5.3E-13 1.8E-17 141.0 22.2 66 378-443 139-209 (369)
45 2uzz_A N-methyl-L-tryptophan o 99.5 6.6E-14 2.3E-18 148.6 14.5 70 377-450 137-209 (372)
46 3kkj_A Amine oxidase, flavin-c 99.5 3.1E-12 1.1E-16 128.2 25.9 58 157-214 2-59 (336)
47 2gf3_A MSOX, monomeric sarcosi 99.5 4.9E-12 1.7E-16 134.9 26.6 56 386-443 150-205 (389)
48 3axb_A Putative oxidoreductase 99.4 3E-12 1E-16 139.5 19.0 58 386-444 181-255 (448)
49 3cgv_A Geranylgeranyl reductas 99.4 3.2E-11 1.1E-15 128.8 25.7 64 387-450 103-169 (397)
50 3rp8_A Flavoprotein monooxygen 99.4 9.3E-12 3.2E-16 133.8 20.5 60 387-449 128-187 (407)
51 1pj5_A N,N-dimethylglycine oxi 99.4 3.7E-11 1.3E-15 140.9 24.3 67 377-444 139-208 (830)
52 3nix_A Flavoprotein/dehydrogen 99.4 1.7E-11 5.9E-16 132.1 18.9 64 387-450 107-173 (421)
53 3ihg_A RDME; flavoenzyme, anth 99.3 8.8E-11 3E-15 130.9 21.2 63 387-450 121-190 (535)
54 3v76_A Flavoprotein; structura 99.3 2.4E-11 8.2E-16 130.6 15.1 64 378-443 124-187 (417)
55 3atr_A Conserved archaeal prot 99.3 2.3E-10 8E-15 124.7 23.2 64 387-450 101-169 (453)
56 3i3l_A Alkylhalidase CMLS; fla 99.3 2.8E-10 9.5E-15 127.7 23.1 65 386-450 128-195 (591)
57 1qo8_A Flavocytochrome C3 fuma 99.3 5E-11 1.7E-15 133.7 16.4 59 386-444 250-313 (566)
58 4at0_A 3-ketosteroid-delta4-5a 99.3 5.8E-11 2E-15 131.5 16.8 60 384-443 200-264 (510)
59 1y0p_A Fumarate reductase flav 99.3 6.3E-11 2.2E-15 133.0 17.0 58 386-443 255-317 (571)
60 2i0z_A NAD(FAD)-utilizing dehy 99.2 6E-11 2E-15 129.1 14.6 59 385-443 133-191 (447)
61 3da1_A Glycerol-3-phosphate de 99.2 3E-11 1E-15 135.1 10.2 58 386-443 170-232 (561)
62 3e1t_A Halogenase; flavoprotei 99.2 6E-10 2.1E-14 123.4 20.5 63 387-449 112-178 (512)
63 2vdc_G Glutamate synthase [NAD 99.2 1.5E-11 5E-16 133.9 5.9 91 107-197 72-162 (456)
64 3fmw_A Oxygenase; mithramycin, 99.2 2.5E-10 8.4E-15 127.7 15.3 64 386-450 148-214 (570)
65 1d4d_A Flavocytochrome C fumar 99.1 8.6E-10 2.9E-14 123.7 19.2 58 386-443 255-317 (572)
66 1c0p_A D-amino acid oxidase; a 99.1 7E-10 2.4E-14 117.1 17.2 40 155-194 4-43 (363)
67 3nlc_A Uncharacterized protein 99.1 5.3E-10 1.8E-14 123.6 16.5 58 386-443 220-277 (549)
68 3g3e_A D-amino-acid oxidase; F 99.1 7.3E-10 2.5E-14 116.4 16.1 191 386-652 142-335 (351)
69 2rgh_A Alpha-glycerophosphate 99.1 9.8E-10 3.4E-14 123.0 17.7 59 386-444 188-251 (571)
70 2gqf_A Hypothetical protein HI 99.1 4E-10 1.4E-14 120.6 13.7 58 384-443 107-168 (401)
71 4hb9_A Similarities with proba 99.1 8.3E-09 2.8E-13 110.3 21.2 52 400-451 123-174 (412)
72 2x3n_A Probable FAD-dependent 99.0 1.3E-09 4.6E-14 116.5 13.9 66 386-451 107-174 (399)
73 2vou_A 2,6-dihydroxypyridine h 99.0 4.8E-09 1.6E-13 112.2 16.9 61 387-450 100-160 (397)
74 2wdq_A Succinate dehydrogenase 99.0 4.7E-09 1.6E-13 117.8 17.5 59 386-444 143-207 (588)
75 2qa1_A PGAE, polyketide oxygen 99.0 3.2E-09 1.1E-13 117.0 15.8 63 387-450 107-172 (500)
76 3alj_A 2-methyl-3-hydroxypyrid 99.0 6.1E-09 2.1E-13 110.6 17.4 61 387-451 108-168 (379)
77 2qa2_A CABE, polyketide oxygen 99.0 3.4E-09 1.2E-13 116.7 15.2 63 387-450 108-173 (499)
78 2qcu_A Aerobic glycerol-3-phos 99.0 2.6E-09 8.9E-14 117.9 14.1 58 386-444 149-211 (501)
79 1rp0_A ARA6, thiazole biosynth 99.0 3.5E-09 1.2E-13 107.8 13.4 57 387-443 120-191 (284)
80 2bry_A NEDD9 interacting prote 99.0 2.6E-10 8.9E-15 125.6 4.7 86 107-194 34-129 (497)
81 2bs2_A Quinol-fumarate reducta 99.0 1.2E-08 4.1E-13 115.6 18.0 59 386-444 158-221 (660)
82 2gmh_A Electron transfer flavo 98.9 1E-08 3.6E-13 115.0 16.5 62 386-447 144-221 (584)
83 2h88_A Succinate dehydrogenase 98.9 6.5E-09 2.2E-13 117.0 14.6 59 386-444 155-218 (621)
84 4a9w_A Monooxygenase; baeyer-v 98.9 6.2E-09 2.1E-13 108.9 12.5 56 387-443 77-132 (357)
85 2gjc_A Thiazole biosynthetic e 98.9 9.5E-09 3.3E-13 105.6 12.8 41 156-196 64-106 (326)
86 3c4n_A Uncharacterized protein 98.9 3.5E-09 1.2E-13 113.5 9.8 56 386-443 172-236 (405)
87 2xdo_A TETX2 protein; tetracyc 98.9 7.1E-09 2.4E-13 110.9 12.0 61 387-450 129-189 (398)
88 4ap3_A Steroid monooxygenase; 98.9 9.2E-09 3.2E-13 114.4 13.3 42 156-197 20-61 (549)
89 3jsk_A Cypbp37 protein; octame 98.9 2E-08 6.9E-13 103.7 14.6 40 157-196 79-120 (344)
90 3gwf_A Cyclohexanone monooxyge 98.9 6.6E-09 2.3E-13 115.4 11.7 57 387-443 88-147 (540)
91 2zxi_A TRNA uridine 5-carboxym 98.9 1E-08 3.5E-13 113.9 13.0 56 387-443 124-180 (637)
92 1k0i_A P-hydroxybenzoate hydro 98.9 9.7E-09 3.3E-13 109.5 12.4 64 387-450 104-170 (394)
93 1chu_A Protein (L-aspartate ox 98.9 9.7E-09 3.3E-13 114.1 12.7 58 387-444 139-209 (540)
94 3c96_A Flavin-containing monoo 98.8 1.4E-08 4.8E-13 109.0 13.3 62 387-450 108-176 (410)
95 1gte_A Dihydropyrimidine dehyd 98.8 1.2E-09 4E-14 130.5 5.2 90 107-196 129-227 (1025)
96 1kf6_A Fumarate reductase flav 98.8 5.8E-08 2E-12 109.2 18.5 60 386-445 134-199 (602)
97 4fk1_A Putative thioredoxin re 98.8 1.5E-08 5E-13 104.2 12.3 39 155-194 4-42 (304)
98 2cul_A Glucose-inhibited divis 98.8 2.2E-08 7.4E-13 98.7 12.6 56 387-443 69-125 (232)
99 2zbw_A Thioredoxin reductase; 98.8 1.9E-08 6.5E-13 104.6 12.3 52 390-442 69-120 (335)
100 3ces_A MNMG, tRNA uridine 5-ca 98.8 2.1E-08 7.1E-13 111.9 12.5 57 387-444 125-182 (651)
101 3o0h_A Glutathione reductase; 98.8 1.2E-07 4.1E-12 104.1 18.4 56 386-442 232-287 (484)
102 2e5v_A L-aspartate oxidase; ar 98.8 1E-07 3.5E-12 104.1 17.6 58 386-444 119-177 (472)
103 3ab1_A Ferredoxin--NADP reduct 98.8 2.1E-08 7E-13 105.6 11.5 54 389-442 77-130 (360)
104 1jnr_A Adenylylsulfate reducta 98.8 1.3E-07 4.5E-12 107.2 18.8 57 387-443 152-218 (643)
105 3lxd_A FAD-dependent pyridine 98.8 1.5E-07 5.2E-12 101.0 18.2 58 385-442 193-250 (415)
106 1w4x_A Phenylacetone monooxyge 98.8 3.9E-08 1.3E-12 109.5 13.7 43 155-197 14-56 (542)
107 3cp8_A TRNA uridine 5-carboxym 98.8 4.1E-08 1.4E-12 109.5 13.4 56 387-443 118-174 (641)
108 3f8d_A Thioredoxin reductase ( 98.7 3.6E-08 1.2E-12 101.6 11.8 51 390-442 74-124 (323)
109 3uox_A Otemo; baeyer-villiger 98.7 1.8E-08 6.1E-13 112.0 9.7 42 156-197 8-49 (545)
110 3lzw_A Ferredoxin--NADP reduct 98.7 2.2E-08 7.4E-13 103.8 9.8 53 388-441 69-121 (332)
111 3fg2_P Putative rubredoxin red 98.7 3.8E-07 1.3E-11 97.6 19.0 58 385-442 183-240 (404)
112 2ywl_A Thioredoxin reductase r 98.7 1.5E-07 5E-12 88.6 13.4 54 387-443 57-110 (180)
113 2weu_A Tryptophan 5-halogenase 98.7 7.7E-08 2.6E-12 106.4 13.1 59 386-445 173-232 (511)
114 2aqj_A Tryptophan halogenase, 98.7 1.1E-07 3.7E-12 105.9 12.9 59 386-445 165-224 (538)
115 3itj_A Thioredoxin reductase 1 98.7 9.4E-08 3.2E-12 99.2 11.6 53 388-442 86-141 (338)
116 2r0c_A REBC; flavin adenine di 98.6 1.3E-07 4.4E-12 105.4 13.3 60 387-450 139-203 (549)
117 4dna_A Probable glutathione re 98.6 3.8E-07 1.3E-11 99.4 16.7 57 386-443 211-268 (463)
118 2e4g_A Tryptophan halogenase; 98.6 1.9E-07 6.7E-12 104.0 14.2 58 387-445 195-254 (550)
119 2gv8_A Monooxygenase; FMO, FAD 98.6 2.3E-07 8E-12 100.7 14.2 42 156-197 5-48 (447)
120 3r9u_A Thioredoxin reductase; 98.6 6.7E-08 2.3E-12 99.2 9.4 48 394-441 191-242 (315)
121 3gyx_A Adenylylsulfate reducta 98.6 4.3E-07 1.5E-11 102.8 16.7 57 387-443 167-233 (662)
122 2q0l_A TRXR, thioredoxin reduc 98.6 3.6E-07 1.2E-11 93.7 14.4 50 392-443 65-114 (311)
123 2pyx_A Tryptophan halogenase; 98.6 2.8E-07 9.5E-12 102.3 13.8 63 387-450 176-241 (526)
124 3d1c_A Flavin-containing putat 98.6 1.5E-07 5.3E-12 99.0 11.1 55 387-443 89-143 (369)
125 1trb_A Thioredoxin reductase; 98.6 3.6E-07 1.2E-11 94.1 13.5 57 386-442 184-246 (320)
126 3fbs_A Oxidoreductase; structu 98.6 4.4E-07 1.5E-11 92.2 13.6 34 157-190 2-35 (297)
127 2q7v_A Thioredoxin reductase; 98.6 3.3E-07 1.1E-11 94.8 12.8 41 156-197 7-47 (325)
128 3cty_A Thioredoxin reductase; 98.6 5.6E-07 1.9E-11 92.8 14.2 40 156-196 15-54 (319)
129 3iwa_A FAD-dependent pyridine 98.5 6.3E-07 2.1E-11 98.0 14.8 57 385-442 201-257 (472)
130 1fec_A Trypanothione reductase 98.5 1.9E-07 6.6E-12 102.5 10.5 58 386-443 231-288 (490)
131 2dkh_A 3-hydroxybenzoate hydro 98.5 3.4E-07 1.2E-11 103.9 12.6 64 387-451 142-219 (639)
132 1ges_A Glutathione reductase; 98.5 1.3E-07 4.6E-12 102.6 8.4 58 386-443 208-265 (450)
133 3lad_A Dihydrolipoamide dehydr 98.5 2E-06 6.8E-11 94.1 17.8 57 386-443 221-280 (476)
134 2wpf_A Trypanothione reductase 98.5 2E-07 6.9E-12 102.5 9.4 58 386-443 235-292 (495)
135 1xdi_A RV3303C-LPDA; reductase 98.5 1E-06 3.4E-11 97.1 14.8 57 386-443 223-279 (499)
136 3fpz_A Thiazole biosynthetic e 98.5 7.8E-08 2.7E-12 99.8 5.5 42 156-197 64-107 (326)
137 2r9z_A Glutathione amide reduc 98.5 1.7E-06 5.7E-11 94.3 15.7 57 386-443 207-264 (463)
138 2a87_A TRXR, TR, thioredoxin r 98.5 8.2E-07 2.8E-11 92.3 12.3 40 155-195 12-51 (335)
139 3qvp_A Glucose oxidase; oxidor 98.5 1.1E-06 3.7E-11 98.0 13.9 53 394-446 235-296 (583)
140 3urh_A Dihydrolipoyl dehydroge 98.4 1.1E-06 3.9E-11 96.4 13.8 42 156-197 24-65 (491)
141 1y56_A Hypothetical protein PH 98.4 9.6E-07 3.3E-11 97.0 13.2 48 394-442 265-312 (493)
142 1vdc_A NTR, NADPH dependent th 98.4 6E-07 2.1E-11 93.0 11.0 52 389-443 73-124 (333)
143 1fl2_A Alkyl hydroperoxide red 98.4 7.5E-07 2.6E-11 91.3 11.5 51 392-442 62-114 (310)
144 4b1b_A TRXR, thioredoxin reduc 98.4 5.9E-07 2E-11 99.4 11.3 58 385-443 262-319 (542)
145 3s5w_A L-ornithine 5-monooxyge 98.4 9.4E-07 3.2E-11 96.3 12.7 39 156-194 29-72 (463)
146 1dxl_A Dihydrolipoamide dehydr 98.4 1.1E-06 3.9E-11 95.9 13.2 42 156-197 5-46 (470)
147 1hyu_A AHPF, alkyl hydroperoxi 98.4 1.3E-06 4.3E-11 96.7 13.3 53 391-443 272-326 (521)
148 2xve_A Flavin-containing monoo 98.4 1.6E-06 5.5E-11 94.4 13.5 40 158-197 3-48 (464)
149 2qae_A Lipoamide, dihydrolipoy 98.4 3.2E-06 1.1E-10 92.2 15.7 41 157-197 2-42 (468)
150 3ics_A Coenzyme A-disulfide re 98.4 1.4E-06 4.9E-11 97.9 12.9 54 386-442 228-281 (588)
151 3oc4_A Oxidoreductase, pyridin 98.4 3.5E-07 1.2E-11 99.4 7.0 56 386-443 189-244 (452)
152 2cdu_A NADPH oxidase; flavoenz 98.4 8.4E-07 2.9E-11 96.4 9.7 58 385-443 190-247 (452)
153 3h8l_A NADH oxidase; membrane 98.3 1.3E-06 4.6E-11 93.4 11.0 52 386-442 218-269 (409)
154 1n4w_A CHOD, cholesterol oxida 98.3 2.6E-06 8.8E-11 93.8 13.2 59 387-445 222-290 (504)
155 1ojt_A Surface protein; redox- 98.3 5E-06 1.7E-10 91.0 15.3 41 157-197 6-46 (482)
156 1v59_A Dihydrolipoamide dehydr 98.3 2.9E-06 1E-10 92.8 13.3 41 157-197 5-45 (478)
157 1ebd_A E3BD, dihydrolipoamide 98.3 1.8E-06 6.3E-11 93.7 11.3 40 157-197 3-42 (455)
158 4gcm_A TRXR, thioredoxin reduc 98.3 4E-07 1.4E-11 93.6 5.6 41 156-197 5-45 (312)
159 3q9t_A Choline dehydrogenase a 98.3 3.1E-06 1E-10 94.3 12.7 52 397-448 217-275 (577)
160 1pn0_A Phenol 2-monooxygenase; 98.2 5.4E-06 1.8E-10 94.3 13.2 36 157-192 8-48 (665)
161 3fim_B ARYL-alcohol oxidase; A 98.2 1.5E-06 5E-11 96.7 7.9 57 392-448 214-281 (566)
162 3t37_A Probable dehydrogenase; 98.2 1.2E-06 4.1E-11 97.1 7.2 53 398-450 223-278 (526)
163 3klj_A NAD(FAD)-dependent dehy 98.2 3.2E-06 1.1E-10 89.7 9.8 44 396-442 72-115 (385)
164 1coy_A Cholesterol oxidase; ox 98.2 9.5E-06 3.2E-10 89.3 13.1 59 387-445 227-295 (507)
165 1q1r_A Putidaredoxin reductase 98.1 6.8E-06 2.3E-10 88.6 10.5 44 396-442 70-113 (431)
166 4a5l_A Thioredoxin reductase; 98.1 1.2E-06 4.2E-11 89.8 4.4 35 156-190 3-37 (314)
167 4g6h_A Rotenone-insensitive NA 98.0 1.4E-05 4.8E-10 87.8 10.7 55 386-441 272-330 (502)
168 2jbv_A Choline oxidase; alcoho 98.0 3.1E-05 1.1E-09 85.9 13.5 56 389-444 211-274 (546)
169 2v3a_A Rubredoxin reductase; a 98.0 5.5E-05 1.9E-09 80.0 14.7 51 392-443 193-243 (384)
170 1o94_A Tmadh, trimethylamine d 98.0 4.7E-06 1.6E-10 95.9 6.6 43 155-197 387-429 (729)
171 3ef6_A Toluene 1,2-dioxygenase 98.0 8.8E-06 3E-10 87.1 7.9 44 396-442 67-110 (410)
172 3sx6_A Sulfide-quinone reducta 98.0 1.5E-05 5.3E-10 85.9 9.5 48 392-443 65-112 (437)
173 3cgb_A Pyridine nucleotide-dis 98.0 1.2E-05 4.2E-10 87.9 8.7 36 157-192 36-73 (480)
174 1q1r_A Putidaredoxin reductase 98.0 6.1E-05 2.1E-09 81.1 14.0 51 392-442 197-249 (431)
175 2yqu_A 2-oxoglutarate dehydrog 97.9 7.1E-05 2.4E-09 81.1 14.3 50 393-443 215-264 (455)
176 3k30_A Histamine dehydrogenase 97.9 7.3E-06 2.5E-10 93.8 6.5 44 154-197 388-431 (690)
177 3l8k_A Dihydrolipoyl dehydroge 97.9 4.6E-06 1.6E-10 90.9 4.0 41 157-197 4-44 (466)
178 3ef6_A Toluene 1,2-dioxygenase 97.9 4.7E-05 1.6E-09 81.3 11.5 50 392-442 191-240 (410)
179 1mo9_A ORF3; nucleotide bindin 97.9 9.6E-06 3.3E-10 89.7 6.1 57 386-442 255-315 (523)
180 3ntd_A FAD-dependent pyridine 97.9 1.6E-05 5.3E-10 88.9 7.8 35 158-192 2-38 (565)
181 1nhp_A NADH peroxidase; oxidor 97.8 0.0001 3.6E-09 79.6 12.8 50 392-443 197-246 (447)
182 3hyw_A Sulfide-quinone reducta 97.8 8.8E-06 3E-10 87.7 4.2 43 396-442 66-108 (430)
183 2eq6_A Pyruvate dehydrogenase 97.8 0.00016 5.5E-09 78.6 14.2 50 392-442 216-270 (464)
184 3qfa_A Thioredoxin reductase 1 97.8 1.3E-05 4.6E-10 88.4 5.7 43 155-197 30-80 (519)
185 3dgz_A Thioredoxin reductase 2 97.8 1.1E-05 3.9E-10 88.3 4.8 57 386-442 225-286 (488)
186 2gqw_A Ferredoxin reductase; f 97.8 0.00022 7.5E-09 76.1 14.5 46 392-442 193-238 (408)
187 2yqu_A 2-oxoglutarate dehydrog 97.8 1.2E-05 4.2E-10 87.2 4.7 41 157-197 1-41 (455)
188 1zmd_A Dihydrolipoyl dehydroge 97.8 1.1E-05 3.8E-10 88.0 4.3 57 386-442 220-281 (474)
189 3ic9_A Dihydrolipoamide dehydr 97.8 1.3E-05 4.3E-10 88.0 4.2 56 386-443 215-274 (492)
190 1zk7_A HGII, reductase, mercur 97.8 1.8E-05 6.2E-10 86.2 5.4 56 386-443 216-271 (467)
191 3dk9_A Grase, GR, glutathione 97.7 1.2E-05 4E-10 88.0 3.8 57 386-442 228-292 (478)
192 3ihm_A Styrene monooxygenase A 97.7 1.6E-05 5.6E-10 85.6 4.5 35 156-190 21-55 (430)
193 4b63_A L-ornithine N5 monooxyg 97.7 4E-05 1.4E-09 84.2 7.7 42 155-196 37-78 (501)
194 2hqm_A GR, grase, glutathione 97.7 1.6E-05 5.5E-10 86.9 4.3 57 386-442 226-284 (479)
195 3dgh_A TRXR-1, thioredoxin red 97.7 2.1E-05 7.3E-10 86.0 5.2 57 386-442 227-288 (483)
196 2hqm_A GR, grase, glutathione 97.7 0.00023 8E-09 77.6 13.1 36 157-192 185-220 (479)
197 1ebd_A E3BD, dihydrolipoamide 97.7 0.00026 9E-09 76.6 13.5 51 392-443 217-270 (455)
198 1lvl_A Dihydrolipoamide dehydr 97.7 1.9E-05 6.4E-10 85.8 4.1 55 386-443 212-268 (458)
199 1ps9_A 2,4-dienoyl-COA reducta 97.7 4.7E-05 1.6E-09 86.8 7.5 43 155-197 371-413 (671)
200 1onf_A GR, grase, glutathione 97.7 0.00029 9.9E-09 77.3 13.3 52 392-443 223-275 (500)
201 3c4a_A Probable tryptophan hyd 97.7 3.4E-05 1.2E-09 81.6 5.5 51 386-449 98-148 (381)
202 2bc0_A NADH oxidase; flavoprot 97.6 0.00028 9.5E-09 77.2 12.8 50 392-443 242-291 (490)
203 2a8x_A Dihydrolipoyl dehydroge 97.6 2.2E-05 7.5E-10 85.4 3.8 56 386-442 212-270 (464)
204 1onf_A GR, grase, glutathione 97.6 2.9E-05 1E-09 85.3 4.8 40 157-197 2-41 (500)
205 2e1m_C L-glutamate oxidase; L- 97.6 9.5E-06 3.3E-10 76.2 0.7 117 523-654 33-155 (181)
206 2eq6_A Pyruvate dehydrogenase 97.6 2.5E-05 8.5E-10 85.0 4.0 40 157-197 6-45 (464)
207 1v59_A Dihydrolipoamide dehydr 97.6 0.00031 1.1E-08 76.6 12.7 35 157-191 183-217 (478)
208 3pl8_A Pyranose 2-oxidase; sub 97.6 3.9E-05 1.3E-09 86.5 5.6 41 156-196 45-85 (623)
209 1ojt_A Surface protein; redox- 97.6 0.00032 1.1E-08 76.6 12.2 51 392-443 232-286 (482)
210 1mo9_A ORF3; nucleotide bindin 97.6 0.0004 1.4E-08 76.6 13.1 35 158-192 215-249 (523)
211 3ntd_A FAD-dependent pyridine 97.5 0.00081 2.8E-08 74.9 14.7 50 392-442 198-266 (565)
212 1m6i_A Programmed cell death p 97.5 0.00074 2.5E-08 73.9 13.9 50 392-442 232-281 (493)
213 3g5s_A Methylenetetrahydrofola 97.5 7.3E-05 2.5E-09 77.7 5.4 37 158-194 2-38 (443)
214 1zmd_A Dihydrolipoyl dehydroge 97.5 0.00059 2E-08 74.2 13.0 35 158-192 179-213 (474)
215 2a8x_A Dihydrolipoyl dehydroge 97.5 0.00066 2.3E-08 73.6 13.3 36 157-192 171-206 (464)
216 1lvl_A Dihydrolipoamide dehydr 97.5 0.00051 1.8E-08 74.4 12.2 36 157-192 171-206 (458)
217 3cgb_A Pyridine nucleotide-dis 97.5 0.00066 2.2E-08 74.0 13.0 50 392-443 233-282 (480)
218 2qae_A Lipoamide, dihydrolipoy 97.5 0.00083 2.8E-08 72.9 13.4 51 392-443 221-276 (468)
219 2gag_A Heterotetrameric sarcos 97.4 7.3E-05 2.5E-09 88.6 4.9 41 157-197 128-168 (965)
220 2x8g_A Thioredoxin glutathione 97.4 7.7E-05 2.6E-09 83.9 4.7 57 386-442 326-394 (598)
221 1lqt_A FPRA; NADP+ derivative, 97.4 8.2E-05 2.8E-09 80.6 4.8 41 157-197 3-50 (456)
222 1zk7_A HGII, reductase, mercur 97.4 0.0011 3.8E-08 71.9 13.8 35 157-191 176-210 (467)
223 3urh_A Dihydrolipoyl dehydroge 97.4 0.0014 4.7E-08 71.7 13.8 50 392-442 245-299 (491)
224 1dxl_A Dihydrolipoamide dehydr 97.4 0.00064 2.2E-08 73.8 11.1 51 392-443 224-279 (470)
225 1xhc_A NADH oxidase /nitrite r 97.4 0.00043 1.5E-08 72.7 9.4 34 158-191 144-177 (367)
226 3dgh_A TRXR-1, thioredoxin red 97.3 0.0011 3.8E-08 72.3 12.6 33 157-189 187-219 (483)
227 3kd9_A Coenzyme A disulfide re 97.3 0.00015 5.2E-09 78.4 5.4 54 386-442 190-243 (449)
228 1cjc_A Protein (adrenodoxin re 97.3 0.00016 5.4E-09 78.4 5.3 42 156-197 5-48 (460)
229 1kdg_A CDH, cellobiose dehydro 97.3 0.00015 5.2E-09 80.5 5.3 57 389-445 198-263 (546)
230 3ic9_A Dihydrolipoamide dehydr 97.3 0.0016 5.5E-08 71.2 13.1 36 157-192 174-209 (492)
231 3itj_A Thioredoxin reductase 1 97.3 0.00092 3.2E-08 68.7 10.3 43 399-441 222-269 (338)
232 3uox_A Otemo; baeyer-villiger 97.2 0.0045 1.5E-07 68.5 16.3 36 156-191 184-219 (545)
233 3h28_A Sulfide-quinone reducta 97.2 0.00016 5.6E-09 77.6 4.5 53 384-441 198-254 (430)
234 3ab1_A Ferredoxin--NADP reduct 97.2 0.0014 4.8E-08 68.2 11.4 47 396-442 212-262 (360)
235 3gwf_A Cyclohexanone monooxyge 97.2 0.0053 1.8E-07 67.8 16.0 36 156-191 177-212 (540)
236 3cty_A Thioredoxin reductase; 97.2 0.0015 5.1E-08 66.8 10.7 45 397-441 201-250 (319)
237 2gqw_A Ferredoxin reductase; f 97.2 0.00031 1.1E-08 74.9 5.5 43 397-442 70-112 (408)
238 3dgz_A Thioredoxin reductase 2 97.2 0.0024 8.1E-08 69.7 12.6 33 158-190 186-218 (488)
239 2zbw_A Thioredoxin reductase; 97.1 0.0022 7.6E-08 65.9 11.7 48 394-442 199-251 (335)
240 3dk9_A Grase, GR, glutathione 97.1 0.003 1E-07 68.7 13.3 35 157-191 187-221 (478)
241 1nhp_A NADH peroxidase; oxidor 97.1 0.0003 1E-08 75.9 5.3 36 158-193 1-38 (447)
242 2bc0_A NADH oxidase; flavoprot 97.1 0.00032 1.1E-08 76.8 5.4 36 157-192 35-73 (490)
243 2q0l_A TRXR, thioredoxin reduc 97.1 0.0031 1.1E-07 64.0 12.4 44 398-441 191-239 (311)
244 4eqs_A Coenzyme A disulfide re 97.1 0.0019 6.5E-08 69.4 11.0 46 392-442 194-239 (437)
245 1m6i_A Programmed cell death p 97.1 0.00038 1.3E-08 76.2 5.4 39 155-193 9-49 (493)
246 1ju2_A HydroxynitrIle lyase; f 97.1 0.00021 7.2E-09 79.0 3.3 54 392-445 200-263 (536)
247 1fl2_A Alkyl hydroperoxide red 97.0 0.0027 9.3E-08 64.4 11.0 43 399-441 193-240 (310)
248 2v3a_A Rubredoxin reductase; a 97.0 0.00039 1.3E-08 73.4 4.7 34 157-190 4-39 (384)
249 3d1c_A Flavin-containing putat 97.0 0.0038 1.3E-07 65.0 12.2 50 392-442 220-271 (369)
250 1xhc_A NADH oxidase /nitrite r 97.0 0.00042 1.4E-08 72.8 4.4 51 386-442 183-233 (367)
251 3s5w_A L-ornithine 5-monooxyge 96.9 0.008 2.7E-07 64.9 14.4 36 156-191 226-263 (463)
252 4ap3_A Steroid monooxygenase; 96.9 0.0098 3.4E-07 65.7 15.1 35 157-191 191-225 (549)
253 4eqs_A Coenzyme A disulfide re 96.9 0.00073 2.5E-08 72.7 5.1 35 158-192 1-37 (437)
254 3kd9_A Coenzyme A disulfide re 96.8 0.0049 1.7E-07 66.4 11.2 36 157-192 148-183 (449)
255 2x8g_A Thioredoxin glutathione 96.8 0.01 3.4E-07 66.5 14.0 32 158-189 287-318 (598)
256 3vrd_B FCCB subunit, flavocyto 96.8 0.00093 3.2E-08 70.8 5.1 49 392-441 208-256 (401)
257 2q7v_A Thioredoxin reductase; 96.7 0.0072 2.5E-07 61.7 11.5 34 157-190 152-185 (325)
258 3k30_A Histamine dehydrogenase 96.7 0.0025 8.6E-08 72.7 8.5 35 157-191 523-559 (690)
259 1vdc_A NTR, NADPH dependent th 96.7 0.0061 2.1E-07 62.5 10.4 34 157-190 159-192 (333)
260 3f8d_A Thioredoxin reductase ( 96.7 0.0089 3E-07 60.7 11.4 34 157-190 154-187 (323)
261 3qfa_A Thioredoxin reductase 1 96.6 0.018 6.1E-07 63.2 14.2 32 158-189 211-242 (519)
262 1hyu_A AHPF, alkyl hydroperoxi 96.6 0.0074 2.5E-07 66.3 10.7 43 399-441 404-451 (521)
263 3l8k_A Dihydrolipoyl dehydroge 96.5 0.015 5.1E-07 62.9 12.7 35 157-191 172-206 (466)
264 1gpe_A Protein (glucose oxidas 96.5 0.0015 5.2E-08 72.9 4.9 51 395-445 240-299 (587)
265 3lzw_A Ferredoxin--NADP reduct 96.5 0.0061 2.1E-07 62.2 8.7 34 157-190 154-187 (332)
266 2gag_A Heterotetrameric sarcos 95.8 0.018 6.1E-07 68.2 9.1 33 158-190 285-317 (965)
267 1gte_A Dihydropyrimidine dehyd 95.3 0.092 3.2E-06 62.5 12.8 33 158-190 333-366 (1025)
268 1o94_A Tmadh, trimethylamine d 95.1 0.028 9.5E-07 64.4 7.4 34 157-190 528-563 (729)
269 2g1u_A Hypothetical protein TM 95.1 0.025 8.6E-07 51.0 5.5 36 156-191 18-53 (155)
270 1w4x_A Phenylacetone monooxyge 95.0 0.61 2.1E-05 51.1 17.8 34 157-190 186-219 (542)
271 3fwz_A Inner membrane protein 94.7 0.044 1.5E-06 48.5 5.9 35 157-191 7-41 (140)
272 1lss_A TRK system potassium up 94.5 0.038 1.3E-06 48.4 5.1 33 158-190 5-37 (140)
273 3llv_A Exopolyphosphatase-rela 94.3 0.039 1.3E-06 48.7 4.7 33 158-190 7-39 (141)
274 3dfz_A SIRC, precorrin-2 dehyd 94.2 0.32 1.1E-05 46.6 11.1 127 156-284 30-177 (223)
275 3klj_A NAD(FAD)-dependent dehy 94.2 0.039 1.3E-06 58.0 5.1 35 158-192 147-181 (385)
276 4gcm_A TRXR, thioredoxin reduc 94.1 0.038 1.3E-06 56.0 4.8 34 158-191 146-179 (312)
277 3ic5_A Putative saccharopine d 94.0 0.057 1.9E-06 45.6 4.9 34 157-190 5-39 (118)
278 3ado_A Lambda-crystallin; L-gu 93.6 0.048 1.7E-06 55.4 4.4 34 157-190 6-39 (319)
279 1id1_A Putative potassium chan 93.4 0.086 2.9E-06 47.2 5.4 33 157-189 3-35 (153)
280 1kdg_A CDH, cellobiose dehydro 93.2 0.16 5.5E-06 55.9 8.1 37 156-192 6-42 (546)
281 4a5l_A Thioredoxin reductase; 93.1 0.068 2.3E-06 53.9 4.6 34 157-190 152-185 (314)
282 2x5o_A UDP-N-acetylmuramoylala 92.8 0.058 2E-06 57.8 3.7 37 158-194 6-42 (439)
283 3c85_A Putative glutathione-re 92.8 0.11 3.9E-06 48.0 5.3 34 157-190 39-73 (183)
284 1f0y_A HCDH, L-3-hydroxyacyl-C 92.8 0.11 3.6E-06 52.6 5.5 34 157-190 15-48 (302)
285 1ges_A Glutathione reductase; 92.7 0.11 3.7E-06 55.8 5.7 36 157-192 167-202 (450)
286 3lk7_A UDP-N-acetylmuramoylala 92.7 0.12 4.1E-06 55.5 5.9 34 157-190 9-42 (451)
287 2hmt_A YUAA protein; RCK, KTN, 92.5 0.1 3.6E-06 45.6 4.5 33 158-190 7-39 (144)
288 2e1m_B L-glutamate oxidase; L- 92.5 0.14 4.8E-06 44.5 5.0 57 428-486 4-60 (130)
289 2dpo_A L-gulonate 3-dehydrogen 92.1 0.1 3.6E-06 53.1 4.4 34 157-190 6-39 (319)
290 4e12_A Diketoreductase; oxidor 92.1 0.13 4.6E-06 51.3 5.1 33 158-190 5-37 (283)
291 2r9z_A Glutathione amide reduc 92.0 0.13 4.5E-06 55.4 5.2 35 158-192 167-201 (463)
292 1zej_A HBD-9, 3-hydroxyacyl-CO 91.6 0.13 4.6E-06 51.5 4.5 34 156-190 11-44 (293)
293 3i83_A 2-dehydropantoate 2-red 91.4 0.17 5.9E-06 51.5 5.1 33 158-190 3-35 (320)
294 3l4b_C TRKA K+ channel protien 91.2 0.14 4.6E-06 49.0 3.9 32 159-190 2-33 (218)
295 3k6j_A Protein F01G10.3, confi 91.2 0.26 8.9E-06 52.6 6.4 35 157-191 54-88 (460)
296 2y0c_A BCEC, UDP-glucose dehyd 91.1 0.18 6.3E-06 54.3 5.2 34 157-190 8-41 (478)
297 3doj_A AT3G25530, dehydrogenas 91.0 0.23 7.7E-06 50.3 5.5 37 155-191 19-55 (310)
298 1pzg_A LDH, lactate dehydrogen 91.0 0.24 8.2E-06 50.7 5.7 34 157-190 9-43 (331)
299 2raf_A Putative dinucleotide-b 90.9 0.23 7.9E-06 47.1 5.1 35 157-191 19-53 (209)
300 3hn2_A 2-dehydropantoate 2-red 90.9 0.18 6.2E-06 51.1 4.7 33 158-190 3-35 (312)
301 1ks9_A KPA reductase;, 2-dehyd 90.8 0.22 7.5E-06 49.6 5.2 33 159-191 2-34 (291)
302 4a7p_A UDP-glucose dehydrogena 90.7 0.23 7.8E-06 53.0 5.5 35 157-191 8-42 (446)
303 4dio_A NAD(P) transhydrogenase 90.4 0.26 8.8E-06 51.6 5.3 34 157-190 190-223 (405)
304 2ew2_A 2-dehydropantoate 2-red 90.3 0.23 7.9E-06 50.0 4.9 33 158-190 4-36 (316)
305 3vtf_A UDP-glucose 6-dehydroge 90.3 0.27 9.2E-06 52.2 5.4 37 154-190 18-54 (444)
306 3lxd_A FAD-dependent pyridine 90.1 0.3 1E-05 51.6 5.8 36 157-192 152-187 (415)
307 3eag_A UDP-N-acetylmuramate:L- 90.1 0.3 1E-05 49.9 5.5 34 157-190 4-38 (326)
308 2cdu_A NADPH oxidase; flavoenz 90.1 0.26 8.9E-06 52.7 5.3 36 157-192 149-184 (452)
309 3ghy_A Ketopantoate reductase 89.9 0.27 9.1E-06 50.4 5.0 32 158-189 4-35 (335)
310 3p2y_A Alanine dehydrogenase/p 89.9 0.27 9.2E-06 51.0 5.0 34 157-190 184-217 (381)
311 3g79_A NDP-N-acetyl-D-galactos 89.9 0.29 1E-05 52.6 5.4 34 158-191 19-54 (478)
312 1lld_A L-lactate dehydrogenase 89.9 0.28 9.5E-06 49.8 5.1 34 157-190 7-42 (319)
313 3k96_A Glycerol-3-phosphate de 89.8 0.26 9E-06 50.9 4.9 34 157-190 29-62 (356)
314 2xve_A Flavin-containing monoo 89.8 0.29 9.9E-06 52.6 5.4 35 157-191 197-231 (464)
315 3fg2_P Putative rubredoxin red 89.6 0.35 1.2E-05 50.9 5.7 37 157-193 142-178 (404)
316 2ewd_A Lactate dehydrogenase,; 89.6 0.34 1.2E-05 49.2 5.4 34 157-190 4-38 (317)
317 1kyq_A Met8P, siroheme biosynt 89.5 0.21 7.2E-06 49.4 3.7 34 157-190 13-46 (274)
318 1zcj_A Peroxisomal bifunctiona 89.4 0.29 1E-05 52.6 5.0 34 157-190 37-70 (463)
319 3gg2_A Sugar dehydrogenase, UD 89.4 0.29 1E-05 52.3 4.9 33 158-190 3-35 (450)
320 3dtt_A NADP oxidoreductase; st 89.4 0.36 1.2E-05 47.0 5.2 35 156-190 18-52 (245)
321 1pjq_A CYSG, siroheme synthase 89.3 2.1 7.2E-05 45.7 11.7 128 157-285 12-160 (457)
322 4b1b_A TRXR, thioredoxin reduc 89.3 0.36 1.2E-05 53.0 5.7 36 157-192 223-258 (542)
323 3g0o_A 3-hydroxyisobutyrate de 89.2 0.34 1.1E-05 48.9 5.1 34 157-190 7-40 (303)
324 3g17_A Similar to 2-dehydropan 89.1 0.25 8.6E-06 49.6 4.0 33 158-190 3-35 (294)
325 2a87_A TRXR, TR, thioredoxin r 89.1 0.31 1.1E-05 49.7 4.7 35 157-191 155-189 (335)
326 3pef_A 6-phosphogluconate dehy 89.0 0.36 1.2E-05 48.1 5.1 34 158-191 2-35 (287)
327 3oc4_A Oxidoreductase, pyridin 88.9 0.38 1.3E-05 51.4 5.5 36 157-192 147-182 (452)
328 1z82_A Glycerol-3-phosphate de 88.9 0.36 1.2E-05 49.4 5.1 33 157-189 14-46 (335)
329 4dll_A 2-hydroxy-3-oxopropiona 88.7 0.41 1.4E-05 48.6 5.3 34 157-190 31-64 (320)
330 2hjr_A Malate dehydrogenase; m 88.6 0.44 1.5E-05 48.6 5.4 33 158-190 15-48 (328)
331 2wpf_A Trypanothione reductase 88.4 0.38 1.3E-05 52.2 5.1 36 157-192 191-229 (495)
332 3lad_A Dihydrolipoamide dehydr 88.4 0.47 1.6E-05 51.1 5.9 36 157-192 180-215 (476)
333 1bg6_A N-(1-D-carboxylethyl)-L 88.4 0.4 1.4E-05 49.3 5.1 33 158-190 5-37 (359)
334 3pdu_A 3-hydroxyisobutyrate de 88.4 0.36 1.2E-05 48.1 4.5 34 158-191 2-35 (287)
335 3oj0_A Glutr, glutamyl-tRNA re 88.3 0.18 6.3E-06 44.5 2.1 34 157-190 21-54 (144)
336 1jw9_B Molybdopterin biosynthe 88.3 0.39 1.3E-05 46.9 4.7 34 157-190 31-65 (249)
337 3hwr_A 2-dehydropantoate 2-red 88.3 0.37 1.3E-05 49.0 4.6 32 157-189 19-50 (318)
338 1mv8_A GMD, GDP-mannose 6-dehy 88.2 0.38 1.3E-05 51.3 4.8 32 159-190 2-33 (436)
339 1fec_A Trypanothione reductase 88.2 0.42 1.4E-05 51.8 5.3 36 157-192 187-225 (490)
340 2vns_A Metalloreductase steap3 88.2 0.46 1.6E-05 45.2 5.0 34 157-190 28-61 (215)
341 3pid_A UDP-glucose 6-dehydroge 88.0 0.36 1.2E-05 51.1 4.4 34 157-191 36-69 (432)
342 3qha_A Putative oxidoreductase 87.9 0.36 1.2E-05 48.5 4.2 35 157-191 15-49 (296)
343 3l6d_A Putative oxidoreductase 87.7 0.6 2.1E-05 47.1 5.8 34 157-190 9-42 (306)
344 2gv8_A Monooxygenase; FMO, FAD 87.7 0.36 1.2E-05 51.5 4.3 36 157-192 212-248 (447)
345 3mog_A Probable 3-hydroxybutyr 87.7 0.38 1.3E-05 51.9 4.4 33 158-190 6-38 (483)
346 2h78_A Hibadh, 3-hydroxyisobut 87.7 0.48 1.6E-05 47.6 5.0 33 158-190 4-36 (302)
347 3fbs_A Oxidoreductase; structu 87.7 0.61 2.1E-05 46.1 5.8 47 390-441 178-224 (297)
348 1x13_A NAD(P) transhydrogenase 87.6 0.49 1.7E-05 49.7 5.2 34 157-190 172-205 (401)
349 3ics_A Coenzyme A-disulfide re 87.5 0.52 1.8E-05 52.3 5.6 36 157-192 187-222 (588)
350 1nyt_A Shikimate 5-dehydrogena 87.4 0.56 1.9E-05 46.4 5.2 34 157-190 119-152 (271)
351 3tl2_A Malate dehydrogenase; c 87.4 0.61 2.1E-05 47.2 5.5 33 157-189 8-41 (315)
352 1t2d_A LDH-P, L-lactate dehydr 87.4 0.63 2.1E-05 47.3 5.6 34 157-190 4-38 (322)
353 2vdc_G Glutamate synthase [NAD 87.4 0.54 1.8E-05 50.4 5.4 36 156-191 263-299 (456)
354 1txg_A Glycerol-3-phosphate de 87.3 0.46 1.6E-05 48.4 4.7 30 159-188 2-31 (335)
355 3phh_A Shikimate dehydrogenase 87.3 0.61 2.1E-05 46.0 5.3 35 157-191 118-152 (269)
356 3ego_A Probable 2-dehydropanto 87.3 0.5 1.7E-05 47.7 4.8 32 158-190 3-34 (307)
357 1l7d_A Nicotinamide nucleotide 87.2 0.56 1.9E-05 49.0 5.3 34 157-190 172-205 (384)
358 3dfu_A Uncharacterized protein 87.2 0.25 8.4E-06 47.6 2.3 35 156-190 5-39 (232)
359 2v6b_A L-LDH, L-lactate dehydr 87.2 0.53 1.8E-05 47.4 5.0 32 159-190 2-35 (304)
360 2uyy_A N-PAC protein; long-cha 87.1 0.66 2.3E-05 46.9 5.6 34 157-190 30-63 (316)
361 4e21_A 6-phosphogluconate dehy 87.0 0.55 1.9E-05 48.5 5.1 34 157-190 22-55 (358)
362 4g65_A TRK system potassium up 87.0 0.26 8.8E-06 53.0 2.6 35 157-191 3-37 (461)
363 3qsg_A NAD-binding phosphogluc 87.0 0.5 1.7E-05 47.8 4.7 33 157-189 24-57 (312)
364 2pv7_A T-protein [includes: ch 87.0 0.68 2.3E-05 46.5 5.6 33 158-190 22-55 (298)
365 1pjc_A Protein (L-alanine dehy 86.9 0.62 2.1E-05 48.2 5.4 33 158-190 168-200 (361)
366 1xdi_A RV3303C-LPDA; reductase 86.9 0.54 1.9E-05 50.9 5.2 36 157-192 182-217 (499)
367 2qyt_A 2-dehydropantoate 2-red 86.8 0.44 1.5E-05 48.1 4.1 31 158-188 9-45 (317)
368 3iwa_A FAD-dependent pyridine 86.5 0.64 2.2E-05 50.0 5.4 36 157-192 159-195 (472)
369 3gvi_A Malate dehydrogenase; N 86.4 0.7 2.4E-05 47.0 5.4 34 157-190 7-41 (324)
370 3ojo_A CAP5O; rossmann fold, c 86.3 0.51 1.8E-05 50.0 4.4 35 157-191 11-45 (431)
371 3l9w_A Glutathione-regulated p 86.2 0.63 2.1E-05 49.1 5.1 35 157-191 4-38 (413)
372 3h28_A Sulfide-quinone reducta 86.2 0.46 1.6E-05 50.4 4.1 37 158-194 3-41 (430)
373 1ju2_A HydroxynitrIle lyase; f 86.1 0.42 1.4E-05 52.4 3.8 37 156-193 25-61 (536)
374 3r9u_A Thioredoxin reductase; 86.1 0.66 2.3E-05 46.3 5.0 36 157-192 147-182 (315)
375 1jay_A Coenzyme F420H2:NADP+ o 86.0 0.68 2.3E-05 43.6 4.8 31 159-189 2-33 (212)
376 4ezb_A Uncharacterized conserv 85.9 0.62 2.1E-05 47.3 4.7 33 158-190 25-58 (317)
377 2a9f_A Putative malic enzyme ( 85.8 0.72 2.5E-05 47.8 5.1 35 156-190 187-222 (398)
378 4ffl_A PYLC; amino acid, biosy 85.8 0.8 2.7E-05 47.3 5.6 34 158-191 2-35 (363)
379 1p77_A Shikimate 5-dehydrogena 85.8 0.59 2E-05 46.3 4.3 34 157-190 119-152 (272)
380 2eez_A Alanine dehydrogenase; 85.7 0.76 2.6E-05 47.7 5.4 34 157-190 166-199 (369)
381 1guz_A Malate dehydrogenase; o 85.7 0.76 2.6E-05 46.4 5.2 32 159-190 2-35 (310)
382 1trb_A Thioredoxin reductase; 85.6 1.3 4.4E-05 44.4 7.0 53 387-442 63-115 (320)
383 2egg_A AROE, shikimate 5-dehyd 85.5 0.72 2.5E-05 46.3 4.9 34 157-190 141-175 (297)
384 1vl6_A Malate oxidoreductase; 85.4 0.77 2.6E-05 47.5 5.1 34 156-189 191-225 (388)
385 4gbj_A 6-phosphogluconate dehy 85.4 0.65 2.2E-05 46.6 4.5 34 158-191 6-39 (297)
386 1evy_A Glycerol-3-phosphate de 85.4 0.5 1.7E-05 48.9 3.8 32 159-190 17-48 (366)
387 2q3e_A UDP-glucose 6-dehydroge 85.3 0.72 2.5E-05 49.6 5.1 33 158-190 6-40 (467)
388 3vrd_B FCCB subunit, flavocyto 85.3 0.38 1.3E-05 50.4 2.8 35 157-191 2-38 (401)
389 2wtb_A MFP2, fatty acid multif 85.3 0.71 2.4E-05 52.5 5.2 34 157-190 312-345 (725)
390 4dna_A Probable glutathione re 85.2 0.87 3E-05 48.8 5.7 36 157-192 170-205 (463)
391 3o0h_A Glutathione reductase; 85.2 0.8 2.7E-05 49.4 5.4 36 157-192 191-226 (484)
392 1dlj_A UDP-glucose dehydrogena 85.1 0.55 1.9E-05 49.4 4.0 31 159-190 2-32 (402)
393 3ggo_A Prephenate dehydrogenas 85.1 0.97 3.3E-05 45.7 5.6 34 157-190 33-68 (314)
394 4huj_A Uncharacterized protein 85.0 0.44 1.5E-05 45.5 2.9 34 157-190 23-57 (220)
395 4gwg_A 6-phosphogluconate dehy 85.0 0.8 2.7E-05 49.3 5.2 34 157-190 4-37 (484)
396 2zyd_A 6-phosphogluconate dehy 85.0 0.67 2.3E-05 49.9 4.6 35 156-190 14-48 (480)
397 2vhw_A Alanine dehydrogenase; 84.9 0.88 3E-05 47.4 5.4 34 157-190 168-201 (377)
398 3pqe_A L-LDH, L-lactate dehydr 84.9 0.87 3E-05 46.3 5.2 34 157-190 5-40 (326)
399 1yqg_A Pyrroline-5-carboxylate 84.8 0.78 2.7E-05 44.9 4.7 32 159-190 2-34 (263)
400 2o3j_A UDP-glucose 6-dehydroge 84.7 0.79 2.7E-05 49.4 5.0 33 158-190 10-44 (481)
401 1a5z_A L-lactate dehydrogenase 84.7 0.77 2.6E-05 46.6 4.7 32 159-190 2-35 (319)
402 3ktd_A Prephenate dehydrogenas 84.6 0.91 3.1E-05 46.5 5.2 34 157-190 8-41 (341)
403 3cky_A 2-hydroxymethyl glutara 84.5 0.88 3E-05 45.5 5.0 34 157-190 4-37 (301)
404 2f1k_A Prephenate dehydrogenas 84.5 0.88 3E-05 45.0 4.9 32 159-190 2-33 (279)
405 1ur5_A Malate dehydrogenase; o 84.3 0.97 3.3E-05 45.6 5.2 33 158-190 3-36 (309)
406 2p4q_A 6-phosphogluconate dehy 84.2 0.89 3.1E-05 49.2 5.2 34 157-190 10-43 (497)
407 1y6j_A L-lactate dehydrogenase 84.0 0.98 3.4E-05 45.8 5.1 34 157-190 7-42 (318)
408 3tnl_A Shikimate dehydrogenase 84.0 1.1 3.7E-05 45.3 5.4 34 156-189 153-187 (315)
409 3c24_A Putative oxidoreductase 84.0 1.1 3.9E-05 44.4 5.5 33 158-190 12-45 (286)
410 2gf2_A Hibadh, 3-hydroxyisobut 83.9 0.9 3.1E-05 45.3 4.8 32 159-190 2-33 (296)
411 3fpz_A Thiazole biosynthetic e 83.7 0.56 1.9E-05 47.6 3.1 38 614-651 280-324 (326)
412 3fbt_A Chorismate mutase and s 83.6 1.1 3.8E-05 44.5 5.2 35 156-190 121-156 (282)
413 1vpd_A Tartronate semialdehyde 83.5 0.97 3.3E-05 45.1 4.8 33 158-190 6-38 (299)
414 2rir_A Dipicolinate synthase, 83.5 1.1 3.9E-05 44.8 5.4 35 156-190 156-190 (300)
415 3ldh_A Lactate dehydrogenase; 83.5 1.3 4.4E-05 45.0 5.7 35 156-190 20-56 (330)
416 1x0v_A GPD-C, GPDH-C, glycerol 83.4 0.68 2.3E-05 47.6 3.7 34 158-191 9-49 (354)
417 2hk9_A Shikimate dehydrogenase 83.4 0.94 3.2E-05 44.8 4.6 34 157-190 129-162 (275)
418 3p7m_A Malate dehydrogenase; p 83.4 1.2 4.2E-05 45.1 5.5 34 157-190 5-39 (321)
419 2i6t_A Ubiquitin-conjugating e 83.4 0.99 3.4E-05 45.4 4.8 34 157-190 14-49 (303)
420 3d4o_A Dipicolinate synthase s 83.4 1.2 4E-05 44.6 5.4 35 156-190 154-188 (293)
421 1yj8_A Glycerol-3-phosphate de 83.3 0.77 2.6E-05 47.7 4.1 34 158-191 22-62 (375)
422 1hyh_A L-hicdh, L-2-hydroxyiso 83.3 0.94 3.2E-05 45.7 4.6 33 158-190 2-36 (309)
423 3gpi_A NAD-dependent epimerase 83.3 1.2 4.2E-05 43.9 5.4 34 158-191 4-37 (286)
424 3jyo_A Quinate/shikimate dehyd 83.2 1.2 4.1E-05 44.3 5.2 35 156-190 126-161 (283)
425 3don_A Shikimate dehydrogenase 83.1 0.74 2.5E-05 45.7 3.6 35 157-191 117-152 (277)
426 2izz_A Pyrroline-5-carboxylate 83.1 0.94 3.2E-05 46.0 4.6 34 157-190 22-59 (322)
427 2g5c_A Prephenate dehydrogenas 83.0 1.1 3.9E-05 44.2 5.1 32 159-190 3-36 (281)
428 3u62_A Shikimate dehydrogenase 83.0 1.2 4.2E-05 43.4 5.1 32 159-190 110-142 (253)
429 2rcy_A Pyrroline carboxylate r 83.0 1 3.5E-05 43.9 4.7 34 158-191 5-42 (262)
430 1wdk_A Fatty oxidation complex 83.0 0.91 3.1E-05 51.5 4.8 34 157-190 314-347 (715)
431 3e8x_A Putative NAD-dependent 83.0 1.2 4.3E-05 42.4 5.2 35 156-190 20-55 (236)
432 2pgd_A 6-phosphogluconate dehy 82.9 1 3.6E-05 48.5 5.0 33 158-190 3-35 (482)
433 3pwz_A Shikimate dehydrogenase 82.8 1.3 4.3E-05 43.9 5.2 35 156-190 119-154 (272)
434 1ldn_A L-lactate dehydrogenase 82.6 1.3 4.6E-05 44.7 5.4 34 157-190 6-41 (316)
435 3obb_A Probable 3-hydroxyisobu 82.6 1.2 4E-05 44.8 5.0 33 158-190 4-36 (300)
436 1oju_A MDH, malate dehydrogena 82.5 0.98 3.3E-05 45.2 4.3 32 159-190 2-35 (294)
437 3ond_A Adenosylhomocysteinase; 82.4 1.2 4.2E-05 47.5 5.2 35 156-190 264-298 (488)
438 3hyw_A Sulfide-quinone reducta 82.3 2 6.7E-05 45.5 6.9 54 385-441 199-254 (430)
439 3o8q_A Shikimate 5-dehydrogena 82.3 1.3 4.4E-05 44.0 5.1 35 156-190 125-160 (281)
440 3ius_A Uncharacterized conserv 82.2 1.1 3.9E-05 44.1 4.7 33 158-190 6-38 (286)
441 1gpe_A Protein (glucose oxidas 82.2 1.1 3.9E-05 49.5 5.1 37 156-192 23-60 (587)
442 3ew7_A LMO0794 protein; Q8Y8U8 82.1 1.4 4.9E-05 41.3 5.2 32 159-190 2-34 (221)
443 3rui_A Ubiquitin-like modifier 81.9 1.3 4.5E-05 45.1 5.0 35 157-191 34-69 (340)
444 3t4e_A Quinate/shikimate dehyd 81.9 1.5 5E-05 44.3 5.4 34 156-189 147-181 (312)
445 1pgj_A 6PGDH, 6-PGDH, 6-phosph 81.8 1.1 3.9E-05 48.1 4.8 33 158-190 2-34 (478)
446 3zwc_A Peroxisomal bifunctiona 81.8 1.2 4.2E-05 50.5 5.2 34 157-190 316-349 (742)
447 1zud_1 Adenylyltransferase THI 81.8 1.2 4.2E-05 43.3 4.7 34 157-190 28-62 (251)
448 2cvz_A Dehydrogenase, 3-hydrox 81.7 1.1 3.7E-05 44.4 4.4 31 159-190 3-33 (289)
449 1edz_A 5,10-methylenetetrahydr 81.7 1.3 4.4E-05 44.7 4.8 34 156-189 176-210 (320)
450 3pl8_A Pyranose 2-oxidase; sub 81.7 1.1 3.7E-05 50.1 4.8 49 398-446 272-327 (623)
451 3tri_A Pyrroline-5-carboxylate 81.5 1.4 4.9E-05 43.7 5.1 33 158-190 4-39 (280)
452 3gt0_A Pyrroline-5-carboxylate 81.5 1.4 4.7E-05 42.8 4.9 33 158-190 3-39 (247)
453 3vku_A L-LDH, L-lactate dehydr 81.3 1.4 4.9E-05 44.7 5.1 34 156-189 8-43 (326)
454 4aj2_A L-lactate dehydrogenase 81.3 1.6 5.5E-05 44.4 5.5 35 156-190 18-54 (331)
455 2qrj_A Saccharopine dehydrogen 81.3 1.1 3.9E-05 46.4 4.3 39 157-195 214-257 (394)
456 4a9w_A Monooxygenase; baeyer-v 81.0 1.1 3.8E-05 45.4 4.3 33 157-190 163-195 (357)
457 3c7a_A Octopine dehydrogenase; 81.0 0.83 2.8E-05 48.0 3.3 30 158-187 3-33 (404)
458 1i36_A Conserved hypothetical 81.0 1.2 4.2E-05 43.4 4.4 30 159-188 2-31 (264)
459 3h2s_A Putative NADH-flavin re 80.9 1.6 5.5E-05 41.1 5.1 32 159-190 2-34 (224)
460 2ahr_A Putative pyrroline carb 80.9 1.2 4E-05 43.5 4.2 33 158-190 4-36 (259)
461 3h8v_A Ubiquitin-like modifier 80.8 1.2 4.3E-05 44.3 4.3 34 157-190 36-70 (292)
462 3d1l_A Putative NADP oxidoredu 80.8 1.2 4.2E-05 43.6 4.3 33 158-190 11-44 (266)
463 3nep_X Malate dehydrogenase; h 80.8 1.4 4.8E-05 44.5 4.8 32 159-190 2-35 (314)
464 1nvt_A Shikimate 5'-dehydrogen 80.7 1.2 3.9E-05 44.5 4.1 33 157-190 128-160 (287)
465 1yb4_A Tartronic semialdehyde 80.6 1.1 3.9E-05 44.5 4.0 32 158-190 4-35 (295)
466 1hdo_A Biliverdin IX beta redu 80.3 2 6.9E-05 39.6 5.5 33 158-190 4-37 (206)
467 2iz1_A 6-phosphogluconate dehy 80.3 1.5 5.3E-05 47.0 5.2 33 158-190 6-38 (474)
468 2d5c_A AROE, shikimate 5-dehyd 80.2 1.6 5.6E-05 42.7 5.0 32 159-190 118-149 (263)
469 1lu9_A Methylene tetrahydromet 80.1 1.8 6.1E-05 43.0 5.3 33 157-189 119-152 (287)
470 1np3_A Ketol-acid reductoisome 80.1 1.6 5.4E-05 44.6 5.0 33 158-190 17-49 (338)
471 2aef_A Calcium-gated potassium 80.0 0.69 2.3E-05 44.4 2.1 34 157-191 9-42 (234)
472 1npy_A Hypothetical shikimate 80.0 1.6 5.6E-05 43.0 4.9 33 157-189 119-152 (271)
473 4id9_A Short-chain dehydrogena 79.7 1.6 5.5E-05 44.3 5.0 38 154-191 16-54 (347)
474 3d0o_A L-LDH 1, L-lactate dehy 79.7 1.7 5.9E-05 43.9 5.0 33 157-189 6-40 (317)
475 1leh_A Leucine dehydrogenase; 79.5 1.8 6.2E-05 44.6 5.2 34 156-189 172-205 (364)
476 1gpj_A Glutamyl-tRNA reductase 79.3 1.7 5.8E-05 45.7 5.0 35 156-190 166-201 (404)
477 3gvp_A Adenosylhomocysteinase 78.5 1.8 6.2E-05 45.4 4.8 35 156-190 219-253 (435)
478 4fk1_A Putative thioredoxin re 78.5 1.6 5.5E-05 43.5 4.4 51 389-440 183-233 (304)
479 4hv4_A UDP-N-acetylmuramate--L 78.4 1.5 5.3E-05 47.3 4.5 34 157-190 22-56 (494)
480 4b4o_A Epimerase family protei 78.4 2.3 8E-05 42.1 5.6 33 159-191 2-35 (298)
481 2pzm_A Putative nucleotide sug 78.3 2.2 7.7E-05 43.0 5.5 35 156-190 19-54 (330)
482 3h5n_A MCCB protein; ubiquitin 78.2 1.8 6.1E-05 44.6 4.7 34 157-190 118-152 (353)
483 3ce6_A Adenosylhomocysteinase; 78.1 2 6.9E-05 46.2 5.2 35 156-190 273-307 (494)
484 2dbq_A Glyoxylate reductase; D 78.1 2.3 7.8E-05 43.4 5.4 35 156-190 149-183 (334)
485 3dhn_A NAD-dependent epimerase 78.0 1.7 5.8E-05 41.1 4.2 33 158-190 5-38 (227)
486 1cjc_A Protein (adrenodoxin re 77.1 2.7 9.4E-05 44.9 5.9 45 399-443 270-333 (460)
487 4a26_A Putative C-1-tetrahydro 76.7 2.8 9.6E-05 41.7 5.3 34 156-189 164-198 (300)
488 3vps_A TUNA, NAD-dependent epi 76.7 2.4 8.2E-05 42.3 5.1 35 157-191 7-42 (321)
489 3fi9_A Malate dehydrogenase; s 76.5 2.5 8.4E-05 43.3 5.1 34 157-190 8-44 (343)
490 3b1f_A Putative prephenate deh 76.4 2.4 8.1E-05 42.1 4.9 33 158-190 7-41 (290)
491 1a4i_A Methylenetetrahydrofola 76.1 2.8 9.4E-05 41.7 5.1 34 156-189 164-198 (301)
492 4g6h_A Rotenone-insensitive NA 76.1 1.8 6.3E-05 46.8 4.3 58 158-236 218-289 (502)
493 3r6d_A NAD-dependent epimerase 76.0 3.5 0.00012 38.7 5.8 33 158-190 6-40 (221)
494 3ngx_A Bifunctional protein fo 75.8 2.9 0.0001 41.0 5.2 34 156-189 149-183 (276)
495 2yjz_A Metalloreductase steap4 77.6 0.56 1.9E-05 44.1 0.0 34 157-190 19-52 (201)
496 4gsl_A Ubiquitin-like modifier 75.7 2.5 8.4E-05 46.4 5.0 35 157-191 326-361 (615)
497 1ez4_A Lactate dehydrogenase; 75.5 2.7 9.1E-05 42.5 5.0 33 157-189 5-39 (318)
498 3vh1_A Ubiquitin-like modifier 75.5 2.3 7.8E-05 46.6 4.7 34 157-190 327-361 (598)
499 2gcg_A Glyoxylate reductase/hy 75.3 2.5 8.4E-05 43.0 4.7 35 156-190 154-188 (330)
500 1ps9_A 2,4-dienoyl-COA reducta 75.1 4.4 0.00015 45.6 7.2 50 389-442 576-627 (671)
No 1
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=4e-57 Score=503.30 Aligned_cols=476 Identities=25% Similarity=0.349 Sum_probs=317.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCcceeeEeeCCeEEccccccccCCcCCCchHHHHHHHHhcCCce
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEM 236 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~d~G~~~~~g~~~~~~~~~~~~ll~~lG~~~ 236 (658)
+++|||||||++||+||++|+++|++|+|+|+++++||+++|++.+||.||.|+|++. .+..+.++++.+|..+
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~G~~~D~G~~~~~------~~~~~~~l~~~~g~~~ 74 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQGFTFDAGPTVIT------DPSAIEELFALAGKQL 74 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEETTEEEECSCCCBS------CTHHHHHHHHTTTCCG
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeCCEEEecCceeec------CchhHHHHHHHhcchh
Confidence 3689999999999999999999999999999999999999999999999999999986 3456778888887543
Q ss_pred ----eEeeCCCeEEEEcCCCcEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhh-hhhhccchhhHhhhhh
Q 006176 237 ----EVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNS-LELKSLEEPIYLFGQF 311 (658)
Q Consensus 237 ----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 311 (658)
+..+....+.+.+++|..+.++.+...+.+.+.+.+|.+.+.+.+|++.....+..... +...+... +..+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 150 (501)
T 4dgk_A 75 KEYVELLPVTPFYRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVEGYRQFLDYSRAVFKEGYLKLGTVPFLS----FRDM 150 (501)
T ss_dssp GGTCCEEEESSSEEEEETTSCEEEECSCHHHHHHHHHHHCTHHHHHHHHHHHHHHHHTSSSCC--CCCCCCC----HHHH
T ss_pred hhceeeEecCcceEEEcCCCCEEEeeccHHHHHHHHhhcCccccchhhhHHHHHHHhhhhhhhhccccccch----hhhh
Confidence 34555555667788999999999999999999999999989998888766554321110 00000100 0111
Q ss_pred hcChhhhhhHhhcccccHHHHHHHhcCCHHHHHHHhhhhhhhccCCCCCchHHHHHHHHhHhhcCCccccCCChHHHHHH
Q 006176 312 FKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKS 391 (658)
Q Consensus 312 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~p~gG~~~l~~~ 391 (658)
.........+ ...+++.+.+++++.++.++.++...+.+.+ ..+...++.+..+.. .....|.++|+||++.|+++
T Consensus 151 ~~~~~~~~~l--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g-~~p~~~~~~~~~~~~-~~~~~G~~~p~GG~~~l~~a 226 (501)
T 4dgk_A 151 LRAAPQLAKL--QAWRSVYSKVASYIEDEHLRQAFSFHSLLVG-GNPFATSSIYTLIHA-LEREWGVWFPRGGTGALVQG 226 (501)
T ss_dssp HHSGGGTTTS--HHHHHHHHHHHTTCCCHHHHHHHHHHHHHHH-SCC--CCCTHHHHHH-HHSCCCEEEETTHHHHHHHH
T ss_pred hhhhhhhhhh--hhcccHHHHHHHHhccHHHHhhhhhhhcccC-CCcchhhhhhhhhhh-hhccCCeEEeCCCCcchHHH
Confidence 1110000000 0113567888999999999999887766654 445555544433322 23456788999999999999
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHHHhhccCCCCCChHHHHHHHhhccCCce
Q 006176 392 LAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSF 471 (658)
Q Consensus 392 L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~~Ll~~~~lp~~~~~~~~~~~~~~s~ 471 (658)
|++.++++|++|++|++|++|..+++++++|++.||+++.||.||+|++++.++..|++....+....+.....+.+++.
T Consensus 227 L~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~s~ 306 (501)
T 4dgk_A 227 MIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAAVKQSNKLQTKRMSNSL 306 (501)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC---------------------------CCEE
T ss_pred HHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccchhhhhhhhccccCCce
Confidence 99999999999999999999999999999999999999999999999999999888888766776665566677778899
Q ss_pred EEEEEeeecCcCCCCCCcceeeecchhhhh-cc--------CCCceEEeccCCCCCCCCCCCceEEEEEeccccchhccc
Q 006176 472 LSIHMGVKAEVLPPDTDCHHFVLEDDWNRL-EE--------PYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGL 542 (658)
Q Consensus 472 ~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~s~~d~~~ap~G~~~l~~~~~~~~~~w~~l 542 (658)
++++++++.+. +....|++++.+++... +. ....+++++++..||+++|+|+++++++++.+...|.
T Consensus 307 ~~~~~~l~~~~--~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~~~~~-- 382 (501)
T 4dgk_A 307 FVLYFGLNHHH--DQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPHLGTA-- 382 (501)
T ss_dssp EEEEEEESSCC--TTSCSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEECCTTTS--
T ss_pred eEEEecccCCc--cccccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceEEEEEecCccccc--
Confidence 99999998775 34445666666554321 10 1125889999999999999999999998877654443
Q ss_pred ChhhhHHHHHHHHHHHHHHHHHhhCCCCcCcEEEEEecChhHHHHHhcCCCCc-ccCCCCCCCCCCCCCCCC-CCCCCcE
Q 006176 543 AQKDYDAKKELVADEIINRLENKLFPGLKQSIAFREIGSPKTHRRYLARDQGT-YGPMPRGTPKGLLGMPFN-TTGINGL 620 (658)
Q Consensus 543 ~~~~~~~~ke~~~~~il~~L~~~~~P~l~~~i~~~~~~tP~~~~~~~~~~~G~-yg~~p~~~~~~~~~~p~~-~t~i~gL 620 (658)
..+|++.++++.+++++.|+++++|+++++|+..++.||.||+++++.++|+ ||..+...+.. ..||.. .|+++||
T Consensus 383 -~~~~~~~~~~~~~~vl~~l~~~~~P~~~~~i~~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~-~~RP~~~~t~i~gL 460 (501)
T 4dgk_A 383 -NLDWTVEGPKLRDRIFAYLEQHYMPGLRSQLVTHRMFTPFDFRDQLNAYHGSAFSVEPVLTQSA-WFRPHNRDKTITNL 460 (501)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHTCTTHHHHEEEEEEECTTTTC-------------------------------CCTTE
T ss_pred -cccHHHHHHHHHHHHHHHHHHhhCCChHHceEEEEECCHHHHHHHcCCCCccccChhcchhhcc-ccCCCCCCCCCCCE
Confidence 4468889999999999999955789999999999999999999998888886 66555433322 335654 5899999
Q ss_pred EEeCCCccCCCChhHHhhhHHHHHHHHHHHhc
Q 006176 621 YCVGDSCFPGQGVIAVAFSGVMCAHRVAADIG 652 (658)
Q Consensus 621 ylaG~~~~pG~Gv~ga~~sG~~aA~~Il~~lg 652 (658)
|+||++||||+||+||+.||++||++|++||.
T Consensus 461 yl~G~~t~pG~Gv~ga~~SG~~aA~~il~dL~ 492 (501)
T 4dgk_A 461 YLVGAGTHPGAGIPGVIGSAKATAGLMLEDLI 492 (501)
T ss_dssp EECCCH------HHHHHHHHHHHHHHHHHHHC
T ss_pred EEECCCCCCcccHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999984
No 2
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=2.2e-36 Score=328.78 Aligned_cols=409 Identities=22% Similarity=0.280 Sum_probs=277.4
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCcceeeEeeCCeEEccccccccCCcCCCchHHHHHHHHhcCCcee
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEME 237 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~d~G~~~~~g~~~~~~~~~~~~ll~~lG~~~~ 237 (658)
+||+|||||++||+||++|+++|++|+|+|+++.+||++.++..+|+.+|.|++.+.... ....+.++++++|+..+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~G~~~d~G~~~~~~~~---~~~~~~~l~~~lg~~~~ 77 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYKGFQLSSGAFHMLPNG---PGGPLACFLKEVEASVN 77 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEETTEEEESSSCSCBTTG---GGSHHHHHHHHTTCCCC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccCCcEEcCCCceEecCC---CccHHHHHHHHhCCCce
Confidence 589999999999999999999999999999999999999999999999999987664322 23467888999998766
Q ss_pred EeeCC-CeEEEEcCC--------CcEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHhh
Q 006176 238 VIPDP-TTVHFHLPN--------DLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLF 308 (658)
Q Consensus 238 ~~~~~-~~~~~~~~~--------g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (658)
..+.. ....+.+.+ +..+.+.. . ...+. ......+. ..+.. .+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~--~~~~~~~~-------~~~~~--~~--------- 129 (425)
T 3ka7_A 78 IVRSEMTTVRVPLKKGNPDYVKGFKDISFND-F-------PSLLS--YKDRMKIA-------LLIVS--TR--------- 129 (425)
T ss_dssp EEECCCCEEEEESSTTCCSSTTCEEEEEGGG-G-------GGGSC--HHHHHHHH-------HHHHH--TT---------
T ss_pred EEecCCceEEeecCCCcccccccccceehhh-h-------hhhCC--HHHHHHHH-------HHHHh--hh---------
Confidence 55433 222222222 22221111 0 00010 00000000 00000 00
Q ss_pred hhhhcChhhhhhHhhcccccHHHHHHHhcCCHHHHHHHhhhhhhhccCCCCCchHHHHHHHHh-HhhcCCccccCCChHH
Q 006176 309 GQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLC-DRHFGGINYPVGGVGG 387 (658)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~g~~~p~gG~~~ 387 (658)
. ......++.+++++++.++.++.++...+....+..+...++......+. ....++.+++.||++.
T Consensus 130 -----~-------~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~gG~~~ 197 (425)
T 3ka7_A 130 -----K-------NRPSGSSLQAWIKSQVSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYRFGGTGIPEGGCKG 197 (425)
T ss_dssp -----T-------SCCCSSBHHHHHHHHCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHHCSCEEETTSHHH
T ss_pred -----h-------cCCCCCCHHHHHHHhcCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHhcCCccccCCCHHH
Confidence 0 01124678899999999888888877665544456666666643222111 1234678899999999
Q ss_pred HHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHHHhhccCC-CCC--ChHHHHHHHh
Q 006176 388 IAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKG-EQL--PKEEENFQKL 464 (658)
Q Consensus 388 l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~~Ll~~-~~l--p~~~~~~~~~ 464 (658)
++++|.+.++++|++|+++++|++|..+++++++|++. |+++.||.||+|++++.+. +|++. ..+ |....+.+..
T Consensus 198 l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~-~ll~~~~~~~~~~~~~~~~~~ 275 (425)
T 3ka7_A 198 IIDALETVISANGGKIHTGQEVSKILIENGKAAGIIAD-DRIHDADLVISNLGHAATA-VLCSEALSKEADAAYFKMVGT 275 (425)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET-TEEEECSEEEECSCHHHHH-HHTTTTCCTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEEC-CEEEECCEEEECCCHHHHH-HhcCCcccccCCHHHHHHhhC
Confidence 99999999999999999999999999999999889875 7789999999999999875 57753 233 6655555566
Q ss_pred hccCCceEEEEEeeecCcCCCCCCcceeeecchhhhhccCCCceEEeccCCCCCCCCCCCceEEEEEeccccchhcccCh
Q 006176 465 YVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQ 544 (658)
Q Consensus 465 ~~~~~s~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G~~~l~~~~~~~~~~w~~l~~ 544 (658)
+.++ +.++++++++++.+ ..+++++..++. + ...+.++|..||+++|+|+++++++... .|.+.
T Consensus 276 ~~~~-~~~~v~l~~~~~~~----~~~~~~~~~~~~----~--~~~~~~~s~~~p~~ap~G~~~l~~~~~~---~~~~~-- 339 (425)
T 3ka7_A 276 LQPS-AGIKICLAADEPLV----GHTGVLLTPYTR----R--INGVNEVTQADPELAPPGKHLTMCHQYV---APENV-- 339 (425)
T ss_dssp CCCB-EEEEEEEEESSCSS----CSSSEEECCSSS----S--EEEEECGGGTCGGGSCTTCEEEEEEEEE---CGGGG--
T ss_pred cCCC-ceEEEEeecCCCcc----CcCEEEECCChh----h--cceEEeccCCCCCcCCCCCeEEEEEecc---ccccc--
Confidence 6655 45789999988753 235566655432 1 1346788999999999999998776543 23221
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhCCCCcCcEEEEEecChhHHHHHhcCCCCcccCCCCCCCCCCCCCCCCCCCCCcEEEeC
Q 006176 545 KDYDAKKELVADEIINRLENKLFPGLKQSIAFREIGSPKTHRRYLARDQGTYGPMPRGTPKGLLGMPFNTTGINGLYCVG 624 (658)
Q Consensus 545 ~~~~~~ke~~~~~il~~L~~~~~P~l~~~i~~~~~~tP~~~~~~~~~~~G~yg~~p~~~~~~~~~~p~~~t~i~gLylaG 624 (658)
+.. ++.++.++++|+ +++|+.+..++ .+. . +.++. |...+ +...+|..++|++|||+||
T Consensus 340 ---~~~-~~~~~~~~~~l~-~~~p~~~~~~~--~v~---------~-~~~~~---P~~~~-~~~~~~~~~~p~~gL~laG 398 (425)
T 3ka7_A 340 ---KNL-ESEIEMGLEDLK-EIFPGKRYEVL--LIQ---------S-YHDEW---PVNRA-ASGTDPGNETPFSGLYVVG 398 (425)
T ss_dssp ---GGH-HHHHHHHHHHHH-HHSTTCCEEEE--EEE---------E-EBTTB---CSBSS-CTTCCCCSBCSSBTEEECS
T ss_pred ---cch-HHHHHHHHHHHH-HhCCCCceEEE--EEE---------E-ECCCc---ccccc-ccCCCCCCCCCcCCeEEeC
Confidence 112 344689999999 99998543332 221 1 11111 11111 1123567789999999999
Q ss_pred CCccC--CCChhHHhhhHHHHHHHHH
Q 006176 625 DSCFP--GQGVIAVAFSGVMCAHRVA 648 (658)
Q Consensus 625 ~~~~p--G~Gv~ga~~sG~~aA~~Il 648 (658)
||+++ |.||++|+.||++||++|+
T Consensus 399 ~~~~~~gg~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 399 DGAKGKGGIEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp TTSCCTTCCHHHHHHHHHHHHHHC--
T ss_pred CccCCCCCCccHHHHHHHHHHHHHhh
Confidence 99998 7899999999999999986
No 3
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=100.00 E-value=4e-34 Score=310.80 Aligned_cols=407 Identities=18% Similarity=0.240 Sum_probs=274.1
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCcceeeEeeCCeEEccccccccCCcCCCchHHHHHHHHhcCCcee
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEME 237 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~d~G~~~~~g~~~~~~~~~~~~ll~~lG~~~~ 237 (658)
+||+|||||++||+||++|+++|++|+|+|+++.+||++.++..+|+.+|.|++.+.... ....+.++++++|+..+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~g~~~d~G~~~~~~~~---~~~~~~~l~~~lg~~~~ 77 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKGFQLSTGALHMIPHG---EDGPLAHLLRILGAKVE 77 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEETTEEEESSSCSEETTT---TSSHHHHHHHHHTCCCC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccCCEEEecCCeEEEccC---CChHHHHHHHHhCCcce
Confidence 489999999999999999999999999999999999999999999999999987765432 12357788889998766
Q ss_pred EeeCCCeEEEEcCCCcEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHhhhhhhcChhh
Q 006176 238 VIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPLE 317 (658)
Q Consensus 238 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (658)
..+......+.+ ++..+.+..... ...+.+...+..+.... . ..
T Consensus 78 ~~~~~~~~~~~~-~g~~~~~~~~~~-------~l~~~~~~~~~~~~~~~-------~------------------~~--- 121 (421)
T 3nrn_A 78 IVNSNPKGKILW-EGKIFHYRESWK-------FLSVKEKAKALKLLAEI-------R------------------MN--- 121 (421)
T ss_dssp EEECSSSCEEEE-TTEEEEGGGGGG-------GCC--------CCHHHH-------H------------------TT---
T ss_pred EEECCCCeEEEE-CCEEEEcCCchh-------hCCHhHHHHHHHHHHHH-------H------------------hc---
Confidence 555433333333 455444332111 00111111111110000 0 00
Q ss_pred hhhHhhcccccHHHHHHHh-cCCHHHHHHHhhhhhhhccCCCCCchHHHHHHHHh-HhhcCCccccCCChHHHHHHHHHH
Q 006176 318 CLTLAYYLPQNAGNIARKY-IKDPQLLSFIDAECFIVSTINALQTPMINASMVLC-DRHFGGINYPVGGVGGIAKSLAKG 395 (658)
Q Consensus 318 ~~~~~~~~~~s~~~~~~~~-~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~g~~~p~gG~~~l~~~L~~~ 395 (658)
.......++.+++.++ +.++.++.++........+..+...++......+. ....++.++|.||++.++++|++.
T Consensus 122 ---~~~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~gG~~~l~~~l~~~ 198 (421)
T 3nrn_A 122 ---KLPKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALRWGGPGLIRGGCKAVIDELERI 198 (421)
T ss_dssp ---CCCCCCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHHCSCEEETTCHHHHHHHHHHH
T ss_pred ---cCCCCCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhhcCCcceecCCHHHHHHHHHHH
Confidence 0001125678888888 88888887776665554556666666633222111 123467889999999999999999
Q ss_pred HHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHHHhhccCCCCCChHHHHHHHhhccCCceEEEE
Q 006176 396 LADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIH 475 (658)
Q Consensus 396 l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~~Ll~~~~lp~~~~~~~~~~~~~~s~~~v~ 475 (658)
++++|++|+++++|++|..+++++ | +.+|+++.||.||+|++++.+. +|++.+.+|....+....+.++ +.++++
T Consensus 199 ~~~~G~~i~~~~~V~~i~~~~~~v--V-~~~g~~~~ad~Vv~a~~~~~~~-~ll~~~~~~~~~~~~~~~~~~~-~~~~v~ 273 (421)
T 3nrn_A 199 IMENKGKILTRKEVVEINIEEKKV--Y-TRDNEEYSFDVAISNVGVRETV-KLIGRDYFDRDYLKQVDSIEPS-EGIKFN 273 (421)
T ss_dssp HHTTTCEEESSCCEEEEETTTTEE--E-ETTCCEEECSEEEECSCHHHHH-HHHCGGGSCHHHHHHHHTCCCC-CEEEEE
T ss_pred HHHCCCEEEcCCeEEEEEEECCEE--E-EeCCcEEEeCEEEECCCHHHHH-HhcCcccCCHHHHHHHhCCCCC-ceEEEE
Confidence 999999999999999999888886 5 5678889999999999998875 6777445776665566667666 678999
Q ss_pred EeeecCcCCCCCCcceeeecchhhhhccCCCceEEeccCCCCCCCCCCCceEEEEEeccccchhcccChhhhHHHHHHHH
Q 006176 476 MGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVA 555 (658)
Q Consensus 476 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G~~~l~~~~~~~~~~w~~l~~~~~~~~ke~~~ 555 (658)
++++++.+ ..+++++..++. + -.+++++..||+++|+|++++++....+..+ .++..
T Consensus 274 l~~~~~~~----~~~~~~~~~~~~-----~--~~i~~~s~~~p~~ap~G~~~~~~~~~~~~~~------------~~~~~ 330 (421)
T 3nrn_A 274 LAVPGEPR----IGNTIVFTPGLM-----I--NGFNEPSALDKSLAREGYTLIMAHMALKNGN------------VKKAI 330 (421)
T ss_dssp EEEESSCS----SCSSEEECTTSS-----S--CEEECGGGTCGGGSCTTEEEEEEEEECTTCC------------HHHHH
T ss_pred EEEcCCcc----cCCeEEEcCCcc-----e--eeEeccCCCCCCcCCCCceEEEEEEeecccc------------HHHHH
Confidence 99998742 235566665432 2 2357788999999999999888766543110 12347
Q ss_pred HHHHHHHHHhhCCCCcCcEEEEEecChhHHHHHhcCCCCcccCCCCCCCCCCCCCCCCCCCCCcEEEeCCCccCCCCh--
Q 006176 556 DEIINRLENKLFPGLKQSIAFREIGSPKTHRRYLARDQGTYGPMPRGTPKGLLGMPFNTTGINGLYCVGDSCFPGQGV-- 633 (658)
Q Consensus 556 ~~il~~L~~~~~P~l~~~i~~~~~~tP~~~~~~~~~~~G~yg~~p~~~~~~~~~~p~~~t~i~gLylaG~~~~pG~Gv-- 633 (658)
+.++++|+ +++| ...+...... +..+. .|...+. ...+ .++ +|||+|||++.+++|+
T Consensus 331 ~~~~~~L~-~~~p--~~~~~~~~~~-~~~~p--------~~~~~~~------~~~~--~~~-~gl~laGd~~~~~~g~~~ 389 (421)
T 3nrn_A 331 EKGWEELL-EIFP--EGEPLLAQVY-RDGNP--------VNRTRAG------LHIE--WPL-NEVLVVGDGYRPPGGIEV 389 (421)
T ss_dssp HHHHHHHH-HHCT--TCEEEEEEEC----------------------------CCC--CCC-SSEEECSTTCCCTTCCHH
T ss_pred HHHHHHHH-HHcC--CCeEEEeeec-cCCCC--------cccccCC------CCCC--CCC-CcEEEECCcccCCCceee
Confidence 89999999 9999 3222222111 00000 0111111 1123 577 9999999999877666
Q ss_pred hHHhhhHHHHHHHHHHHhcccCCC
Q 006176 634 IAVAFSGVMCAHRVAADIGNRIGW 657 (658)
Q Consensus 634 ~ga~~sG~~aA~~Il~~lg~~~~~ 657 (658)
+||+.||++||+.| .+|.-..|
T Consensus 390 ~ga~~sg~~aA~~l--~~~~~~~~ 411 (421)
T 3nrn_A 390 DGIALGVMKALEKL--NLGSFSEW 411 (421)
T ss_dssp HHHHHHHHHHHHHT--TSCCCCTT
T ss_pred ehHHHHHHHHHHHh--CcCchhhh
Confidence 99999999999999 55554455
No 4
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=3.6e-32 Score=303.57 Aligned_cols=432 Identities=16% Similarity=0.167 Sum_probs=272.8
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCcceeeEeeC-CeEEccccccccCCcCCCchHHHHHHHHhcCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERD-GYTFDVGSSVMFGFSDKGNLNLITQALAAVGC 234 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~-g~~~d~G~~~~~g~~~~~~~~~~~~ll~~lG~ 234 (658)
..+||+|||||++||+||++|+++|++|+|+|+++++||++.|++.. |+.+|.|++++.+. ...+.++++++|+
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~-----~~~~~~l~~~lgl 77 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPT-----QNRILRLAKELGL 77 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTT-----CHHHHHHHHHTTC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCC-----cHHHHHHHHHcCC
Confidence 35799999999999999999999999999999999999999999985 99999999998752 3467788999998
Q ss_pred ceeEeeCCCeEEEEcCCCcEEEEcCCHHHHHHHHHHhCCC--c---HHHHHHHHHHHHHHHHHhhhhhhhccchhhHhhh
Q 006176 235 EMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPH--E---KEGVLAFYGECWKIFNALNSLELKSLEEPIYLFG 309 (658)
Q Consensus 235 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (658)
+.......... +...++........ +|. . ...+..++....+.... +..
T Consensus 78 ~~~~~~~~~~~-~~~~~g~~~~~~~~-----------~p~~~~~~~~~~~~~~~~~~~~~~~~--------~~~------ 131 (520)
T 1s3e_A 78 ETYKVNEVERL-IHHVKGKSYPFRGP-----------FPPVWNPITYLDHNNFWRTMDDMGRE--------IPS------ 131 (520)
T ss_dssp CEEECCCSSEE-EEEETTEEEEECSS-----------SCCCCSHHHHHHHHHHHHHHHHHHTT--------SCT------
T ss_pred cceecccCCce-EEEECCEEEEecCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhh--------cCc------
Confidence 76543322222 22234544444321 111 1 11122222221111100 000
Q ss_pred hhhcChhhhhhHhhcccccHHHHHHHhcCCHHHHHHHhhhhhhhccCCCCCchHHHHHHHHhHh----------hcCCcc
Q 006176 310 QFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDR----------HFGGIN 379 (658)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~----------~~~g~~ 379 (658)
..+........+...++.+++++.+.++.++.++........+.++.+.++......+... .....+
T Consensus 132 ---~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~ 208 (520)
T 1s3e_A 132 ---DAPWKAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQER 208 (520)
T ss_dssp ---TCGGGSTTHHHHHTSBHHHHHHHHCSSHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSE
T ss_pred ---CCCccccchhhhhccCHHHHHHhhCCCHHHHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceE
Confidence 0000001112245678899999999999888888766544445566776665433221110 112346
Q ss_pred ccCCChHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHHHhhccCCCCCChHHH
Q 006176 380 YPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEE 459 (658)
Q Consensus 380 ~p~gG~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~~Ll~~~~lp~~~~ 459 (658)
++.||++.++++|++.+ |++|++|++|++|..++++++ |++.+|+++.||+||+|+++..+ .+++..+.+|....
T Consensus 209 ~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~v~-v~~~~g~~~~ad~VI~a~p~~~l-~~l~~~p~lp~~~~ 283 (520)
T 1s3e_A 209 KFVGGSGQVSERIMDLL---GDRVKLERPVIYIDQTRENVL-VETLNHEMYEAKYVISAIPPTLG-MKIHFNPPLPMMRN 283 (520)
T ss_dssp EETTCTHHHHHHHHHHH---GGGEESSCCEEEEECSSSSEE-EEETTSCEEEESEEEECSCGGGG-GGSEEESCCCHHHH
T ss_pred EEeCCHHHHHHHHHHHc---CCcEEcCCeeEEEEECCCeEE-EEECCCeEEEeCEEEECCCHHHH-cceeeCCCCCHHHH
Confidence 89999999999998877 789999999999998888776 88899989999999999998875 45654456888766
Q ss_pred HHHHhhccCCceEEEEEeeecCcCCCCCCcceeeecchhhhhccCCCceEEeccCCCCCCCCCCCceEEEEEecc-ccch
Q 006176 460 NFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTIC-SIED 538 (658)
Q Consensus 460 ~~~~~~~~~~s~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G~~~l~~~~~~-~~~~ 538 (658)
+.+..+.++ +..++++.+++++|+.......+++..+ ..+...+ + |++..+++..++..++.. ....
T Consensus 284 ~~i~~~~~~-~~~kv~l~~~~~~w~~~~~~g~~~~~~~----~~~~~~~---~----d~~~~~~~~~~l~~~~~~~~a~~ 351 (520)
T 1s3e_A 284 QMITRVPLG-SVIKCIVYYKEPFWRKKDYCGTMIIDGE----EAPVAYT---L----DDTKPEGNYAAIMGFILAHKARK 351 (520)
T ss_dssp HHTTSCCBC-CEEEEEEECSSCGGGGGTEEEEEEECST----TCSCSEE---E----ECCCTTSCSCEEEEEEETHHHHH
T ss_pred HHHHhCCCc-ceEEEEEEeCCCcccCCCCCceeeccCC----CCceEEE---e----eCCCCCCCCCEEEEEccchhhhh
Confidence 666655544 5779999999887653211111122111 1222111 1 222223334566666644 2345
Q ss_pred hcccChhhhHHHHHHHHHHHHHHHHHhhCCCCc-CcEEEEEecChhHHHHHhcCCCCcccC-CCCCCCCCCCCCCCCCCC
Q 006176 539 WEGLAQKDYDAKKELVADEIINRLENKLFPGLK-QSIAFREIGSPKTHRRYLARDQGTYGP-MPRGTPKGLLGMPFNTTG 616 (658)
Q Consensus 539 w~~l~~~~~~~~ke~~~~~il~~L~~~~~P~l~-~~i~~~~~~tP~~~~~~~~~~~G~yg~-~p~~~~~~~~~~p~~~t~ 616 (658)
|.+++ ++++.+.+++.|+ +++|.-. ..+..... ..|.+ .....|+|.+ .+.+.... + ++..++|
T Consensus 352 ~~~~~-------~~e~~~~vl~~L~-~~~~~~~~~~p~~~~~---~~W~~-~~~~~G~~~~~~~~g~~~~-~-~~~l~~p 417 (520)
T 1s3e_A 352 LARLT-------KEERLKKLCELYA-KVLGSLEALEPVHYEE---KNWCE-EQYSGGCYTTYFPPGILTQ-Y-GRVLRQP 417 (520)
T ss_dssp HTTSC-------HHHHHHHHHHHHH-HHHTCGGGGCCSEEEE---EEGGG-CTTTCSSSCBCCCTTHHHH-H-GGGTTCC
T ss_pred hhcCC-------HHHHHHHHHHHHH-HHhCccccCCccEEEE---EeeCC-CCCCCCCCccccCCCcccc-c-hHHHhCC
Confidence 55442 5778899999998 7777521 11111111 01211 1123466542 22111000 1 2345678
Q ss_pred CCcEEEeCCCc---cCCCChhHHhhhHHHHHHHHHHHhcc
Q 006176 617 INGLYCVGDSC---FPGQGVIAVAFSGVMCAHRVAADIGN 653 (658)
Q Consensus 617 i~gLylaG~~~---~pG~Gv~ga~~sG~~aA~~Il~~lg~ 653 (658)
++||||||+++ ++| +|+||+.||++||++|++.++.
T Consensus 418 ~~~L~fAG~~t~~~~~g-~v~GAi~SG~~aA~~i~~~l~~ 456 (520)
T 1s3e_A 418 VDRIYFAGTETATHWSG-YMEGAVEAGERAAREILHAMGK 456 (520)
T ss_dssp BTTEEECSGGGCSSSTT-SHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCCEEEeehhhcCcCcE-EhHHHHHHHHHHHHHHHHHHhc
Confidence 99999999987 444 8999999999999999999975
No 5
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=100.00 E-value=1.5e-31 Score=293.22 Aligned_cols=432 Identities=14% Similarity=0.081 Sum_probs=265.2
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCcceeeEeeCCeEEccccccccCCcCCCchHHHHHHHHhcCCc
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCE 235 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~d~G~~~~~g~~~~~~~~~~~~ll~~lG~~ 235 (658)
.++||+|||||++||+||++|+++|++|+|+|+++.+||++.+...+|+.+|.|++++.. ....+.++++++|++
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~-----~~~~~~~~~~~~g~~ 78 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSP-----DQTALISLLDELGLK 78 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCT-----TCHHHHHHHHHTTCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEecC-----ccHHHHHHHHHcCCc
Confidence 358999999999999999999999999999999999999999999999999999998864 234677889999987
Q ss_pred eeEeeCCCeEEEEcCCCcEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHhhhhhhcCh
Q 006176 236 MEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRP 315 (658)
Q Consensus 236 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (658)
...........+...++....+......+ .+.....+..++....+....+. ... +
T Consensus 79 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~------~~~-----------~ 134 (453)
T 2yg5_A 79 TFERYREGESVYISSAGERTRYTGDSFPT-------NETTKKEMDRLIDEMDDLAAQIG------AEE-----------P 134 (453)
T ss_dssp EEECCCCSEEEEECTTSCEEEECSSSCSC-------CHHHHHHHHHHHHHHHHHHHHHC------SSC-----------G
T ss_pred ccccccCCCEEEEeCCCceeeccCCCCCC-------ChhhHHHHHHHHHHHHHHHhhcC------CCC-----------C
Confidence 54433333333333334444432210000 00001111222221111111110 000 0
Q ss_pred hhhhhHhhcccccHHHHHHHhcCCHHHHHHHhhhhhhhccCCCC-CchHHHHHHHHhHh---------hcCCccccCCCh
Q 006176 316 LECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINAL-QTPMINASMVLCDR---------HFGGINYPVGGV 385 (658)
Q Consensus 316 ~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~p~~~~~~~~~~~---------~~~g~~~p~gG~ 385 (658)
........+...++.+++++++.++.++.++...+....+..+. +.++......+... .....+++.||+
T Consensus 135 ~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG~ 214 (453)
T 2yg5_A 135 WAHPLARDLDTVSFKQWLINQSDDAEARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGGM 214 (453)
T ss_dssp GGSTTHHHHHSSBHHHHHHHHCSCHHHHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTCT
T ss_pred CCCcchhhhhhccHHHHHHhhcCCHHHHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCCh
Confidence 00011123446788999999999998888877654333334555 66655433221110 011246899999
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCE-EEEEEECCCcEEEcCEEEECCChhHHHhhccCCCCCChHHHHHHHh
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGK-AVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKL 464 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~-v~gV~~~~G~~i~ad~VV~a~g~~~~~~~Ll~~~~lp~~~~~~~~~ 464 (658)
+.++++|++.+ |++|++|++|++|..++++ +. |++ +|+++.||+||+|+++..+ .+++..+.+|....+.+..
T Consensus 215 ~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~~v~-v~~-~~~~~~ad~VI~a~p~~~~-~~l~~~p~lp~~~~~~i~~ 288 (453)
T 2yg5_A 215 QQVSIRMAEAL---GDDVFLNAPVRTVKWNESGATV-LAD-GDIRVEASRVILAVPPNLY-SRISYDPPLPRRQHQMHQH 288 (453)
T ss_dssp HHHHHHHHHHH---GGGEECSCCEEEEEEETTEEEE-EET-TTEEEEEEEEEECSCGGGG-GGSEEESCCCHHHHHHGGG
T ss_pred HHHHHHHHHhc---CCcEEcCCceEEEEEeCCceEE-EEE-CCeEEEcCEEEEcCCHHHH-hcCEeCCCCCHHHHHHHhc
Confidence 99999998876 7899999999999998887 54 765 6778999999999998754 5665555788877666666
Q ss_pred hccCCceEEEEEeeecCcCCCCCCcceeeecchhhhhccCCCceEEeccCCCCCCCCCCC-ceEEEEEecc-ccchhccc
Q 006176 465 YVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEG-HHILHIFTIC-SIEDWEGL 542 (658)
Q Consensus 465 ~~~~~s~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G-~~~l~~~~~~-~~~~w~~l 542 (658)
+... +..++++.+++++|+... ....++.+ ..+...+ + |++ .|+| ..++..++.. ....|..+
T Consensus 289 ~~~~-~~~kv~l~~~~~~w~~~~-~~g~~~~~-----~~~~~~~---~----~~~-~~~~~~~~l~~~~~~~~~~~~~~~ 353 (453)
T 2yg5_A 289 QSLG-LVIKVHAVYETPFWREDG-LSGTGFGA-----SEVVQEV---Y----DNT-NHEDDRGTLVAFVSDEKADAMFEL 353 (453)
T ss_dssp EEEC-CEEEEEEEESSCGGGGGT-EEEEEECT-----TSSSCEE---E----ECC-CTTCSSEEEEEEEEHHHHHHHHHS
T ss_pred CCCc-ceEEEEEEECCCCCCCCC-CCceeecC-----CCCeEEE---E----eCC-CCCCCCCEEEEEeccHHHHHHhcC
Confidence 6554 577999999988765321 11122221 1232211 1 222 3444 4556665543 22334332
Q ss_pred ChhhhHHHHHHHHHHHHHHHHHhhCCCCcCcEEEEEecChhHHHHHhcCCCCcccC-CCCCCCCCCCCCCCCCCCCCcEE
Q 006176 543 AQKDYDAKKELVADEIINRLENKLFPGLKQSIAFREIGSPKTHRRYLARDQGTYGP-MPRGTPKGLLGMPFNTTGINGLY 621 (658)
Q Consensus 543 ~~~~~~~~ke~~~~~il~~L~~~~~P~l~~~i~~~~~~tP~~~~~~~~~~~G~yg~-~p~~~~~~~~~~p~~~t~i~gLy 621 (658)
.++++.+.+++.|+ +++|.-...++...+ .+|.+ .....|+|.+ .+.+.... . .+..++|++|||
T Consensus 354 -------~~~~~~~~~l~~L~-~~~~~~~~~p~~~~~---~~W~~-~~~~~G~~~~~~~~g~~~~-~-~~~~~~p~~~l~ 419 (453)
T 2yg5_A 354 -------SAEERKATILASLA-RYLGPKAEEPVVYYE---SDWGS-EEWTRGCYAASFDLGGLHR-Y-GADSRTPVGPIH 419 (453)
T ss_dssp -------CHHHHHHHHHHHHH-HHHCGGGGCCSEEEE---CCTTT-CTTTCSSSCEEECTTHHHH-H-GGGTTCCBTTEE
T ss_pred -------CHHHHHHHHHHHHH-HHhCccCCCccEEEE---eecCC-CCCCCCCCcCcCCCCcccc-c-hHHHhCCcCceE
Confidence 35778899999998 777641111111111 11211 0122455532 11111000 1 234568899999
Q ss_pred EeCCCcc---CCCChhHHhhhHHHHHHHHHHHhc
Q 006176 622 CVGDSCF---PGQGVIAVAFSGVMCAHRVAADIG 652 (658)
Q Consensus 622 laG~~~~---pG~Gv~ga~~sG~~aA~~Il~~lg 652 (658)
|||+++. +| +|+||+.||++||++|+++++
T Consensus 420 ~aG~~~~~~~~g-~v~gA~~SG~~aA~~i~~~l~ 452 (453)
T 2yg5_A 420 FSCSDIAAEGYQ-HVDGAVRMGQRTAADIIARSK 452 (453)
T ss_dssp ECCGGGCSTTTT-SHHHHHHHHHHHHHHHHHHC-
T ss_pred Eeeccccccccc-chHHHHHHHHHHHHHHHHHhc
Confidence 9999973 44 799999999999999999875
No 6
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=100.00 E-value=1.6e-32 Score=303.16 Aligned_cols=427 Identities=16% Similarity=0.164 Sum_probs=264.7
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCcceeeEeeCCeEEccccccccCCcCCCchHHHHHHHHhcCC
Q 006176 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGC 234 (658)
Q Consensus 155 ~~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~d~G~~~~~g~~~~~~~~~~~~ll~~lG~ 234 (658)
...+||+|||||++||+||+.|+++|++|+|+|+.+.+||++.|+...|+.+|.|++++.+ ....+.++++++|+
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~-----~~~~~~~~~~~~gl 88 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLD-----REPATRALAAALNL 88 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEET-----TCHHHHHHHHHTTC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhh-----hhHHHHHHHHHcCC
Confidence 4568999999999999999999999999999999999999999999999999999999975 23567899999998
Q ss_pred ceeEeeCC--CeEEEEcCCCcEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHhhhhhh
Q 006176 235 EMEVIPDP--TTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFF 312 (658)
Q Consensus 235 ~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (658)
..+..... ....+.+.+|..+.++.+...+... ..- . +...+ ..+. ..+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~---~~~-~---~~~~~-------~~~~---------------~~~ 139 (478)
T 2ivd_A 89 EGRIRAADPAAKRRYVYTRGRLRSVPASPPAFLAS---DIL-P---LGARL-------RVAG---------------ELF 139 (478)
T ss_dssp GGGEECSCSSCCCEEEEETTEEEECCCSHHHHHTC---SSS-C---HHHHH-------HHHG---------------GGG
T ss_pred cceeeecCccccceEEEECCEEEECCCCHHHhccC---CCC-C---HHHHH-------HHhh---------------hhh
Confidence 65443221 2223334456655555544332210 000 0 00000 0000 000
Q ss_pred cChhhhhhHhhcccccHHHHHHHhcCCHHHHHHHhhhhhhhccCCCCCchHHHHHHHH--------------h-------
Q 006176 313 KRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVL--------------C------- 371 (658)
Q Consensus 313 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~--------------~------- 371 (658)
.... ......++.+++++.+.++.++.++........+.++.+.++......+ .
T Consensus 140 ~~~~-----~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (478)
T 2ivd_A 140 SRRA-----PEGVDESLAAFGRRHLGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQR 214 (478)
T ss_dssp CCCC-----CTTCCCBHHHHHHHHTCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHT
T ss_pred cCCC-----CCCCCCCHHHHHHHhhCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccc
Confidence 0000 0123567888888887777776666655444444555565543211000 0
Q ss_pred -----Hhhc----CCccccCCChHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEE---CCCcEEEcCEEEECC
Q 006176 372 -----DRHF----GGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRL---SDGREFYAKTIISNA 439 (658)
Q Consensus 372 -----~~~~----~g~~~p~gG~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~---~~G~~i~ad~VV~a~ 439 (658)
.... .+.++++||++.++++|++.+ |++|+++++|++|..+++++ .|++ .+|+++.||+||+|+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~~-~v~~~~~~~g~~~~ad~vV~a~ 290 (478)
T 2ivd_A 215 QAALPAGTAPKLSGALSTFDGGLQVLIDALAASL---GDAAHVGARVEGLAREDGGW-RLIIEEHGRRAELSVAQVVLAA 290 (478)
T ss_dssp CC----CCSCCCCCCEEEETTCTHHHHHHHHHHH---GGGEESSEEEEEEECC--CC-EEEEEETTEEEEEECSEEEECS
T ss_pred cccCcccccccccccEEEECCCHHHHHHHHHHHh---hhhEEcCCEEEEEEecCCeE-EEEEeecCCCceEEcCEEEECC
Confidence 0001 567899999999999999888 67999999999999877764 5777 678889999999999
Q ss_pred ChhHHHhhccCCCCCChHHHHHHHhhccCCceEEEEEeeecCcCCCCCCcceeeecchhhhhccCCCceEEeccCCCCCC
Q 006176 440 TRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSS 519 (658)
Q Consensus 440 g~~~~~~~Ll~~~~lp~~~~~~~~~~~~~~s~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~ 519 (658)
+++.+ .++++ .+|....+.+..+.+. +..++++.++++.|+.. ....++++.. . ..+. ..+.+++..++.
T Consensus 291 ~~~~~-~~ll~--~l~~~~~~~l~~~~~~-~~~~v~l~~~~~~~~~~-~~~~~~~~~~-~--~~~~--~~~~~~s~~~~~ 360 (478)
T 2ivd_A 291 PAHAT-AKLLR--PLDDALAALVAGIAYA-PIAVVHLGFDAGTLPAP-DGFGFLVPAE-E--QRRM--LGAIHASTTFPF 360 (478)
T ss_dssp CHHHH-HHHHT--TTCHHHHHHHHTCCBC-CEEEEEEEECTTSSCCC-CSSEEECCGG-G--CCSC--CEEEEHHHHCGG
T ss_pred CHHHH-HHHhh--ccCHHHHHHHhcCCCC-cEEEEEEEEccccCCCC-CceEEEecCC-C--CCce--EEEEEEcccCCC
Confidence 98875 46675 4777766666666655 57899999998876542 1122233211 0 0111 223344444566
Q ss_pred CCCCCceEEEEEecccc-chhcccChhhhHHHHHHHHHHHHHHHHHhhCCCCcCcEEEEEecChhHHHHHhcCCCCccc-
Q 006176 520 LAPEGHHILHIFTICSI-EDWEGLAQKDYDAKKELVADEIINRLENKLFPGLKQSIAFREIGSPKTHRRYLARDQGTYG- 597 (658)
Q Consensus 520 ~ap~G~~~l~~~~~~~~-~~w~~l~~~~~~~~ke~~~~~il~~L~~~~~P~l~~~i~~~~~~tP~~~~~~~~~~~G~yg- 597 (658)
++|+|..++.+++.... ..|.+ ..++++.+.+++.|+ +++|... .+....+ ..+ .+++.
T Consensus 361 ~~p~g~~~l~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~-~~~~~~~-~p~~~~~---------~~w-~~~~p~ 421 (478)
T 2ivd_A 361 RAEGGRVLYSCMVGGARQPGLVE-------QDEDALAALAREELK-ALAGVTA-RPSFTRV---------FRW-PLGIPQ 421 (478)
T ss_dssp GBSTTCEEEEEEEECTTCGGGGG-------SCHHHHHHHHHHHHH-HHHCCCS-CCSEEEE---------EEE-SSCCBC
T ss_pred cCCCCCEEEEEEeCCcCCccccC-------CCHHHHHHHHHHHHH-HHhCCCC-CCcEEEE---------EEC-CCcccC
Confidence 67888888777765432 22322 236788999999999 8888653 2222111 111 12221
Q ss_pred CCCCCCCC-CCCCCCCCCCCCCcEEEeCCCccCCCChhHHhhhHHHHHHHHHHHhcccCC
Q 006176 598 PMPRGTPK-GLLGMPFNTTGINGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGNRIG 656 (658)
Q Consensus 598 ~~p~~~~~-~~~~~p~~~t~i~gLylaG~~~~pG~Gv~ga~~sG~~aA~~Il~~lg~~~~ 656 (658)
..+..... ..+ ++...+ ++||||||+++ +|.||+||+.||++||++|+++++...|
T Consensus 422 ~~~g~~~~~~~~-~~~~~~-~~~l~~aG~~~-~g~gv~gA~~SG~~aA~~i~~~l~~~~~ 478 (478)
T 2ivd_A 422 YNLGHLERVAAI-DAALQR-LPGLHLIGNAY-KGVGLNDCIRNAAQLADALVAGNTSHAP 478 (478)
T ss_dssp CBTTHHHHHHHH-HHHHHT-STTEEECSTTT-SCCSHHHHHHHHHHHHHHHCC-------
T ss_pred CCcCHHHHHHHH-HHHHhh-CCCEEEEccCC-CCCCHHHHHHHHHHHHHHHHHhhccCCC
Confidence 11110000 000 000112 68999999996 6889999999999999999988876543
No 7
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.97 E-value=5e-30 Score=284.44 Aligned_cols=427 Identities=16% Similarity=0.132 Sum_probs=263.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCcceeeEeeCCeEEccccccccCCcCCCchHHHHHHHHhcCCce
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEM 236 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~d~G~~~~~g~~~~~~~~~~~~ll~~lG~~~ 236 (658)
++||+|||||++||+||++|+++|++|+|+|+.+++||++.|++.+|+.+|.|++++++. ...+.++++++|+..
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~~-----~~~~~~~l~~lgl~~ 113 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHWH-----QSHVWREITRYKMHN 113 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBCTT-----SHHHHHHHHHTTCTT
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCeeecCCCeEecCc-----cHHHHHHHHHcCCcc
Confidence 489999999999999999999999999999999999999999999999999999998752 345778888899843
Q ss_pred eEeeC----CCeEEEEcCC--CcEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhh---hhcc-chhhH
Q 006176 237 EVIPD----PTTVHFHLPN--DLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLE---LKSL-EEPIY 306 (658)
Q Consensus 237 ~~~~~----~~~~~~~~~~--g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~ 306 (658)
+..+. .....+.+.+ +....++. ..... .+. .....+..+. .+.+ ..+.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~---------------~~~---~~~~~~~~~~~~~~~~~~~~~~- 172 (495)
T 2vvm_A 114 ALSPSFNFSRGVNHFQLRTNPTTSTYMTH--EAEDE---------------LLR---SALHKFTNVDGTNGRTVLPFPH- 172 (495)
T ss_dssp CEEESCCCSSSCCEEEEESSTTCCEEECH--HHHHH---------------HHH---HHHHHHHCSSSSTTTTTCSCTT-
T ss_pred eeecccccCCCceEEEecCCCCceeecCH--HHHHH---------------HHH---HHHHHHHccchhhhhhcCCCCC-
Confidence 33322 1111222222 33333221 11110 000 0011111000 0000 0000
Q ss_pred hhhhhhcChhhhhhHhhcccccHHHHHHHhc--CCHHHHHHHhhhhhhhccCCCCCchHHHHHHHHhH--------hhcC
Q 006176 307 LFGQFFKRPLECLTLAYYLPQNAGNIARKYI--KDPQLLSFIDAECFIVSTINALQTPMINASMVLCD--------RHFG 376 (658)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~--~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~--------~~~~ 376 (658)
.+........+...++.+++++.. .++.++.++........+.++...++......+.. ....
T Consensus 173 -------~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 245 (495)
T 2vvm_A 173 -------DMFYVPEFRKYDEMSYSERIDQIRDELSLNERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCL 245 (495)
T ss_dssp -------STTSSTTHHHHHTSBHHHHHHHHGGGCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHH
T ss_pred -------CcccCcchhhhhhhhHHHHHHHhhccCCHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhh
Confidence 000001122345678888898876 66777777776665555566666665443322111 0112
Q ss_pred CccccCCChHHHHHHHHHHHHHcC-cEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHHHhhccCCCCCC
Q 006176 377 GINYPVGGVGGIAKSLAKGLADKG-SEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLP 455 (658)
Q Consensus 377 g~~~p~gG~~~l~~~L~~~l~~~G-~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~~Ll~~~~lp 455 (658)
+.+.+.||++.++++|.+.+.+.| ++|+++++|++|..+++++. |++.+|+++.||+||+|+|+..+ ..++..+.+|
T Consensus 246 ~~~~~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~-v~~~~g~~~~ad~vI~a~~~~~l-~~i~~~p~lp 323 (495)
T 2vvm_A 246 MSYKFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAAR-VTARDGREFVAKRVVCTIPLNVL-STIQFSPALS 323 (495)
T ss_dssp HSEEETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEE-EEETTCCEEEEEEEEECCCGGGG-GGSEEESCCC
T ss_pred ceEEeCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEE-EEECCCCEEEcCEEEECCCHHHH-hheeeCCCCC
Confidence 456789999999999999999999 99999999999998877764 88888988999999999998775 4554345688
Q ss_pred hHHHHHHHhhccCCceEEEEEeeecCcCCCCCCcceeeecchhhhhccCCCceEEeccCCCCCCCCCCCceEEEEEeccc
Q 006176 456 KEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICS 535 (658)
Q Consensus 456 ~~~~~~~~~~~~~~s~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G~~~l~~~~~~~ 535 (658)
..+.+.+..+.+. +..++++.++++.|. . ...+... +.+...++. ....|+|..++..+....
T Consensus 324 ~~~~~ai~~~~~~-~~~kv~l~~~~~~~~-~--~~g~~~~------~~~~~~~~~-------~~~~~~~~~vl~~~~~~~ 386 (495)
T 2vvm_A 324 TERISAMQAGHVS-MCTKVHAEVDNKDMR-S--WTGIAYP------FNKLCYAIG-------DGTTPAGNTHLVCFGNSA 386 (495)
T ss_dssp HHHHHHHHHCCCC-CCEEEEEEESCGGGG-G--EEEEECS------SCSSCEEEE-------EEECTTSCEEEEEEECST
T ss_pred HHHHHHHHhcCCC-ceeEEEEEECCccCC-C--ceeEecC------CCCcEEEec-------CCCCCCCCeEEEEEeCcc
Confidence 8777776666544 467999999887642 1 1111111 123322221 112355666666554321
Q ss_pred cchhcccChhhhHHHHHHHHHHHHHHHHHhhCCCCcCcEEEEEecChhHHHHHhcCCCCcccCCCCCCCCCCCCCCCCCC
Q 006176 536 IEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLKQSIAFREIGSPKTHRRYLARDQGTYGPMPRGTPKGLLGMPFNTT 615 (658)
Q Consensus 536 ~~~w~~l~~~~~~~~ke~~~~~il~~L~~~~~P~l~~~i~~~~~~tP~~~~~~~~~~~G~yg~~p~~~~~~~~~~p~~~t 615 (658)
.. +.+ ++..+.+++.|+ +++|+.. .+....+ ..|.+ .....|+|...+.+.... .++..++
T Consensus 387 -~~---~~~-------~e~~~~~~~~L~-~~~~~~~-~~~~~~~---~~W~~-dp~~~g~y~~~~~g~~~~--~~~~l~~ 447 (495)
T 2vvm_A 387 -NH---IQP-------DEDVRETLKAVG-QLAPGTF-GVKRLVF---HNWVK-DEFAKGAWFFSRPGMVSE--CLQGLRE 447 (495)
T ss_dssp -TC---CCT-------TTCHHHHHHHHH-TTSTTSC-CEEEEEE---CCTTT-CTTTSSSSCCCCTTHHHH--HHHHHHC
T ss_pred -cc---CCC-------HHHHHHHHHHHH-HhcCCCC-CceEEEE---eEcCC-CCCCCCCccCcCCCcchh--hHHHHhC
Confidence 11 211 234566788898 8888642 2222221 11211 011135554332211100 0122246
Q ss_pred CCCcEEEeCCCccC--CCChhHHhhhHHHHHHHHHHHhccc
Q 006176 616 GINGLYCVGDSCFP--GQGVIAVAFSGVMCAHRVAADIGNR 654 (658)
Q Consensus 616 ~i~gLylaG~~~~p--G~Gv~ga~~sG~~aA~~Il~~lg~~ 654 (658)
|++||||||+++.+ .+.|+||+.||++||++|++.++..
T Consensus 448 p~~~l~fAGe~t~~~~~g~veGAi~SG~raA~~i~~~l~~~ 488 (495)
T 2vvm_A 448 KHGGVVFANSDWALGWRSFIDGAIEEGTRAARVVLEELGTK 488 (495)
T ss_dssp CBTTEEECCGGGCSSSTTSHHHHHHHHHHHHHHHHHHHCCC
T ss_pred cCCCEEEechhhhcCCceEEEhHHHHHHHHHHHHHHHhccc
Confidence 78999999999864 3579999999999999999999754
No 8
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.97 E-value=1e-30 Score=290.57 Aligned_cols=432 Identities=14% Similarity=0.108 Sum_probs=263.7
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCcceeeEeeCCeEEccccccccCCcCCCchHHHHHHHHhcCCc
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCE 235 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~d~G~~~~~g~~~~~~~~~~~~ll~~lG~~ 235 (658)
..+||+|||||++||+||++|+++|++|+|+|+.+.+||++.++..+|+.+|.|++++.. ....+.++++++|+.
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~-----~~~~~~~~~~~lgl~ 86 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTE-----SEGDVTFLIDSLGLR 86 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCC-----CSHHHHHHHHHTTCG
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCccccc-----CcHHHHHHHHHcCCc
Confidence 358999999999999999999999999999999999999999999999999999999874 234678899999987
Q ss_pred eeEee-CCCeEEEEcCCCcEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHhhhhhhcC
Q 006176 236 MEVIP-DPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKR 314 (658)
Q Consensus 236 ~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (658)
..... ......+.+.+|..+.++.+...+... .+-.....+.... . .+... ...
T Consensus 87 ~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~---~~~~~~~~~~~~~-------~---~~~~~-~~~----------- 141 (504)
T 1sez_A 87 EKQQFPLSQNKRYIARNGTPVLLPSNPIDLIKS---NFLSTGSKLQMLL-------E---PILWK-NKK----------- 141 (504)
T ss_dssp GGEECCSSCCCEEEESSSSEEECCSSHHHHHHS---SSSCHHHHHHHHT-------H---HHHC----------------
T ss_pred ccceeccCCCceEEEECCeEEECCCCHHHHhcc---ccCCHHHHHHHhH-------h---hhccC-ccc-----------
Confidence 54332 222234455677776666655433221 0100001111000 0 00000 000
Q ss_pred hhhhhhHhhcccccHHHHHHHhcCCHHHHHHHhhhhhhhccCCCCCchHHHHH--HHH-------------hHh------
Q 006176 315 PLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINAS--MVL-------------CDR------ 373 (658)
Q Consensus 315 ~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~--~~~-------------~~~------ 373 (658)
.. .......++.+++++.+.++.++.++...+....+.++.+.++.... +.. ...
T Consensus 142 ~~----~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 217 (504)
T 1sez_A 142 LS----QVSDSHESVSGFFQRHFGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNE 217 (504)
T ss_dssp ----------CCCBHHHHHHHHHCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----
T ss_pred cc----ccCCCCccHHHHHHHHcCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhccccc
Confidence 00 00123467888888888877777777655443334455554432110 000 000
Q ss_pred -------------hcCCccccCCChHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEE-----EEEEEC--CC---cEE
Q 006176 374 -------------HFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKA-----VGVRLS--DG---REF 430 (658)
Q Consensus 374 -------------~~~g~~~p~gG~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v-----~gV~~~--~G---~~i 430 (658)
...+.++++||++.|+++|++.+.+ ++|++|++|++|..++++. +.|++. +| +++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~GG~~~l~~~l~~~l~~--~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~ 295 (504)
T 1sez_A 218 KKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICKDLRE--DELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEE 295 (504)
T ss_dssp ------CCCSCCSTTCSCBEETTCTHHHHHHHHTTSCT--TTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCC
T ss_pred ccccccchhhccccCCceEeeCcHHHHHHHHHHhhccc--ceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeE
Confidence 1124778999999999999876521 7899999999999887761 346664 45 578
Q ss_pred EcCEEEECCChhHHHhhccCC---CCCChHHHHHHHhhccCCceEEEEEeeecCcCCCCCCcceeeecchhhhhccCCCc
Q 006176 431 YAKTIISNATRWDTFGKLLKG---EQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGS 507 (658)
Q Consensus 431 ~ad~VV~a~g~~~~~~~Ll~~---~~lp~~~~~~~~~~~~~~s~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (658)
.||+||+|+++..+. +++.. .+++... +..+.+ .+..++++.++++.|+.....+++++++ ++.. .....
T Consensus 296 ~ad~VI~a~p~~~l~-~ll~~~~~~~~~~~~---l~~~~~-~~~~~v~l~~~~~~~~~~~~~~~~l~~~-~~~~-~g~~~ 368 (504)
T 1sez_A 296 SFDAVIMTAPLCDVK-SMKIAKRGNPFLLNF---IPEVDY-VPLSVVITTFKRENVKYPLEGFGVLVPS-KEQQ-HGLKT 368 (504)
T ss_dssp EESEEEECSCHHHHH-TSEEESSSSBCCCTT---SCCCCE-EEEEEEEEEEEGGGBSSCCCSSEEECCG-GGGG-GTCCS
T ss_pred ECCEEEECCCHHHHH-HHhhcccCCcccHHH---HhcCCC-CceEEEEEEEchhhcCCCCCceEEEcCC-CCCC-CCCcc
Confidence 999999999988765 55521 1233221 222222 2578899999998876555445555543 2110 01111
Q ss_pred eEEeccCCCCCCCCCCCceEEEEEeccc-cchhcccChhhhHHHHHHHHHHHHHHHHHhhCCCCcC---cEEEEEecChh
Q 006176 508 IFLSIPTVLDSSLAPEGHHILHIFTICS-IEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLKQ---SIAFREIGSPK 583 (658)
Q Consensus 508 ~~~~~~s~~d~~~ap~G~~~l~~~~~~~-~~~w~~l~~~~~~~~ke~~~~~il~~L~~~~~P~l~~---~i~~~~~~tP~ 583 (658)
.-+.+++..+|..+|+|+.++++++... ...|..+ .+|++.+.++++|+ +++|.-.. ..+..+- .
T Consensus 369 ~~~~~~s~~~~~~~p~g~~~l~~~~~g~~~~~~~~~-------~~ee~~~~v~~~L~-~~~g~~~~p~~~~~~~w~---~ 437 (504)
T 1sez_A 369 LGTLFSSMMFPDRAPNNVYLYTTFVGGSRNRELAKA-------SRTELKEIVTSDLK-QLLGAEGEPTYVNHLYWS---K 437 (504)
T ss_dssp SEEEEHHHHCGGGSCTTEEEEEEEEESTTCGGGTTC-------CHHHHHHHHHHHHH-HHHCBCSCCSSEEEEEEE---E
T ss_pred ceEEeeccccCCcCCCCCEEEEEEeCCCCcccccCC-------CHHHHHHHHHHHHH-HHhCCCCCCeEEEEeECC---C
Confidence 1122344556667788988777776543 2234333 35788999999999 77764211 1111110 0
Q ss_pred HHHHHhcCCCCcccCCCCCCCCCCCCCCCCCCCCCcEEEeCCCccCCCChhHHhhhHHHHHHHHHHHhcc
Q 006176 584 THRRYLARDQGTYGPMPRGTPKGLLGMPFNTTGINGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGN 653 (658)
Q Consensus 584 ~~~~~~~~~~G~yg~~p~~~~~~~~~~p~~~t~i~gLylaG~~~~pG~Gv~ga~~sG~~aA~~Il~~lg~ 653 (658)
. +.. +...|... .-..+...++++||||||+++. |.||++|+.||++||++|+++++.
T Consensus 438 ~---~p~-~~~g~~~~-------~~~~~~~~~~~~~l~~aG~~~~-g~~v~gai~sG~~aA~~il~~l~~ 495 (504)
T 1sez_A 438 A---FPL-YGHNYDSV-------LDAIDKMEKNLPGLFYAGNHRG-GLSVGKALSSGCNAADLVISYLES 495 (504)
T ss_dssp E---EEC-CCTTHHHH-------HHHHHHHHHHSTTEEECCSSSS-CSSHHHHHHHHHHHHHHHHHHHSS
T ss_pred C---CCc-cCcCHHHH-------HHHHHHHHHhCCCEEEEeecCC-CCCHHHHHHHHHHHHHHHHHHHhh
Confidence 0 000 00111100 0000112356789999999975 789999999999999999999864
No 9
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.97 E-value=3e-30 Score=283.98 Aligned_cols=430 Identities=15% Similarity=0.174 Sum_probs=253.6
Q ss_pred CccEEEECCChhHHHHHHHHHHcC------CeEEEEecCCCCCcceeeEeeCCeEEccccccccCCcCCCchHHHHHHHH
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKG------ARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALA 230 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g------~~v~~~e~~~~~gg~~~t~~~~g~~~d~G~~~~~g~~~~~~~~~~~~ll~ 230 (658)
++||+|||||++||+||++|+++| ++|+|||+.+++||++.|...+|+.+|.|++.+... ...+.++++
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~-----~~~~~~l~~ 79 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLER-----KKSAPQLVK 79 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEETT-----CTHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhhC-----CHHHHHHHH
Confidence 589999999999999999999999 999999999999999999999999999999988753 235778999
Q ss_pred hcCCceeEeeCCCeEEEEcCCCcEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHhhhh
Q 006176 231 AVGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQ 310 (658)
Q Consensus 231 ~lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (658)
++|+..+.........+.+.++....++..... ..|.. +..+... ....... .......
T Consensus 80 ~lgl~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-------~~p~~---~~~~~~~--~~~~~~~---------~~~~~~~ 138 (470)
T 3i6d_A 80 DLGLEHLLVNNATGQSYVLVNRTLHPMPKGAVM-------GIPTK---IAPFVST--GLFSLSG---------KARAAMD 138 (470)
T ss_dssp HTTCCTTEEECCCCCEEEECSSCEEECCC---------------------------------CC---------SHHHHHH
T ss_pred HcCCcceeecCCCCccEEEECCEEEECCCCccc-------CCcCc---hHHhhcc--CcCCHHH---------HHHHhcC
Confidence 999876554322222333345544444322100 00000 0000000 0000000 0000000
Q ss_pred hhcChhhhhhHhhcccccHHHHHHHhcCCHHHHHHHhhhhhhhccCCCCCchHHHHHHHHh-------------------
Q 006176 311 FFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLC------------------- 371 (658)
Q Consensus 311 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~------------------- 371 (658)
.+... .......++.+++++.+..+....++...+....+.++.+.++......+.
T Consensus 139 ~~~~~-----~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (470)
T 3i6d_A 139 FILPA-----SKTKDDQSLGEFFRRRVGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQ 213 (470)
T ss_dssp HHSCC-----CSSSSCCBHHHHHHHHSCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC------------------
T ss_pred cccCC-----CCCCCCcCHHHHHHHhcCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccc
Confidence 00000 011234567778877766666655555544333334444444321110000
Q ss_pred -------HhhcCCccccCCChHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHH
Q 006176 372 -------DRHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDT 444 (658)
Q Consensus 372 -------~~~~~g~~~p~gG~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~ 444 (658)
....+.++++.+|++.+++.|++.+.+ ++|+++++|++|..+++++. |++.+|+++.||+||+|++++.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~~~-v~~~~g~~~~ad~vi~a~p~~~~ 290 (470)
T 3i6d_A 214 GSGQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKL--TKVYKGTKVTKLSHSGSCYS-LELDNGVTLDADSVIVTAPHKAA 290 (470)
T ss_dssp -------------EEEETTCTHHHHHHHHHTCCS--EEEECSCCEEEEEECSSSEE-EEESSSCEEEESEEEECSCHHHH
T ss_pred cccccccccCCceEEEeCChHHHHHHHHHHhcCC--CEEEeCCceEEEEEcCCeEE-EEECCCCEEECCEEEECCCHHHH
Confidence 000124568899999999999988754 79999999999998887764 88999988999999999998876
Q ss_pred HhhccCCCCCChHHHHHHHhhccCCceEEEEEeeecCcCCCCCCcceeeecchhhhhccCCCceEEeccCCCCCCCCCCC
Q 006176 445 FGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEG 524 (658)
Q Consensus 445 ~~~Ll~~~~lp~~~~~~~~~~~~~~s~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G 524 (658)
.+++...++ ...+..+.+. ++.++++.++++.|+.......++++.+ .+....-+.+.+...+...|+|
T Consensus 291 -~~l~~~~~~----~~~~~~~~~~-~~~~v~l~~~~~~~~~~~~~~g~l~~~~-----~~~~~~~~~~~s~~~~~~~p~~ 359 (470)
T 3i6d_A 291 -AGMLSELPA----ISHLKNMHST-SVANVALGFPEGSVQMEHEGTGFVISRN-----SDFAITACTWTNKKWPHAAPEG 359 (470)
T ss_dssp -HHHTTTSTT----HHHHHTCEEE-EEEEEEEEESSTTCCCSSCSSEEEECST-----TCCSEEEEEEHHHHCGGGSCTT
T ss_pred -HHHcCCchh----hHHHhcCCCC-ceEEEEEEECchhcCCCCCCeEEEccCC-----CCCCceEEEEEcCcCCCcCCCC
Confidence 456654322 2344444433 4778999999988765433333444321 1111111233333345567788
Q ss_pred ceEEEEEeccc-cchhcccChhhhHHHHHHHHHHHHHHHHHhhCCCCcCcEEEEEecChhHHHHHhcCCCCcccCCCCCC
Q 006176 525 HHILHIFTICS-IEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLKQSIAFREIGSPKTHRRYLARDQGTYGPMPRGT 603 (658)
Q Consensus 525 ~~~l~~~~~~~-~~~w~~l~~~~~~~~ke~~~~~il~~L~~~~~P~l~~~i~~~~~~tP~~~~~~~~~~~G~yg~~p~~~ 603 (658)
..++.+++... ...+..+ .++++.+.+++.|+ +++|...+ ++...+ ..|..++...+.+.
T Consensus 360 ~~~l~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~-~~~g~~~~-p~~~~~----------~~w~~a~p~~~~g~ 420 (470)
T 3i6d_A 360 KTLLRAYVGKAGDESIVDL-------SDNDIINIVLEDLK-KVMNINGE-PEMTCV----------TRWHESMPQYHVGH 420 (470)
T ss_dssp CEEEEEEECCSSCCGGGTS-------CHHHHHHHHHHHHG-GGSCCCSC-CSEEEE----------EEEEEEEEECBTTH
T ss_pred CEEEEEEECCCCCccccCC-------CHHHHHHHHHHHHH-HHhCCCCC-ceEEEE----------EEcCCccCCCCCCH
Confidence 77777766432 1222222 35788999999999 88875432 221111 00111111011000
Q ss_pred CCCCC-CCCCCCCCCCcEEEeCCCccCCCChhHHhhhHHHHHHHHHHHh
Q 006176 604 PKGLL-GMPFNTTGINGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADI 651 (658)
Q Consensus 604 ~~~~~-~~p~~~t~i~gLylaG~~~~pG~Gv~ga~~sG~~aA~~Il~~l 651 (658)
..... .++...++++|||+||+++ .|.||++|+.||+.+|++|+++|
T Consensus 421 ~~~~~~~~~~l~~~~~~l~~aG~~~-~g~gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 421 KQRIKELREALASAYPGVYMTGASF-EGVGIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp HHHHHHHHHHHHHHSTTEEECSTTT-SCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCEEEEeecC-CCCCHHHHHHHHHHHHHHHHHHh
Confidence 00000 0011124568999999986 47899999999999999999887
No 10
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.96 E-value=1.8e-29 Score=278.48 Aligned_cols=429 Identities=15% Similarity=0.085 Sum_probs=245.5
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC--eEEEEecCCCCCcceeeEee-CCeEEccccccccCCcCCCchHHHHHHHHhcC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYVIPGGSSGYYER-DGYTFDVGSSVMFGFSDKGNLNLITQALAAVG 233 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~--~v~~~e~~~~~gg~~~t~~~-~g~~~d~G~~~~~g~~~~~~~~~~~~ll~~lG 233 (658)
++||+|||||++||+||++|+++|+ +|+|||+++++||++++... +|+.+|.|++.+..... ....+.++++++|
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~--~~~~~~~l~~~lg 79 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGA--LGARTLLLVSELG 79 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHH--HHHHHHHHHHHTT
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCc--ccHHHHHHHHHcC
Confidence 3699999999999999999999999 99999999999999999875 59999999998853211 1345778999999
Q ss_pred CceeEeeCCC-----eEEEEcCCCcEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHhh
Q 006176 234 CEMEVIPDPT-----TVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLF 308 (658)
Q Consensus 234 ~~~~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (658)
+..+...... ...+.+.++....++.....+...+. .+... .... .+
T Consensus 80 l~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~-~~~~~--~~~~-------------------------~~ 131 (477)
T 3nks_A 80 LDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGLLRPSP-PFSKP--LFWA-------------------------GL 131 (477)
T ss_dssp CGGGEEEECTTSHHHHCEEEEETTEEEECCCSSCC---CCT-TSCSC--SSHH-------------------------HH
T ss_pred CcceeeecCCCCchhcceEEEECCEEEECCCChhhcccccc-hhhhH--HHHH-------------------------HH
Confidence 8755443210 11222334555544433221111000 00000 0000 00
Q ss_pred hhhhcChhhhhhHhhcccccHHHHHHHhcCCHHHHHHHhhhhhhhccCCCCCchHHHHHHHHh-----------------
Q 006176 309 GQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLC----------------- 371 (658)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~----------------- 371 (658)
..+.... ......++.+++++.+..+....++........+..+.+.++......+.
T Consensus 132 ~~~~~~~------~~~~~~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~ 205 (477)
T 3nks_A 132 RELTKPR------GKEPDETVHSFAQRRLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGA 205 (477)
T ss_dssp TTTTSCC------CCSSCCBHHHHHHHHHCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-
T ss_pred HhhhcCC------CCCCCcCHHHHHHHhhCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhc
Confidence 0000000 01123456666666555554455544433333334455444322110000
Q ss_pred --------------HhhcCCccccCCChHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEE
Q 006176 372 --------------DRHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIIS 437 (658)
Q Consensus 372 --------------~~~~~g~~~p~gG~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~ 437 (658)
.....+.++++||++.++++|++.++++|++|+++++|++|..++++++.|++ ++.++.||+||+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~ 284 (477)
T 3nks_A 206 GRTPQPDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVIS 284 (477)
T ss_dssp ----CCCCHHHHHHHHTTCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEE
T ss_pred ccccCCchhhhhhhcccCccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEE
Confidence 00112467899999999999999999999999999999999987766345766 455799999999
Q ss_pred CCChhHHHhhccCCCCCChHHHHHHHhhccCCceEEEEEeeecCcCCCCCCcceeeecchhhhhccCCCceEEeccCCCC
Q 006176 438 NATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLD 517 (658)
Q Consensus 438 a~g~~~~~~~Ll~~~~lp~~~~~~~~~~~~~~s~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d 517 (658)
|++++.+ ..+++. .++...+.+..+.+. ++.++++.++++.|+... ..++++.. +....+-+.+.+...
T Consensus 285 a~p~~~~-~~ll~~--~~~~~~~~l~~~~~~-~~~~v~l~~~~~~~~~~~--~g~l~~~~-----~~~~~~~~~~~s~~~ 353 (477)
T 3nks_A 285 AIPASVL-SELLPA--EAAPLARALSAITAV-SVAVVNLQYQGAHLPVQG--FGHLVPSS-----EDPGVLGIVYDSVAF 353 (477)
T ss_dssp CSCHHHH-HHHSCG--GGHHHHHHHHTCCEE-EEEEEEEEETTCCCSSCS--SEEECCTT-----TCSSEEEEECHHHHC
T ss_pred CCCHHHH-HHhccc--cCHHHHHHHhcCCCC-cEEEEEEEECCCCCCCCC--ceEEccCC-----CCCCceEEEEecccc
Confidence 9998876 466653 333444444444433 567899999988765332 22223221 011112222333223
Q ss_pred CCCC-CCCceEEEEEeccc-cchhcccChhhhHHHHHHHHHHHHHHHHHhhCCCCcCcEEEEEecChhHHHHHhcCCCCc
Q 006176 518 SSLA-PEGHHILHIFTICS-IEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLKQSIAFREIGSPKTHRRYLARDQGT 595 (658)
Q Consensus 518 ~~~a-p~G~~~l~~~~~~~-~~~w~~l~~~~~~~~ke~~~~~il~~L~~~~~P~l~~~i~~~~~~tP~~~~~~~~~~~G~ 595 (658)
|... ++|...+.+++... ...+.+ +.++..++++.+.+++.|+ ++++. ...+....+ ..++.+.
T Consensus 354 ~~~~~~~~~~~l~~~~gg~~~~~~~~---~~~~~~~~~~~~~~~~~L~-~~~g~-~~~~~~~~v---------~rw~~a~ 419 (477)
T 3nks_A 354 PEQDGSPPGLRVTVMLGGSWLQTLEA---SGCVLSQELFQQRAQEAAA-TQLGL-KEMPSHCLV---------HLHKNCI 419 (477)
T ss_dssp GGGSTTTTCEEEEEEECHHHHHHHHH---SSCCCCHHHHHHHHHHHHH-HHHCC-CSCCSEEEE---------EEEEEEE
T ss_pred CCCCCCCCceEEEEEECCcccccccc---ccCCCCHHHHHHHHHHHHH-HHhCC-CCCCcEEEE---------EEcCCcc
Confidence 3222 34777777766432 111210 0112246888999999998 76632 222222211 0111111
Q ss_pred ccCCCCCCCCCCCC-CCCC-CCCCCcEEEeCCCccCCCChhHHhhhHHHHHHHHHHH
Q 006176 596 YGPMPRGTPKGLLG-MPFN-TTGINGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAAD 650 (658)
Q Consensus 596 yg~~p~~~~~~~~~-~p~~-~t~i~gLylaG~~~~pG~Gv~ga~~sG~~aA~~Il~~ 650 (658)
..+.+...+ ... .... ....+|||+||+| +.|.||++|+.||+.||++|+++
T Consensus 420 p~~~~g~~~--~~~~~~~~l~~~~~~l~l~G~~-~~G~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 420 PQYTLGHWQ--KLESARQFLTAHRLPLTLAGAS-YEGVAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp ECCBTTHHH--HHHHHHHHHHHTTCSEEECSTT-TSCCSHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCHHH--HHHHHHHHHHhcCCCEEEEccC-CCCCcHHHHHHHHHHHHHHHHhc
Confidence 111111000 000 0000 0113689999999 57999999999999999999875
No 11
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.96 E-value=1.4e-28 Score=271.24 Aligned_cols=423 Identities=17% Similarity=0.153 Sum_probs=249.8
Q ss_pred CccEEEECCChhHHHHHHHHHHcC--CeEEEEecCCCCCcceeeEeeCCeEEccccccccCCcCCCchHHHHHHHHhcCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKG--ARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGC 234 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g--~~v~~~e~~~~~gg~~~t~~~~g~~~d~G~~~~~g~~~~~~~~~~~~ll~~lG~ 234 (658)
++||+|||||++||++|++|+++| ++|+|+|+.+.+||++.+....|+.+|.|++.+... ...+.++++++|+
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~-----~~~~~~l~~~lg~ 78 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVAR-----KHILTDLIEAIGL 78 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETT-----STHHHHHHHHTTC
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhcc-----cHHHHHHHHHcCC
Confidence 589999999999999999999999 999999999999999999999999999999998753 3457889999999
Q ss_pred ceeEeeCCCeEEEEcCCCcEEEEcCC--------HHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhH
Q 006176 235 EMEVIPDPTTVHFHLPNDLSVRVHRE--------YSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIY 306 (658)
Q Consensus 235 ~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (658)
+.+.........+.+.++....++.. ...+.. ...-.....+ . ..+... ...
T Consensus 79 ~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~p~~~~~~~~---~~~~~~~~~~-----~---~~~~~~-----~~~---- 138 (475)
T 3lov_A 79 GEKLVRNNTSQAFILDTGGLHPIPKGAVMGIPTDLDLFRQ---TTLLTEEEKQ-----E---VADLLL-----HPS---- 138 (475)
T ss_dssp GGGEEECCCCCEEEEETTEEEECCSSEETTEESCHHHHTT---CSSSCHHHHH-----H---HHHHHH-----SCC----
T ss_pred cceEeecCCCceEEEECCEEEECCCcccccCcCchHHHhh---ccCCChhHHH-----H---hhCccc-----CCc----
Confidence 87655432222333334544443321 111110 0000000000 0 000000 000
Q ss_pred hhhhhhcChhhhhhHhhcccccHHHHHHHhcCCHHHHHHHhhhhhhhccCCCCCchHHHHH------------HHHh-H-
Q 006176 307 LFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINAS------------MVLC-D- 372 (658)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~------------~~~~-~- 372 (658)
. .........++.+++++.+..+....++...+....+..+.+.++.... +... .
T Consensus 139 -------~----~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~ 207 (475)
T 3lov_A 139 -------D----SLRIPEQDIPLGEYLRPRLGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRL 207 (475)
T ss_dssp -------T----TCCCCSSCCBHHHHHHHHHCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHH
T ss_pred -------c----cccCCCCCcCHHHHHHHHhCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 0 0000123456677777766655555555544433333444443321100 0000 0
Q ss_pred -h--------------hcCCccccCCChHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEE
Q 006176 373 -R--------------HFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIIS 437 (658)
Q Consensus 373 -~--------------~~~g~~~p~gG~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~ 437 (658)
. ....+++++||++.++++|++.+.+ ++|+++++|++|..+++++. |++.+| ++.||+||+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~~~-v~~~~g-~~~ad~vV~ 283 (475)
T 3lov_A 208 MRPLDQLPQTPQTTIKATGQFLSLETGLESLIERLEEVLER--SEIRLETPLLAISREDGRYR-LKTDHG-PEYADYVLL 283 (475)
T ss_dssp TCC--------------CCSEEEETTCHHHHHHHHHHHCSS--CEEESSCCCCEEEEETTEEE-EECTTC-CEEESEEEE
T ss_pred hcccccccccccccccCCCcEEeeCChHHHHHHHHHhhccC--CEEEcCCeeeEEEEeCCEEE-EEECCC-eEECCEEEE
Confidence 0 0234678999999999999988855 79999999999999888865 888888 799999999
Q ss_pred CCChhHHHhhccCCCCCChHHHHHHHhhccCCceEEEEEeeecCcCCCCCCcceeeecchhhhhccCCCceEEeccCCCC
Q 006176 438 NATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLD 517 (658)
Q Consensus 438 a~g~~~~~~~Ll~~~~lp~~~~~~~~~~~~~~s~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d 517 (658)
|++++.+ .+++....+ ..+..+.+. ++.++++.+++++ +.+.....++++.+ .+.....+.+.+...
T Consensus 284 a~p~~~~-~~ll~~~~~-----~~~~~~~~~-~~~~v~l~~~~~~-~~~~~g~g~l~~~~-----~~~~~~~~~~~s~~~ 350 (475)
T 3lov_A 284 TIPHPQV-VQLLPDAHL-----PELEQLTTH-STATVTMIFDQQQ-SLPIEGTGFVVNRR-----APYSITACTAIDQKW 350 (475)
T ss_dssp CSCHHHH-HHHCTTSCC-----HHHHTCCEE-EEEEEEEEEECCS-SCSSSSSEEEECTT-----SSCSEEEEEEHHHHC
T ss_pred CCCHHHH-HHHcCccCH-----HHHhcCCCC-eEEEEEEEECCcC-CCCCCCEEEEecCC-----CCCceEEEEEEcccC
Confidence 9998876 456665333 233444333 5678999999876 33322223333321 122112233444445
Q ss_pred CCCCCCCceEEEEEeccc-cchhcccChhhhHHHHHHHHHHHHHHHHHhhCCCCcCcEEEEEecChhHHHHHhcCCCCcc
Q 006176 518 SSLAPEGHHILHIFTICS-IEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLKQSIAFREIGSPKTHRRYLARDQGTY 596 (658)
Q Consensus 518 ~~~ap~G~~~l~~~~~~~-~~~w~~l~~~~~~~~ke~~~~~il~~L~~~~~P~l~~~i~~~~~~tP~~~~~~~~~~~G~y 596 (658)
+...|+ ...+.+++... ...+.+ ..+|++.+.+++.|+ ++++.- ..++...+ .. |..++
T Consensus 351 ~~~~p~-~~~l~~~~~~~~~~~~~~-------~~~e~~~~~~~~~L~-~~~g~~-~~p~~~~v---------~~-w~~a~ 410 (475)
T 3lov_A 351 NHSAPD-HTVLRAFVGRPGNDHLVH-------ESDEVLQQAVLQDLE-KICGRT-LEPKQVII---------SR-LMDGL 410 (475)
T ss_dssp TTTCTT-EEEEEEEECBTTBCGGGG-------SCHHHHHHHHHHHHH-HHHSSC-CCCSEEEE---------EE-EEEEE
T ss_pred CCCCCC-cEEEEEEeCCCCCCcccC-------CCHHHHHHHHHHHHH-HHhCCC-CCCeEEEE---------EE-cccCC
Confidence 556666 55666665332 122222 235788999999999 777532 22221111 00 01111
Q ss_pred c-CCCCCCCC-CCCCCCCCCCCCCcEEEeCCCccCCCChhHHhhhHHHHHHHHHHHhccc
Q 006176 597 G-PMPRGTPK-GLLGMPFNTTGINGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGNR 654 (658)
Q Consensus 597 g-~~p~~~~~-~~~~~p~~~t~i~gLylaG~~~~pG~Gv~ga~~sG~~aA~~Il~~lg~~ 654 (658)
. ..+..... ..+ ++...++++|||+||+++. |.||++|+.||+.+|++|+++++..
T Consensus 411 p~~~~g~~~~~~~~-~~~l~~~~~~l~~aG~~~~-g~g~~~a~~sG~~aA~~i~~~l~~~ 468 (475)
T 3lov_A 411 PAYTVGHADRIQRV-REEVLAQYPGIYLAGLAYD-GVGLPDCVASAKTMIESIELEQSHT 468 (475)
T ss_dssp ECCCTTHHHHHHHH-HHHHHHHSTTEEECSTTTS-CSSHHHHHHHHHHHHHHHHHTC---
T ss_pred CCCCCChHHHHHHH-HHHHHhhCCCEEEEccCCC-CCCHHHHHHHHHHHHHHHHHHhhcc
Confidence 1 11110000 000 0111245689999999864 7899999999999999999998753
No 12
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.96 E-value=1.4e-27 Score=262.99 Aligned_cols=432 Identities=15% Similarity=0.130 Sum_probs=246.0
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC-eEEEEecCCCCCcceeeEeeCCeEEccccccccCCcCCCchHHHHHHHHh-cC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAA-VG 233 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~~~gg~~~t~~~~g~~~d~G~~~~~g~~~~~~~~~~~~ll~~-lG 233 (658)
..+||+|||||++||++|+.|+++|+ +|+|+|+.+.+||++.+....|+.+|.|++++.+.... ..+.+.+++++ +|
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~~~~d~g~~~~~~~~~~-~~~~~~~~~~~~lg 81 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAGINVELGANWVEGVNGG-KMNPIWPIVNSTLK 81 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETTEEEESSCCEEEEESSS-SCCTHHHHHHTTSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCCcEEeeCCeEEeccCCC-CCCHHHHHHHhhcC
Confidence 35799999999999999999999999 89999999999999999999999999999999853321 12236788888 88
Q ss_pred CceeEeeCC-CeEEEEcCCCcEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHhhhhhh
Q 006176 234 CEMEVIPDP-TTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFF 312 (658)
Q Consensus 234 ~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (658)
+........ ....+...+|..+. .... ..+... ...+..+.. .+.. .+..
T Consensus 82 l~~~~~~~~~~~~~~~~~~g~~~~----~~~~-~~~~~~----~~~~~~~~~-------~~~~----~~~~--------- 132 (472)
T 1b37_A 82 LRNFRSDFDYLAQNVYKEDGGVYD----EDYV-QKRIEL----ADSVEEMGE-------KLSA----TLHA--------- 132 (472)
T ss_dssp CCEEECCCTTGGGCEECSSSSBCC----HHHH-HHHHHH----HHHHHHHHH-------HHHH----TSCT---------
T ss_pred CceeeccCccccceeEcCCCCCCC----HHHH-HHHHHH----HHHHHHHHH-------HHHH----hhcc---------
Confidence 865322111 11112222333211 1111 000000 000111111 0000 0000
Q ss_pred cChhhhhhHhhcccccHH--HHHHHhcC---CHHHHHHHhhhhh-hhccCCCCCchHHHH--HHHHhHhhcCCcc--ccC
Q 006176 313 KRPLECLTLAYYLPQNAG--NIARKYIK---DPQLLSFIDAECF-IVSTINALQTPMINA--SMVLCDRHFGGIN--YPV 382 (658)
Q Consensus 313 ~~~~~~~~~~~~~~~s~~--~~~~~~~~---~~~l~~~l~~~~~-~~~~~~~~~~p~~~~--~~~~~~~~~~g~~--~p~ 382 (658)
... ...+.. ..+.+... ...+..+++.... ......+...+.... ...+ .....+.+ .+.
T Consensus 133 -~~~--------~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~-~~~~~~~~~~~~~ 202 (472)
T 1b37_A 133 -SGR--------DDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTVPLATF-SDFGDDVYFVADQ 202 (472)
T ss_dssp -TCT--------TCCBHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCGGGBBSTTTSSCHHH-HHHCSEEEEECCT
T ss_pred -ccc--------hhhhHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccccccchhhccccccc-cccCCceeeeecC
Confidence 000 000110 01111110 0001111111110 000111111111000 0000 01112222 347
Q ss_pred CChHHHHHHHHHHHHHc--------CcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHHHhhccC-CCC
Q 006176 383 GGVGGIAKSLAKGLADK--------GSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLK-GEQ 453 (658)
Q Consensus 383 gG~~~l~~~L~~~l~~~--------G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~~Ll~-~~~ 453 (658)
||++.++++|++.+.+. |++|+++++|++|..++++++ |++.+|+++.||+||+|++++.+...++. .+.
T Consensus 203 gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~-v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~ 281 (472)
T 1b37_A 203 RGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVT-VKTEDNSVYSADYVMVSASLGVLQSDLIQFKPK 281 (472)
T ss_dssp TCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEE-EEETTSCEEEESEEEECSCHHHHHTTSSEEESC
T ss_pred CcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEE-EEECCCCEEEcCEEEEecCHHHhccCCeeECCC
Confidence 99999999999988765 789999999999999888876 88999988999999999998776433321 356
Q ss_pred CChHHHHHHHhhccCCceEEEEEeeecCcCCCCCCcceeeecchhhhhccCCCceEEeccCCCCCCCCCCCceEEEEEec
Q 006176 454 LPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTI 533 (658)
Q Consensus 454 lp~~~~~~~~~~~~~~s~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G~~~l~~~~~ 533 (658)
+|..+.+.+..+.+. ...+|++.+++++|+.+.....++..+. ...+..++.. .|+. .| |.+++.+++.
T Consensus 282 Lp~~~~~ai~~~~~~-~~~kv~l~~~~~~w~~~~~~~~~~~~~~----~~~~~~~~~~----~~~~-~p-~~~~l~~~~~ 350 (472)
T 1b37_A 282 LPTWKVRAIYQFDMA-VYTKIFLKFPRKFWPEGKGREFFLYASS----RRGYYGVWQE----FEKQ-YP-DANVLLVTVT 350 (472)
T ss_dssp CCHHHHHHHHHSEEE-CEEEEEEECSSCCSCCSTTCSEEEECCS----STTSSCEEEE----CTTT-ST-TCCEEEEEEE
T ss_pred CCHHHHHHHHhcCCc-ceeEEEEECCCcCCCCCCCcceEEeccc----CCccceeeec----ccCC-CC-CCCEEEEEec
Confidence 888777777766554 4679999999988865322112222211 0111123322 1322 33 5566666553
Q ss_pred cc-cchhcccChhhhHHHHHHHHHHHHHHHHHhhCCCCc-CcEEEEEecChhHHHHHhcCCCCcccCCCCCCCCCCCCCC
Q 006176 534 CS-IEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLK-QSIAFREIGSPKTHRRYLARDQGTYGPMPRGTPKGLLGMP 611 (658)
Q Consensus 534 ~~-~~~w~~l~~~~~~~~ke~~~~~il~~L~~~~~P~l~-~~i~~~~~~tP~~~~~~~~~~~G~yg~~p~~~~~~~~~~p 611 (658)
.. ...|..+ .++++.+.+++.|+ +++|+.. ..++...+.++.+ .....|+|...+.+... ..++
T Consensus 351 ~~~a~~~~~~-------~~~e~~~~~l~~L~-~~~Pg~~~~~~~~~~~~~W~~----~~~~~G~~~~~~~g~~~--~~~~ 416 (472)
T 1b37_A 351 DEESRRIEQQ-------SDEQTKAEIMQVLR-KMFPGKDVPDATDILVPRWWS----DRFYKGTFSNWPVGVNR--YEYD 416 (472)
T ss_dssp HHHHHHHHTS-------CHHHHHHHHHHHHH-HHCTTSCCCCCSEEECCCTTT----CTTTSSSEEECBTTCCH--HHHH
T ss_pred hHHHHHHHhC-------CHHHHHHHHHHHHH-HHcCCCCCCCCceEEecccCC----CCCCCcccCCCCCCCCh--hHHH
Confidence 32 2234332 36889999999999 9999863 2223333333222 12235666543322110 0123
Q ss_pred CCCCCCCcEEEeCCCccC--CCChhHHhhhHHHHHHHHHHHhcc
Q 006176 612 FNTTGINGLYCVGDSCFP--GQGVIAVAFSGVMCAHRVAADIGN 653 (658)
Q Consensus 612 ~~~t~i~gLylaG~~~~p--G~Gv~ga~~sG~~aA~~Il~~lg~ 653 (658)
..++|++||||||+++++ +++|+||+.||++||++|+++++.
T Consensus 417 ~l~~p~~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~~l~~ 460 (472)
T 1b37_A 417 QLRAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQK 460 (472)
T ss_dssp HHHCCBTTEEECSGGGCTTTTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccCCcEEEeecccCCCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 346889999999999987 468999999999999999998864
No 13
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.96 E-value=5.5e-28 Score=267.61 Aligned_cols=425 Identities=14% Similarity=0.142 Sum_probs=242.3
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCcceeeEee-----------------CCeEEccccccccCCc
Q 006176 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYER-----------------DGYTFDVGSSVMFGFS 217 (658)
Q Consensus 155 ~~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~-----------------~g~~~d~G~~~~~g~~ 217 (658)
+..+||+|||||++||+||+.|+++|++|+|+|+.+++||++.+... +|..+|.|++.+...
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~- 87 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGSEETDLSGETQKCTFSEGHFYNVGATRIPQS- 87 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTCEEECTTSCEEECCCCTTCEEESSCCCEETT-
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCcccccccchhhhhcccCCCcCCcchhhcccH-
Confidence 34689999999999999999999999999999999999999988774 577889998887641
Q ss_pred CCCchHHHHHHHHhcCCceeEeeCCC-eEEEE-cCC----CcEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHH
Q 006176 218 DKGNLNLITQALAAVGCEMEVIPDPT-TVHFH-LPN----DLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFN 291 (658)
Q Consensus 218 ~~~~~~~~~~ll~~lG~~~~~~~~~~-~~~~~-~~~----g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~ 291 (658)
. .+.++++++|+..+...... ...+. ..+ |..+..+.....+ +.....+..
T Consensus 88 ----~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~------------------~~~~~~l~~ 144 (489)
T 2jae_A 88 ----H-ITLDYCRELGVEIQGFGNQNANTFVNYQSDTSLSGQSVTYRAAKADT------------------FGYMSELLK 144 (489)
T ss_dssp ----S-THHHHHHHHTCCEEEECCCCTTSEEECCCSSTTTTCCEEHHHHHHHH------------------HHHHHHHHH
T ss_pred ----H-HHHHHHHHcCCceEEccccCCCceEEecCCcccCCccccHHHHhhhh------------------hccHHHHHH
Confidence 2 57789999999865443221 11122 232 3333221111110 000000000
Q ss_pred HhhhhhhhccchhhHhhhhhhcChhhhhhHhhcccccHHHHHHHhcC--------CHHHHHHHhhhhh--hhcc-CCCCC
Q 006176 292 ALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIK--------DPQLLSFIDAECF--IVST-INALQ 360 (658)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~--------~~~l~~~l~~~~~--~~~~-~~~~~ 360 (658)
..... ..+..+. .+.+ ..++.++++++.. ...+..++..... ..+. ..+..
T Consensus 145 ~~~~~--~~~~~~~--------~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (489)
T 2jae_A 145 KATDQ--GALDQVL--------SRED--------KDALSEFLSDFGDLSDDGRYLGSSRRGYDSEPGAGLNFGTEKKPFA 206 (489)
T ss_dssp HHHHH--TTTTTTS--------CHHH--------HHHHHHHHHHHTTCCTTSCCCCCGGGCEEECCCBTTCCCEECCCCC
T ss_pred HHHhc--ccccccc--------chhh--------HHHHHHHHHHhhhhhhccccccccchhhccCCCcccccCCCCCCcC
Confidence 00000 0000000 0000 0112222222100 0000000000000 0000 00111
Q ss_pred chHHHHHHHH---h----HhhcCCccccCCChHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCC---cEE
Q 006176 361 TPMINASMVL---C----DRHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDG---REF 430 (658)
Q Consensus 361 ~p~~~~~~~~---~----~~~~~g~~~p~gG~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G---~~i 430 (658)
.....+.... . .....++++++||++.|+++|++.+.+ ++|++|++|++|..++++++ |++.+| +++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~v~-v~~~~g~~~~~~ 283 (489)
T 2jae_A 207 MQEVIRSGIGRNFSFDFGYDQAMMMFTPVGGMDRIYYAFQDRIGT--DNIVFGAEVTSMKNVSEGVT-VEYTAGGSKKSI 283 (489)
T ss_dssp HHHHHHHTTTTTGGGGGCTTTSSSEEEETTCTTHHHHHHHHHHCG--GGEETTCEEEEEEEETTEEE-EEEEETTEEEEE
T ss_pred HHHHhhhhHHHHHhhhhccccCccEEeecCCHHHHHHHHHHhcCC--CeEEECCEEEEEEEcCCeEE-EEEecCCeEEEE
Confidence 1111111000 0 011235778999999999999998843 78999999999999988876 777776 579
Q ss_pred EcCEEEECCChhHHHhhccCCCCCChHHHHHHHhhccCCceEEEEEeeecCcCCCCCCcc-eeeecchhhhhccCCCceE
Q 006176 431 YAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCH-HFVLEDDWNRLEEPYGSIF 509 (658)
Q Consensus 431 ~ad~VV~a~g~~~~~~~Ll~~~~lp~~~~~~~~~~~~~~s~~~v~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 509 (658)
.||+||+|+++..+ ..++. ++|....+.+..+.++ +..++++.+++++|+...... .+...+ .+. .+
T Consensus 284 ~ad~vI~a~p~~~l-~~l~~--~l~~~~~~~l~~~~~~-~~~kv~l~~~~~~w~~~~~~~g~~~~~~------~~~--~~ 351 (489)
T 2jae_A 284 TADYAICTIPPHLV-GRLQN--NLPGDVLTALKAAKPS-SSGKLGIEYSRRWWETEDRIYGGASNTD------KDI--SQ 351 (489)
T ss_dssp EESEEEECSCHHHH-TTSEE--CCCHHHHHHHHTEECC-CEEEEEEEESSCHHHHTTCCCSCEEEES------STT--CE
T ss_pred ECCEEEECCCHHHH-HhCcc--CCCHHHHHHHHhCCCc-cceEEEEEeCCCCccCCCCcccccccCC------CCc--eE
Confidence 99999999998754 55554 5887777777777665 568999999988765432211 121111 232 33
Q ss_pred EeccCCCCCCCCCCCceEEEEEecc-ccchhcccChhhhHHHHHHHHHHHHHHHHHhhCCC-CcCcEEEEEecChhHHHH
Q 006176 510 LSIPTVLDSSLAPEGHHILHIFTIC-SIEDWEGLAQKDYDAKKELVADEIINRLENKLFPG-LKQSIAFREIGSPKTHRR 587 (658)
Q Consensus 510 ~~~~s~~d~~~ap~G~~~l~~~~~~-~~~~w~~l~~~~~~~~ke~~~~~il~~L~~~~~P~-l~~~i~~~~~~tP~~~~~ 587 (658)
+..++..++ .|++ .++..++.. ....|..+ .++++.+.+++.|+ +++|. ++..++... +.+|.+
T Consensus 352 ~~~~s~~~~--~~~~-~l~~~~~~g~~~~~~~~~-------~~~~~~~~~l~~L~-~~~~~~~~~~~~~~~---~~~W~~ 417 (489)
T 2jae_A 352 IMFPYDHYN--SDRG-VVVAYYSSGKRQEAFESL-------THRQRLAKAIAEGS-EIHGEKYTRDISSSF---SGSWRR 417 (489)
T ss_dssp EECCSSSTT--SSCE-EEEEEEEETHHHHHHHTS-------CHHHHHHHHHHHHH-HHHCGGGGSSEEEEE---EEEGGG
T ss_pred EEeCCCCCC--CCCC-EEEEEeeCCchhhhhhcC-------CHHHHHHHHHHHHH-HHcCcchhhhccccE---EEEcCC
Confidence 444554332 2322 223234432 23345433 35788999999999 88887 766665432 233543
Q ss_pred HhcCCCCcccCC-------CCCCCCCCCCCCCCCCCCCcEEEeCCCc-cCCCChhHHhhhHHHHHHHHHHHhccc
Q 006176 588 YLARDQGTYGPM-------PRGTPKGLLGMPFNTTGINGLYCVGDSC-FPGQGVIAVAFSGVMCAHRVAADIGNR 654 (658)
Q Consensus 588 ~~~~~~G~yg~~-------p~~~~~~~~~~p~~~t~i~gLylaG~~~-~pG~Gv~ga~~sG~~aA~~Il~~lg~~ 654 (658)
.. ...|+|... |.... . .++...++++||||||+++ +.+.||+||+.||++||++|++.+..+
T Consensus 418 ~~-~~~G~~~~~~~~~~~~~~~~~-~--~~~~l~~~~~~l~faG~~~~~~~~~v~gAi~sg~~aA~~i~~~l~~~ 488 (489)
T 2jae_A 418 TK-YSESAWANWAGSGGSHGGAAT-P--EYEKLLEPVDKIYFAGDHLSNAIAWQHGALTSARDVVTHIHERVAQE 488 (489)
T ss_dssp ST-TTSCSSCEETTC-------CC-H--HHHHHTSCBTTEEECSGGGBSSTTSHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CC-CCCCcchhcccccCCCcccch-h--hHHHHhCCCCcEEEeEHHhccCccHHHHHHHHHHHHHHHHHHHHhhc
Confidence 22 234554322 22110 0 0122346789999999987 467899999999999999999887643
No 14
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.96 E-value=3.1e-27 Score=258.60 Aligned_cols=398 Identities=18% Similarity=0.198 Sum_probs=246.0
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCcceeeEeeCC-eE---------------EccccccccCCcC
Q 006176 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDG-YT---------------FDVGSSVMFGFSD 218 (658)
Q Consensus 155 ~~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g-~~---------------~d~G~~~~~g~~~ 218 (658)
+..+||+|||||++||+||+.|+++|++|+|+|+++.+||+++++..+| +. ++.|.++..++.+
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~P 88 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLIP 88 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESSC
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCccccCcchhcccccceeecccc
Confidence 3568999999999999999999999999999999999999999988766 32 3344444433221
Q ss_pred CC--chHHHHHHHHhcCCc--eeEeeCCCeEEEEcCCCcEEEEcCC-HHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHh
Q 006176 219 KG--NLNLITQALAAVGCE--MEVIPDPTTVHFHLPNDLSVRVHRE-YSDFVAELTSKFPHEKEGVLAFYGECWKIFNAL 293 (658)
Q Consensus 219 ~~--~~~~~~~ll~~lG~~--~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~ 293 (658)
.- ....+.++++++|+. ++..+....+. +.+|..+.++.+ .+.+...+...+ ++..+.+|+....+.
T Consensus 89 ~~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~--~~~g~~~~~p~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~---- 160 (453)
T 2bcg_G 89 KFLMANGELTNILIHTDVTRYVDFKQVSGSYV--FKQGKIYKVPANEIEAISSPLMGIF--EKRRMKKFLEWISSY---- 160 (453)
T ss_dssp CBEETTSHHHHHHHHHTGGGTCCEEECCCEEE--EETTEEEECCSSHHHHHHCTTSCHH--HHHHHHHHHHHHHHC----
T ss_pred ceeecCcHHHHHHHhcCCccceEEEEccceeE--EeCCeEEECCCChHHHHhhhccchh--hHHHHHHHHHHHHHh----
Confidence 10 234677888888874 23334333333 357777777777 555443332222 334444444432211
Q ss_pred hhhhhhccchhhHhhhhhhcChhhhhhHhhcccccHHHHHHHhcCCHHHHHHHhhhhhhhccCCCCCchHHHHH---HHH
Q 006176 294 NSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINAS---MVL 370 (658)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~---~~~ 370 (658)
... .+.. + ....+...++.+++++++.++.++.++...............|..... ..+
T Consensus 161 ---~~~---~p~~----~--------~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~l~~~~~~~~~p~~~~~~~~~~~ 222 (453)
T 2bcg_G 161 ---KED---DLST----H--------QGLDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDYLQQPARPSFERILLY 222 (453)
T ss_dssp ---BTT---BGGG----S--------TTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHH
T ss_pred ---ccC---Cchh----h--------hccccccCCHHHHHHHhCCCHHHHHHHHHHHHhccCccccCCchHHHHHHHHHH
Confidence 000 0000 0 000234578889999999999999887654332111001112332222 111
Q ss_pred h---Hhhc-CCccccCCChHHHHHHHHHHHHHcCcEEEeCceeeEEEEe--CCEEEEEEECCCcEEEcCEEEECCChhHH
Q 006176 371 C---DRHF-GGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILE--QGKAVGVRLSDGREFYAKTIISNATRWDT 444 (658)
Q Consensus 371 ~---~~~~-~g~~~p~gG~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~--~~~v~gV~~~~G~~i~ad~VV~a~g~~~~ 444 (658)
. ..+. +.+.+|+||++.++++|++.++++|++|+++++|++|..+ ++++++|++ +|+++.||.||+|++++..
T Consensus 223 ~~s~~~~~~~~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 223 CQSVARYGKSPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHHHHHSSCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHhhcCCceEeeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 1 1122 3345999999999999999999999999999999999998 888888887 5778999999999998742
Q ss_pred HhhccCCCCCChHHHHHHHhhc-cCCceEEEEEeeecCcCCC-CCCcceeeecchhhhhccCCCceEEeccCCCCCCCCC
Q 006176 445 FGKLLKGEQLPKEEENFQKLYV-KAPSFLSIHMGVKAEVLPP-DTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAP 522 (658)
Q Consensus 445 ~~~Ll~~~~lp~~~~~~~~~~~-~~~s~~~v~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap 522 (658)
++. .+. .+++.+++ ++.+.... ....+.++++.. .+ .+...+|++.++..| +++|
T Consensus 302 --~l~--------------~~~~~~~~~~~i---~~~~~~~~~~~~~~~ii~~~~--~~-~~~~~~~v~~~s~~d-~~aP 358 (453)
T 2bcg_G 302 --KCK--------------STGQRVIRAICI---LNHPVPNTSNADSLQIIIPQS--QL-GRKSDIYVAIVSDAH-NVCS 358 (453)
T ss_dssp --GEE--------------EEEEEEEEEEEE---ESSCCTTSTTCSSEEEEECGG--GT-TCSSCEEEEEEEGGG-TSSC
T ss_pred --hhc--------------ccCCcceeEEEE---EccccCCCCCCccEEEEeCcc--cc-CCCCCEEEEEeCCCC-CCCC
Confidence 221 112 23344443 56543211 122344455431 11 122358899998888 8999
Q ss_pred CCceEEEEEeccccchhcccChhhhHHHHHHHHHHHHHHHHHhhCCCCcCcEEEEEecChhHHHHHhcCCCCcccCCCCC
Q 006176 523 EGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLKQSIAFREIGSPKTHRRYLARDQGTYGPMPRG 602 (658)
Q Consensus 523 ~G~~~l~~~~~~~~~~w~~l~~~~~~~~ke~~~~~il~~L~~~~~P~l~~~i~~~~~~tP~~~~~~~~~~~G~yg~~p~~ 602 (658)
+|+++++++++.+..+ . .++ +...++ ++.|.....+...+ .|.+..
T Consensus 359 ~G~~~~~v~~~~~~~~-----~------~~~----l~~~~~-~l~~~~~~~~~~~~----------------~~~~~~-- 404 (453)
T 2bcg_G 359 KGHYLAIISTIIETDK-----P------HIE----LEPAFK-LLGPIEEKFMGIAE----------------LFEPRE-- 404 (453)
T ss_dssp TTCEEEEEEEECCSSC-----H------HHH----THHHHG-GGCSCSEEEEEEEE----------------EEEESS--
T ss_pred CCcEEEEEEEecCCCC-----H------HHH----HHHHHH-HhhhHHHhhccchh----------------eeeecC--
Confidence 9999999988875321 0 112 223444 55565333222211 121110
Q ss_pred CCCCCCCCCCCCCCCCcEEEeCCCccCCCChhHHhhhHHHHHHHHH
Q 006176 603 TPKGLLGMPFNTTGINGLYCVGDSCFPGQGVIAVAFSGVMCAHRVA 648 (658)
Q Consensus 603 ~~~~~~~~p~~~t~i~gLylaG~~~~pG~Gv~ga~~sG~~aA~~Il 648 (658)
...-+|+|+||++- ....+++++.+++.++++|+
T Consensus 405 -----------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 438 (453)
T 2bcg_G 405 -----------DGSKDNIYLSRSYD-ASSHFESMTDDVKDIYFRVT 438 (453)
T ss_dssp -----------CSTTTSEEECCCCC-SCSBSHHHHHHHHHHHHHHH
T ss_pred -----------CCCCCCEEECCCCC-ccccHHHHHHHHHHHHHHHH
Confidence 12237999999974 44678999999999999997
No 15
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.95 E-value=5.3e-27 Score=260.28 Aligned_cols=435 Identities=16% Similarity=0.143 Sum_probs=245.4
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCcceeeEe--eCCeEEccccccccCCcCCCchHHHHHHHHhcC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYE--RDGYTFDVGSSVMFGFSDKGNLNLITQALAAVG 233 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~--~~g~~~d~G~~~~~g~~~~~~~~~~~~ll~~lG 233 (658)
..+||+|||||++||++|+.|+++|++|+|+|+.+++||++.++. ..|+.+|.|++++.. ....+.++++++|
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~g 106 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPE-----KHRIVREYIRKFD 106 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEET-----TCHHHHHHHHHTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccc-----hHHHHHHHHHHhC
Confidence 467999999999999999999999999999999999999999887 568999999998864 3457889999999
Q ss_pred CceeEeeCCCeEEEEcCCCcEEEEcCCHHHHHHHHHH-hCCC---cH-HHHHHHHHH-HHHHHHHhhhhhhhccchhhHh
Q 006176 234 CEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTS-KFPH---EK-EGVLAFYGE-CWKIFNALNSLELKSLEEPIYL 307 (658)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~-~~p~---~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 307 (658)
+............+...++..... ..+...... .++. .. .....++.. ..+....+..+..
T Consensus 107 ~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 173 (498)
T 2iid_A 107 LRLNEFSQENDNAWYFIKNIRKKV----GEVKKDPGLLKYPVKPSEAGKSAGQLYEESLGKVVEELKRTNC--------- 173 (498)
T ss_dssp CCEEEECSCCTTSEEEETTEEEEH----HHHHHCGGGGCCCCCGGGTTCCHHHHHHHHTHHHHHHHHHSCH---------
T ss_pred CCceeecccCCccEEEeCCeeecc----cccccCccccccCCCccccCCCHHHHHHHHHHHHHHHHhhccH---------
Confidence 875433211100001112221111 000000000 0000 00 001111111 0110110000000
Q ss_pred hhhhhcChhhhhhHhhcccccHHHHHHHhcC-CHHHHHHHhhhhhhhccCCCCCchHHHHHHHH-hHhhcCCccccCCCh
Q 006176 308 FGQFFKRPLECLTLAYYLPQNAGNIARKYIK-DPQLLSFIDAECFIVSTINALQTPMINASMVL-CDRHFGGINYPVGGV 385 (658)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~-~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~g~~~p~gG~ 385 (658)
......+...++.+++.+... ++.....+........ ............. .......++++.||+
T Consensus 174 ----------~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~gG~ 240 (498)
T 2iid_A 174 ----------SYILNKYDTYSTKEYLIKEGDLSPGAVDMIGDLLNEDS---GYYVSFIESLKHDDIFAYEKRFDEIVDGM 240 (498)
T ss_dssp ----------HHHHHHHTTSBHHHHHHHTSCCCHHHHHHHHHHTTCGG---GTTSBHHHHHHHHHHHTTCCCEEEETTCT
T ss_pred ----------HHHHHHhhhhhHHHHHHHccCCCHHHHHHHHHhcCccc---chhHHHHHHHHHHhccccCcceEEeCCcH
Confidence 000112234556666665432 3333222221110000 0001111111100 111223566899999
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCc----EEEcCEEEECCChhHHHhhccCCCCCChHHHHH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGR----EFYAKTIISNATRWDTFGKLLKGEQLPKEEENF 461 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~----~i~ad~VV~a~g~~~~~~~Ll~~~~lp~~~~~~ 461 (658)
+.++++|++.+.+ +|++|++|++|..+++++. |++.+|+ ++.||+||+|+++..+ ..+.-.+.+|..+.+.
T Consensus 241 ~~l~~~l~~~l~~---~i~~~~~V~~I~~~~~~v~-v~~~~~~~~~~~~~ad~vI~t~p~~~~-~~i~f~p~Lp~~~~~a 315 (498)
T 2iid_A 241 DKLPTAMYRDIQD---KVHFNAQVIKIQQNDQKVT-VVYETLSKETPSVTADYVIVCTTSRAV-RLIKFNPPLLPKKAHA 315 (498)
T ss_dssp THHHHHHHHHTGG---GEESSCEEEEEEECSSCEE-EEEECSSSCCCEEEESEEEECSCHHHH-TTSEEESCCCHHHHHH
T ss_pred HHHHHHHHHhccc---ccccCCEEEEEEECCCeEE-EEEecCCcccceEEeCEEEECCChHHH-hheecCCCCCHHHHHH
Confidence 9999999988854 8999999999999887764 7776665 4899999999998754 4543334699888777
Q ss_pred HHhhccCCceEEEEEeeecCcCCCCCCcceeeecchhhhhccCCCceEEeccCCCCCCCCCCCceEEEEEeccc-cchhc
Q 006176 462 QKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICS-IEDWE 540 (658)
Q Consensus 462 ~~~~~~~~s~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G~~~l~~~~~~~-~~~w~ 540 (658)
+..+.+++ ..+|++.+++++|+.+-......+.+ .+. .++.+++. ..|+|..++..++... ...|.
T Consensus 316 i~~l~~~~-~~kv~l~~~~~~w~~~~~~~~~~~~~------~~~--~~~~~~s~----~~p~g~~~L~~~~~g~~a~~~~ 382 (498)
T 2iid_A 316 LRSVHYRS-GTKIFLTCTTKFWEDDGIHGGKSTTD------LPS--RFIYYPNH----NFTNGVGVIIAYGIGDDANFFQ 382 (498)
T ss_dssp HHHCCEEC-EEEEEEEESSCGGGGGTCCSSEEEES------STT--CEEECCSS----CCTTSCEEEEEEEEHHHHHTTT
T ss_pred HHhCCCcc-eeEEEEEeCCCCccCCCccCCcccCC------CCc--ceEEECCC----CCCCCCcEEEEEeCCccHhhhh
Confidence 77777665 66999999998875421111111111 122 23444431 2466777776655432 22343
Q ss_pred ccChhhhHHHHHHHHHHHHHHHHHhhCCCCcCc----EEEEEecChhHHHHHhcCCCCcccCCCCCCCCCCCCCCCCCCC
Q 006176 541 GLAQKDYDAKKELVADEIINRLENKLFPGLKQS----IAFREIGSPKTHRRYLARDQGTYGPMPRGTPKGLLGMPFNTTG 616 (658)
Q Consensus 541 ~l~~~~~~~~ke~~~~~il~~L~~~~~P~l~~~----i~~~~~~tP~~~~~~~~~~~G~yg~~p~~~~~~~~~~p~~~t~ 616 (658)
.+ .++++.+.+++.|+ ++++..... .....+ ..|.+ .....|+|...+.+.... + .+...++
T Consensus 383 ~~-------~~~~~~~~~l~~L~-~~~g~~~~~~~~~~~~~~~---~~W~~-~p~~~G~~~~~~~~~~~~-~-~~~l~~p 448 (498)
T 2iid_A 383 AL-------DFKDCADIVFNDLS-LIHQLPKKDIQSFCYPSVI---QKWSL-DKYAMGGITTFTPYQFQH-F-SDPLTAS 448 (498)
T ss_dssp TS-------CHHHHHHHHHHHHH-HHHTCCHHHHHHHEEEEEE---EEGGG-CTTTCSSEECCCTTHHHH-H-HHHHHCC
T ss_pred cC-------CHHHHHHHHHHHHH-HHcCCChhhhhhhcCccEE---EecCC-CCCCCceeeecCCcchHH-H-HHHHhCC
Confidence 33 24678888999998 777521111 010000 11222 112355665332211100 0 1122457
Q ss_pred CCcEEEeCCCccC-CCChhHHhhhHHHHHHHHHHHhcc
Q 006176 617 INGLYCVGDSCFP-GQGVIAVAFSGVMCAHRVAADIGN 653 (658)
Q Consensus 617 i~gLylaG~~~~p-G~Gv~ga~~sG~~aA~~Il~~lg~ 653 (658)
++||||||+++.. .++|+||+.||++||++|++.++.
T Consensus 449 ~~~l~fAGe~t~~~~g~~~GAi~SG~raA~~i~~~l~~ 486 (498)
T 2iid_A 449 QGRIYFAGEYTAQAHGWIDSTIKSGLRAARDVNLASEN 486 (498)
T ss_dssp BTTEEECSGGGSSSSSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCcEEEEEcccccCCcCHHHHHHHHHHHHHHHHHHhcC
Confidence 8999999999843 357999999999999999998864
No 16
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.95 E-value=2.8e-26 Score=249.50 Aligned_cols=391 Identities=16% Similarity=0.259 Sum_probs=247.5
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCcceeeEe--e-------------------CCeEEcccccccc
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYE--R-------------------DGYTFDVGSSVMF 214 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~--~-------------------~g~~~d~G~~~~~ 214 (658)
..+||+|||+|++||++|+.|+++|++|+|+|+++.+||++.|+. . .++.+|.|++++.
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~l~ 84 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFLM 84 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCBEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcceee
Confidence 468999999999999999999999999999999999999999988 1 3467788877775
Q ss_pred CCcCCCchHHHHHHHHhcCCc--eeEeeCCCeEEEEcCCCcEEEEcCCH-HHHHHHHHHhCCCcHHHHHHHHHHHHHHHH
Q 006176 215 GFSDKGNLNLITQALAAVGCE--MEVIPDPTTVHFHLPNDLSVRVHREY-SDFVAELTSKFPHEKEGVLAFYGECWKIFN 291 (658)
Q Consensus 215 g~~~~~~~~~~~~ll~~lG~~--~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~ 291 (658)
. ...+.++++++|+. ++..+... .+.+.+|..+.++.+. +.+...+...+ ++..+.+|+....+
T Consensus 85 ~------~~~l~~ll~~lgl~~~l~~~~~~~--~~~~~~g~~~~~p~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~--- 151 (433)
T 1d5t_A 85 A------NGQLVKMLLYTEVTRYLDFKVVEG--SFVYKGGKIYKVPSTETEALASNLMGMF--EKRRFRKFLVFVAN--- 151 (433)
T ss_dssp T------TSHHHHHHHHHTGGGGCCEEECCE--EEEEETTEEEECCCSHHHHHHCSSSCHH--HHHHHHHHHHHHHH---
T ss_pred c------cchHHHHHHHcCCccceEEEEeCc--eEEeeCCEEEECCCCHHHHhhCcccChh--hHHHHHHHHHHHHh---
Confidence 3 23567888888875 23333332 2334577777777764 44433322222 33344444433221
Q ss_pred HhhhhhhhccchhhHhhhhhhcChhhhhhHhhcccccHHHHHHHhcCCHHHHHHHhhhhhhhccCCCCCchHHHHHH---
Q 006176 292 ALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASM--- 368 (658)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~--- 368 (658)
+... .+.. .....+...++.+++++++.++.++.++........+..+...|+.....
T Consensus 152 ----~~~~---~p~~------------~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~ 212 (433)
T 1d5t_A 152 ----FDEN---DPKT------------FEGVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIK 212 (433)
T ss_dssp ----CCTT---CGGG------------GTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBSHHHHHHHH
T ss_pred ----hccc---Cchh------------ccccccccCCHHHHHHHcCCCHHHHHHHHHHHHhccCCCccCCCHHHHHHHHH
Confidence 0000 0000 00112346788999999999999998876543222222333444432221
Q ss_pred HHhHh---h-cCCccccCCChHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHH
Q 006176 369 VLCDR---H-FGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDT 444 (658)
Q Consensus 369 ~~~~~---~-~~g~~~p~gG~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~ 444 (658)
.+... + .+.+++|+||++.++++|.+.++++|++|+++++|++|..+++++++|+. +|+++.||+||+|++++..
T Consensus 213 ~~~~s~~~~g~~~~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~-~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 213 LYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKS-EGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp HHHHSCCSSSCCSEEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEE-TTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHhcCCCcEEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEE-CCeEEECCEEEECCCCCcc
Confidence 11111 1 12267999999999999999999999999999999999999999888875 7788999999999998752
Q ss_pred HhhccCCCCCChHHHHHHHhhccCCceEEEEEeeecCcCCCC-CCcceeeecchhhhhccCCCceEEeccCCCCCCCCCC
Q 006176 445 FGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPD-TDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPE 523 (658)
Q Consensus 445 ~~~Ll~~~~lp~~~~~~~~~~~~~~s~~~v~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~ 523 (658)
. +. .+....+.+. + ++.+....+ ...|+++++.. .+ .....+|++.++ .||+++|+
T Consensus 292 --~-~~-------------~~~~~~~~~~--i-l~~~~~~~~~~~~~~i~~~~~--~~-~~~~~~~v~~~s-~d~~~aP~ 348 (433)
T 1d5t_A 292 --R-VR-------------KAGQVIRIIC--I-LSHPIKNTNDANSCQIIIPQN--QV-NRKSDIYVCMIS-YAHNVAAQ 348 (433)
T ss_dssp --G-EE-------------EEEEEEEEEE--E-ESSCCTTSTTCSSEEEEECGG--GT-TCSSCEEEEEEE-GGGTSSCT
T ss_pred --c-cc-------------ccCcceeEEE--E-EcCcccccCCCceEEEEeCcc--cc-CCCCCEEEEEEC-CCCcccCC
Confidence 1 21 0111222222 2 555432111 13455566531 11 112348898898 89999999
Q ss_pred CceEEEEEeccccchhcccChhhhHHHHHHHHHHHHHHHHHhhCCCCcCcEEEEEecChhHHHHHhcCCCCcccCCCCCC
Q 006176 524 GHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLKQSIAFREIGSPKTHRRYLARDQGTYGPMPRGT 603 (658)
Q Consensus 524 G~~~l~~~~~~~~~~w~~l~~~~~~~~ke~~~~~il~~L~~~~~P~l~~~i~~~~~~tP~~~~~~~~~~~G~yg~~p~~~ 603 (658)
|+++++++++.+..+ + + +.+...++ ++.|..+..+..... |-+.
T Consensus 349 G~~~~~~~~~~p~~~-----~-------~---~~l~~~~~-~l~~~~~~~~~~~~~----------------~~~~---- 392 (433)
T 1d5t_A 349 GKYIAIASTTVETTD-----P-------E---KEVEPALG-LLEPIDQKFVAISDL----------------YEPI---- 392 (433)
T ss_dssp TCEEEEEEEECCSSC-----H-------H---HHTHHHHT-TTCSCSEEEEEEEEE----------------EEES----
T ss_pred CCEEEEEEEecCCCC-----H-------H---HHHHHHHH-HhhhHHhheecccee----------------eeec----
Confidence 999999888875321 0 1 22334455 556655432222211 2111
Q ss_pred CCCCCCCCCCCCCCCcEEEeCCCccCCCChhHHhhhHHHHHHHHH
Q 006176 604 PKGLLGMPFNTTGINGLYCVGDSCFPGQGVIAVAFSGVMCAHRVA 648 (658)
Q Consensus 604 ~~~~~~~p~~~t~i~gLylaG~~~~pG~Gv~ga~~sG~~aA~~Il 648 (658)
....-+|+|+++++ ..+..+++++..++..-++|.
T Consensus 393 ---------~~~~~~~~~~~~~~-d~~~~~e~~~~~~~~~~~~~~ 427 (433)
T 1d5t_A 393 ---------DDGSESQVFCSCSY-DATTHFETTCNDIKDIYKRMA 427 (433)
T ss_dssp ---------CCSTTTCEEECCCC-CSCSBSHHHHHHHHHHHHHHH
T ss_pred ---------CCCCCCCEEECCCC-CccccHHHHHHHHHHHHHHHh
Confidence 01223799999987 344567999999998888875
No 17
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.95 E-value=4.5e-27 Score=261.70 Aligned_cols=423 Identities=17% Similarity=0.142 Sum_probs=220.4
Q ss_pred CCCccEEEECCChhHHHHHHHHHHc-CCeEEEEecCCCCCcceeeEe-eCCeEEccccccccCCcCCCchHHHHHHHHhc
Q 006176 155 ADDYDAIVIGSGIGGLVAATQLAVK-GARVLVLEKYVIPGGSSGYYE-RDGYTFDVGSSVMFGFSDKGNLNLITQALAAV 232 (658)
Q Consensus 155 ~~~~~~~iiG~g~~g~~~a~~l~~~-g~~v~~~e~~~~~gg~~~t~~-~~g~~~d~G~~~~~g~~~~~~~~~~~~ll~~l 232 (658)
+..+||+|||||++||+||++|+++ |++|+|||+++++||+++|+. .+|+.+|.|+|+++. ....+.++++++
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~~~-----~~~~v~~l~~e~ 82 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFS-----HYKYFDDCLDEA 82 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSCEEESSCCCCCC-----CBHHHHHHHHHH
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCEEEEeCceEecC-----CCHHHHHHHHHh
Confidence 4568999999999999999999985 999999999999999999864 689999999999975 334577888877
Q ss_pred CCce-eEeeCCCeEEEEcCCCcEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHhhhhh
Q 006176 233 GCEM-EVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQF 311 (658)
Q Consensus 233 G~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (658)
+... +.........+ +.+|..+..+-... + ...+ .......... ..........
T Consensus 83 ~~~~~~~~~~~~~~~i-~~~g~~~~~p~~~~-----~-~~~~--~~~~~~~~~~---~~~~~~~~~~------------- 137 (513)
T 4gde_A 83 LPKEDDWYTHQRISYV-RCQGQWVPYPFQNN-----I-SMLP--KEEQVKCIDG---MIDAALEARV------------- 137 (513)
T ss_dssp SCSGGGEEEEECCEEE-EETTEEEESSGGGG-----G-GGSC--HHHHHHHHHH---HHHHHHHHHT-------------
T ss_pred CCccceeEEecCceEE-EECCeEeecchhhh-----h-hhcc--hhhHHHHHHH---HHHHHHhhhc-------------
Confidence 6532 22222111222 22454444331100 0 0000 0000000000 0000000000
Q ss_pred hcChhhhhhHhhcccccHHHHHHHhcCCHHHHHHHhhhhhhhccCCCCCchHH-----------HHH-HHHhHhhc----
Q 006176 312 FKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMI-----------NAS-MVLCDRHF---- 375 (658)
Q Consensus 312 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~-----------~~~-~~~~~~~~---- 375 (658)
......++.+++.+.+.......++..+..-..+..+.+.++. ... ........
T Consensus 138 ----------~~~~~~s~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (513)
T 4gde_A 138 ----------ANTKPKTFDEWIVRMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNW 207 (513)
T ss_dssp ----------CCSCCCSHHHHHHHHHHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSC
T ss_pred ----------ccccccCHHHHHHHhhhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhccccccc
Confidence 0001223333333332222222222221111111222111110 000 00000000
Q ss_pred ----CCccccCCChHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHHHhhccCC
Q 006176 376 ----GGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKG 451 (658)
Q Consensus 376 ----~g~~~p~gG~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~~Ll~~ 451 (658)
...+.++||++.++++|++.+++.|++|+++++|++|..++++ |++.+|+++.||+||+|++...+. .++.+
T Consensus 208 ~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~---v~~~~G~~~~ad~vI~t~P~~~l~-~~l~~ 283 (513)
T 4gde_A 208 GPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT---VTLQDGTTIGYKKLVSTMAVDFLA-EAMND 283 (513)
T ss_dssp BTTBEEEEESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE---EEETTSCEEEEEEEEECSCHHHHH-HHTTC
T ss_pred ccccceeecccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEccCCE---EEEcCCCEEECCEEEECCCHHHHH-HhcCc
Confidence 1123458999999999999999999999999999999988875 458899999999999999977654 55543
Q ss_pred CCCChHHHHHHHhhccCCceEEEEEeeecCcCCCCCCcceeeecchhhhhccCCCc-------------------eEEec
Q 006176 452 EQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGS-------------------IFLSI 512 (658)
Q Consensus 452 ~~lp~~~~~~~~~~~~~~s~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~ 512 (658)
.........+. ..+..++.++++..........+++++.+. +-++.. +.+.+
T Consensus 284 ----~~~~~~~~~l~-y~~~~~v~l~~~~~~~~~~~~~~~~y~~~~----~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~ 354 (513)
T 4gde_A 284 ----QELVGLTKQLF-YSSTHVIGVGVRGSRPERIGDKCWLYFPED----NCPFYRATIFSNYSPYNQPEASAALPTMQL 354 (513)
T ss_dssp ----HHHHHHHTTCC-EEEEEEEEEEEESSCCTTTTTCCEEECCST----TCSCSEEECGGGTCGGGSCCTTCCEECCEE
T ss_pred ----hhhHhhhhccc-CCceEEEEEEEeccccccccccceeeccCC----CCceeEEEecCCCCcccCCCCCceEEEEEe
Confidence 22222333333 335677888888765333233344444321 011111 11112
Q ss_pred cCCCCCCCCCCCceEEEEEeccccchhcccChhhhHHHHHHHHHHHHHHHHHhhCC-CCcCcEEEEEecChhHHHHHhcC
Q 006176 513 PTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFP-GLKQSIAFREIGSPKTHRRYLAR 591 (658)
Q Consensus 513 ~s~~d~~~ap~G~~~l~~~~~~~~~~w~~l~~~~~~~~ke~~~~~il~~L~~~~~P-~l~~~i~~~~~~tP~~~~~~~~~ 591 (658)
.+...+...+.+...++.+.....+ .+.++..+|++.+.+++.|. ++.+ .-.+.++..++. .+
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~de~l~~~~~~~L~-~~~~i~~~~~i~~~~v~---------r~ 418 (513)
T 4gde_A 355 ADGSRPQSTEAKEGPYWSIMLEVSE------SSMKPVNQETILADCIQGLV-NTEMLKPTDEIVSTYHR---------RF 418 (513)
T ss_dssp TTSCCCSCCSEECCCEEEEEEEEEE------BTTBCCCTTTHHHHHHHHHH-HTTSSCTTCEEEEEEEE---------EE
T ss_pred ccCCCcccccCCcceEEEEEecccc------hhccCCCHHHHHHHHHHHHH-HhcCCCCccceEEEEEE---------EC
Confidence 2223333333333333332221111 11122335788899999998 6543 223444443331 01
Q ss_pred CCCcccCCCCCCCCCCCC-CCCCCCCCCcEEEeCCC---ccCCCChhHHhhhHHHHHHHHHH
Q 006176 592 DQGTYGPMPRGTPKGLLG-MPFNTTGINGLYCVGDS---CFPGQGVIAVAFSGVMCAHRVAA 649 (658)
Q Consensus 592 ~~G~yg~~p~~~~~~~~~-~p~~~t~i~gLylaG~~---~~pG~Gv~ga~~sG~~aA~~Il~ 649 (658)
+.+ |-....+....+.. ++.-.. +|||++|-. -+....|..|+++|..||+.|+.
T Consensus 419 ~~a-yP~y~~~~~~~~~~~~~~l~~--~~l~~~GR~g~~~Y~~~n~D~a~~~g~~aa~~I~~ 477 (513)
T 4gde_A 419 DHG-YPTPTLEREGTLTQILPKLQD--KDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVN 477 (513)
T ss_dssp EEE-EECCBTTHHHHHHHHHHHHHH--TTEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred CCe-ecccCHhHHHHHHHHHHHHhh--cCcEEecCCcccCcCCCCHHHHHHHHHHHHHHHHc
Confidence 111 10000000000000 000011 599999943 22223689999999999999986
No 18
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.94 E-value=2e-24 Score=234.96 Aligned_cols=411 Identities=16% Similarity=0.146 Sum_probs=235.4
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCcceeeEeeC---CeEEccccccccCCcCCCchHHHHHHHHhcCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERD---GYTFDVGSSVMFGFSDKGNLNLITQALAAVGC 234 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~---g~~~d~G~~~~~g~~~~~~~~~~~~ll~~lG~ 234 (658)
+||+|||||++||+||+.|+++|++|+|+|+++++||++.+.... |..++.|++++.... ...+.++++++|+
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~cipg~~~~~g~~~~~~~~----~~~~~~~~~~~g~ 77 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLHRKH----HPRLAAELDRYGI 77 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSSTTCEEESSCCCBCTTT----CHHHHHHHHHHTC
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCCCCceEecCCeeeCCCC----cHHHHHHHHHhCC
Confidence 799999999999999999999999999999999999999988766 999999998886421 3456677888998
Q ss_pred ceeEeeCCCeEEEEcCCCcEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHhhhhhhcC
Q 006176 235 EMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKR 314 (658)
Q Consensus 235 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (658)
+...........+...++... .. ++........+.....+.......+. . ..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~---~~-----------~~~~~~~~~~~~~~~~~l~~~~~~~~--~-~~----------- 129 (431)
T 3k7m_X 78 PTAAASEFTSFRHRLGPTAVD---QA-----------FPIPGSEAVAVEAATYTLLRDAHRID--L-EK----------- 129 (431)
T ss_dssp CEEECCCCCEECCBSCTTCCS---SS-----------SCCCGGGHHHHHHHHHHHHHHHTTCC--T-TT-----------
T ss_pred eeeecCCCCcEEEEecCCeec---CC-----------CCCCHHHHHHHHHHHHHHHHHHHhcC--C-CC-----------
Confidence 754433222211101122110 00 00000000111111111111111000 0 00
Q ss_pred hhhhhhHhhcccccHHHHHHHhcCCHHHHHHHhhhhhhhccCCCCCchHHHHHHHHhHh-------hcCCccccCCChHH
Q 006176 315 PLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDR-------HFGGINYPVGGVGG 387 (658)
Q Consensus 315 ~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~-------~~~g~~~p~gG~~~ 387 (658)
+........+. .+..+++.+...++....++........+....+.+.......+... .......+.+|+..
T Consensus 130 ~~~~~~~~~~d-~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 208 (431)
T 3k7m_X 130 GLENQDLEDLD-IPLNEYVDKLDLPPVSRQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLDEVFSNGSAD 208 (431)
T ss_dssp CTTSSSCGGGC-SBHHHHHHHHTCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCEEETTCTHH
T ss_pred CccCcchhhhc-CCHHHHHHhcCCCHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecchhhhcCCcHHH
Confidence 00000111223 56777887777777766665544433334455545543322111100 11111156889888
Q ss_pred HHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHHHhhccCCCCCChHHHHHHHhhcc
Q 006176 388 IAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVK 467 (658)
Q Consensus 388 l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~~Ll~~~~lp~~~~~~~~~~~~ 467 (658)
+.+.+.+ +.| +|++|++|++|..++++++ |++.+|+++.||+||+|+|+..+ ..+.-.+.+|....+.......
T Consensus 209 l~~~~~~---~~g-~i~~~~~V~~i~~~~~~v~-v~~~~g~~~~ad~vi~a~~~~~l-~~i~~~p~l~~~~~~~~~~~~~ 282 (431)
T 3k7m_X 209 LVDAMSQ---EIP-EIRLQTVVTGIDQSGDVVN-VTVKDGHAFQAHSVIVATPMNTW-RRIVFTPALPERRRSVIEEGHG 282 (431)
T ss_dssp HHHHHHT---TCS-CEESSCCEEEEECSSSSEE-EEETTSCCEEEEEEEECSCGGGG-GGSEEESCCCHHHHHHHHHCCC
T ss_pred HHHHHHh---hCC-ceEeCCEEEEEEEcCCeEE-EEECCCCEEEeCEEEEecCcchH-hheeeCCCCCHHHHHHHHhCCC
Confidence 8877754 346 9999999999998887765 88889988999999999998764 4453345788776666655544
Q ss_pred CCceEEEEEeeecCcCCCCCCcceeeecchhhhhccCCCceEEeccCCCCCCCCCCCceEEEEEeccccchhcccChhhh
Q 006176 468 APSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDY 547 (658)
Q Consensus 468 ~~s~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G~~~l~~~~~~~~~~w~~l~~~~~ 547 (658)
. ...++++.++.++ ++ ++..++ .+...++.+.+ ..++..++..+..... +.. .+
T Consensus 283 ~-~~~kv~~~~~~~~--~~-----i~~~~d-----~~~~~~~~~~~-------~~~~~~~l~~~~~g~~--~~~---~~- 336 (431)
T 3k7m_X 283 G-QGLKILIHVRGAE--AG-----IECVGD-----GIFPTLYDYCE-------VSESERLLVAFTDSGS--FDP---TD- 336 (431)
T ss_dssp C-CEEEEEEEEESCC--TT-----EEEEBS-----SSSSEEEEEEE-------CSSSEEEEEEEEETTT--CCT---TC-
T ss_pred c-ceEEEEEEECCCC--cC-----ceEcCC-----CCEEEEEeCcC-------CCCCCeEEEEEecccc--CCC---CC-
Confidence 4 3478999998765 22 221111 12222332221 1134445544443322 211 11
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCcCcEEEEEecChhHHHHHhcCCCCcccCCCCCCCCCCCCCCCCCCCCCcEEEeCCCc
Q 006176 548 DAKKELVADEIINRLENKLFPGLKQSIAFREIGSPKTHRRYLARDQGTYGPMPRGTPKGLLGMPFNTTGINGLYCVGDSC 627 (658)
Q Consensus 548 ~~~ke~~~~~il~~L~~~~~P~l~~~i~~~~~~tP~~~~~~~~~~~G~yg~~p~~~~~~~~~~p~~~t~i~gLylaG~~~ 627 (658)
+ +.+.+.|+ +++|++. ++.... ..|.. ..+..|+|...+.+.... .++..+.|+++|||||..|
T Consensus 337 ----~---~~~~~~l~-~~~~~~~--~~~~~~---~~W~~-d~~~~G~~~~~~~g~~~~--~~~~l~~p~g~~~fAGe~t 400 (431)
T 3k7m_X 337 ----I---GAVKDAVL-YYLPEVE--VLGIDY---HDWIA-DPLFEGPWVAPRVGQFSR--VHKELGEPAGRIHFVGSDV 400 (431)
T ss_dssp ----H---HHHHHHHH-HHCTTCE--EEEEEC---CCTTT-CTTTSSSSCCCCTTTTTT--SSGGGGSCBTTEEECSGGG
T ss_pred ----H---HHHHHHHH-HhcCCCC--ccEeEe---cccCC-CCCCCCCCCCcCCCCCcc--cHHHHhCCCCcEEEEehhh
Confidence 1 23556677 8888764 221111 12221 122356776544332111 1344456789999999766
Q ss_pred cC--CCChhHHhhhHHHHHHHHHH
Q 006176 628 FP--GQGVIAVAFSGVMCAHRVAA 649 (658)
Q Consensus 628 ~p--G~Gv~ga~~sG~~aA~~Il~ 649 (658)
.+ .+.|+||+.||++||++|+.
T Consensus 401 ~~~~~g~~~GA~~sg~raa~~i~~ 424 (431)
T 3k7m_X 401 SLEFPGYIEGALETAECAVNAILH 424 (431)
T ss_dssp CSSSTTSHHHHHHHHHHHHHHHHH
T ss_pred hccCCeEehHHHHHHHHHHHHHHh
Confidence 43 24699999999999999985
No 19
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.94 E-value=1.5e-26 Score=257.67 Aligned_cols=281 Identities=16% Similarity=0.120 Sum_probs=158.1
Q ss_pred CCccEEEECCChhHHHHHHHHHHcC-CeEEEEecCCCCCcceeeEee-CCeEEccccccccCCcCCCchHHHHHHHHhcC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKG-ARVLVLEKYVIPGGSSGYYER-DGYTFDVGSSVMFGFSDKGNLNLITQALAAVG 233 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g-~~v~~~e~~~~~gg~~~t~~~-~g~~~d~G~~~~~g~~~~~~~~~~~~ll~~lG 233 (658)
..+||+|||||++||+||++|+++| ++|+|||+++++||++.|... +|+.+|.|++++.+... +.+.+++.++|
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G~~~D~G~~~~~~~~~----~~~~~~~~~lg 82 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGRKYDIGASWHHDTLT----NPLFLEEAQLS 82 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGGCEEESSCCEECCTTT----CHHHHHHHHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCCcEEecCCeEEecCCC----ChHHHHHHHhC
Confidence 3579999999999999999999999 999999999999999999887 89999999999875322 22334444555
Q ss_pred CceeEeeCCCeEEEEcCCCcEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHhhhhhhc
Q 006176 234 CEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFK 313 (658)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (658)
+.... ..+.+.++..+....+.... .......+..+.....+....... ...
T Consensus 83 ~~~~~------~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~---~~~------------ 134 (516)
T 1rsg_A 83 LNDGR------TRFVFDDDNFIYIDEERGRV-------DHDKELLLEIVDNEMSKFAELEFH---QHL------------ 134 (516)
T ss_dssp HHHCC------CCEECCCCCCEEEETTTEEC-------TTCTTTCHHHHHHHHHHHHHHHC-------------------
T ss_pred CCCcc------eeEEECCCCEEEEcCCCccc-------cccHHHHHHHHHHHHHHHHHHHhh---hcc------------
Confidence 32100 00112222222221110000 000000111111111111110000 000
Q ss_pred ChhhhhhHhhcccccHHHHHHHhcC-------CH---HHHHHHhhhhhhhccCCCCCchHHHHHHHHhHhhcCCccccCC
Q 006176 314 RPLECLTLAYYLPQNAGNIARKYIK-------DP---QLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVG 383 (658)
Q Consensus 314 ~~~~~~~~~~~~~~s~~~~~~~~~~-------~~---~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~p~g 383 (658)
.....++.+++.+++. +. .+..++..... ..+......++... .. ...+...++.|
T Consensus 135 ---------~~~d~s~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~-~~g~~~~~~s~~~~---~~-~~~~~~~~~~g 200 (516)
T 1rsg_A 135 ---------GVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLCRYLEL-WHGLDWKLLSAKDT---YF-GHQGRNAFALN 200 (516)
T ss_dssp ------------CCBHHHHHHHHHHHHGGGSCHHHHHHHHHHHGGGHH-HHTBCTTTSBHHHH---CC-CCSSCCEEESC
T ss_pred ---------CCCCCCHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHH-HhCCChHHCChHHH---Hh-hccCcchhhhC
Confidence 0001122222222111 00 11122221111 11233334443321 11 12223345677
Q ss_pred ChHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHHHhh----------ccCCCC
Q 006176 384 GVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGK----------LLKGEQ 453 (658)
Q Consensus 384 G~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~~----------Ll~~~~ 453 (658)
++.++++|++.+.+ ++|++|++|++|..+++..+.|++.+|+++.||+||+|+++..+... +.-.+.
T Consensus 201 -~~~l~~~l~~~l~~--~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~ 277 (516)
T 1rsg_A 201 -YDSVVQRIAQSFPQ--NWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPP 277 (516)
T ss_dssp -HHHHHHHHHTTSCG--GGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESC
T ss_pred -HHHHHHHHHHhCCC--CEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCC
Confidence 99999998877743 68999999999998643334588999988999999999998765321 111235
Q ss_pred CChHHHHHHHhhccCCceEEEEEeeecCcCCCC
Q 006176 454 LPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPD 486 (658)
Q Consensus 454 lp~~~~~~~~~~~~~~s~~~v~l~~~~~~~~~~ 486 (658)
+|..+.+.+..+.++ +..+|++.+++++|+.+
T Consensus 278 Lp~~~~~ai~~~~~~-~~~Kv~l~f~~~fW~~~ 309 (516)
T 1rsg_A 278 LKPVIQDAFDKIHFG-ALGKVIFEFEECCWSNE 309 (516)
T ss_dssp CCHHHHHHTTSSCCC-CCEEEEEEESSCCSCCS
T ss_pred CCHHHHHHHHhCCCC-cceEEEEEeCCCCCCCC
Confidence 888877776666654 46799999999998765
No 20
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.93 E-value=5e-24 Score=246.66 Aligned_cols=244 Identities=15% Similarity=0.142 Sum_probs=151.4
Q ss_pred CCccccCCChHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECC------CcEEEcCEEEECCChhHHHhhcc
Q 006176 376 GGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSD------GREFYAKTIISNATRWDTFGKLL 449 (658)
Q Consensus 376 ~g~~~p~gG~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~------G~~i~ad~VV~a~g~~~~~~~Ll 449 (658)
+.++.+.||++.|+++|++. .+|++|++|++|..+++++. |++.+ |+++.||+||+|+++..+ .+++
T Consensus 562 g~~~~~~gG~~~L~~aLa~~-----l~I~Lnt~V~~I~~~~~gV~-V~~~~~~~~~~g~~i~AD~VIvTvPl~vL-k~l~ 634 (852)
T 2xag_A 562 GSHLTVRNGYSCVPVALAEG-----LDIKLNTAVRQVRYTASGCE-VIAVNTRSTSQTFIYKCDAVLCTLPLGVL-KQQP 634 (852)
T ss_dssp SCCEEETTCTTHHHHHHTTT-----CCEECSEEEEEEEEETTEEE-EEEEESSSTTCEEEEEESEEEECCCHHHH-HCSS
T ss_pred CceEEecCcHHHHHHHHHhC-----CCEEeCCeEEEEEEcCCcEE-EEEeecccCCCCeEEECCEEEECCCHHHH-Hhhh
Confidence 44567899999999998764 47999999999999988765 76654 567999999999998764 3421
Q ss_pred ----CCCCCChHHHHHHHhhccCCceEEEEEeeecCcCCCCCCcceeeecchhhhhccCCCceEEeccCCCCCCCCCCCc
Q 006176 450 ----KGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGH 525 (658)
Q Consensus 450 ----~~~~lp~~~~~~~~~~~~~~s~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G~ 525 (658)
-.+.||..+.+.+..+.++ +..+|+|.|++++|+.+......+.... ...+.+++.+++. +.
T Consensus 635 ~~I~F~P~LP~~k~~AI~~l~~g-~v~KV~L~F~~~fW~~~~~~fG~l~~~~-----~~~~~l~~~~~~~--------~~ 700 (852)
T 2xag_A 635 PAVQFVPPLPEWKTSAVQRMGFG-NLNKVVLCFDRVFWDPSVNLFGHVGSTT-----ASRGELFLFWNLY--------KA 700 (852)
T ss_dssp CSSEEESCCCHHHHHHHHHSEEC-CCEEEEEECSSCCSCTTCCEEEECCSSS-----TTTTTTCEEEECS--------SS
T ss_pred cccccCCCCCHHHHHHHHcCCcc-ceEEEEEEcCCcccCCCCCeeeeecccc-----CCCCceEEEecCC--------CC
Confidence 1246898877777777655 4679999999999875433222221111 0111112222221 22
Q ss_pred eEEEEEeccc-cchhcccChhhhHHHHHHHHHHHHHHHHHhhCCCCc-CcEEEEEecChhHHHHHhcCCCCcccCCCCCC
Q 006176 526 HILHIFTICS-IEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLK-QSIAFREIGSPKTHRRYLARDQGTYGPMPRGT 603 (658)
Q Consensus 526 ~~l~~~~~~~-~~~w~~l~~~~~~~~ke~~~~~il~~L~~~~~P~l~-~~i~~~~~~tP~~~~~~~~~~~G~yg~~p~~~ 603 (658)
.++..++... ...|..+ .++++.+.+++.|. ++++.-. ..+....+ ..|.+ ..+..|+|...+.+.
T Consensus 701 pvLl~~v~G~~a~~l~~l-------sdeel~~~~l~~L~-~ifG~~~~~~P~~~~v---trW~~-dp~s~GsYs~~~pG~ 768 (852)
T 2xag_A 701 PILLALVAGEAAGIMENI-------SDDVIVGRCLAILK-GIFGSSAVPQPKETVV---SRWRA-DPWARGSYSYVAAGS 768 (852)
T ss_dssp SEEEEEECHHHHHHGGGS-------CHHHHHHHHHHHHH-HHHCTTTCCCCSEEEE---CCTTT-CTTTSSSCEECBTTC
T ss_pred CEEEEEecCcCHHHHhcC-------CHHHHHHHHHHHHH-HHhCccccCCceEEEE---EecCC-CCCcCccccccCCCc
Confidence 3555555432 2233333 35788889999998 7775422 12222211 11211 122356665332221
Q ss_pred CC---CCCC--------CCCCCCCCCcEEEeCCCccC--CCChhHHhhhHHHHHHHHHHHhc
Q 006176 604 PK---GLLG--------MPFNTTGINGLYCVGDSCFP--GQGVIAVAFSGVMCAHRVAADIG 652 (658)
Q Consensus 604 ~~---~~~~--------~p~~~t~i~gLylaG~~~~p--G~Gv~ga~~sG~~aA~~Il~~lg 652 (658)
.. ..+. +|...++.++|||||++|.. .+.|+||+.||++||++|++.++
T Consensus 769 ~~~~~~~L~~P~~~~~~~p~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~l~ 830 (852)
T 2xag_A 769 SGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFL 830 (852)
T ss_dssp CTTHHHHTTSCBCCCCSSTTCCCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHhCccccccccccccCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHHhh
Confidence 10 0111 12335677899999999864 24799999999999999999884
No 21
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.93 E-value=9.1e-24 Score=241.38 Aligned_cols=244 Identities=15% Similarity=0.142 Sum_probs=150.7
Q ss_pred CCccccCCChHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECC------CcEEEcCEEEECCChhHHHhhcc
Q 006176 376 GGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSD------GREFYAKTIISNATRWDTFGKLL 449 (658)
Q Consensus 376 ~g~~~p~gG~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~------G~~i~ad~VV~a~g~~~~~~~Ll 449 (658)
+..+.+.||++.|+++|++ +.+|++|++|++|..+++.+. |++.+ |+++.||+||+|+++..+ .++.
T Consensus 391 g~~~~~~gG~~~l~~~La~-----~l~I~l~~~V~~I~~~~~~v~-V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL-~~l~ 463 (662)
T 2z3y_A 391 GSHLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYTASGCE-VIAVNTRSTSQTFIYKCDAVLCTLPLGVL-KQQP 463 (662)
T ss_dssp SCCEEETTCTTHHHHHHTT-----TCEEETTEEEEEEEEETTEEE-EEEEESSCTTCEEEEEESEEEECCCHHHH-HCSS
T ss_pred CceeeecCcHHHHHHHHHh-----cCceecCCeEEEEEECCCcEE-EEEeecccCCCCeEEEeCEEEECCCHHHH-hccc
Confidence 4456789999999998876 458999999999999988765 76655 567999999999997664 3321
Q ss_pred ----CCCCCChHHHHHHHhhccCCceEEEEEeeecCcCCCCCCcceeeecchhhhhccCCCceEEeccCCCCCCCCCCCc
Q 006176 450 ----KGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGH 525 (658)
Q Consensus 450 ----~~~~lp~~~~~~~~~~~~~~s~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G~ 525 (658)
-.+.||..+.+.+..+.++ +..+|++.+++++|+.+......+.... ...+.+++.+++. +.
T Consensus 464 ~~i~f~P~LP~~k~~Ai~~l~~g-~~~KV~l~f~~~fW~~~~~~~G~l~~~~-----~~~~~~~~~~~~~--------~~ 529 (662)
T 2z3y_A 464 PAVQFVPPLPEWKTSAVQRMGFG-NLNKVVLCFDRVFWDPSVNLFGHVGSTT-----ASRGELFLFWNLY--------KA 529 (662)
T ss_dssp CSSEEESCCCHHHHHHHHHSEEC-CCEEEEEECSSCCSCTTCSEEEECCSSS-----TTTTEEEEEECCS--------SS
T ss_pred CceEEcCCCCHHHHHHHHhCCcc-ceeEEEEEcCcccccCCCCceeeecCCC-----CCCCceeEEEeCC--------CC
Confidence 1246898877777777665 4579999999999876433222221110 1112233333321 22
Q ss_pred eEEEEEeccc-cchhcccChhhhHHHHHHHHHHHHHHHHHhhCCCCc-CcEEEEEecChhHHHHHhcCCCCcccCCCCCC
Q 006176 526 HILHIFTICS-IEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLK-QSIAFREIGSPKTHRRYLARDQGTYGPMPRGT 603 (658)
Q Consensus 526 ~~l~~~~~~~-~~~w~~l~~~~~~~~ke~~~~~il~~L~~~~~P~l~-~~i~~~~~~tP~~~~~~~~~~~G~yg~~p~~~ 603 (658)
.++..++... ...|..+ .++++.+.+++.|. ++++.-. ..+....+ ..|.+ .....|+|...+.+.
T Consensus 530 ~vL~~~~~G~~a~~~~~l-------sdee~~~~~l~~L~-~~~g~~~~~~p~~~~v---~~W~~-dp~~~Gsys~~~pg~ 597 (662)
T 2z3y_A 530 PILLALVAGEAAGIMENI-------SDDVIVGRCLAILK-GIFGSSAVPQPKETVV---SRWRA-DPWARGSYSYVAAGS 597 (662)
T ss_dssp SEEEEEECTHHHHHHTTS-------CHHHHHHHHHHHHH-HHHCTTSSCCCSEEEE---CCTTT-CTTTSSSCEECBTTC
T ss_pred CEEEEEeccHhHHHHHhC-------CHHHHHHHHHHHHH-HHhCCcccCCCceeEE---EEECC-CCCCCcccccCCCCC
Confidence 3555555432 2233333 35788889999998 7775421 12222211 11211 122356665432221
Q ss_pred CC---CCCC--------CCCCCCCCCcEEEeCCCccC--CCChhHHhhhHHHHHHHHHHHhc
Q 006176 604 PK---GLLG--------MPFNTTGINGLYCVGDSCFP--GQGVIAVAFSGVMCAHRVAADIG 652 (658)
Q Consensus 604 ~~---~~~~--------~p~~~t~i~gLylaG~~~~p--G~Gv~ga~~sG~~aA~~Il~~lg 652 (658)
.. ..+. +|...++.++|||||++|.+ .+.|+||+.||++||++|++.++
T Consensus 598 ~~~~~~~l~~p~~~~~~~~~~~~~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 598 SGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp CTHHHHHHHCCBCC---------CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHT
T ss_pred chhhHHHHhCcCccccccccccCCCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHHcc
Confidence 10 0011 12234567899999999865 25799999999999999999875
No 22
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.92 E-value=1.7e-23 Score=227.10 Aligned_cols=411 Identities=13% Similarity=0.111 Sum_probs=226.4
Q ss_pred CCccEEEECCChhHHHHHHHHHHcC-CeEEEEecCCCCCcceeeEeeCCeEEccccccccCCcCCCchHHHHHHHHhcCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKG-ARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGC 234 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g-~~v~~~e~~~~~gg~~~t~~~~g~~~d~G~~~~~g~~~~~~~~~~~~ll~~lG~ 234 (658)
..+||+|||||++||+||++|+++| ++|+|+|+.+++||++.|+..+|+.+|.|++++.. ....+.++++++|+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G~~~d~G~~~~~~-----~~~~~~~l~~~~g~ 79 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHGRRYEMGAIMGVP-----SYDTIQEIMDRTGD 79 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETTEECCSSCCCBCT-----TCHHHHHHHHHHCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCCcccccCceeecC-----CcHHHHHHHHHhCC
Confidence 4689999999999999999999999 99999999999999999999999999999998753 33567889999998
Q ss_pred ceeEeeCCCeEEEEcCCCcEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHhhhhhhcC
Q 006176 235 EMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKR 314 (658)
Q Consensus 235 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (658)
+... ......+.+.+|.......+.... ..+...+. +....+.. ....+.. ...+..
T Consensus 80 ~~~~--~~~~~~~~~~~g~~~~~~~~~~~~------------~~~~~~~~---~l~~~~~~-~~~~~~~-----~~~~~~ 136 (424)
T 2b9w_A 80 KVDG--PKLRREFLHEDGEIYVPEKDPVRG------------PQVMAAVQ---KLGQLLAT-KYQGYDA-----NGHYNK 136 (424)
T ss_dssp CCCS--CCCCEEEECTTSCEECGGGCTTHH------------HHHHHHHH---HHHHHHHT-TTTTTTS-----SSSSSC
T ss_pred cccc--ccccceeEcCCCCEeccccCcccc------------hhHHHHHH---HHHHHHhh-hhhhccc-----ccchhh
Confidence 7542 222234455666543211111110 00000000 11000000 0000000 000000
Q ss_pred hhhhhhHhhcccccHHHHHHHhcCCHHHHHHHhhhhhhhccCCCCCchHHHHHHHH-----hHhhcCCccccCCChHHHH
Q 006176 315 PLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVL-----CDRHFGGINYPVGGVGGIA 389 (658)
Q Consensus 315 ~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~-----~~~~~~g~~~p~gG~~~l~ 389 (658)
.......++.+++++...+.....++....... ...+...|+.+..... .....++.+.+.+|+++++
T Consensus 137 ------~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~ 209 (424)
T 2b9w_A 137 ------VHEDLMLPFDEFLALNGCEAARDLWINPFTAFG-YGHFDNVPAAYVLKYLDFVTMMSFAKGDLWTWADGTQAMF 209 (424)
T ss_dssp ------CCGGGGSBHHHHHHHTTCGGGHHHHTTTTCCCC-CCCTTTSBHHHHHHHSCHHHHHHHHHTCCBCCTTCHHHHH
T ss_pred ------hhhhhccCHHHHHHhhCcHHHHHHHHHHHHhhc-cCChHhcCHHHHHHhhhHhhhhcccCCceEEeCChHHHHH
Confidence 011234677888887765543333333222211 1244556654432111 1112245667899999999
Q ss_pred HHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHHHhhccCCCCCChHHHHHHHhhccCC
Q 006176 390 KSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAP 469 (658)
Q Consensus 390 ~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~~Ll~~~~lp~~~~~~~~~~~~~~ 469 (658)
++|.+.+ +.+|+++++|++|..+++++. |++.+|+ +.||+||+|++++.++ .+++. .|.+ ++....+.+.+
T Consensus 210 ~~l~~~l---~~~v~~~~~V~~i~~~~~~v~-v~~~~g~-~~ad~Vv~a~~~~~~~-~~l~~--~~~~-~~~~~~~~~~~ 280 (424)
T 2b9w_A 210 EHLNATL---EHPAERNVDITRITREDGKVH-IHTTDWD-RESDVLVLTVPLEKFL-DYSDA--DDDE-REYFSKIIHQQ 280 (424)
T ss_dssp HHHHHHS---SSCCBCSCCEEEEECCTTCEE-EEESSCE-EEESEEEECSCHHHHT-TSBCC--CHHH-HHHHTTCEEEE
T ss_pred HHHHHhh---cceEEcCCEEEEEEEECCEEE-EEECCCe-EEcCEEEECCCHHHHh-hccCC--CHHH-HHHHhcCCcce
Confidence 9998776 468999999999998888776 8888885 9999999999998764 45542 3433 23334443322
Q ss_pred ceEEEEEeeecCcCCCCCCcceeeecchhhhhccCCCceEEeccCCCCCCCCCCCceEEEEEeccccchhcccChhhhHH
Q 006176 470 SFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQKDYDA 549 (658)
Q Consensus 470 s~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G~~~l~~~~~~~~~~w~~l~~~~~~~ 549 (658)
+.+.+.+.... +.. ..++++++... .....++... .. + ++....+..|.......|.+.
T Consensus 281 --~~~~~~~~~~~--~~~---~~~~~~~~~~~-~~g~~~~~~~--~~-~---~~~~~~l~~~~~~~~~~~~~~------- 339 (424)
T 2b9w_A 281 --YMVDACLVKEY--PTI---SGYVPDNMRPE-RLGHVMVYYH--RW-A---DDPHQIITTYLLRNHPDYADK------- 339 (424)
T ss_dssp --EEEEEEEESSC--CSS---EEECGGGGSGG-GTTSCCEEEE--CC-T---TCTTSCEEEEEECCBTTBCCC-------
T ss_pred --eEEEEEEeccC--Ccc---cccccCCCCCc-CCCcceEEee--ec-C---CCCceEEEEEeccCCCccccc-------
Confidence 23333343322 111 12333322210 0100122111 11 1 112234444444333334332
Q ss_pred HHHHHHHHHHHHHHHhhCCCCcCcEEEEE-ecChh-HHHHHhcCCCCcccCCCCCCCCCCCCCCCCCCCCCcEEEeCCCc
Q 006176 550 KKELVADEIINRLENKLFPGLKQSIAFRE-IGSPK-THRRYLARDQGTYGPMPRGTPKGLLGMPFNTTGINGLYCVGDSC 627 (658)
Q Consensus 550 ~ke~~~~~il~~L~~~~~P~l~~~i~~~~-~~tP~-~~~~~~~~~~G~yg~~p~~~~~~~~~~p~~~t~i~gLylaG~~~ 627 (658)
.++++.+.+++.|+ ++.+...+.+.... ...|. .-..+. .|.+. ++...++.+||||||+++
T Consensus 340 ~~~~~~~~v~~~l~-~l~~~~~~~~~~~~w~~~p~~~~~~~~---~G~~~------------~~~~~~~~~~l~~aG~~~ 403 (424)
T 2b9w_A 340 TQEECRQMVLDDME-TFGHPVEKIIEEQTWYYFPHVSSEDYK---AGWYE------------KVEGMQGRRNTFYAGEIM 403 (424)
T ss_dssp CHHHHHHHHHHHHH-HTTCCEEEEEEEEEEEEEEECCHHHHH---TTHHH------------HHHHTTTGGGEEECSGGG
T ss_pred ChHHHHHHHHHHHH-HcCCcccccccccceeeeeccCHHHHh---ccHHH------------HHHHHhCCCCceEecccc
Confidence 24678889999998 66554333222111 11110 000111 11111 111124457999999987
Q ss_pred cCCCChhHHhhhHHHHHHHHH
Q 006176 628 FPGQGVIAVAFSGVMCAHRVA 648 (658)
Q Consensus 628 ~pG~Gv~ga~~sG~~aA~~Il 648 (658)
..| -+++|+.||+.||+.|+
T Consensus 404 ~~g-~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 404 SFG-NFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp SCS-SHHHHHHHHHHHHHHHT
T ss_pred ccc-cHHHHHHHHHHHHHHhc
Confidence 432 36799999999999875
No 23
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.92 E-value=1.3e-23 Score=231.42 Aligned_cols=415 Identities=16% Similarity=0.150 Sum_probs=234.1
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcC-CeEEEEecCCCCCcceeeE-eeCCeEEccccccccCCcCCCchHHHHHHHHhc
Q 006176 155 ADDYDAIVIGSGIGGLVAATQLAVKG-ARVLVLEKYVIPGGSSGYY-ERDGYTFDVGSSVMFGFSDKGNLNLITQALAAV 232 (658)
Q Consensus 155 ~~~~~~~iiG~g~~g~~~a~~l~~~g-~~v~~~e~~~~~gg~~~t~-~~~g~~~d~G~~~~~g~~~~~~~~~~~~ll~~l 232 (658)
...+||+|||||++||++|++|+++| .+|+|+|+.+.+||++.++ ..+|+.+|.|++.++. ....+.++++++
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~~g~~~~~~-----~~~~~~~l~~~~ 81 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWDLGGHVIFS-----HYQYFDDVMDWA 81 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEESSCCCBCC-----SBHHHHHHHHHH
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEeeCCccccc-----ChHHHHHHHHHH
Confidence 35689999999999999999999999 7999999999999999986 6789999999999875 334567777776
Q ss_pred CCceeEeeCCCeEEEEcCCCcEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHhhhhhh
Q 006176 233 GCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFF 312 (658)
Q Consensus 233 G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (658)
..++........ .+.+|..+.++-... + ..++.. .... ... ..... ... .
T Consensus 82 ~~~~~~~~~~~~---~~~~g~~~~~P~~~~--~----~~l~~~-~~~~-~~~---~ll~~----~~~-~----------- 131 (484)
T 4dsg_A 82 VQGWNVLQRESW---VWVRGRWVPYPFQNN--I----HRLPEQ-DRKR-CLD---ELVRS----HAR-T----------- 131 (484)
T ss_dssp CSCEEEEECCCE---EEETTEEEESSGGGC--G----GGSCHH-HHHH-HHH---HHHHH----HHC-C-----------
T ss_pred hhhhhhccCceE---EEECCEEEEeCccch--h----hhCCHH-HHHH-HHH---HHHHH----Hhc-c-----------
Confidence 533322222111 123455544431100 0 011110 0000 000 00000 000 0
Q ss_pred cChhhhhhHhhcccccHHHHHHHhcCCHHHHHHHhhhhhhhccCCCCCchH-----------HHHHHHHhHh--------
Q 006176 313 KRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPM-----------INASMVLCDR-------- 373 (658)
Q Consensus 313 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~-----------~~~~~~~~~~-------- 373 (658)
......++.+++.+.+..+....++..+..-..+.++.+.++ ....+.....
T Consensus 132 ---------~~~~~~s~~e~~~~~~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~ 202 (484)
T 4dsg_A 132 ---------YTEPPNNFEESFTRQFGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWG 202 (484)
T ss_dssp ---------CSSCCSSHHHHHHHHHHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCS
T ss_pred ---------CCCCCCCHHHHHHHHhHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCC
Confidence 001133444555444332222222222211111222222221 1100000000
Q ss_pred hcCCccccC-CChHHHHHHHHHHHHHcCcEEEeC--ceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHHHhhccC
Q 006176 374 HFGGINYPV-GGVGGIAKSLAKGLADKGSEILYK--ANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLK 450 (658)
Q Consensus 374 ~~~g~~~p~-gG~~~l~~~L~~~l~~~G~~I~~~--~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~~Ll~ 450 (658)
....+.||. ||++.++++|++.+.+. +|+++ ++|++|..++++ |++.+|+++.||+||+|++++.+. +++.
T Consensus 203 ~~~~f~yp~~gG~~~l~~~la~~l~~~--~i~~~~~~~V~~I~~~~~~---v~~~~G~~~~ad~VI~a~p~~~~~-~ll~ 276 (484)
T 4dsg_A 203 PNATFRFPQRGGTGIIYQAIKEKLPSE--KLTFNSGFQAIAIDADAKT---ITFSNGEVVSYDYLISTVPFDNLL-RMTK 276 (484)
T ss_dssp TTSEEEEESSSCTHHHHHHHHHHSCGG--GEEECGGGCEEEEETTTTE---EEETTSCEEECSEEEECSCHHHHH-HHEE
T ss_pred ccceEEeecCCCHHHHHHHHHhhhhhC--eEEECCCceeEEEEecCCE---EEECCCCEEECCEEEECCCHHHHH-HHhh
Confidence 111234554 89999999999988543 89999 569999988775 456889899999999999988765 5554
Q ss_pred C--CCCChHHHHHHHhhccCCceEEEEEeeecCcCCCCCCcceeeecchhhhhccCCCceEEeccCCCCCCCCCCCceEE
Q 006176 451 G--EQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHIL 528 (658)
Q Consensus 451 ~--~~lp~~~~~~~~~~~~~~s~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G~~~l 528 (658)
. ..+|+...+....+.+. +..+++++++.+...+-...+++++++. + .++ ..+++++..+|.++|+|++++
T Consensus 277 ~~~~~~~~~~~~~l~~l~y~-s~~~v~l~~~~~~~~~~~~~~~i~vp~~-~---~~~--~ri~~~s~~~p~~ap~g~~~l 349 (484)
T 4dsg_A 277 GTGFKGYDEWPAIADKMVYS-STNVIGIGVKGTPPPHLKTACWLYFPED-T---SPF--YRATVFSNYSKYNVPEGHWSL 349 (484)
T ss_dssp CSSCTTGGGHHHHHHHCCEE-EEEEEEEEEESCCCGGGTTCCEEECCST-T---CSC--SEEECGGGTCGGGSCTTEEEE
T ss_pred ccCCCCCHHHHHHHhCCCcC-ceEEEEEEEcCCCcccCCCCeEEEEEcC-C---CeE--EEEEeecCCCcccCCCCeEEE
Confidence 2 24666666666666543 5788999998764211123456665531 1 233 235667778898999998887
Q ss_pred EEEeccccchhcccChhhhHHHHHHHHHHHHHHHHHhhCCCCc--CcEEEEEecChhHHHHHhcCCCCcccCCCCCCCCC
Q 006176 529 HIFTICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLK--QSIAFREIGSPKTHRRYLARDQGTYGPMPRGTPKG 606 (658)
Q Consensus 529 ~~~~~~~~~~w~~l~~~~~~~~ke~~~~~il~~L~~~~~P~l~--~~i~~~~~~tP~~~~~~~~~~~G~yg~~p~~~~~~ 606 (658)
++.+... ..|. . .+|++++.+++.|. ++. .+. +.+...++. .+..+|-....+....
T Consensus 350 ~~e~~~~-~~~~-~-------~d~~l~~~a~~~L~-~~~-~~~~~~~~~~~~v~----------r~~~~yP~y~~~~~~~ 408 (484)
T 4dsg_A 350 MLEVSES-KYKP-V-------NHSTLIEDCIVGCL-ASN-LLLPEDLLVSKWHY----------RIEKGYPTPFIGRNNL 408 (484)
T ss_dssp EEEEEEB-TTBC-C-------CTTSHHHHHHHHHH-HTT-SCCTTCCEEEEEEE----------EEEEEEECCBTTHHHH
T ss_pred EEEEecC-cCCc-C-------CHHHHHHHHHHHHH-HcC-CCCccceEEEEEEE----------EeCccccCCCccHHHH
Confidence 7765433 2231 2 24678899999998 653 443 223322210 0011121100000000
Q ss_pred CCCCCCCCCCCCcEEEeCCCc--cCC-CChhHHhhhHHHHHHHHH
Q 006176 607 LLGMPFNTTGINGLYCVGDSC--FPG-QGVIAVAFSGVMCAHRVA 648 (658)
Q Consensus 607 ~~~~p~~~t~i~gLylaG~~~--~pG-~Gv~ga~~sG~~aA~~Il 648 (658)
+.......... |||++|.+. ..| .+++.|+.+|..||+.|+
T Consensus 409 ~~~~~~~l~~~-~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 409 LEKAQPELMSR-CIYSRGRFGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp HHHHHHHHHHT-TEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhC-CcEeecCCcccccCCCChHHHHHHHHHHHHHHH
Confidence 00000001123 999999843 223 478999999999999997
No 24
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.90 E-value=2.2e-22 Score=211.94 Aligned_cols=232 Identities=16% Similarity=0.113 Sum_probs=146.0
Q ss_pred ccccCCChHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHHHhhccCC--CCCC
Q 006176 378 INYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKG--EQLP 455 (658)
Q Consensus 378 ~~~p~gG~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~~Ll~~--~~lp 455 (658)
.+...+|+..+.+.|.+.+ |++|+++++|++|..+++++. |++.+|+++.+|.||+|+++..+ ..|+.. +.+|
T Consensus 104 ~~~~~~g~~~l~~~l~~~~---g~~i~~~~~V~~i~~~~~~~~-v~~~~g~~~~ad~vV~A~p~~~~-~~ll~~~~~~l~ 178 (342)
T 3qj4_A 104 NFVAPQGISSIIKHYLKES---GAEVYFRHRVTQINLRDDKWE-VSKQTGSPEQFDLIVLTMPVPEI-LQLQGDITTLIS 178 (342)
T ss_dssp EEECTTCTTHHHHHHHHHH---TCEEESSCCEEEEEECSSSEE-EEESSSCCEEESEEEECSCHHHH-TTCBSTHHHHSC
T ss_pred ceecCCCHHHHHHHHHHhc---CCEEEeCCEEEEEEEcCCEEE-EEECCCCEEEcCEEEECCCHHHH-HHHhcccccccC
Confidence 4566789999999998876 899999999999998887765 88888887899999999998776 466653 2366
Q ss_pred hHHHHHHHhhccCCceEEEEEeeecCcCCCCCCcceeeecchhhhhccCCCceEEeccCCCCCCCC-CCCceEEEEEecc
Q 006176 456 KEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLA-PEGHHILHIFTIC 534 (658)
Q Consensus 456 ~~~~~~~~~~~~~~s~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~a-p~G~~~l~~~~~~ 534 (658)
+.....+..+.+. ++.++++.++++++.+ .....++++++ .+.. ++...+.. +.+. +++...+.+++..
T Consensus 179 ~~~~~~l~~~~~~-~~~~v~l~~~~~~~~~-~~~~g~~~~~~-----~~~~--~~~~~~~k-~~r~~~~~~~~~v~~~~~ 248 (342)
T 3qj4_A 179 ECQRQQLEAVSYS-SRYALGLFYEAGTKID-VPWAGQYITSN-----PCIR--FVSIDNKK-RNIESSEIGPSLVIHTTV 248 (342)
T ss_dssp HHHHHHHHTCCBC-CEEEEEEECSSCC--C-CSCSEEECSSC-----SSEE--EEEEHHHH-TTCCCC-CCCEEEEEECH
T ss_pred HHHHHHHhcCCcc-ccEEEEEEECCCCccC-CceeeEEccCC-----cceE--EEEccccC-CCCCCCCCCceEEEECCH
Confidence 6666666777655 5779999999764322 22222333221 1121 22222222 3322 2333344444432
Q ss_pred ccchhcccChhhhHHHHHHHHHHHHHHHHHhhCCCCcCcEEEEEecChhHHHHHhcCCCCc--ccCCCCCCCCCCCCCCC
Q 006176 535 SIEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLKQSIAFREIGSPKTHRRYLARDQGT--YGPMPRGTPKGLLGMPF 612 (658)
Q Consensus 535 ~~~~w~~l~~~~~~~~ke~~~~~il~~L~~~~~P~l~~~i~~~~~~tP~~~~~~~~~~~G~--yg~~p~~~~~~~~~~p~ 612 (658)
.|. .+..+..+|++++.++++|. ++++.... +++..+ ..+..+. |+. + .+|.
T Consensus 249 ---~~~---~~~~~~~~~~~~~~~~~~l~-~~~g~~~~-p~~~~v---------~rW~~a~p~~~~-~--------~~~~ 302 (342)
T 3qj4_A 249 ---PFG---VTYLEHSIEDVQELVFQQLE-NILPGLPQ-PIATKC---------QKWRHSQVTNAA-A--------NCPG 302 (342)
T ss_dssp ---HHH---HHTTTSCHHHHHHHHHHHHH-HHSCSCCC-CSEEEE---------EEETTCSBSSCC-S--------SSCS
T ss_pred ---HHH---HHhhcCCHHHHHHHHHHHHH-HhccCCCC-Cceeee---------cccccccccccc-C--------CCcc
Confidence 232 11223346899999999999 88874432 222222 1111221 111 0 1222
Q ss_pred CC--CCCCcEEEeCCCccCCCChhHHhhhHHHHHHHHHHHh
Q 006176 613 NT--TGINGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADI 651 (658)
Q Consensus 613 ~~--t~i~gLylaG~~~~pG~Gv~ga~~sG~~aA~~Il~~l 651 (658)
.. ...+||++||||+. |.||++|+.||+.||++|++.|
T Consensus 303 ~~~~~~~~~l~laGd~~~-g~~v~~ai~sg~~aa~~i~~~l 342 (342)
T 3qj4_A 303 QMTLHHKPFLACGGDGFT-QSNFDGCITSALCVLEALKNYI 342 (342)
T ss_dssp CEEEETTTEEEECSGGGS-CSSHHHHHHHHHHHHHHHTTC-
T ss_pred eeEecCCccEEEEccccC-CCCccHHHHHHHHHHHHHHhhC
Confidence 22 35689999999974 7899999999999999997653
No 25
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.90 E-value=4e-22 Score=229.47 Aligned_cols=425 Identities=16% Similarity=0.111 Sum_probs=227.4
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCcceeeEee-CCeEEccccccccCCcCCCchHHHHHHHHhcC
Q 006176 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYER-DGYTFDVGSSVMFGFSDKGNLNLITQALAAVG 233 (658)
Q Consensus 155 ~~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~-~g~~~d~G~~~~~g~~~~~~~~~~~~ll~~lG 233 (658)
...+||+|||||++||++|+.|++.|++|+|+|+.+.+||++.|... .|+.+|.|++++.+.. .+.+..+++++|
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~~~~G~~vd~Ga~~i~G~~----~np~~~l~~~lG 409 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCI----NNPVALMCEQLG 409 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEECCSTTCCEESSCCEEECCT----TCHHHHHHHHHT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeeccccCCeEeccCCeEEeCCc----cChHHHHHHHhC
Confidence 34689999999999999999999999999999999999999998764 5889999999998643 334667888899
Q ss_pred CceeEeeCCCeEEEEcCCCcEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHhhhhhhc
Q 006176 234 CEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFK 313 (658)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (658)
++........ .+...++... .. ....... ..+..+... ...... .......
T Consensus 410 l~~~~~~~~~--~l~~~~g~~~----~~-~~~~~~~-------~~~~~ll~~----~~~~~~---~~~~~~d-------- 460 (776)
T 4gut_A 410 ISMHKFGERC--DLIQEGGRIT----DP-TIDKRMD-------FHFNALLDV----VSEWRK---DKTQLQD-------- 460 (776)
T ss_dssp CCCEECCSCC--CEECTTSCBC----CH-HHHHHHH-------HHHHHHHHH----HHHHGG---GCCGGGC--------
T ss_pred Cccccccccc--ceEccCCccc----ch-hHHHHHH-------HHHHHHHHH----HHHHhh---ccccccc--------
Confidence 8754433221 1122233210 11 1100000 001111111 110000 0000000
Q ss_pred ChhhhhhHhhcccccHHHHHHHhcCC-----H-HHHHHHhhhhhhhccCCCCCchHHHHHH-HHhHhhcCCccccCCChH
Q 006176 314 RPLECLTLAYYLPQNAGNIARKYIKD-----P-QLLSFIDAECFIVSTINALQTPMINASM-VLCDRHFGGINYPVGGVG 386 (658)
Q Consensus 314 ~~~~~~~~~~~~~~s~~~~~~~~~~~-----~-~l~~~l~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~g~~~p~gG~~ 386 (658)
..+.....+....++++.... . .+...+.. ..+..+......+...... .......+....+.+|++
T Consensus 461 -----~sl~~~~~~~~~~~l~~~gv~~~~l~~~~l~~~~~~-l~~~~G~~l~~ls~~~~~~~~~~~~~~G~~~~~~~G~~ 534 (776)
T 4gut_A 461 -----VPLGEKIEEIYKAFIKESGIQFSELEGQVLQFHLSN-LEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLTPGYS 534 (776)
T ss_dssp -----CBHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHH-HHHHHTSCTTSBBTTTTTGGGGSCCCCSCEEECTTCTH
T ss_pred -----ccHHHHHHHHHHHHHHhcCCCccchhHHHHHHHHHH-HHHhcCCChHHcChhhhhhhhhHHhcCCCeEEECChHH
Confidence 000000000011111111000 0 01000000 0011111122222110000 000112234456789999
Q ss_pred HHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHHHhhc-cCCCCCChHHHHHHHhh
Q 006176 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKL-LKGEQLPKEEENFQKLY 465 (658)
Q Consensus 387 ~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~~L-l~~~~lp~~~~~~~~~~ 465 (658)
.+.++|++ |++|+++++|++|..++++++ |++.+|+++.||+||+|+++..+.... .-.+.+|..+.+.+..+
T Consensus 535 ~l~~aLa~-----gl~I~l~t~V~~I~~~~~~v~-V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l 608 (776)
T 4gut_A 535 VIIEKLAE-----GLDIQLKSPVQCIDYSGDEVQ-VTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSL 608 (776)
T ss_dssp HHHHHHHT-----TSCEESSCCEEEEECSSSSEE-EEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHE
T ss_pred HHHHHHHh-----CCcEEcCCeeEEEEEcCCEEE-EEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhC
Confidence 99888864 679999999999998888765 888999889999999999976643211 12346888777777666
Q ss_pred ccCCceEEEEEeeecCcCCCCCCcceee--ecchhhhhccCCCceEEeccCCCCCCCCCCC-ceEEEEEeccc-cchhcc
Q 006176 466 VKAPSFLSIHMGVKAEVLPPDTDCHHFV--LEDDWNRLEEPYGSIFLSIPTVLDSSLAPEG-HHILHIFTICS-IEDWEG 541 (658)
Q Consensus 466 ~~~~s~~~v~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G-~~~l~~~~~~~-~~~w~~ 541 (658)
..+ ...+|++.+++++|+.+.....++ +.... ...+.+.+.... .|+| ..++..++... ...|..
T Consensus 609 ~~g-~~~KV~l~f~~~FW~~~~~g~~~fG~l~~~~----~~~~~~~~~~d~------~p~g~~~vL~~~i~G~~a~~l~~ 677 (776)
T 4gut_A 609 GAG-IIEKIALQFPYRFWDSKVQGADFFGHVPPSA----SKRGLFAVFYDM------DPQKKHSVLMSVIAGEAVASVRT 677 (776)
T ss_dssp EEE-CCEEEEEECSSCTTHHHHTTCSEEEECCSSG----GGTTEEEEEEES------CTTSCSCEEEEEECTHHHHHHHT
T ss_pred CCe-eEEEEEEecCcccccccCCCCceEEeecCCc----CCCceEEEEecC------CCCCCceEEEEEecchhHHHHHc
Confidence 544 467999999999876421111111 11100 011112221111 2334 34565555432 233433
Q ss_pred cChhhhHHHHHHHHHHHHHHHHHhhCCCCc-CcEEEEEecChhHHHHHhcCCCCcccCCCCCCCCCCCCCCCCCCC-CCc
Q 006176 542 LAQKDYDAKKELVADEIINRLENKLFPGLK-QSIAFREIGSPKTHRRYLARDQGTYGPMPRGTPKGLLGMPFNTTG-ING 619 (658)
Q Consensus 542 l~~~~~~~~ke~~~~~il~~L~~~~~P~l~-~~i~~~~~~tP~~~~~~~~~~~G~yg~~p~~~~~~~~~~p~~~t~-i~g 619 (658)
+ .++++.+.+++.|. ++++.-. ..++...+ ..|.+ .....|+|...+.+..... .+....+ .++
T Consensus 678 l-------sdeel~~~~l~~L~-~ifg~~~~~~P~~~~v---t~W~~-dp~s~Gsys~~~~g~~~~~--~~~L~~p~~gr 743 (776)
T 4gut_A 678 L-------DDKQVLQQCMATLR-ELFKEQEVPDPTKYFV---TRWST-DPWIQMAYSFVKTGGSGEA--YDIIAEDIQGT 743 (776)
T ss_dssp S-------CHHHHHHHHHHHHH-HHTTTSCCCCCSEEEE---CCGGG-CTTTCCSEEEEBTTCCTHH--HHHHHCCBTTT
T ss_pred C-------CHHHHHHHHHHHHH-HHhCcccccCcceEEE---ecCCC-CCccCCCCCccCCCCchhH--HHHHhCcCCCc
Confidence 3 35788999999999 8886422 12222111 11222 1223566654322111000 0011123 478
Q ss_pred EEEeCCCccCC--CChhHHhhhHHHHHHHHHH
Q 006176 620 LYCVGDSCFPG--QGVIAVAFSGVMCAHRVAA 649 (658)
Q Consensus 620 LylaG~~~~pG--~Gv~ga~~sG~~aA~~Il~ 649 (658)
|||||++|.+. +.|+||+.||++||++|++
T Consensus 744 L~FAGE~Ts~~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 744 VFFAGEATNRHFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp EEECSGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred EEEEehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence 99999999752 4699999999999999974
No 26
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.89 E-value=1.7e-22 Score=227.73 Aligned_cols=261 Identities=11% Similarity=-0.020 Sum_probs=149.6
Q ss_pred CCccccCCChHHHHHHHHHHHHHcCcEEEeCceee--EEEEeCCE------EEEE-EECCCc--EEEcCEEEECCChhHH
Q 006176 376 GGINYPVGGVGGIAKSLAKGLADKGSEILYKANVT--KVILEQGK------AVGV-RLSDGR--EFYAKTIISNATRWDT 444 (658)
Q Consensus 376 ~g~~~p~gG~~~l~~~L~~~l~~~G~~I~~~~~V~--~I~~~~~~------v~gV-~~~~G~--~i~ad~VV~a~g~~~~ 444 (658)
...+.+.||+++|+++|++.+.+ |+.|+++++|+ +|..+++. .+.| ...+|+ ++.||+||+|+++..+
T Consensus 337 ~~~~~i~GG~~~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L 415 (721)
T 3ayj_A 337 NEYTLPVTENVEFIRNLFLKAQN-VGAGKLVVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQL 415 (721)
T ss_dssp CEECCSSSSTHHHHHHHHHHHHH-HTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHH
T ss_pred cceeEECCcHHHHHHHHHHhccc-CCceEeCCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECCCHHHH
Confidence 35678999999999999998754 67799999999 99876433 2336 456777 7899999999997665
Q ss_pred Hh-----hcc----------------------CCCCC-C-------hHHHHHHHhhccCCceEEEEEee-----ecCcCC
Q 006176 445 FG-----KLL----------------------KGEQL-P-------KEEENFQKLYVKAPSFLSIHMGV-----KAEVLP 484 (658)
Q Consensus 445 ~~-----~Ll----------------------~~~~l-p-------~~~~~~~~~~~~~~s~~~v~l~~-----~~~~~~ 484 (658)
.. .+- .++.+ | ..++.+++...+.. ..+|++.+ ++++|.
T Consensus 416 ~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~-s~Kv~l~~~~~~~~~~fW~ 494 (721)
T 3ayj_A 416 TPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMAR-SSKVFATVKTAALDQPWVP 494 (721)
T ss_dssp HHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEEC-EEEEEEEEEGGGGGSTTSC
T ss_pred hhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCccc-ceEEEEEEccccCCCCccc
Confidence 21 111 12224 7 66666777766554 56999999 788776
Q ss_pred CCCC-cceeeecchhhhhccCCCceEE-eccCCCCCCCCCCCceEEEE-Eecc-ccchh------cccChhhhHHHHHHH
Q 006176 485 PDTD-CHHFVLEDDWNRLEEPYGSIFL-SIPTVLDSSLAPEGHHILHI-FTIC-SIEDW------EGLAQKDYDAKKELV 554 (658)
Q Consensus 485 ~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~s~~d~~~ap~G~~~l~~-~~~~-~~~~w------~~l~~~~~~~~ke~~ 554 (658)
.+.. .....+.+ .+...+|. ..|+..| ..+++..++.+ |+.. .+..| ..+++++-....+.+
T Consensus 495 ~~~g~~i~~s~TD------~~~r~~~~~p~p~~~d--~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~ 566 (721)
T 3ayj_A 495 QWRGEPIKAVVSD------SGLAASYVVPSPIVED--GQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGM 566 (721)
T ss_dssp EETTEECCEEEET------TTTEEEEEEECSCC------CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHH
T ss_pred ccCCCCceeeecC------CCcceEEEeccCcccc--cCCCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHH
Confidence 5411 00112222 22212332 1233212 12345444433 4432 23344 222221111112445
Q ss_pred HHHHHHHHHH-hhCCCCc-----------------CcEEEEEecChhHHHHHhcCCCCcccCC-CCCCC-----CCCCCC
Q 006176 555 ADEIINRLEN-KLFPGLK-----------------QSIAFREIGSPKTHRRYLARDQGTYGPM-PRGTP-----KGLLGM 610 (658)
Q Consensus 555 ~~~il~~L~~-~~~P~l~-----------------~~i~~~~~~tP~~~~~~~~~~~G~yg~~-p~~~~-----~~~~~~ 610 (658)
.+.+++.|.+ +++|+.. +...+.|...| ..|+|... |.... ..+...
T Consensus 567 ~~~~l~~la~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~dW~~dp---------s~Gaf~~~~pgq~~~~~l~~~~~~~ 637 (721)
T 3ayj_A 567 YRTMVNRAYRYVKYAGASNAQPWWFYQLLAEARTADRFVFDWTTNK---------TAGGFKLDMTGDHHQSNLCFRYHTH 637 (721)
T ss_dssp HHHHHHHTCCEECCTTCSSCEECHHHHHHHTSCSTTCEEEEGGGST---------TSSSEECCBTTTHHHHHHHHHGGGG
T ss_pred HHHHHHHHhhhccCccccccccchhhhhhhhcccCceEEEeCCCCC---------CCCccccCCCccchhhhhhhhhhhh
Confidence 7788888861 3567654 12333333222 35555432 32200 000000
Q ss_pred CCCCCCCCcEEEeCCCc-cCCCChhHHhhhHHHHHHHHHHHhcccC
Q 006176 611 PFNTTGINGLYCVGDSC-FPGQGVIAVAFSGVMCAHRVAADIGNRI 655 (658)
Q Consensus 611 p~~~t~i~gLylaG~~~-~pG~Gv~ga~~sG~~aA~~Il~~lg~~~ 655 (658)
.....+..++||||+++ +.++.++||+.||++||..|++.++...
T Consensus 638 ~~~~~~~gri~fAGe~~S~~~GWieGAl~Sa~~Aa~~i~~~~~~~~ 683 (721)
T 3ayj_A 638 ALAASLDNRFFIASDSYSHLGGWLEGAFMSALNAVAGLIVRANRGD 683 (721)
T ss_dssp GGCTTTCCCEEECSGGGSSCTTSHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ccccCCCCCEEEeehhhccCCceehHHHHHHHHHHHHHHHHhcCCC
Confidence 01124568999999987 4455699999999999999999997654
No 27
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.87 E-value=1.4e-20 Score=203.89 Aligned_cols=331 Identities=15% Similarity=0.224 Sum_probs=198.9
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCcceeeEeeC--------------------CeEEcccccccc
Q 006176 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERD--------------------GYTFDVGSSVMF 214 (658)
Q Consensus 155 ~~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~--------------------g~~~d~G~~~~~ 214 (658)
+..+||+|||+|++|+++|+.|+++|++|+|+|+++.+||++.++... +|.+|.+++.+.
T Consensus 18 ~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l~ 97 (475)
T 3p1w_A 18 GEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFIL 97 (475)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBEE
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEee
Confidence 456999999999999999999999999999999999999999887532 468888888776
Q ss_pred CCcCCCchHHHHHHHHhcCCc--eeEeeCCCeEEEEc-------CCCcEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHH
Q 006176 215 GFSDKGNLNLITQALAAVGCE--MEVIPDPTTVHFHL-------PNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGE 285 (658)
Q Consensus 215 g~~~~~~~~~~~~ll~~lG~~--~~~~~~~~~~~~~~-------~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~ 285 (658)
. ...+.++|.+.|+. +++.+....+.+.. +++....++.+..+.... ....+.++..+.+|+..
T Consensus 98 ~------~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~-~lLs~~eK~~l~kFL~~ 170 (475)
T 3p1w_A 98 V------GGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVS-PLLSLMEKNRCKNFYQY 170 (475)
T ss_dssp T------TSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEECCCSHHHHHTC-TTSCHHHHHHHHHHHHH
T ss_pred c------CcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEeCCCCHHHHhhc-cCCCHHHHHHHHHHHHH
Confidence 3 33567788888864 33444433333321 245555556554433321 11112344455555443
Q ss_pred HHHHHHHhhhhhhhccchhhHhhhhhhcChhhhhhHhhcccccHHHHHHHhcCCHHHHHHHhhhhhhhccCCCCCchHHH
Q 006176 286 CWKIFNALNSLELKSLEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMIN 365 (658)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~ 365 (658)
+.... ...... + ...+....++.++++++..++.++.++.....+.........++..
T Consensus 171 l~~~~-------~~~~~~--------~-------~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~~~~~~~~~a~~ 228 (475)
T 3p1w_A 171 VSEWD-------ANKRNT--------W-------DNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYLNDDYLKQPAYL 228 (475)
T ss_dssp HHHCC-------TTCGGG--------S-------TTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBHHH
T ss_pred HHhhh-------hccchh--------h-------hcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhcCCCcccCCHHH
Confidence 21100 000000 0 0011235678899999988888887763322111111122234332
Q ss_pred HH---HHHh---Hhh-cCCccccCCChHHHHHHHHHHHHHcCcEEEeCceeeEEEE-eCCEEEEEEECCCcEEEcCEEEE
Q 006176 366 AS---MVLC---DRH-FGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVIL-EQGKAVGVRLSDGREFYAKTIIS 437 (658)
Q Consensus 366 ~~---~~~~---~~~-~~g~~~p~gG~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~-~~~~v~gV~~~~G~~i~ad~VV~ 437 (658)
+. ..+. ..+ ...+.||+||++.++++|.+.++++|++|+++++|++|.. +++++++|++.+|+++.||+||+
T Consensus 229 ~l~ri~~y~~Sl~~yg~s~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~ 308 (475)
T 3p1w_A 229 TLERIKLYMQSISAFGKSPFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVIC 308 (475)
T ss_dssp HHHHHHHHHHHHHHHSSCSEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEE
T ss_pred HHHHHHHHHHHHhhcCCCceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEE
Confidence 22 1111 112 2356799999999999999999999999999999999999 78889999999998999999999
Q ss_pred CCChhHHHhhccCCCCCChHHHHHHHhhccCCceEEEEEeeecCcCCCC-CCcceeeecchhhhhccCCCceEEeccCCC
Q 006176 438 NATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPD-TDCHHFVLEDDWNRLEEPYGSIFLSIPTVL 516 (658)
Q Consensus 438 a~g~~~~~~~Ll~~~~lp~~~~~~~~~~~~~~s~~~v~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 516 (658)
|++.+. ++|... +...........++.+..... .....++++..- +.+. ..+|+..-+.
T Consensus 309 a~~~~~---------~~p~~~-------~~~~~v~R~i~I~~~pi~~~~~~~~~~i~~P~~~--~~~~-~~iy~~~~s~- 368 (475)
T 3p1w_A 309 DPSYVM---------HLKNKI-------KKIGQVIRCICILSNPIPETNQTNSCQIIIPQNQ--LNRK-SDIYINLVSF- 368 (475)
T ss_dssp CGGGCT---------TSTTSE-------EEEEEEEEEEEEESSCCTTSTTCSSEEEEECGGG--GTSS-SCEEEEEEEG-
T ss_pred CCCccc---------cCcccc-------cccceEEEEEEEEeccCcccCCCceEEEEeCCcc--cCCC-CCEEEEEECC-
Confidence 988541 112110 001112233344555542211 112244555421 1111 1356543322
Q ss_pred CCCCCCCCceEEEEEecc
Q 006176 517 DSSLAPEGHHILHIFTIC 534 (658)
Q Consensus 517 d~~~ap~G~~~l~~~~~~ 534 (658)
+...+|.|..++++.+..
T Consensus 369 ~~~~cp~G~~i~~~st~~ 386 (475)
T 3p1w_A 369 QHGVTLKGKYIAIVSATV 386 (475)
T ss_dssp GGTSSCTTCEEEEEEEEC
T ss_pred CcCcCCCCcEEEEEEeec
Confidence 334689999988887765
No 28
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.85 E-value=2.4e-19 Score=187.87 Aligned_cols=325 Identities=14% Similarity=0.138 Sum_probs=185.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCcceeeEeeCCeEEccccccccCCcCCCchHHHHHHHHhcCCce
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEM 236 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~d~G~~~~~g~~~~~~~~~~~~ll~~lG~~~ 236 (658)
.+||+|||||++|+++|+.|+++|++|+|+||...+||++.+....+..+|.|...+.... ..+.++++.+...-
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 76 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARD-----RRFATAVKQWQAQG 76 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCS-----HHHHHHHHHHHHHT
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCC-----HHHHHHHHHHHhCC
Confidence 4799999999999999999999999999999999999999988888888888876664211 11111111110000
Q ss_pred eEeeCCCeEEEEcCCCcEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHhhhhhhcChh
Q 006176 237 EVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRPL 316 (658)
Q Consensus 237 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (658)
.... +... ....
T Consensus 77 ~~~~--------~~~~-~~~~----------------------------------------------------------- 88 (336)
T 1yvv_A 77 HVAE--------WTPL-LYNF----------------------------------------------------------- 88 (336)
T ss_dssp SEEE--------ECCC-EEEE-----------------------------------------------------------
T ss_pred Ceee--------cccc-ceec-----------------------------------------------------------
Confidence 0000 0000 0000
Q ss_pred hhhhHhhcccccHHHHHHHhcCCHHHHHHHhhhhhhhccCCCCCchHHHHHHHHhHhhcCCccccCCChHHHHHHHHHHH
Q 006176 317 ECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGL 396 (658)
Q Consensus 317 ~~~~~~~~~~~s~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~p~gG~~~l~~~L~~~l 396 (658)
.+. ...... .....+....|+..+.+.|.+
T Consensus 89 ---------------------~~~--------------~~~~~~-------------~~~~~~~~~~~~~~l~~~l~~-- 118 (336)
T 1yvv_A 89 ---------------------HAG--------------RLSPSP-------------DEQVRWVGKPGMSAITRAMRG-- 118 (336)
T ss_dssp ---------------------SSS--------------BCCCCC-------------TTSCEEEESSCTHHHHHHHHT--
T ss_pred ---------------------cCc--------------ccccCC-------------CCCccEEcCccHHHHHHHHHc--
Confidence 000 000000 000122344567777776654
Q ss_pred HHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEE-cCEEEECCChhHHHhhccCCCCCChHHHHHHHhhccCCceEEEE
Q 006176 397 ADKGSEILYKANVTKVILEQGKAVGVRLSDGREFY-AKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIH 475 (658)
Q Consensus 397 ~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~-ad~VV~a~g~~~~~~~Ll~~~~lp~~~~~~~~~~~~~~s~~~v~ 475 (658)
|++|+++++|++|..+++++. |++.+|+.+. +|.||+|+|+..+. +++.. .| ........+.+. +..++.
T Consensus 119 ---g~~i~~~~~v~~i~~~~~~~~-v~~~~g~~~~~a~~vV~a~g~~~~~-~~~~~--~~-~l~~~~~~~~~~-~~~~~~ 189 (336)
T 1yvv_A 119 ---DMPVSFSCRITEVFRGEEHWN-LLDAEGQNHGPFSHVIIATPAPQAS-TLLAA--AP-KLASVVAGVKMD-PTWAVA 189 (336)
T ss_dssp ---TCCEECSCCEEEEEECSSCEE-EEETTSCEEEEESEEEECSCHHHHG-GGGTT--CH-HHHHHHTTCCEE-EEEEEE
T ss_pred ---cCcEEecCEEEEEEEeCCEEE-EEeCCCcCccccCEEEEcCCHHHHH-Hhhcc--CH-HHHHHHhhcCcc-ceeEEE
Confidence 789999999999998887765 8888998664 89999999988765 45542 23 233344444444 577888
Q ss_pred EeeecCcCCCCCCcceeeecchhhhhccCCCceEEeccCCCCCCCCCCCceEEEEEec-cccchhcccChhhhHHHHHHH
Q 006176 476 MGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTI-CSIEDWEGLAQKDYDAKKELV 554 (658)
Q Consensus 476 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G~~~l~~~~~-~~~~~w~~l~~~~~~~~ke~~ 554 (658)
+.++.+.+.+. ..+++.+ .+...++. .+ ..|...+.+. .+.++.. .....+.+ ..++++
T Consensus 190 ~~~~~~~~~~~---~~~~~~~------~~~~~l~~--~~-~~p~~~~~~~-~~v~~~~~~~~~~~~~-------~~~~~~ 249 (336)
T 1yvv_A 190 LAFETPLQTPM---QGCFVQD------SPLDWLAR--NR-SKPERDDTLD-TWILHATSQWSRQNLD-------ASREQV 249 (336)
T ss_dssp EEESSCCSCCC---CEEEECS------SSEEEEEE--GG-GSTTCCCSSE-EEEEEECHHHHHHTTT-------SCHHHH
T ss_pred EEecCCCCCCC---CeEEeCC------CceeEEEe--cC-cCCCCCCCCc-EEEEEeCHHHHHHHHh-------CCHHHH
Confidence 88887754321 1222221 23322221 11 1133222222 2222222 11222222 235778
Q ss_pred HHHHHHHHHHhhCCC-CcCc---EEEEEecChhHHHHHhcCCCCcccCCCCCCCCCCCCCCCCCCCCCcEEEeCCCccCC
Q 006176 555 ADEIINRLENKLFPG-LKQS---IAFREIGSPKTHRRYLARDQGTYGPMPRGTPKGLLGMPFNTTGINGLYCVGDSCFPG 630 (658)
Q Consensus 555 ~~~il~~L~~~~~P~-l~~~---i~~~~~~tP~~~~~~~~~~~G~yg~~p~~~~~~~~~~p~~~t~i~gLylaG~~~~pG 630 (658)
.+.+++.+. +.++. +... .+.++. . ++..... ..+....+.++|+||||+++ |
T Consensus 250 ~~~l~~~l~-~~lg~~~~~p~~~~~~rw~-------------~-a~~~~~~-------~~~~~~~~~~rl~laGDa~~-g 306 (336)
T 1yvv_A 250 IEHLHGAFA-ELIDCTMPAPVFSLAHRWL-------------Y-ARPAGAH-------EWGALSDADLGIYVCGDWCL-S 306 (336)
T ss_dssp HHHHHHHHH-TTCSSCCCCCSEEEEEEEE-------------E-EEESSCC-------CCSCEEETTTTEEECCGGGT-T
T ss_pred HHHHHHHHH-HHhCCCCCCCcEEEccccC-------------c-cCCCCCC-------CCCeeecCCCCEEEEecCCC-C
Confidence 888888898 66642 2111 111111 0 0000000 00111134589999999986 5
Q ss_pred CChhHHhhhHHHHHHHHHHHhcccCC
Q 006176 631 QGVIAVAFSGVMCAHRVAADIGNRIG 656 (658)
Q Consensus 631 ~Gv~ga~~sG~~aA~~Il~~lg~~~~ 656 (658)
.||++|+.+|+.+|+.|.+.+..+.+
T Consensus 307 ~gv~~a~~sg~~lA~~l~~~~~~~~~ 332 (336)
T 1yvv_A 307 GRVEGAWLSGQEAARRLLEHLQLEHH 332 (336)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTTC---
T ss_pred CCHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 69999999999999999999987653
No 29
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.82 E-value=7.7e-20 Score=196.51 Aligned_cols=234 Identities=18% Similarity=0.163 Sum_probs=143.2
Q ss_pred CCccEEEECCChhHHHHHHHHHHc-CCeEEEEecCCCCCcceeeEee--CCeEE-ccccccccCCcCCCchHHHHHHHHh
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVK-GARVLVLEKYVIPGGSSGYYER--DGYTF-DVGSSVMFGFSDKGNLNLITQALAA 231 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~-g~~v~~~e~~~~~gg~~~t~~~--~g~~~-d~G~~~~~g~~~~~~~~~~~~ll~~ 231 (658)
.++||+|||||++||+||++|+++ |++|+|+|+++++||++.+... .|+.+ +.|++++.. ....+.+++++
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~-----~~~~~~~~~~~ 80 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHT-----SNKRVWDYVRQ 80 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEE-----SCHHHHHHHTT
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcC-----CcHHHHHHHHH
Confidence 468999999999999999999999 9999999999999999999987 68887 599998874 23567788888
Q ss_pred cCCceeEeeCCCeEEEEcCCCcEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHhhhhh
Q 006176 232 VGCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQF 311 (658)
Q Consensus 232 lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (658)
+|+- ... ..... ...+|..+.++.+...+.. +.... .....+..+... ... ..
T Consensus 81 ~g~~-~~~--~~~~~-~~~~G~~~~~p~~~~~~~~-l~~~~-~~~~~~~~~l~~------~~~-----~~---------- 133 (399)
T 1v0j_A 81 FTDF-TDY--RHRVF-AMHNGQAYQFPMGLGLVSQ-FFGKY-FTPEQARQLIAE------QAA-----EI---------- 133 (399)
T ss_dssp TCCB-CCC--CCCEE-EEETTEEEEESSSHHHHHH-HHTSC-CCHHHHHHHHHH------HGG-----GS----------
T ss_pred hhhh-hcc--ccceE-EEECCEEEeCCCCHHHHHH-Hhccc-CCHHHHHHHHHH------Hhh-----cc----------
Confidence 8862 111 11122 2236666776665433221 11110 011111111100 000 00
Q ss_pred hcChhhhhhHhhcccccHHHHHHHhcCCHHHHHHHhhhhhhhccCCCCCchHHHHHHH---Hh--Hhh-cCCc-cccCCC
Q 006176 312 FKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMV---LC--DRH-FGGI-NYPVGG 384 (658)
Q Consensus 312 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~---~~--~~~-~~g~-~~p~gG 384 (658)
. .....++.+++.+.+.++.+..++..+.....+.++.+.++...... .. ..+ ...+ .+|+||
T Consensus 134 --~--------~~~~~s~~e~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG 203 (399)
T 1v0j_A 134 --D--------TADAQNLEEKAISLIGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDG 203 (399)
T ss_dssp --C--------TTC----CCHHHHHHCHHHHHHHTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTH
T ss_pred --C--------CCCcccHHHHHHHHHhHHHHHHHHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhccccccc
Confidence 0 01134455666666665666666555443334455555554332100 00 000 1123 289999
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEE-EcCEEEECCChhHHH
Q 006176 385 VGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREF-YAKTIISNATRWDTF 445 (658)
Q Consensus 385 ~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i-~ad~VV~a~g~~~~~ 445 (658)
+++++++|++ +.|++|++|++|++|..+ | + ++ .||+||+|+++..++
T Consensus 204 ~~~l~~~l~~---~~g~~I~l~~~V~~I~~~------v---~--~~~~aD~VI~t~p~~~l~ 251 (399)
T 1v0j_A 204 YTAWLQNMAA---DHRIEVRLNTDWFDVRGQ------L---R--PGSPAAPVVYTGPLDRYF 251 (399)
T ss_dssp HHHHHHHHTC---STTEEEECSCCHHHHHHH------H---T--TTSTTCCEEECSCHHHHT
T ss_pred HHHHHHHHHh---cCCeEEEECCchhhhhhh------h---h--hcccCCEEEECCcHHHHH
Confidence 9999999987 458999999999999632 2 1 35 799999999987654
No 30
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.82 E-value=5.8e-18 Score=188.52 Aligned_cols=259 Identities=13% Similarity=0.104 Sum_probs=158.2
Q ss_pred HHHHHHHHhcCCce--eEeeCCCeEEEEcCCCcEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhc
Q 006176 223 NLITQALAAVGCEM--EVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKS 300 (658)
Q Consensus 223 ~~~~~ll~~lG~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (658)
..+.++|..+|+.. ++..... .+.+.+|....++.+...+... ......++..+.+|+..+.. + ..
T Consensus 237 g~lv~LL~~sgV~~yLEFk~v~~--~y~~~~G~~~~VPas~~eif~s-~~Lsl~EKr~L~kFl~~~~~-~------~~-- 304 (650)
T 1vg0_A 237 GLLIDLLIKSNVSRYAEFKNITR--ILAFREGTVEQVPCSRADVFNS-KQLTMVEKRMLMKFLTFCVE-Y------EE-- 304 (650)
T ss_dssp SHHHHHHHHHTGGGGCCEEECCE--EEEESSSSEEECCCSHHHHHHC-SSSCHHHHHHHHHHHHHHHT-G------GG--
T ss_pred cHHHHHHHHcCCcceeeEEEccc--eEEecCCCEeECCCCHHHHHhC-cCCCHHHHHHHHHHHHHHHH-h------cc--
Confidence 35667777777532 2333222 2344677766777766655443 22233455566666554321 0 00
Q ss_pred cchhhHhhhhhhcChhhhhhHhhcccccHHHHHHHhcCCHHHHHHHhhhhhhhccCCCCCchHHHHH---HHHhH--h-h
Q 006176 301 LEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINAS---MVLCD--R-H 374 (658)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~---~~~~~--~-~ 374 (658)
.+ ..+..+...++.+++++++.++.++.++........ ....|+..+. ..+.. . +
T Consensus 305 -------------~p---~~~~~~d~~S~~d~L~~~~ls~~L~~~L~~~lal~~---~~~~pa~~~l~~i~~~l~sl~~y 365 (650)
T 1vg0_A 305 -------------HP---DEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSIAMTS---ETTSCTVDGLKATKKFLQCLGRY 365 (650)
T ss_dssp -------------CH---HHHHTTTTSBHHHHHTTSSSCHHHHHHHHHHTTC-----CCSCBHHHHHHHHHHHHHHTTSS
T ss_pred -------------Ch---HHHhhhccCCHHHHHHHhCCCHHHHHHHHHHHhccC---CCCCchhHHHHHHHHHHHHHHhh
Confidence 00 112345578899999999999999988865332221 1223433332 11111 1 1
Q ss_pred -cCCccccCCChHHHHHHHHHHHHHcCcEEEeCceeeEEEEeC--CEEEEEEECCCcEEEcCEEEECCChhHHHhhccCC
Q 006176 375 -FGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQ--GKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKG 451 (658)
Q Consensus 375 -~~g~~~p~gG~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~--~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~~Ll~~ 451 (658)
.++++||.||++.|+++|.+.++++|++|+++++|++|.+++ +++++|++.+|+++.||.||++.. . ++.
T Consensus 366 g~sg~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~--~-----lp~ 438 (650)
T 1vg0_A 366 GNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDS--Y-----LSE 438 (650)
T ss_dssp SSSSEEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGG--G-----BCT
T ss_pred ccCceEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChh--h-----cCH
Confidence 137889999999999999999999999999999999999998 889999988899999999998332 1 221
Q ss_pred CCCChHHHHHHHhhccCCceEEEEEeeecCcCCCCCC--cceeeecchhhhhccCCCceEEeccCCCCCCCCCCCceEEE
Q 006176 452 EQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTD--CHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILH 529 (658)
Q Consensus 452 ~~lp~~~~~~~~~~~~~~s~~~v~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G~~~l~ 529 (658)
. ... .... ..+..+.+.++.+..+.... ...++++..- . .-..+|+.+++. ++..+|+|+++++
T Consensus 439 ~-~~~-------~~~~-~~v~R~i~i~~~pi~~~~~~~~~~~iiiP~~~-g---~~~~V~i~~~Ss-~~~~cP~G~~Vv~ 504 (650)
T 1vg0_A 439 N-TCS-------RVQY-RQISRAVLITDGSVLRTDADQQVSILTVPAEE-P---GSFAVRVIELCS-STMTCMKGTYLVH 504 (650)
T ss_dssp T-TTT-------TCCC-EEEEEEEEEESSCSSCCSCCCCCEEEEECCSS-T---TSCCEEEEEECG-GGTSSCTTCEEEE
T ss_pred h-Hhc-------cccc-cceEEEEEEecCCCCCcCCCcceEEEEccCcc-C---CCCCEEEEEeCC-CCCCCCCCCEEEE
Confidence 1 100 0111 13556777787765433221 1223343211 1 112478877776 8889999999998
Q ss_pred EEec
Q 006176 530 IFTI 533 (658)
Q Consensus 530 ~~~~ 533 (658)
+.+.
T Consensus 505 lst~ 508 (650)
T 1vg0_A 505 LTCM 508 (650)
T ss_dssp EEEE
T ss_pred EEee
Confidence 8765
No 31
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.81 E-value=2.5e-19 Score=190.28 Aligned_cols=253 Identities=17% Similarity=0.129 Sum_probs=155.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCcceeeEeeCCeEEc-cccccccCCcCCCchHHHHHHHHhcCCc
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFD-VGSSVMFGFSDKGNLNLITQALAAVGCE 235 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~d-~G~~~~~g~~~~~~~~~~~~ll~~lG~~ 235 (658)
++||+|||||++||++|++|+++|++|+|+|+++.+||++.+....|+.+| .|++++... ...+.+++++++..
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~~G~~~~~~~-----~~~~~~~~~~l~~~ 75 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEGIQIHKYGAHIFHTN-----DKYIWDYVNDLVEF 75 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEETTEEEETTSCCCEEES-----CHHHHHHHHTTSCB
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccCCceeeccCCceecCC-----CHHHHHHHHHhhhh
Confidence 379999999999999999999999999999999999999999988999995 999998752 23567788888753
Q ss_pred eeEeeCCCeEEEEcCCCcEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHhhhhhhcCh
Q 006176 236 MEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFFKRP 315 (658)
Q Consensus 236 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (658)
..... .. .. ..+|..+.++.+...+...+... ....+..+.... . ...
T Consensus 76 ~~~~~-~~--~~-~~~g~~~~~p~~~~~~~~l~~~~---~~~~~~~~l~~~-------~----~~~-------------- 123 (367)
T 1i8t_A 76 NRFTN-SP--LA-IYKDKLFNLPFNMNTFHQMWGVK---DPQEAQNIINAQ-------K----KKY-------------- 123 (367)
T ss_dssp CCCCC-CC--EE-EETTEEEESSBSHHHHHHHHCCC---CHHHHHHHHHHH-------T----TTT--------------
T ss_pred hhccc-cc--eE-EECCeEEEcCCCHHHHHHHhccC---CHHHHHHHHHHH-------h----hcc--------------
Confidence 22111 11 12 23566666655544332221111 111111111110 0 000
Q ss_pred hhhhhHhhcccccHHHHHHHhcCCHHHHHHHhhhhhhhccCCCCCchHHHHHHH-Hh----HhhcCCcc--ccCCChHHH
Q 006176 316 LECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMV-LC----DRHFGGIN--YPVGGVGGI 388 (658)
Q Consensus 316 ~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~-~~----~~~~~g~~--~p~gG~~~l 388 (658)
......++.+++.+.+.++....++........+.++.+.++...... .. ..+..+.+ +|+||++.+
T Consensus 124 ------~~~~~~s~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~~~l 197 (367)
T 1i8t_A 124 ------GDKVPENLEEQAISLVGEDLYQALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGYTKL 197 (367)
T ss_dssp ------CCCCCCSHHHHHHHHHHHHHHHHHTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCHHHH
T ss_pred ------CCCCCccHHHHHHHHHhHHHHHHHHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCCHHHH
Confidence 001245667777666655555566655544444566666664432100 00 01112323 899999999
Q ss_pred HHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHHHhhccCCCCCChHHHHHHHhhccC
Q 006176 389 AKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKA 468 (658)
Q Consensus 389 ~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~~Ll~~~~lp~~~~~~~~~~~~~ 468 (658)
+++|++ |++|++|++|++|.. + | ++.+|+||+|+++..++...++ .+.+
T Consensus 198 ~~~l~~-----g~~i~l~~~V~~i~~---~---v------~~~~D~VV~a~p~~~~~~~~l~-------------~l~y- 246 (367)
T 1i8t_A 198 IEKMLE-----GVDVKLGIDFLKDKD---S---L------ASKAHRIIYTGPIDQYFDYRFG-------------ALEY- 246 (367)
T ss_dssp HHHHHT-----TSEEECSCCGGGSHH---H---H------HTTEEEEEECSCHHHHTTTTTC-------------CCCE-
T ss_pred HHHHhc-----CCEEEeCCceeeech---h---h------hccCCEEEEeccHHHHHHHhhC-------------CCCC-
Confidence 999986 689999999998852 1 2 2468999999998765432222 1122
Q ss_pred CceEEEEEeeecCcC
Q 006176 469 PSFLSIHMGVKAEVL 483 (658)
Q Consensus 469 ~s~~~v~l~~~~~~~ 483 (658)
.+...+.+.++.+..
T Consensus 247 ~s~~~v~~~~d~~~~ 261 (367)
T 1i8t_A 247 RSLKFETERHEFPNF 261 (367)
T ss_dssp EEEEEEEEEESSSCS
T ss_pred ceEEEEEEEeccccC
Confidence 244566777776644
No 32
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.79 E-value=5.2e-18 Score=181.16 Aligned_cols=226 Identities=15% Similarity=0.122 Sum_probs=147.3
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCcceeeEee--CCeEE-ccccccccCCcCCCchHHHHHHHHhcC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYER--DGYTF-DVGSSVMFGFSDKGNLNLITQALAAVG 233 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~--~g~~~-d~G~~~~~g~~~~~~~~~~~~ll~~lG 233 (658)
++||+|||||++||++|+.|+++|++|+|+|+++.+||++.+... .|+.+ |.|++++.. ....+.++++++|
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~-----~~~~~~~~~~~l~ 77 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHT-----DNETVWNYVNKHA 77 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEE-----SCHHHHHHHHTTS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCceEeeCCceEECC-----CCHHHHHHHHHHh
Confidence 479999999999999999999999999999999999999999887 78886 999999874 2345778888888
Q ss_pred CceeEeeCCCeEEEEcCCCcEEEEcCCHHHHHHHHHHhCCCc--HHHHHHHHHHHHHHHHHhhhhhhhccchhhHhhhhh
Q 006176 234 CEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHE--KEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQF 311 (658)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (658)
.. . +......+ ..+|..+.++.+...+.. .+... ...+..+... .
T Consensus 78 ~~-~--~~~~~~~~-~~~g~~~~~P~~~~~~~~----l~~~~~~~~~~~~~l~~-------------------------~ 124 (384)
T 2bi7_A 78 EM-M--PYVNRVKA-TVNGQVFSLPINLHTINQ----FFSKTCSPDEARALIAE-------------------------K 124 (384)
T ss_dssp CE-E--ECCCCEEE-EETTEEEEESCCHHHHHH----HTTCCCCHHHHHHHHHH-------------------------H
T ss_pred hh-c--ccccceEE-EECCEEEECCCChhHHHH----HhcccCCHHHHHHHHHH-------------------------h
Confidence 52 1 11111222 235666666666543322 22211 1111111110 0
Q ss_pred hcChhhhhhHhhcccccHHHHHHHhcCCHHHHHHHhhhhhhhccCCCCCchHHHHHHH-----HhHhhcCCcc--ccCCC
Q 006176 312 FKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMV-----LCDRHFGGIN--YPVGG 384 (658)
Q Consensus 312 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~-----~~~~~~~g~~--~p~gG 384 (658)
.... .....++.+++.+.+.++.+..++........+.++.+.++...... ....+..+.+ +|+||
T Consensus 125 ~~~~-------~~~~~sl~e~~~~~~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG 197 (384)
T 2bi7_A 125 GDST-------IADPQTFEEEALRFIGKELYEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCG 197 (384)
T ss_dssp SCCS-------CSSCCBHHHHHHHHHCHHHHHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTH
T ss_pred hhcc-------CCCCcCHHHHHHHhhcHHHHHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcC
Confidence 0000 01245677777777666666666665555445566666665432100 0001112223 89999
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceee-EEEEeCCEEEEEEECCCcEEEcCEEEECCChhHHHh
Q 006176 385 VGGIAKSLAKGLADKGSEILYKANVT-KVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFG 446 (658)
Q Consensus 385 ~~~l~~~L~~~l~~~G~~I~~~~~V~-~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~ 446 (658)
++.++++|++ +.|++|++|++|+ +|.. .+|+||+|+++..++.
T Consensus 198 ~~~l~~~l~~---~~g~~I~l~~~V~~~i~~----------------~~d~VI~a~p~~~~~~ 241 (384)
T 2bi7_A 198 YTQMIKSILN---HENIKVDLQREFIVEERT----------------HYDHVFYSGPLDAFYG 241 (384)
T ss_dssp HHHHHHHHHC---STTEEEEESCCCCGGGGG----------------GSSEEEECSCHHHHTT
T ss_pred HHHHHHHHHh---cCCCEEEECCeeehhhhc----------------cCCEEEEcCCHHHHHH
Confidence 9999999976 3589999999999 7742 2999999999877654
No 33
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.66 E-value=1.1e-14 Score=158.47 Aligned_cols=72 Identities=21% Similarity=0.281 Sum_probs=61.8
Q ss_pred CccccCC-C---hHHHHHHHHHHHHHcCcEEEeCc---eeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHHHhhcc
Q 006176 377 GINYPVG-G---VGGIAKSLAKGLADKGSEILYKA---NVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLL 449 (658)
Q Consensus 377 g~~~p~g-G---~~~l~~~L~~~l~~~G~~I~~~~---~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~~Ll 449 (658)
+.+.+.+ | ...+.+.|.+.++++|++|++++ +|++|..+++++++|++.+|+++.||.||+|+|.++ ..++
T Consensus 148 g~~~~~~~g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s--~~l~ 225 (438)
T 3dje_A 148 GYFARSGAGWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASA--GQFL 225 (438)
T ss_dssp EEEESSSCEEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGG--GGTS
T ss_pred EEEeCCCCEEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCCh--hhhc
Confidence 4455555 5 36889999999999999999999 999999999999999999998899999999999987 3454
Q ss_pred C
Q 006176 450 K 450 (658)
Q Consensus 450 ~ 450 (658)
+
T Consensus 226 ~ 226 (438)
T 3dje_A 226 D 226 (438)
T ss_dssp C
T ss_pred C
Confidence 3
No 34
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.62 E-value=5.2e-15 Score=157.32 Aligned_cols=229 Identities=13% Similarity=0.133 Sum_probs=149.2
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCcceeeEe-eCCeEE-ccccccccCCcCCCchHHHHHHHHhc
Q 006176 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYE-RDGYTF-DVGSSVMFGFSDKGNLNLITQALAAV 232 (658)
Q Consensus 155 ~~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~-~~g~~~-d~G~~~~~g~~~~~~~~~~~~ll~~l 232 (658)
...+||+|||||++||++|+.|+++|++|+|+|+.+.+||++.+.. ..|+.+ |.|+|.+.. ....+.++++++
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~~-----~~~~~~~~~~~~ 101 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFHT-----NSKDVFEYLSRF 101 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCEE-----SCHHHHHHHHTS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCceEeecCCcccCC-----ChHHHHHHHHHh
Confidence 3568999999999999999999999999999999999999999877 688875 999999874 345678899998
Q ss_pred CCceeEeeCCCeEEEEcCCCcEEEEcCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhhhhhhhccchhhHhhhhhh
Q 006176 233 GCEMEVIPDPTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKSLEEPIYLFGQFF 312 (658)
Q Consensus 233 G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (658)
|... +..... +.+.+|..+.++.....+.. +... +........+... ..
T Consensus 102 ~~~~---~~~~~~-~~~~~g~l~~lP~~~~~~~~-l~~~-~~~~~~~~~~l~~-------------~~------------ 150 (397)
T 3hdq_A 102 TEWR---PYQHRV-LASVDGQLLPIPINLDTVNR-LYGL-NLTSFQVEEFFAS-------------VA------------ 150 (397)
T ss_dssp CCEE---ECCCBE-EEEETTEEEEESCCHHHHHH-HHTC-CCCHHHHHHHHHH-------------HC------------
T ss_pred hhcc---cccccc-eEEECCEEEEcCCChHHHHH-hhcc-CCCHHHHHHHHhh-------------cc------------
Confidence 8532 111111 22346777777766543321 2111 1111111111100 00
Q ss_pred cChhhhhhHhhcccccHHHHHHHhcCCHHHHHHHhhhhhhhccCCCCCchHHHHHHHHh-----Hhh-cCCc-cccCCCh
Q 006176 313 KRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQTPMINASMVLC-----DRH-FGGI-NYPVGGV 385 (658)
Q Consensus 313 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~-----~~~-~~g~-~~p~gG~ 385 (658)
.....+.++.+++.+.+..+....++..+..-..+.++.+.++.....+-. ..+ .... .+|+||+
T Consensus 151 --------~~~~~~~s~~e~~~~~~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~Rvp~~~~~d~~yf~~~~qg~P~gGy 222 (397)
T 3hdq_A 151 --------EKVEQVRTSEDVVVSKVGRDLYNKFFRGYTRKQWGLDPSELDASVTARVPTRTNRDNRYFADTYQAMPLHGY 222 (397)
T ss_dssp --------CCCSSCCBHHHHHHHHHHHHHHHHHTHHHHHHHHSSCGGGSBTTTGGGSCCCSSCCCBSCCCSEEEEETTCH
T ss_pred --------cCCCCCcCHHHHHHHhcCHHHHHHHHHHHhCchhCCCHHHHHHHHHHhcCcccccCccchhhhheeccCCCH
Confidence 001235677788877777777777777776666667777776542211100 000 1122 3699999
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDT 444 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~ 444 (658)
.++.++|++ ..|++|++|++|+++ +.++.+|+||+|++....
T Consensus 223 ~~l~e~l~~---~~g~~V~l~~~v~~~--------------~~~~~~d~vI~T~P~d~~ 264 (397)
T 3hdq_A 223 TRMFQNMLS---SPNIKVMLNTDYREI--------------ADFIPFQHMIYTGPVDAF 264 (397)
T ss_dssp HHHHHHHTC---STTEEEEESCCGGGT--------------TTTSCEEEEEECSCHHHH
T ss_pred HHHHHHHHh---ccCCEEEECCeEEec--------------cccccCCEEEEcCCHHHH
Confidence 999988854 459999999999732 445679999998875443
No 35
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.62 E-value=1e-14 Score=153.86 Aligned_cols=80 Identities=21% Similarity=0.300 Sum_probs=69.6
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCeEEEEecC-CCCCcceeeEe----------eCCeEEccccccccCCcCCCchH
Q 006176 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKY-VIPGGSSGYYE----------RDGYTFDVGSSVMFGFSDKGNLN 223 (658)
Q Consensus 155 ~~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~-~~~gg~~~t~~----------~~g~~~d~G~~~~~g~~~~~~~~ 223 (658)
...+||+|||||++||+||+.|+++|++|+|+|+. +++||++.++. ..|+.+|.|++++.. ...
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~-----~~~ 116 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPS-----FHP 116 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEET-----TCH
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecc-----hHH
Confidence 45689999999999999999999999999999999 99999999887 357899999998764 345
Q ss_pred HHHHHHHhcCCceeEe
Q 006176 224 LITQALAAVGCEMEVI 239 (658)
Q Consensus 224 ~~~~ll~~lG~~~~~~ 239 (658)
.+.++++++|+.....
T Consensus 117 ~~~~~~~~lGl~~~~~ 132 (376)
T 2e1m_A 117 LTLALIDKLGLKRRLF 132 (376)
T ss_dssp HHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHcCCCccee
Confidence 6889999999976553
No 36
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.59 E-value=2.3e-13 Score=144.96 Aligned_cols=210 Identities=17% Similarity=0.244 Sum_probs=119.7
Q ss_pred ccccCCCh---HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHH-HhhccCCCC
Q 006176 378 INYPVGGV---GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDT-FGKLLKGEQ 453 (658)
Q Consensus 378 ~~~p~gG~---~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~-~~~Ll~~~~ 453 (658)
.+.+.+|. ..+.+.|.+.++++|++|+.+++|++|..+++++++|++.+| ++.||.||+|+|.+.. +...++...
T Consensus 138 ~~~~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~ 216 (382)
T 1y56_B 138 SWNPTDGKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIKT 216 (382)
T ss_dssp EEETTCCEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCCS
T ss_pred EEcCCCeeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcCCCc
Confidence 34444443 588899999999999999999999999998888888988888 7999999999999862 223332110
Q ss_pred -CChHHHHHHHhhccCCceEEEE-EeeecCcCCCCCCcceeeecchhhhhccCCCceEEeccCCCCCCCCCCCceEEEEE
Q 006176 454 -LPKEEENFQKLYVKAPSFLSIH-MGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIF 531 (658)
Q Consensus 454 -lp~~~~~~~~~~~~~~s~~~v~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G~~~l~~~ 531 (658)
+|- ....-+ +.++ +. ++... ...++..++ ..+|+. |. ++| ++.-.
T Consensus 217 ~~~~-------------~~~~g~~~~~~-~~-~~~~~-~~~~~~~~~-------~~~y~~-p~-------~~g--~~iG~ 263 (382)
T 1y56_B 217 KIPI-------------EPYKHQAVITQ-PI-KRGTI-NPMVISFKY-------GHAYLT-QT-------FHG--GIIGG 263 (382)
T ss_dssp CCCC-------------EEEEEEEEEEC-CC-STTSS-CSEEEESTT-------TTEEEE-CC-------SSS--CCEEE
T ss_pred CcCC-------------CeeEeEEEEEc-cC-CcccC-CCeEEecCC-------CeEEEE-Ee-------CCe--EEEec
Confidence 221 011111 2222 11 11111 022222110 113332 21 223 11111
Q ss_pred e-ccccchhcccChhhhHHHHHHHHHHHHHHHHHhhCCCCcCc-EEEEEecChhHHHHHhcCCCCcccCCCCCCCCCCCC
Q 006176 532 T-ICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLKQS-IAFREIGSPKTHRRYLARDQGTYGPMPRGTPKGLLG 609 (658)
Q Consensus 532 ~-~~~~~~w~~l~~~~~~~~ke~~~~~il~~L~~~~~P~l~~~-i~~~~~~tP~~~~~~~~~~~G~yg~~p~~~~~~~~~ 609 (658)
. ......+.. . ..++..+.+++.+. +++|.+.+. ++..+ .|.+...|+..| +++
T Consensus 264 ~~~~~~~~~~~-~------~~~~~~~~l~~~~~-~~~p~l~~~~~~~~~--------------~g~r~~t~d~~p--~ig 319 (382)
T 1y56_B 264 IGYEIGPTYDL-T------PTYEFLREVSYYFT-KIIPALKNLLILRTW--------------AGYYAKTPDSNP--AIG 319 (382)
T ss_dssp CSCCBSSCCCC-C------CCHHHHHHHHHHHH-HHCGGGGGSEEEEEE--------------EEEEEECTTSCC--EEE
T ss_pred CCCCCCCCCCC-C------CCHHHHHHHHHHHH-HhCCCcCCCCceEEE--------------EeccccCCCCCc--Eec
Confidence 0 111111111 0 11345667778887 889998753 33222 344444454433 122
Q ss_pred CCCCCCCCCcEEEeCCCccCCCChhHHhhhHHHHHHHHHHH
Q 006176 610 MPFNTTGINGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAAD 650 (658)
Q Consensus 610 ~p~~~t~i~gLylaG~~~~pG~Gv~ga~~sG~~aA~~Il~~ 650 (658)
. ....+|+|++..+ .|+|+..+..+|+.+|+.|...
T Consensus 320 ~---~~~~~~~~~~~G~--~g~G~~~a~~~g~~la~~i~~~ 355 (382)
T 1y56_B 320 R---IEELNDYYIAAGF--SGHGFMMAPAVGEMVAELITKG 355 (382)
T ss_dssp E---ESSSBTEEEEECC--TTCHHHHHHHHHHHHHHHHHHS
T ss_pred c---CCCCCCEEEEEec--CcchHhhhHHHHHHHHHHHhCC
Confidence 1 2346899998764 4889999999999999999865
No 37
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.59 E-value=1.9e-13 Score=156.83 Aligned_cols=67 Identities=13% Similarity=0.248 Sum_probs=58.4
Q ss_pred CCccccCCCh---HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 376 GGINYPVGGV---GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 376 ~g~~~p~gG~---~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
++.+++.+|. ..+++.|.+.++++|++|+++++|++|..+++++ .|++.+|.++.||.||+|+|.+.
T Consensus 404 gg~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v-~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 404 SGITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCW-LLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp CEEEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEE-EEEETTSCEEEESEEEECCGGGG
T ss_pred CcEEecCCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeE-EEEECCCCEEECCEEEECCCcch
Confidence 3555666664 6899999999999999999999999999998886 68888888899999999999886
No 38
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.58 E-value=6.2e-14 Score=149.04 Aligned_cols=66 Identities=18% Similarity=0.382 Sum_probs=56.5
Q ss_pred CCccccCCCh---HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 376 GGINYPVGGV---GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 376 ~g~~~p~gG~---~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
++.+.+.+|. ..+++.|.+.++++|++|+++++|++|..++++ ++|++.+| ++.||.||+|+|.|.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~-~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 141 GATYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGA-WEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp CEEEETTCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTE-EEEECSSE-EEEESEEEECCGGGH
T ss_pred EEEEcCCCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCe-EEEEeCCC-EEEcCEEEECCChhH
Confidence 3455565553 689999999999999999999999999998887 56888888 799999999999986
No 39
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.57 E-value=2.4e-14 Score=152.52 Aligned_cols=205 Identities=13% Similarity=0.173 Sum_probs=117.1
Q ss_pred CccccCCCh---HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHH-HhhccCCC
Q 006176 377 GINYPVGGV---GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDT-FGKLLKGE 452 (658)
Q Consensus 377 g~~~p~gG~---~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~-~~~Ll~~~ 452 (658)
+.+++.+|. ..+.+.|.+.+++.|++|+++++|++|..+++++ +|++.+| ++.||.||+|+|.+.. +...++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~-~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~~- 228 (382)
T 1ryi_A 152 ASFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEAL-FIKTPSG-DVWANHVVVASGVWSGMFFKQLGL- 228 (382)
T ss_dssp EEEETTCCBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSE-EEEETTE-EEEEEEEEECCGGGTHHHHHHTTC-
T ss_pred EEEeCCCeEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEE-EEEcCCc-eEEcCEEEECCChhHHHHHHhcCC-
Confidence 445555554 6889999999999999999999999999888777 6888877 7999999999998763 2222221
Q ss_pred CCChHHHHHHHhhccCCceEEEEEeeecCcCCCCCCcceeeecchhhhhccCCCceEEeccCCCCCCCCCCCceEEEEEe
Q 006176 453 QLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFT 532 (658)
Q Consensus 453 ~lp~~~~~~~~~~~~~~s~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G~~~l~~~~ 532 (658)
.+|- . ..-...+.++.+. +.. ...++.+ . .|+ .|. ++|. +.+-.
T Consensus 229 ~~~~---------~---~~~g~~~~~~~~~--~~~--~~~~~~~--------~--~~~-~p~-------~~g~--~~vG~ 272 (382)
T 1ryi_A 229 NNAF---------L---PVKGECLSVWNDD--IPL--TKTLYHD--------H--CYI-VPR-------KSGR--LVVGA 272 (382)
T ss_dssp CCCC---------E---EEEEEEEEEECCS--SCC--CSEEEET--------T--EEE-EEC-------TTSE--EEEEC
T ss_pred CCce---------e---ccceEEEEECCCC--CCc--cceEEcC--------C--EEE-EEc-------CCCe--EEEee
Confidence 1111 0 1111222333221 111 1122211 1 222 121 1232 21211
Q ss_pred ccccchhcccChhhhHHHHHHHHHHHHHHHHHhhCCCCcCc-EEEEEecChhHHHHHhcCCCCcccCCCCCCCCCCCCCC
Q 006176 533 ICSIEDWEGLAQKDYDAKKELVADEIINRLENKLFPGLKQS-IAFREIGSPKTHRRYLARDQGTYGPMPRGTPKGLLGMP 611 (658)
Q Consensus 533 ~~~~~~w~~l~~~~~~~~ke~~~~~il~~L~~~~~P~l~~~-i~~~~~~tP~~~~~~~~~~~G~yg~~p~~~~~~~~~~p 611 (658)
......|... ..++..+.+++.+. +++|.+.+. ++..+ .|.+...|+..+ +++.
T Consensus 273 ~~~~~~~~~~-------~~~~~~~~l~~~~~-~~~p~l~~~~~~~~w--------------~g~~~~t~d~~p--~ig~- 327 (382)
T 1ryi_A 273 TMKPGDWSET-------PDLGGLESVMKKAK-TMLPAIQNMKVDRFW--------------AGLRPGTKDGKP--YIGR- 327 (382)
T ss_dssp CCEETCCCCS-------CCHHHHHHHHHHHH-HHCGGGGGSEEEEEE--------------EEEEEECSSSCC--EEEE-
T ss_pred cccccCCCCC-------CCHHHHHHHHHHHH-HhCCCcCCCceeeEE--------------EEecccCCCCCc--Eecc-
Confidence 1111112111 12345667788888 889998753 33222 233333343322 1111
Q ss_pred CCCCCCCcEEEeCCCccCCCChhHHhhhHHHHHHHHHH
Q 006176 612 FNTTGINGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAA 649 (658)
Q Consensus 612 ~~~t~i~gLylaG~~~~pG~Gv~ga~~sG~~aA~~Il~ 649 (658)
....+|+|+++.. .|.|+..|..+|+.+|+.|+.
T Consensus 328 --~~~~~~l~~~~G~--~g~G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 328 --HPEDSRILFAAGH--FRNGILLAPATGALISDLIMN 361 (382)
T ss_dssp --ETTEEEEEEEECC--SSCTTTTHHHHHHHHHHHHTT
T ss_pred --CCCcCCEEEEEcC--CcchHHHhHHHHHHHHHHHhC
Confidence 1235799998775 488999999999999999864
No 40
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.56 E-value=2e-13 Score=156.74 Aligned_cols=67 Identities=16% Similarity=0.261 Sum_probs=57.2
Q ss_pred CCccccCCCh---HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCc-EEEcCEEEECCChhH
Q 006176 376 GGINYPVGGV---GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGR-EFYAKTIISNATRWD 443 (658)
Q Consensus 376 ~g~~~p~gG~---~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~-~i~ad~VV~a~g~~~ 443 (658)
++.+++.+|. ..++++|.+.++++|++|+++++|++|..+++++ .|++.+|+ ++.||.||+|+|.+.
T Consensus 399 gg~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v-~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 399 DGIHYPAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQW-QLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp CEEEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSE-EEEEC-CCCCEEESEEEECCGGGT
T ss_pred ceEEecCCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeE-EEEeCCCcEEEECCEEEECCCcch
Confidence 4566666665 6899999999999999999999999999988875 58888887 799999999999885
No 41
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.56 E-value=2.2e-13 Score=145.23 Aligned_cols=64 Identities=27% Similarity=0.374 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEEC-CCc--EEEcCEEEECCChhHHHhhccC
Q 006176 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLS-DGR--EFYAKTIISNATRWDTFGKLLK 450 (658)
Q Consensus 387 ~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~-~G~--~i~ad~VV~a~g~~~~~~~Ll~ 450 (658)
.+.+.|.+.+++.|++++++++|+.+..+++++++|... +++ ++.||.||-|.|..+.+.+.++
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~~g 169 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWAG 169 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHHT
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCccccHHHHHcC
Confidence 455668888888999999999999999999998877653 332 5889999999998887766654
No 42
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.55 E-value=4.4e-13 Score=143.81 Aligned_cols=66 Identities=21% Similarity=0.323 Sum_probs=57.0
Q ss_pred CccccCCCh---HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 377 GINYPVGGV---GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 377 g~~~p~gG~---~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
+.+.+.+|. ..+.+.|.+.+++.|++|+++++|++|..+++++++|++.+| ++.||.||+|+|.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 162 ATWQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp EEEETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 445555554 488999999999999999999999999988888888998888 699999999999886
No 43
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.54 E-value=5.5e-12 Score=135.03 Aligned_cols=65 Identities=18% Similarity=0.289 Sum_probs=53.5
Q ss_pred CccccCCCh---HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 377 GINYPVGGV---GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 377 g~~~p~gG~---~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
+.+.+.+|. ..+.+.|.+.+++.|++|+++++|++|..+++++. |++.+| ++.||.||+|+|.+.
T Consensus 141 ~~~~~~~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~-v~t~~g-~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 141 GFLQPDGGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPDADGVS-VTTDRG-TYRAGKVVLACGPYT 208 (397)
T ss_dssp EEEETTCEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEE-EEESSC-EEEEEEEEECCGGGH
T ss_pred EEEcCCCCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEE-EEECCC-EEEcCEEEEcCCcCh
Confidence 344455543 57888999999999999999999999998888765 777666 699999999999884
No 44
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.53 E-value=5.3e-13 Score=141.03 Aligned_cols=66 Identities=8% Similarity=0.176 Sum_probs=54.8
Q ss_pred ccccCCC---hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCC--cEEEcCEEEECCChhH
Q 006176 378 INYPVGG---VGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDG--REFYAKTIISNATRWD 443 (658)
Q Consensus 378 ~~~p~gG---~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G--~~i~ad~VV~a~g~~~ 443 (658)
.+.+.+| ...+.+.|.+.++++|++|+++++|++|..++++++.|++.+| .++.||.||+|+|.++
T Consensus 139 ~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 139 LVSPSTGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred eECCCCEEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcch
Confidence 3444444 3689999999999999999999999999988766345888888 3799999999999986
No 45
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.52 E-value=6.6e-14 Score=148.56 Aligned_cols=70 Identities=23% Similarity=0.316 Sum_probs=56.8
Q ss_pred CccccCCCh---HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHHHhhccC
Q 006176 377 GINYPVGGV---GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLK 450 (658)
Q Consensus 377 g~~~p~gG~---~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~~Ll~ 450 (658)
+.+.+.+|. ..+.+.|.+.+++.|++|+.+++|++|..+++++ .|++.+|+ +.||.||+|+|++. ..+++
T Consensus 137 ~~~~~~~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~-~v~~~~g~-~~a~~vV~a~G~~s--~~l~~ 209 (372)
T 2uzz_A 137 GLFETDSGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGV-TIETADGE-YQAKKAIVCAGTWV--KDLLP 209 (372)
T ss_dssp EEEESSCEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSE-EEEESSCE-EEEEEEEECCGGGG--GGTST
T ss_pred EEEeCCCcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEE-EEEECCCe-EEcCEEEEcCCccH--Hhhcc
Confidence 445555554 5889999999999999999999999999877765 48888775 99999999999986 35554
No 46
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.52 E-value=3.1e-12 Score=128.18 Aligned_cols=58 Identities=29% Similarity=0.440 Sum_probs=54.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCcceeeEeeCCeEEcccccccc
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMF 214 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~t~~~~g~~~d~G~~~~~ 214 (658)
.+||+||||||+||+||+.|+++|++|+||||.+.+||++.+.+.++..+|.|...+.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~~~~~d~g~~~~~ 59 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFT 59 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccCCceeecCccccc
Confidence 4799999999999999999999999999999999999999999999999998876654
No 47
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.49 E-value=4.9e-12 Score=134.86 Aligned_cols=56 Identities=13% Similarity=0.330 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
..+.+.|.+.++++|++|+.+++|++|..+++++. |++.+| ++.||.||+|+|.+.
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~-v~~~~g-~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVK-IETANG-SYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEE-EEETTE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEE-EEeCCC-EEEeCEEEEecCccH
Confidence 58889999999999999999999999998777654 777766 699999999999886
No 48
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.43 E-value=3e-12 Score=139.52 Aligned_cols=58 Identities=21% Similarity=0.365 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEE---------------eCCEEEEEEECCCcEE--EcCEEEECCChhHH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVIL---------------EQGKAVGVRLSDGREF--YAKTIISNATRWDT 444 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~---------------~~~~v~gV~~~~G~~i--~ad~VV~a~g~~~~ 444 (658)
..+.+.|.+.++++|++|+++++|++|.. +++++++|++.+| ++ .||.||+|+|++..
T Consensus 181 ~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~ 255 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSN 255 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHH
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHH
Confidence 58899999999999999999999999998 6677778988888 58 99999999999864
No 49
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.41 E-value=3.2e-11 Score=128.80 Aligned_cols=64 Identities=27% Similarity=0.345 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEE---CCCcEEEcCEEEECCChhHHHhhccC
Q 006176 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRL---SDGREFYAKTIISNATRWDTFGKLLK 450 (658)
Q Consensus 387 ~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~---~~G~~i~ad~VV~a~g~~~~~~~Ll~ 450 (658)
.+.+.|.+.+++.|++|+.+++|++|..+++++++|++ .++.++.||.||.|+|.+..+.+.++
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~~~~~~g 169 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWAG 169 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcchHhHHhcC
Confidence 56677888888899999999999999999999888887 34567999999999999887666654
No 50
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.40 E-value=9.3e-12 Score=133.78 Aligned_cols=60 Identities=10% Similarity=0.185 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHHHhhcc
Q 006176 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLL 449 (658)
Q Consensus 387 ~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~~Ll 449 (658)
.+.+.|.+.+.+ ++|+++++|++|..+++.++ |++.+|+++.||.||.|.|.++.+.+.+
T Consensus 128 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~-v~~~~g~~~~a~~vV~AdG~~S~vr~~l 187 (407)
T 3rp8_A 128 ELQREMLDYWGR--DSVQFGKRVTRCEEDADGVT-VWFTDGSSASGDLLIAADGSHSALRPWV 187 (407)
T ss_dssp HHHHHHHHHHCG--GGEEESCCEEEEEEETTEEE-EEETTSCEEEESEEEECCCTTCSSHHHH
T ss_pred HHHHHHHHhCCc--CEEEECCEEEEEEecCCcEE-EEEcCCCEEeeCEEEECCCcChHHHHHh
Confidence 566667777766 89999999999999988865 8899999999999999999987766655
No 51
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.37 E-value=3.7e-11 Score=140.88 Aligned_cols=67 Identities=25% Similarity=0.397 Sum_probs=58.0
Q ss_pred CccccCCCh---HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHH
Q 006176 377 GINYPVGGV---GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDT 444 (658)
Q Consensus 377 g~~~p~gG~---~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~ 444 (658)
+++.+.+|. ..+++.|.+.++++|++|+++++|++|..+++++++|++.+| ++.||.||+|+|.+..
T Consensus 139 g~~~~~~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~ 208 (830)
T 1pj5_A 139 GLHVPSDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGA 208 (830)
T ss_dssp EEEETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHH
T ss_pred EEEECCCceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchH
Confidence 445555553 588999999999999999999999999999898888988888 6999999999999873
No 52
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.35 E-value=1.7e-11 Score=132.14 Aligned_cols=64 Identities=20% Similarity=0.292 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEE-EEEEECCCc--EEEcCEEEECCChhHHHhhccC
Q 006176 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKA-VGVRLSDGR--EFYAKTIISNATRWDTFGKLLK 450 (658)
Q Consensus 387 ~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v-~gV~~~~G~--~i~ad~VV~a~g~~~~~~~Ll~ 450 (658)
.+.+.|.+.+++.|++|+++++|++|..+++++ +.|++.+|+ ++.||.||.|+|.+..+.++++
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~g 173 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRVIPRMFG 173 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhcC
Confidence 666778888888899999999999999887654 456678887 6999999999999887666655
No 53
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.30 E-value=8.8e-11 Score=130.90 Aligned_cols=63 Identities=11% Similarity=0.125 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHcCcEEEeCceeeEEEEeCC----EEEEEEECCC---cEEEcCEEEECCChhHHHhhccC
Q 006176 387 GIAKSLAKGLADKGSEILYKANVTKVILEQG----KAVGVRLSDG---REFYAKTIISNATRWDTFGKLLK 450 (658)
Q Consensus 387 ~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~----~v~gV~~~~G---~~i~ad~VV~a~g~~~~~~~Ll~ 450 (658)
.+.+.|.+.+++.|++|+++++|++|..+++ .++ |++.++ .++.||.||.|.|.++.+.+.++
T Consensus 121 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~-v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lg 190 (535)
T 3ihg_A 121 KLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVT-ARLAGPDGEYDLRAGYLVGADGNRSLVRESLG 190 (535)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEE-EEEEETTEEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEE-EEEEcCCCeEEEEeCEEEECCCCcchHHHHcC
Confidence 5667788889999999999999999998887 665 666665 67999999999999987777764
No 54
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.29 E-value=2.4e-11 Score=130.62 Aligned_cols=64 Identities=13% Similarity=0.124 Sum_probs=54.5
Q ss_pred ccccCCChHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 378 INYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 378 ~~~p~gG~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
..++......+.+.|.+.+++.|++|+++++|++|..+++.+ .|++.+| ++.||.||+|+|.+.
T Consensus 124 ~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~-~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 124 QLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGF-RVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEE-EEEETTE-EEEESEEEECCCCSS
T ss_pred EEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEE-EEEECCc-EEEeeEEEECCCCcc
Confidence 334555567889999999999999999999999999888875 4888888 799999999999875
No 55
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.29 E-value=2.3e-10 Score=124.69 Aligned_cols=64 Identities=23% Similarity=0.292 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEEC---CCc--EEEcCEEEECCChhHHHhhccC
Q 006176 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLS---DGR--EFYAKTIISNATRWDTFGKLLK 450 (658)
Q Consensus 387 ~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~---~G~--~i~ad~VV~a~g~~~~~~~Ll~ 450 (658)
.+.+.|.+.+.+.|++|+++++|++|..+++++++|++. +|+ ++.||.||.|.|.+..+.+.++
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l~ 169 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLP 169 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGSC
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhcC
Confidence 566778888888999999999999999999988877764 676 7899999999999887666664
No 56
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.27 E-value=2.8e-10 Score=127.65 Aligned_cols=65 Identities=17% Similarity=0.155 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEEC-CC--cEEEcCEEEECCChhHHHhhccC
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLS-DG--REFYAKTIISNATRWDTFGKLLK 450 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~-~G--~~i~ad~VV~a~g~~~~~~~Ll~ 450 (658)
..+.+.|.+.+++.|++++.+++|++|..+++.+++|++. +| .++.||.||.|+|.++.+.+.++
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~lr~~lg 195 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGGPISRKLG 195 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGCHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcchhHHHcC
Confidence 3677788889999999999999999999876666678886 67 57999999999999876655554
No 57
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.26 E-value=5e-11 Score=133.72 Aligned_cols=59 Identities=17% Similarity=0.280 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeC-CEEEEEEEC--CCc--EEEcCEEEECCChhHH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQ-GKAVGVRLS--DGR--EFYAKTIISNATRWDT 444 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~-~~v~gV~~~--~G~--~i~ad~VV~a~g~~~~ 444 (658)
..+.+.|.+.+++.|++|+++++|++|..++ +++++|++. +|+ ++.||.||+|+|.+..
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 5788999999999999999999999999888 888888775 675 5899999999997763
No 58
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.26 E-value=5.8e-11 Score=131.45 Aligned_cols=60 Identities=17% Similarity=0.283 Sum_probs=51.3
Q ss_pred ChHHHHHHHHHHHHHcCcEEEeCceeeEEEEe-CCEEEEEEECCC-c--EEEcC-EEEECCChhH
Q 006176 384 GVGGIAKSLAKGLADKGSEILYKANVTKVILE-QGKAVGVRLSDG-R--EFYAK-TIISNATRWD 443 (658)
Q Consensus 384 G~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~-~~~v~gV~~~~G-~--~i~ad-~VV~a~g~~~ 443 (658)
|...+.+.|.+.++++|++|+++++|++|..+ ++++++|++.++ + ++.|| .||+|+|.+.
T Consensus 200 g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 200 GGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp TTHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred CHHHHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 44489999999999999999999999999998 789999987543 2 58895 9999999775
No 59
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.25 E-value=6.3e-11 Score=133.05 Aligned_cols=58 Identities=10% Similarity=0.170 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeC-CEEEEEEEC--CCc--EEEcCEEEECCChhH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQ-GKAVGVRLS--DGR--EFYAKTIISNATRWD 443 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~-~~v~gV~~~--~G~--~i~ad~VV~a~g~~~ 443 (658)
..+.+.|.+.+++.|++|+++++|++|..++ +++++|++. +|+ ++.||.||+|+|.+.
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 5788999999999999999999999999887 888888775 675 689999999999764
No 60
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.23 E-value=6e-11 Score=129.14 Aligned_cols=59 Identities=19% Similarity=0.256 Sum_probs=54.1
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 385 VGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 385 ~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
...+.+.|.+.+++.|++|+++++|++|..+++++.+|++.+|+++.||.||+|+|.+.
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 46888999999999999999999999999888888889999998899999999999776
No 61
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.19 E-value=3e-11 Score=135.09 Aligned_cols=58 Identities=29% Similarity=0.483 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECC---C--cEEEcCEEEECCChhH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSD---G--REFYAKTIISNATRWD 443 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~---G--~~i~ad~VV~a~g~~~ 443 (658)
..++..|.+.++++|++|+++++|++|..+++++++|++.+ | .++.||.||+|+|+|.
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 57899999999999999999999999999999988898864 4 3689999999999997
No 62
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.19 E-value=6e-10 Score=123.37 Aligned_cols=63 Identities=22% Similarity=0.345 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEE--CCCc--EEEcCEEEECCChhHHHhhcc
Q 006176 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRL--SDGR--EFYAKTIISNATRWDTFGKLL 449 (658)
Q Consensus 387 ~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~--~~G~--~i~ad~VV~a~g~~~~~~~Ll 449 (658)
.+.+.|.+.+++.|++|+++++|++|..+++++++|++ .+|+ ++.||.||.|+|.+..+.+.+
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~vr~~l 178 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRTRVSQAV 178 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCSSGGGT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchHHHHHc
Confidence 67777888888899999999999999999998877765 4574 799999999999987666555
No 63
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.17 E-value=1.5e-11 Score=133.88 Aligned_cols=91 Identities=20% Similarity=0.095 Sum_probs=76.3
Q ss_pred CCCCCCCCCCcccccccccccccccccccccccchhhhcCCCCCCCCCCCCccEEEECCChhHHHHHHHHHHcCCeEEEE
Q 006176 107 NFNGSTLRSEDLGCGESERNRDFALMAKTVMSVDNLVEIGGNEGMSRGADDYDAIVIGSGIGGLVAATQLAVKGARVLVL 186 (658)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~ 186 (658)
.||++.+||+.|+++.....++.|..+++++.+......+..+..+.....+||+|||||++||++|+.|+++|++|+|+
T Consensus 72 vCp~~~~Ce~~C~~~~~~~~~v~I~~le~~~~~~~~~~~~~~~~~~~~~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~ 151 (456)
T 2vdc_G 72 ICPQDRLCEGNCVIEQSTHGAVTIGSVEKYINDTAWDQGWVKPRTPSRELGLSVGVIGAGPAGLAAAEELRAKGYEVHVY 151 (456)
T ss_dssp HCCGGGSGGGGCGGGGSSSCSCCHHHHHHHHHHHHHHHTCCCCCCSCSSCCCCEEEECCSHHHHHHHHHHHHHTCCEEEE
T ss_pred cCCCCcchHHhcccCCCCCCCccHHHHHHHHHHHHHHcCCCCCCCCcCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEE
Confidence 69999999999998865458899999999998766655554433333356789999999999999999999999999999
Q ss_pred ecCCCCCccee
Q 006176 187 EKYVIPGGSSG 197 (658)
Q Consensus 187 e~~~~~gg~~~ 197 (658)
|+.+.+||...
T Consensus 152 e~~~~~GG~l~ 162 (456)
T 2vdc_G 152 DRYDRMGGLLV 162 (456)
T ss_dssp CSSSSCSTHHH
T ss_pred eccCCCCCeee
Confidence 99999999654
No 64
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.16 E-value=2.5e-10 Score=127.75 Aligned_cols=64 Identities=19% Similarity=0.165 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEE--CCC-cEEEcCEEEECCChhHHHhhccC
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRL--SDG-REFYAKTIISNATRWDTFGKLLK 450 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~--~~G-~~i~ad~VV~a~g~~~~~~~Ll~ 450 (658)
..+.+.|.+.+++.|++|+++++|++|..+++.++ |++ .+| +++.||.||.|.|.++.+.+.++
T Consensus 148 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~-v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~lG 214 (570)
T 3fmw_A 148 SRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVE-VTVAGPSGPYPVRARYGVGCDGGRSTVRRLAA 214 (570)
T ss_dssp HHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEE-EEEEETTEEEEEEESEEEECSCSSCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEE-EEEEeCCCcEEEEeCEEEEcCCCCchHHHHcC
Confidence 36777788888888999999999999998877765 666 678 68999999999999988777775
No 65
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.15 E-value=8.6e-10 Score=123.67 Aligned_cols=58 Identities=19% Similarity=0.334 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeC-CEEEEEEEC--CCc--EEEcCEEEECCChhH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQ-GKAVGVRLS--DGR--EFYAKTIISNATRWD 443 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~-~~v~gV~~~--~G~--~i~ad~VV~a~g~~~ 443 (658)
..+.+.|.+.+++.|++|+++++|++|..++ +++++|++. +|+ ++.||.||+|+|.+.
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 4788999999999999999999999999887 888888775 664 589999999999764
No 66
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.14 E-value=7e-10 Score=117.09 Aligned_cols=40 Identities=33% Similarity=0.395 Sum_probs=35.9
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCc
Q 006176 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGG 194 (658)
Q Consensus 155 ~~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg 194 (658)
..++||+|||||++|+++|++|+++|++|+|+|+....+|
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 3468999999999999999999999999999999875554
No 67
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.13 E-value=5.3e-10 Score=123.63 Aligned_cols=58 Identities=21% Similarity=0.401 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
..+.+.|.+.+++.|++|+++++|++|..+++++++|++.+|+++.||.||+|+|.+.
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 4678889999999999999999999999998888899999999999999999999876
No 68
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.12 E-value=7.3e-10 Score=116.40 Aligned_cols=191 Identities=18% Similarity=0.148 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHHHhhccCCCCCChHHHHHHHhh
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLY 465 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~~Ll~~~~lp~~~~~~~~~~ 465 (658)
..+.++|.+.++++|++|+. ++|++|...+ .+.||.||+|+|.+. ..+++. +|-
T Consensus 142 ~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~------------~~~a~~VV~A~G~~s--~~l~~~--~~l--------- 195 (351)
T 3g3e_A 142 KNYLQWLTERLTERGVKFFQ-RKVESFEEVA------------REGADVIVNCTGVWA--GALQRD--PLL--------- 195 (351)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH------------HTTCSEEEECCGGGG--GGTSCC--TTC---------
T ss_pred HHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh------------cCCCCEEEECCCcCh--HhhcCC--Cce---------
Confidence 58999999999999999998 8998875321 267999999999987 345442 211
Q ss_pred ccCCceEEEEEeeecCcCCCCCCcceeeecchhhhhccCCCceEEeccCCCCCCCCCCCceEEEEEeccccchhcccChh
Q 006176 466 VKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWEGLAQK 545 (658)
Q Consensus 466 ~~~~s~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G~~~l~~~~~~~~~~w~~l~~~ 545 (658)
.. .-...+.++.+ ... + .++..+.. . .....+|+. |. + + .++ +-.......|...
T Consensus 196 ~p---~rg~~~~~~~~----~~~-~-~~~~~~~~-~-~~~~~~y~~-p~-------~-~-~~~-iGg~~~~~~~~~~--- 250 (351)
T 3g3e_A 196 QP---GRGQIMKVDAP----WMK-H-FILTHDPE-R-GIYNSPYII-PG-------T-Q-TVT-LGGIFQLGNWSEL--- 250 (351)
T ss_dssp EE---EEEEEEEEECT----TCC-S-EEEECCTT-T-CTTCSCEEE-EC-------S-S-CEE-EECCCEETCCCCS---
T ss_pred ee---cCCcEEEEeCC----Ccc-e-EEEecccc-C-CCCceeEEE-eC-------C-C-cEE-EeeeeecCCCCCC---
Confidence 11 11122333322 111 1 22211000 0 000112321 21 1 1 211 1111111122110
Q ss_pred hhHHHHHHHHHHHHHHHHHhhCCCCcCc-EEEEEecChhHHHHHhcCCCCcccCCCCCCCC--CCCCCCCCCCCCCcEEE
Q 006176 546 DYDAKKELVADEIINRLENKLFPGLKQS-IAFREIGSPKTHRRYLARDQGTYGPMPRGTPK--GLLGMPFNTTGINGLYC 622 (658)
Q Consensus 546 ~~~~~ke~~~~~il~~L~~~~~P~l~~~-i~~~~~~tP~~~~~~~~~~~G~yg~~p~~~~~--~~~~~p~~~t~i~gLyl 622 (658)
..++..+.+++.+. +++|.+.+. ++..+ .|.+...|+ .+. ..+++ ....+|+|+
T Consensus 251 ----~~~~~~~~l~~~~~-~~~P~l~~~~i~~~w--------------~G~r~~t~D-~p~~~~~ig~---~~~~~~~~~ 307 (351)
T 3g3e_A 251 ----NNIQDHNTIWEGCC-RLEPTLKNARIIGER--------------TGFRPVRPQ-IRLEREQLRT---GPSNTEVIH 307 (351)
T ss_dssp ----CCHHHHHHHHHHHH-HHCGGGGGCEEEEEE--------------EEEEEECSS-CEEEEEEECC---SSSCEEEEE
T ss_pred ----CCHHHHHHHHHHHH-HhCCCccCCcEeeee--------------EeeCCCCCC-ccceeeeccC---CCCCCeEEE
Confidence 11344567788888 899998753 33333 344444444 220 01121 123689999
Q ss_pred eCCCccCCCChhHHhhhHHHHHHHHHHHhc
Q 006176 623 VGDSCFPGQGVIAVAFSGVMCAHRVAADIG 652 (658)
Q Consensus 623 aG~~~~pG~Gv~ga~~sG~~aA~~Il~~lg 652 (658)
+..+ .|+|+..+..+|+.+|+.|.+.+.
T Consensus 308 ~~G~--~g~G~~~ap~~g~~la~li~~~~~ 335 (351)
T 3g3e_A 308 NYGH--GGYGLTIHWGCALEAAKLFGRILE 335 (351)
T ss_dssp EECC--TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCC--CcchHhhhHHHHHHHHHHHHHHHH
Confidence 8765 488999999999999999988765
No 69
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.11 E-value=9.8e-10 Score=123.03 Aligned_cols=59 Identities=22% Similarity=0.344 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEEC---CCc--EEEcCEEEECCChhHH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLS---DGR--EFYAKTIISNATRWDT 444 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~---~G~--~i~ad~VV~a~g~~~~ 444 (658)
..++..+.+.++++|++|+.+++|++|..+++++++|++. +|+ ++.||.||+|+|+|..
T Consensus 188 ~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~ 251 (571)
T 2rgh_A 188 ARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVD 251 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHH
T ss_pred HHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHH
Confidence 4788889999999999999999999999999888888864 343 6899999999999973
No 70
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.11 E-value=4e-10 Score=120.59 Aligned_cols=58 Identities=17% Similarity=0.257 Sum_probs=49.0
Q ss_pred ChHHHHHHHHHHHHHcCcEEEeCceeeEEEEe----CCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 384 GVGGIAKSLAKGLADKGSEILYKANVTKVILE----QGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 384 G~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~----~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
....+.+.|.+.+++.|++|+++++|++|..+ ++++ .|++.+| ++.||.||+|+|.+.
T Consensus 107 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~-~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRF-VLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCE-EEEETTE-EEEESEEEECCCCSS
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeE-EEEECCC-EEECCEEEECCCCcc
Confidence 34578888999999999999999999999876 5554 5777777 799999999999765
No 71
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.05 E-value=8.3e-09 Score=110.32 Aligned_cols=52 Identities=8% Similarity=0.097 Sum_probs=42.2
Q ss_pred CcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHHHhhccCC
Q 006176 400 GSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKG 451 (658)
Q Consensus 400 G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~~Ll~~ 451 (658)
+.+|+++++|+++...++..+.|++.||++++||.||-|-|..+.+.+.+..
T Consensus 123 ~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR~~l~~ 174 (412)
T 4hb9_A 123 ANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSNSKVRKQYLP 174 (412)
T ss_dssp TTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTTCHHHHHHST
T ss_pred cceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCCcchHHHhCC
Confidence 5679999999999875543334889999999999999999998887766543
No 72
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.03 E-value=1.3e-09 Score=116.48 Aligned_cols=66 Identities=17% Similarity=0.314 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHc-CcEEEeCceeeEEEEeCCEEE-EEEECCCcEEEcCEEEECCChhHHHhhccCC
Q 006176 386 GGIAKSLAKGLADK-GSEILYKANVTKVILEQGKAV-GVRLSDGREFYAKTIISNATRWDTFGKLLKG 451 (658)
Q Consensus 386 ~~l~~~L~~~l~~~-G~~I~~~~~V~~I~~~~~~v~-gV~~~~G~~i~ad~VV~a~g~~~~~~~Ll~~ 451 (658)
..+.+.|.+.+++. |++|+++++|++|..++++++ .|++.+|+++.+|.||.|.|.+..+.+.++.
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg~ 174 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLLD 174 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCHHHHHTSC
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCChHHHHHhCC
Confidence 36777888889888 999999999999998887763 5888899889999999999998877776653
No 73
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.01 E-value=4.8e-09 Score=112.19 Aligned_cols=61 Identities=16% Similarity=0.082 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHHHhhccC
Q 006176 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLK 450 (658)
Q Consensus 387 ~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~~Ll~ 450 (658)
.+.+.|.+.+ .|++|+++++|++|..++++++ |++.+|+++.+|.||.|.|.++...+.+.
T Consensus 100 ~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~-v~~~~g~~~~ad~vV~AdG~~S~vr~~~~ 160 (397)
T 2vou_A 100 SIYGGLYELF--GPERYHTSKCLVGLSQDSETVQ-MRFSDGTKAEANWVIGADGGASVVRKRLL 160 (397)
T ss_dssp HHHHHHHHHH--CSTTEETTCCEEEEEECSSCEE-EEETTSCEEEESEEEECCCTTCHHHHHHH
T ss_pred HHHHHHHHhC--CCcEEEcCCEEEEEEecCCEEE-EEECCCCEEECCEEEECCCcchhHHHHhc
Confidence 3344454444 4899999999999998877765 88899989999999999999887766654
No 74
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.01 E-value=4.7e-09 Score=117.83 Aligned_cols=59 Identities=14% Similarity=0.179 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEe-CCEEEEEEE---CCCc--EEEcCEEEECCChhHH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILE-QGKAVGVRL---SDGR--EFYAKTIISNATRWDT 444 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~-~~~v~gV~~---~~G~--~i~ad~VV~a~g~~~~ 444 (658)
..+.+.|.+.+++.|++|+++++|++|..+ ++++++|.+ .+|+ ++.|+.||+|+|.+..
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGR 207 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCcc
Confidence 578889999999999999999999999986 788888875 4565 5889999999998763
No 75
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.01 E-value=3.2e-09 Score=116.98 Aligned_cols=63 Identities=11% Similarity=0.059 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCc---EEEcCEEEECCChhHHHhhccC
Q 006176 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGR---EFYAKTIISNATRWDTFGKLLK 450 (658)
Q Consensus 387 ~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~---~i~ad~VV~a~g~~~~~~~Ll~ 450 (658)
.+.+.|.+.+++.|++|+++++|++|..+++.++ |++.+++ ++.||.||.|.|.++.+.+.++
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 172 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDGAGVT-VEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAG 172 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEE-EEEEETTEEEEEEESEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEE-EEEEcCCCCEEEEeCEEEECCCcchHHHHHcC
Confidence 5666788888889999999999999999888776 7777765 7999999999999988877775
No 76
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.00 E-value=6.1e-09 Score=110.56 Aligned_cols=61 Identities=13% Similarity=0.100 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHHHhhccCC
Q 006176 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLKG 451 (658)
Q Consensus 387 ~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~~Ll~~ 451 (658)
.+.+.|.+.+.+.|++|+++++|++|.. ++ .|++.+|+++.+|.||.|.|.+....+.+..
T Consensus 108 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~~---~v~~~~g~~~~ad~vV~AdG~~s~vr~~l~~ 168 (379)
T 3alj_A 108 HLHDALVNRARALGVDISVNSEAVAADP-VG---RLTLQTGEVLEADLIVGADGVGSKVRDSIGF 168 (379)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEET-TT---EEEETTSCEEECSEEEECCCTTCHHHHHHCC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEe-CC---EEEECCCCEEEcCEEEECCCccHHHHHHhcC
Confidence 6677788888889999999999999987 44 4778889899999999999998877766653
No 77
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.99 E-value=3.4e-09 Score=116.71 Aligned_cols=63 Identities=16% Similarity=0.156 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCc---EEEcCEEEECCChhHHHhhccC
Q 006176 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGR---EFYAKTIISNATRWDTFGKLLK 450 (658)
Q Consensus 387 ~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~---~i~ad~VV~a~g~~~~~~~Ll~ 450 (658)
.+.+.|.+.+++.|++|+++++|++|..+++.++ |++.+++ ++.||.||.|.|.++.+.+.++
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 173 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEGDHVV-VEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAG 173 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEE-EEEECSSCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEE-EEEEcCCCcEEEEeCEEEEccCcccHHHHHcC
Confidence 5667788888889999999999999998887776 7777765 7999999999999988877775
No 78
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.99 E-value=2.6e-09 Score=117.86 Aligned_cols=58 Identities=19% Similarity=0.295 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEE---CCCc--EEEcCEEEECCChhHH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRL---SDGR--EFYAKTIISNATRWDT 444 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~---~~G~--~i~ad~VV~a~g~~~~ 444 (658)
..++..|.+.++++|++|+++++|++|..++ ++++|++ .+|+ ++.||.||+|+|+|..
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARREN-GLWIVEAEDIDTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEET-TEEEEEEEETTTCCEEEEEESCEEECCGGGHH
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC-CEEEEEEEECCCCCEEEEECCEEEECCChhHH
Confidence 5889999999999999999999999999877 4567877 3575 6899999999999974
No 79
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.97 E-value=3.5e-09 Score=107.79 Aligned_cols=57 Identities=12% Similarity=0.157 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHH-cCcEEEeCceeeEEEEeCCEEEEEEEC---------CC-----cEEEcCEEEECCChhH
Q 006176 387 GIAKSLAKGLAD-KGSEILYKANVTKVILEQGKAVGVRLS---------DG-----REFYAKTIISNATRWD 443 (658)
Q Consensus 387 ~l~~~L~~~l~~-~G~~I~~~~~V~~I~~~~~~v~gV~~~---------~G-----~~i~ad~VV~a~g~~~ 443 (658)
.+...|.+.+.+ .|++++++++|++|..+++++.+|++. +| .++.||.||+|+|...
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s 191 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDG 191 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSS
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCch
Confidence 455667777765 699999999999999998888888763 32 5689999999999643
No 80
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.96 E-value=2.6e-10 Score=125.63 Aligned_cols=86 Identities=20% Similarity=0.126 Sum_probs=56.6
Q ss_pred CCCC-CCCCCCcccccccccccccccccccccccchhhhcC--------CCCC-CCCCCCCccEEEECCChhHHHHHHHH
Q 006176 107 NFNG-STLRSEDLGCGESERNRDFALMAKTVMSVDNLVEIG--------GNEG-MSRGADDYDAIVIGSGIGGLVAATQL 176 (658)
Q Consensus 107 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~-~~~~~~~~~~~iiG~g~~g~~~a~~l 176 (658)
.||. +.+|+..|...+ ..++.+...+..++........ ..+. .......+||+|||||++||++|..|
T Consensus 34 vc~~~~~l~~~~g~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~L 111 (497)
T 2bry_A 34 VLSSFQGLCRALGVESG--GGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVEL 111 (497)
T ss_dssp HHHHHHHHHHHHTCCTT--CHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCC--CCcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHH
Confidence 4665 567887775532 2445555555554443211100 0111 11234578999999999999999999
Q ss_pred HHcCCeEEEEecCCCCCc
Q 006176 177 AVKGARVLVLEKYVIPGG 194 (658)
Q Consensus 177 ~~~g~~v~~~e~~~~~gg 194 (658)
++.|++|+|+|+.+.+|+
T Consensus 112 a~~G~~V~liEk~~~~g~ 129 (497)
T 2bry_A 112 ALLGARVVLVEKRIKFSR 129 (497)
T ss_dssp HHTTCEEEEEESCSSCCC
T ss_pred HHCCCeEEEEEeccccCC
Confidence 999999999999887754
No 81
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.95 E-value=1.2e-08 Score=115.62 Aligned_cols=59 Identities=17% Similarity=0.244 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEE---CCCc--EEEcCEEEECCChhHH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRL---SDGR--EFYAKTIISNATRWDT 444 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~---~~G~--~i~ad~VV~a~g~~~~ 444 (658)
..+...|.+.+.+.|++|+.++.|++|..+++++.+|.+ .+|+ .+.||.||+|+|.+..
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 221 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGR 221 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchh
Confidence 478899999999999999999999999998899888876 4676 4899999999998763
No 82
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.93 E-value=1e-08 Score=115.02 Aligned_cols=62 Identities=19% Similarity=0.302 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeC-CEEEEEEECC------C---------cEEEcCEEEECCChhHHHhh
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQ-GKAVGVRLSD------G---------REFYAKTIISNATRWDTFGK 447 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~-~~v~gV~~~~------G---------~~i~ad~VV~a~g~~~~~~~ 447 (658)
..+.+.|.+.+++.|++|+++++|++|..++ +++++|++.+ | .++.||.||.|.|.+..+.+
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~ 221 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAK 221 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHHH
Confidence 4777889999999999999999999999876 5687888763 3 57999999999998875543
No 83
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.93 E-value=6.5e-09 Score=116.95 Aligned_cols=59 Identities=17% Similarity=0.251 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEE---CCCc--EEEcCEEEECCChhHH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRL---SDGR--EFYAKTIISNATRWDT 444 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~---~~G~--~i~ad~VV~a~g~~~~ 444 (658)
..+...|.+.+.+.|++|+.++.|++|..+++++.+|.+ .+|+ .+.|+.||+|+|.+..
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 218 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGR 218 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCcccc
Confidence 478889999999999999999999999999999988876 4675 5889999999998763
No 84
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.90 E-value=6.2e-09 Score=108.90 Aligned_cols=56 Identities=18% Similarity=0.182 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 387 ~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
.+.+.+.+.+++.|++++++++|++|..+++.+.+|++.+| ++.+|.||+|+|.+.
T Consensus 77 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 77 EVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGG
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCC
Confidence 45556777788889999999999999998887655878777 799999999999765
No 85
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.89 E-value=9.5e-09 Score=105.56 Aligned_cols=41 Identities=39% Similarity=0.613 Sum_probs=37.1
Q ss_pred CCccEEEECCChhHHHHHHHHHHc--CCeEEEEecCCCCCcce
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVK--GARVLVLEKYVIPGGSS 196 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~--g~~v~~~e~~~~~gg~~ 196 (658)
..+||+|||+|++||++|+.|+++ |++|+|+|+...+||.+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 357999999999999999999999 99999999999888743
No 86
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.88 E-value=3.5e-09 Score=113.54 Aligned_cols=56 Identities=18% Similarity=0.184 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceee---------EEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVT---------KVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~---------~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
..+.+.|.+.+++.|++|+++++|+ +|..+++++ +|++.+| ++.||.||+|+|.++
T Consensus 172 ~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v-~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 172 GSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQ-IVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC--------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeE-EEEECCc-EEECCEEEECCCccH
Confidence 5788999999999999999999999 888777776 6877777 799999999999986
No 87
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.88 E-value=7.1e-09 Score=110.88 Aligned_cols=61 Identities=10% Similarity=0.134 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHHHhhccC
Q 006176 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLLK 450 (658)
Q Consensus 387 ~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~~Ll~ 450 (658)
.+.+.|.+.+. +++|+++++|++|..++++++ |++.+|+++.||.||.|.|.++...+.+.
T Consensus 129 ~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~-v~~~~g~~~~ad~vV~AdG~~S~vR~~l~ 189 (398)
T 2xdo_A 129 DLRAILLNSLE--NDTVIWDRKLVMLEPGKKKWT-LTFENKPSETADLVILANGGMSKVRKFVT 189 (398)
T ss_dssp HHHHHHHHTSC--TTSEEESCCEEEEEECSSSEE-EEETTSCCEEESEEEECSCTTCSCCTTTC
T ss_pred HHHHHHHhhcC--CCEEEECCEEEEEEECCCEEE-EEECCCcEEecCEEEECCCcchhHHhhcc
Confidence 44555555553 368999999999998877665 88899988999999999998876666554
No 88
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.88 E-value=9.2e-09 Score=114.45 Aligned_cols=42 Identities=33% Similarity=0.499 Sum_probs=39.2
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCccee
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (658)
..+||+|||||++|+++|+.|++.|++|+|+|+.+.+||.+.
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~ 61 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWY 61 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 468999999999999999999999999999999999998665
No 89
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.87 E-value=2e-08 Score=103.74 Aligned_cols=40 Identities=35% Similarity=0.608 Sum_probs=36.7
Q ss_pred CccEEEECCChhHHHHHHHHHHc--CCeEEEEecCCCCCcce
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVK--GARVLVLEKYVIPGGSS 196 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~--g~~v~~~e~~~~~gg~~ 196 (658)
.+||+|||||++||++|+.|+++ |++|+|+|+...+||.+
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~ 120 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGA 120 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCcc
Confidence 58999999999999999999997 99999999998887643
No 90
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.87 E-value=6.6e-09 Score=115.39 Aligned_cols=57 Identities=14% Similarity=0.147 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHcCc--EEEeCceeeEEEEeCC-EEEEEEECCCcEEEcCEEEECCChhH
Q 006176 387 GIAKSLAKGLADKGS--EILYKANVTKVILEQG-KAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 387 ~l~~~L~~~l~~~G~--~I~~~~~V~~I~~~~~-~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
.+.+.+.+.+++.|+ +|+++++|+++..+++ ....|++.+|+++.||.||+|+|...
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s 147 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLS 147 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCC
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccc
Confidence 444556666777787 8999999999998765 23458899999999999999999644
No 91
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.86 E-value=1e-08 Score=113.90 Aligned_cols=56 Identities=20% Similarity=0.309 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHH-cCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 387 GIAKSLAKGLAD-KGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 387 ~l~~~L~~~l~~-~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
.+.+.|.+.+++ .|++| ++++|++|..+++++++|.+.+|.++.||.||+|+|.+.
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCB
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCc
Confidence 567778888888 59999 578999999999999999999999999999999999764
No 92
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.86 E-value=9.7e-09 Score=109.53 Aligned_cols=64 Identities=16% Similarity=0.173 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEE-CCCc--EEEcCEEEECCChhHHHhhccC
Q 006176 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRL-SDGR--EFYAKTIISNATRWDTFGKLLK 450 (658)
Q Consensus 387 ~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~-~~G~--~i~ad~VV~a~g~~~~~~~Ll~ 450 (658)
.+.+.|.+.+.+.|++|+++++|++|..+++..+.|++ .+|+ ++.||.||.|.|.++.+.+.++
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l~ 170 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGISRQSIP 170 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTCSTGGGSC
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCcHHHHhcC
Confidence 55667888888889999999999999876432224666 6887 6999999999999887766664
No 93
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.86 E-value=9.7e-09 Score=114.10 Aligned_cols=58 Identities=14% Similarity=0.210 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHH-cCcEEEeCceeeEEEE-eCC------EEEEEEEC---CCc--EEEcCEEEECCChhHH
Q 006176 387 GIAKSLAKGLAD-KGSEILYKANVTKVIL-EQG------KAVGVRLS---DGR--EFYAKTIISNATRWDT 444 (658)
Q Consensus 387 ~l~~~L~~~l~~-~G~~I~~~~~V~~I~~-~~~------~v~gV~~~---~G~--~i~ad~VV~a~g~~~~ 444 (658)
.+.+.|.+.+++ .|++|+++++|++|.. +++ ++.+|.+. +|+ ++.|+.||+|+|.+..
T Consensus 139 ~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 209 (540)
T 1chu_A 139 EVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASK 209 (540)
T ss_dssp ---CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGG
T ss_pred HHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCccc
Confidence 567778888888 6999999999999998 545 88888774 565 6899999999998764
No 94
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.85 E-value=1.4e-08 Score=108.98 Aligned_cols=62 Identities=11% Similarity=0.125 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHH-cC-cEEEeCceeeEEEEeCCEEEEEEECC---C--cEEEcCEEEECCChhHHHhhccC
Q 006176 387 GIAKSLAKGLAD-KG-SEILYKANVTKVILEQGKAVGVRLSD---G--REFYAKTIISNATRWDTFGKLLK 450 (658)
Q Consensus 387 ~l~~~L~~~l~~-~G-~~I~~~~~V~~I~~~~~~v~gV~~~~---G--~~i~ad~VV~a~g~~~~~~~Ll~ 450 (658)
.+.+.|.+.+.+ .| ++|+++++|++|.. ++.++ |++.+ | +++.||.||.|.|.++...+.+.
T Consensus 108 ~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~-v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l~ 176 (410)
T 3c96_A 108 ELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRV-LIGARDGHGKPQALGADVLVGADGIHSAVRAHLH 176 (410)
T ss_dssp HHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEE-EEEEEETTSCEEEEEESEEEECCCTTCHHHHHHC
T ss_pred HHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccE-EEEecCCCCCceEEecCEEEECCCccchhHHHhc
Confidence 566677777776 36 58999999999988 55554 66654 7 47899999999999888777664
No 95
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.85 E-value=1.2e-09 Score=130.51 Aligned_cols=90 Identities=18% Similarity=0.004 Sum_probs=72.9
Q ss_pred CCCCCCCCCCcccccccccccccccccccccccchhhhcCCCCCCC--------CCCCCccEEEECCChhHHHHHHHHHH
Q 006176 107 NFNGSTLRSEDLGCGESERNRDFALMAKTVMSVDNLVEIGGNEGMS--------RGADDYDAIVIGSGIGGLVAATQLAV 178 (658)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~iiG~g~~g~~~a~~l~~ 178 (658)
.||++.+||+.|+++.....++.|..+++++.+............+ .....+||+|||||++||+||.+|++
T Consensus 129 vCp~~~~Ce~~C~~~~~~~~pv~I~~le~~~~d~~~~~~~~~~~~p~~~~~~~~~~~~~~~VvVIGgGpAGl~aA~~L~~ 208 (1025)
T 1gte_A 129 VCPTSDLCVGGCNLYATEEGSINIGGLQQFASEVFKAMNIPQIRNPCLPSQEKMPEAYSAKIALLGAGPASISCASFLAR 208 (1025)
T ss_dssp HCCGGGSGGGGCGGGGSTTCCCCHHHHHHHHHHHHHHHTCCCCCCTTSCCGGGSCGGGGCCEEEECCSHHHHHHHHHHHH
T ss_pred CCCChhhHHhhCccCCCCCCCccHhHHHHHHHHHHHHhCCccccCccccccccCCccCCCEEEEECccHHHHHHHHHHHh
Confidence 7999999999999987556799999999999887544333221111 11346899999999999999999999
Q ss_pred cCC-eEEEEecCCCCCcce
Q 006176 179 KGA-RVLVLEKYVIPGGSS 196 (658)
Q Consensus 179 ~g~-~v~~~e~~~~~gg~~ 196 (658)
.|+ +|+|+|+.+.+||..
T Consensus 209 ~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 209 LGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp TTCCCEEEEESSSSCSTHH
T ss_pred cCCCcEEEEeCCCCCCccc
Confidence 999 799999999999965
No 96
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.84 E-value=5.8e-08 Score=109.19 Aligned_cols=60 Identities=10% Similarity=0.123 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHcC-cEEEeCceeeEEEEeCCEEEEEEE---CCCc--EEEcCEEEECCChhHHH
Q 006176 386 GGIAKSLAKGLADKG-SEILYKANVTKVILEQGKAVGVRL---SDGR--EFYAKTIISNATRWDTF 445 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G-~~I~~~~~V~~I~~~~~~v~gV~~---~~G~--~i~ad~VV~a~g~~~~~ 445 (658)
..+...|.+.+++.| ++|+++++|++|..+++++.+|.. .+|+ ++.|+.||+|+|.+...
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRV 199 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCccc
Confidence 478888999998889 999999999999999998888764 5676 68999999999987643
No 97
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.84 E-value=1.5e-08 Score=104.19 Aligned_cols=39 Identities=23% Similarity=0.325 Sum_probs=34.1
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCc
Q 006176 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGG 194 (658)
Q Consensus 155 ~~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg 194 (658)
+++|||+|||||++||+||.+|+|+|++|+|+|+.. +||
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg 42 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRN 42 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGG
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCC
Confidence 457999999999999999999999999999999864 455
No 98
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.82 E-value=2.2e-08 Score=98.68 Aligned_cols=56 Identities=18% Similarity=0.223 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHc-CcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 387 GIAKSLAKGLADK-GSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 387 ~l~~~L~~~l~~~-G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
.+.+.|.+.+++. |++++ +++|++|..+++++++|++.+|+++.||.||+|+|.+.
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFL 125 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCS
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 4555677888887 99998 57999999988888889999998899999999999753
No 99
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.81 E-value=1.9e-08 Score=104.58 Aligned_cols=52 Identities=21% Similarity=0.125 Sum_probs=42.1
Q ss_pred HHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChh
Q 006176 390 KSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 390 ~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
+.+.+.+++.|++++++++|++|..+++.+ .|.+.+|+++.+|.||+|+|..
T Consensus 69 ~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~-~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 69 KGLVEQVAPFNPVYSLGERAETLEREGDLF-KVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHHHHGGGCCEEEESCCEEEEEEETTEE-EEEETTSCEEEEEEEEECCTTS
T ss_pred HHHHHHHHHcCCEEEeCCEEEEEEECCCEE-EEEECCCCEEEeCEEEECCCCC
Confidence 335555666789999999999999887754 3778888889999999999964
No 100
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.79 E-value=2.1e-08 Score=111.87 Aligned_cols=57 Identities=19% Similarity=0.313 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHH-cCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHH
Q 006176 387 GIAKSLAKGLAD-KGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDT 444 (658)
Q Consensus 387 ~l~~~L~~~l~~-~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~ 444 (658)
.+.+.|.+.+++ .|++| ++++|++|..+++++++|.+.+|.++.||.||+|+|.+..
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 566778888888 69999 5789999999888998999999988999999999998753
No 101
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.79 E-value=1.2e-07 Score=104.09 Aligned_cols=56 Identities=23% Similarity=0.360 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChh
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
..+.+.+.+.+++.|++|+++++|++|..+++++ .|++.+|+++.+|.||+|+|..
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v-~v~~~~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQSTENCY-NVVLTNGQTICADRVMLATGRV 287 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSE-EEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEE-EEEECCCcEEEcCEEEEeeCCC
Confidence 3677778889999999999999999999877776 5889999899999999999964
No 102
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.78 E-value=1e-07 Score=104.14 Aligned_cols=58 Identities=17% Similarity=0.182 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECC-CcEEEcCEEEECCChhHH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSD-GREFYAKTIISNATRWDT 444 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~-G~~i~ad~VV~a~g~~~~ 444 (658)
..+.+.|.+.+++.|++|+.+++| +|..+++++.+|.+.+ +.++.+|.||+|+|.+..
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcc
Confidence 477888998888889999999999 9998989988887642 235789999999998764
No 103
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.78 E-value=2.1e-08 Score=105.60 Aligned_cols=54 Identities=15% Similarity=0.167 Sum_probs=42.7
Q ss_pred HHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChh
Q 006176 389 AKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 389 ~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
.+.+.+.+++.|++++++++|++|..+++....|++.+|+++.+|.||+|+|..
T Consensus 77 ~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 77 VESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp HHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCC
Confidence 334556667778999999999999987652334788888889999999999964
No 104
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.78 E-value=1.3e-07 Score=107.22 Aligned_cols=57 Identities=14% Similarity=0.168 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHc-Cc-EEEeCceeeEEEEeCC---EEEEEEE---CCCc--EEEcCEEEECCChhH
Q 006176 387 GIAKSLAKGLADK-GS-EILYKANVTKVILEQG---KAVGVRL---SDGR--EFYAKTIISNATRWD 443 (658)
Q Consensus 387 ~l~~~L~~~l~~~-G~-~I~~~~~V~~I~~~~~---~v~gV~~---~~G~--~i~ad~VV~a~g~~~ 443 (658)
.+...|.+.+++. |+ +|+.+++|++|..+++ +++||.. .+|+ .+.|+.||+|+|.+.
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 4566677777777 99 9999999999998877 8988875 4665 589999999999775
No 105
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.77 E-value=1.5e-07 Score=101.05 Aligned_cols=58 Identities=17% Similarity=0.166 Sum_probs=52.8
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChh
Q 006176 385 VGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 385 ~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
...+.+.+.+.++++|++|+++++|++|..+++++.+|++.+|+++.+|.||+|+|..
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~ 250 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIV 250 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCc
Confidence 3578888999999999999999999999988888888999999999999999999954
No 106
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.76 E-value=3.9e-08 Score=109.49 Aligned_cols=43 Identities=33% Similarity=0.428 Sum_probs=39.4
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCccee
Q 006176 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (658)
Q Consensus 155 ~~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (658)
+..+||+|||||++|+++|+.|++.|++|+|+|+.+.+||.+.
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~ 56 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWY 56 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 3468999999999999999999999999999999999998664
No 107
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.76 E-value=4.1e-08 Score=109.47 Aligned_cols=56 Identities=20% Similarity=0.245 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHc-CcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 387 GIAKSLAKGLADK-GSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 387 ~l~~~L~~~l~~~-G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
.+...|.+.+++. |++|+ +..|+.|..+++++.+|.+.+|+++.||.||+|+|.+.
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 5667788888874 99995 56899999999999999999999999999999999764
No 108
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.75 E-value=3.6e-08 Score=101.60 Aligned_cols=51 Identities=22% Similarity=0.183 Sum_probs=40.4
Q ss_pred HHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChh
Q 006176 390 KSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 390 ~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
+.+.+.+++.|+++++ ++|++|..+++.+. |++.+|+++.+|.||+|+|..
T Consensus 74 ~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~-v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 74 KVFNKHIEKYEVPVLL-DIVEKIENRGDEFV-VKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHTTTCCEEE-SCEEEEEEC--CEE-EEESSSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHcCCEEEE-EEEEEEEecCCEEE-EEECCCCEEEcCEEEECcCCC
Confidence 3355666777999999 89999988776654 888888899999999999975
No 109
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.74 E-value=1.8e-08 Score=112.04 Aligned_cols=42 Identities=33% Similarity=0.436 Sum_probs=38.9
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCccee
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (658)
..+||+|||||++|+++|+.|++.|++|+|+|+.+.+||...
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~ 49 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWY 49 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 468999999999999999999999999999999999998654
No 110
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.74 E-value=2.2e-08 Score=103.76 Aligned_cols=53 Identities=19% Similarity=0.240 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCCh
Q 006176 388 IAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATR 441 (658)
Q Consensus 388 l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~ 441 (658)
+.+.+.+.+++.|++++++++|++|..+++....|++.+|+ +.+|.||+|+|.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 69 LINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGN 121 (332)
T ss_dssp HHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTT
T ss_pred HHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCC
Confidence 33445666677799999999999999887633448888886 999999999997
No 111
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.72 E-value=3.8e-07 Score=97.56 Aligned_cols=58 Identities=19% Similarity=0.283 Sum_probs=53.4
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChh
Q 006176 385 VGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 385 ~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
...+.+.+.+.++++|++++++++|++|..+++++.+|++.+|+++.+|.||+|+|..
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~ 240 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVI 240 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEE
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCc
Confidence 4678888999999999999999999999988889989999999999999999999954
No 112
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.70 E-value=1.5e-07 Score=88.55 Aligned_cols=54 Identities=17% Similarity=0.074 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 387 ~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
.+.+.+.+.+++.|++++++ +|++|..+++.+ .|++.+| ++.+|.||+|+|...
T Consensus 57 ~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~-~v~~~~g-~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 57 ELLRRLEAHARRYGAEVRPG-VVKGVRDMGGVF-EVETEEG-VEKAERLLLCTHKDP 110 (180)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CCCEEEECSSSE-EEECSSC-EEEEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEE-EEEECCC-EEEECEEEECCCCCC
Confidence 34445667788889999999 999998876654 4778888 799999999999764
No 113
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.69 E-value=7.7e-08 Score=106.38 Aligned_cols=59 Identities=15% Similarity=0.177 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEe-CCEEEEEEECCCcEEEcCEEEECCChhHHH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILE-QGKAVGVRLSDGREFYAKTIISNATRWDTF 445 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~-~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~ 445 (658)
..+.+.|.+.+++.|++++.+ +|++|..+ ++.+++|++.+|+++.||.||.|+|.++..
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 367788889998999999999 99999874 455677889999889999999999988754
No 114
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.65 E-value=1.1e-07 Score=105.88 Aligned_cols=59 Identities=19% Similarity=0.218 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeC-CEEEEEEECCCcEEEcCEEEECCChhHHH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQ-GKAVGVRLSDGREFYAKTIISNATRWDTF 445 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~-~~v~gV~~~~G~~i~ad~VV~a~g~~~~~ 445 (658)
..+.+.|.+.+++.|++++.+ +|++|..++ +.+++|++.+|+++.||.||.|+|.+..+
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhh
Confidence 578889999999999999999 899998754 45667888899889999999999987654
No 115
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.65 E-value=9.4e-08 Score=99.16 Aligned_cols=53 Identities=19% Similarity=0.194 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEE---CCCcEEEcCEEEECCChh
Q 006176 388 IAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRL---SDGREFYAKTIISNATRW 442 (658)
Q Consensus 388 l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~---~~G~~i~ad~VV~a~g~~ 442 (658)
+.+.+.+.+++.|+++++++ |++|..+++.+. +.+ .++.++.+|.||+|+|..
T Consensus 86 ~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~-v~~~~~~~~~~~~~d~vvlAtG~~ 141 (338)
T 3itj_A 86 LMDRMREQSTKFGTEIITET-VSKVDLSSKPFK-LWTEFNEDAEPVTTDAIILATGAS 141 (338)
T ss_dssp HHHHHHHHHHHTTCEEECSC-EEEEECSSSSEE-EEETTCSSSCCEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEE-EEEEecCCCcEEEeCEEEECcCCC
Confidence 33445666777899999998 999988877664 656 367789999999999974
No 116
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.65 E-value=1.3e-07 Score=105.43 Aligned_cols=60 Identities=15% Similarity=0.215 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECC---C--cEEEcCEEEECCChhHHHhhccC
Q 006176 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSD---G--REFYAKTIISNATRWDTFGKLLK 450 (658)
Q Consensus 387 ~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~---G--~~i~ad~VV~a~g~~~~~~~Ll~ 450 (658)
.+.+.|.+.+++. |+++++|++|..++++++ |++.+ | +++.||.||.|.|.++.+.+.++
T Consensus 139 ~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~-v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 203 (549)
T 2r0c_A 139 WLAPLLAEAVGER---LRTRSRLDSFEQRDDHVR-ATITDLRTGATRAVHARYLVACDGASSPTRKALG 203 (549)
T ss_dssp HHHHHHHHHHGGG---EECSEEEEEEEECSSCEE-EEEEETTTCCEEEEEEEEEEECCCTTCHHHHHHT
T ss_pred HHHHHHHHHHHHh---cccCcEEEEEEEeCCEEE-EEEEECCCCCEEEEEeCEEEECCCCCcHHHHHcC
Confidence 4556677777765 999999999998887765 65554 6 46899999999999988777775
No 117
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.65 E-value=3.8e-07 Score=99.44 Aligned_cols=57 Identities=16% Similarity=0.253 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEE-ECCCcEEEcCEEEECCChhH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVR-LSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~-~~~G~~i~ad~VV~a~g~~~ 443 (658)
..+.+.+.+.++++|++|+++++|++|..++++...|+ +.+|+ +.+|.||+|+|...
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMP 268 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCccc
Confidence 47788899999999999999999999998765544688 88887 99999999999653
No 118
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.63 E-value=1.9e-07 Score=104.05 Aligned_cols=58 Identities=22% Similarity=0.245 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHc-CcEEEeCceeeEEEEe-CCEEEEEEECCCcEEEcCEEEECCChhHHH
Q 006176 387 GIAKSLAKGLADK-GSEILYKANVTKVILE-QGKAVGVRLSDGREFYAKTIISNATRWDTF 445 (658)
Q Consensus 387 ~l~~~L~~~l~~~-G~~I~~~~~V~~I~~~-~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~ 445 (658)
.+.+.|.+.+++. |++++++ +|++|..+ ++.+++|++.+|+++.||.||.|+|.+..+
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLL 254 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhh
Confidence 6788899999998 9999999 99999875 456677989999889999999999987753
No 119
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.63 E-value=2.3e-07 Score=100.65 Aligned_cols=42 Identities=33% Similarity=0.465 Sum_probs=38.6
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC--eEEEEecCCCCCccee
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYVIPGGSSG 197 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~--~v~~~e~~~~~gg~~~ 197 (658)
..+||+|||||++||++|..|++.|. +|+|||+.+.+||...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~ 48 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWN 48 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeec
Confidence 45899999999999999999999999 9999999998988654
No 120
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.62 E-value=6.7e-08 Score=99.20 Aligned_cols=48 Identities=21% Similarity=0.272 Sum_probs=40.8
Q ss_pred HHHHHcCcEEEeCceeeEEEEeCCEEEEEEEC--CCc--EEEcCEEEECCCh
Q 006176 394 KGLADKGSEILYKANVTKVILEQGKAVGVRLS--DGR--EFYAKTIISNATR 441 (658)
Q Consensus 394 ~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~--~G~--~i~ad~VV~a~g~ 441 (658)
+.+++.|++++++++|++|..+++++.+|++. +|+ ++.+|.||+|+|.
T Consensus 191 ~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 191 KVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp HHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCE
T ss_pred HHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcC
Confidence 44467899999999999999888888778776 786 7899999999984
No 121
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.62 E-value=4.3e-07 Score=102.81 Aligned_cols=57 Identities=12% Similarity=0.172 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHc--CcEEEeCceeeEEEEeCC---EEEEEEE---CCCc--EEEcCEEEECCChhH
Q 006176 387 GIAKSLAKGLADK--GSEILYKANVTKVILEQG---KAVGVRL---SDGR--EFYAKTIISNATRWD 443 (658)
Q Consensus 387 ~l~~~L~~~l~~~--G~~I~~~~~V~~I~~~~~---~v~gV~~---~~G~--~i~ad~VV~a~g~~~ 443 (658)
.+...|.+.++++ |++|+.++.|++|..+++ ++.||.. .+|+ .+.|+.||+|+|...
T Consensus 167 ~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 167 SYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp SHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccc
Confidence 5677788888887 999999999999999877 8998865 3454 588999999999765
No 122
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.61 E-value=3.6e-07 Score=93.74 Aligned_cols=50 Identities=20% Similarity=0.183 Sum_probs=40.2
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 392 LAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 392 L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
+.+.+.+.|+++++ ++|++|..+++.+. |++.+|+++.+|.||+|+|...
T Consensus 65 l~~~~~~~~v~~~~-~~v~~i~~~~~~~~-v~~~~g~~~~~~~vv~AtG~~~ 114 (311)
T 2q0l_A 65 WQEQCFRFGLKHEM-TAVQRVSKKDSHFV-ILAEDGKTFEAKSVIIATGGSP 114 (311)
T ss_dssp HHHHHHTTSCEEEC-SCEEEEEEETTEEE-EEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHcCCEEEE-EEEEEEEEcCCEEE-EEEcCCCEEECCEEEECCCCCC
Confidence 44556677899988 78999998877654 7778888899999999999643
No 123
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.59 E-value=2.8e-07 Score=102.26 Aligned_cols=63 Identities=16% Similarity=0.212 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHH-cCcEEEeCceeeEEEEeC-CEEEEEEECCCcEEEcCEEEECCChhHHH-hhccC
Q 006176 387 GIAKSLAKGLAD-KGSEILYKANVTKVILEQ-GKAVGVRLSDGREFYAKTIISNATRWDTF-GKLLK 450 (658)
Q Consensus 387 ~l~~~L~~~l~~-~G~~I~~~~~V~~I~~~~-~~v~gV~~~~G~~i~ad~VV~a~g~~~~~-~~Ll~ 450 (658)
.+.+.|.+.+++ .|++++.+ +|++|..++ +.+++|++.+|+++.||.||.|+|.++.+ .+.++
T Consensus 176 ~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~~~~lg 241 (526)
T 2pyx_A 176 KFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQ 241 (526)
T ss_dssp HHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCCCCCTC
T ss_pred HHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHHHHHhC
Confidence 677788888988 89999999 599998764 45667888888789999999999988754 34443
No 124
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.59 E-value=1.5e-07 Score=99.02 Aligned_cols=55 Identities=13% Similarity=0.108 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 387 ~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
.+.+.+.+.+++.|++++++++|++|..+++.+. |++.+| ++.+|.||+|+|.+.
T Consensus 89 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~-v~~~~g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 89 TYAEYLQVVANHYELNIFENTVVTNISADDAYYT-IATTTE-TYHADYIFVATGDYN 143 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEE-EEESSC-CEEEEEEEECCCSTT
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEE-EEeCCC-EEEeCEEEECCCCCC
Confidence 4455566777888999999999999988765544 777777 599999999999764
No 125
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.58 E-value=3.6e-07 Score=94.08 Aligned_cols=57 Identities=16% Similarity=0.133 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECC----C--cEEEcCEEEECCChh
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSD----G--REFYAKTIISNATRW 442 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~----G--~~i~ad~VV~a~g~~ 442 (658)
..+.+.+.+.+++.|++++++++|++|..+++++.+|++.+ | +++.+|.||+|+|..
T Consensus 184 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 184 KILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp HHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred HHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 45677788888999999999999999988776777787764 4 478999999999843
No 126
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.57 E-value=4.4e-07 Score=92.21 Aligned_cols=34 Identities=32% Similarity=0.516 Sum_probs=32.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
++||+|||||++||++|..|+++|++|+|+|+..
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 4899999999999999999999999999999965
No 127
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.57 E-value=3.3e-07 Score=94.78 Aligned_cols=41 Identities=41% Similarity=0.675 Sum_probs=36.7
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCccee
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (658)
..+||+|||||++|+++|..|++.|++|+|+|+. .+||.+.
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~ 47 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIA 47 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccc
Confidence 3589999999999999999999999999999998 6777543
No 128
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.56 E-value=5.6e-07 Score=92.79 Aligned_cols=40 Identities=35% Similarity=0.692 Sum_probs=35.6
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCcce
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSS 196 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~ 196 (658)
..+||+|||||++|+++|+.|+++|++|+|+|+ ..+||.+
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~ 54 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLT 54 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGG
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccc
Confidence 458999999999999999999999999999999 4567644
No 129
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.54 E-value=6.3e-07 Score=97.97 Aligned_cols=57 Identities=19% Similarity=0.195 Sum_probs=50.5
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChh
Q 006176 385 VGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 385 ~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
...+.+.+.+.+++.|++++++++|++|..+++++. |++.+|+++.+|.||+|+|..
T Consensus 201 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~-v~~~~g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 201 SKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVA-RVITDKRTLDADLVILAAGVS 257 (472)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEE-EEEESSCEEECSEEEECSCEE
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEE-EEEeCCCEEEcCEEEECCCCC
Confidence 457888899999999999999999999988777766 778889899999999999964
No 130
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.54 E-value=1.9e-07 Score=102.54 Aligned_cols=58 Identities=19% Similarity=0.187 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
..+.+.+.+.++++|++|+++++|++|..++++...|++.+|+++.+|.||+|+|...
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p 288 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVP 288 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCc
Confidence 4678889999999999999999999998766443458888998899999999999654
No 131
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.53 E-value=3.4e-07 Score=103.94 Aligned_cols=64 Identities=16% Similarity=0.239 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHcCc--EEEeCceeeEEEEeCC----EEEEEEEC------CC--cEEEcCEEEECCChhHHHhhccCC
Q 006176 387 GIAKSLAKGLADKGS--EILYKANVTKVILEQG----KAVGVRLS------DG--REFYAKTIISNATRWDTFGKLLKG 451 (658)
Q Consensus 387 ~l~~~L~~~l~~~G~--~I~~~~~V~~I~~~~~----~v~gV~~~------~G--~~i~ad~VV~a~g~~~~~~~Ll~~ 451 (658)
.+.+.|.+.+++.|+ +|+++++|++|..+++ .+ .|++. +| +++.||.||.|.|.++.+.+.++.
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v-~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~ 219 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPV-TVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIGR 219 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCE-EEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCE-EEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhCC
Confidence 667778899999987 9999999999988752 34 36554 46 468999999999999888777753
No 132
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.51 E-value=1.3e-07 Score=102.64 Aligned_cols=58 Identities=19% Similarity=0.221 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
..+.+.+.+.++++|++++++++|++|..++++...|++.+|+++.+|.||+|+|...
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p 265 (450)
T 1ges_A 208 PMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREP 265 (450)
T ss_dssp HHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCc
Confidence 4677888899999999999999999998765443458888998899999999999543
No 133
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.51 E-value=2e-06 Score=94.08 Aligned_cols=57 Identities=25% Similarity=0.284 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCC---cEEEcCEEEECCChhH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDG---REFYAKTIISNATRWD 443 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G---~~i~ad~VV~a~g~~~ 443 (658)
..+.+.+.+.++++|++++++++|++|..+++++. |++.++ +++.+|.||+|+|...
T Consensus 221 ~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~-v~~~~~~g~~~~~~D~vi~a~G~~p 280 (476)
T 3lad_A 221 EQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVT-VKFVDAEGEKSQAFDKLIVAVGRRP 280 (476)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEE-EEEESSSEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEE-EEEEeCCCcEEEECCEEEEeeCCcc
Confidence 46788889999999999999999999988776654 666654 5789999999999543
No 134
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.50 E-value=2e-07 Score=102.47 Aligned_cols=58 Identities=22% Similarity=0.318 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
..+.+.+.+.++++|++|+++++|++|..++++...|++.+|+++.+|.||+|+|...
T Consensus 235 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p 292 (495)
T 2wpf_A 235 ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIP 292 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcc
Confidence 4678888999999999999999999998765443458888998999999999999653
No 135
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.49 E-value=1e-06 Score=97.08 Aligned_cols=57 Identities=18% Similarity=0.229 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
..+.+.+.+.++++|++|+++++|++|..+++++ .|++.+|+++.+|.||+|+|...
T Consensus 223 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v-~v~~~~g~~i~aD~Vv~a~G~~p 279 (499)
T 1xdi_A 223 ADAALVLEESFAERGVRLFKNARAASVTRTGAGV-LVTMTDGRTVEGSHALMTIGSVP 279 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSE-EEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEE-EEEECCCcEEEcCEEEECCCCCc
Confidence 4678888999999999999999999998776665 47788888899999999999764
No 136
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.49 E-value=7.8e-08 Score=99.82 Aligned_cols=42 Identities=38% Similarity=0.555 Sum_probs=38.3
Q ss_pred CCccEEEECCChhHHHHHHHHHH--cCCeEEEEecCCCCCccee
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAV--KGARVLVLEKYVIPGGSSG 197 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~--~g~~v~~~e~~~~~gg~~~ 197 (658)
..+||+||||||+||+||++|++ .|++|+|+|+.+.+||.+.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~ 107 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEE
Confidence 46899999999999999999985 5999999999999999765
No 137
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.47 E-value=1.7e-06 Score=94.29 Aligned_cols=57 Identities=16% Similarity=0.098 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCc-EEEcCEEEECCChhH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGR-EFYAKTIISNATRWD 443 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~-~i~ad~VV~a~g~~~ 443 (658)
..+.+.+.+.++++|++++++++|++|..++++ ..|++.+|+ ++.+|.||+|+|...
T Consensus 207 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~G~~~i~~D~vv~a~G~~p 264 (463)
T 2r9z_A 207 PLLSATLAENMHAQGIETHLEFAVAALERDAQG-TTLVAQDGTRLEGFDSVIWAVGRAP 264 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEEETTE-EEEEETTCCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe-EEEEEeCCcEEEEcCEEEECCCCCc
Confidence 467778889999999999999999999877666 458889998 899999999999543
No 138
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.46 E-value=8.2e-07 Score=92.27 Aligned_cols=40 Identities=40% Similarity=0.373 Sum_probs=35.3
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCcc
Q 006176 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGS 195 (658)
Q Consensus 155 ~~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~ 195 (658)
...+||+|||||++|+++|..|++.|++|+|+|+. .+||.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~ 51 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGA 51 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCG
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCc
Confidence 35689999999999999999999999999999975 55654
No 139
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.46 E-value=1.1e-06 Score=97.96 Aligned_cols=53 Identities=26% Similarity=0.336 Sum_probs=42.5
Q ss_pred HHHHHcCcEEEeCceeeEEEEe----CCEEEEEEEC--CCc--EEEcC-EEEECCChhHHHh
Q 006176 394 KGLADKGSEILYKANVTKVILE----QGKAVGVRLS--DGR--EFYAK-TIISNATRWDTFG 446 (658)
Q Consensus 394 ~~l~~~G~~I~~~~~V~~I~~~----~~~v~gV~~~--~G~--~i~ad-~VV~a~g~~~~~~ 446 (658)
..+.+.|.+|++++.|++|..+ +++++||++. +|+ ++.|+ .||+|+|...+-+
T Consensus 235 p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPq 296 (583)
T 3qvp_A 235 PNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPT 296 (583)
T ss_dssp TTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHH
T ss_pred HhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHH
Confidence 3345678999999999999998 7899999975 565 46786 6999999887643
No 140
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.45 E-value=1.1e-06 Score=96.41 Aligned_cols=42 Identities=48% Similarity=0.611 Sum_probs=37.9
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCccee
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (658)
.++||+|||||++|++||..|++.|++|+|+|+.+..||.+.
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~ 65 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCL 65 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccc
Confidence 468999999999999999999999999999999989999664
No 141
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.45 E-value=9.6e-07 Score=96.99 Aligned_cols=48 Identities=21% Similarity=0.188 Sum_probs=40.9
Q ss_pred HHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChh
Q 006176 394 KGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 394 ~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
+.++++|++|++++.|++|..++ ++.+|++.+|+++.+|.||+|+|..
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~~-~v~~v~~~~g~~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGNE-KVERVIDMNNHEYKVDALIFADGRR 312 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECSS-SCCEEEETTCCEEECSEEEECCCEE
T ss_pred HHHHhCCcEEEeCCeeEEEecCC-ceEEEEeCCCeEEEeCEEEECCCcC
Confidence 66788899999999999998554 4566888899899999999999955
No 142
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.45 E-value=6e-07 Score=93.03 Aligned_cols=52 Identities=19% Similarity=0.177 Sum_probs=40.6
Q ss_pred HHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 389 AKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 389 ~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
.+.+.+.+++.|++++.++ |++|..+++.++ |++ +|+++.+|.||+|+|.+.
T Consensus 73 ~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~-v~~-~~~~~~~~~vv~A~G~~~ 124 (333)
T 1vdc_A 73 TDKFRKQSERFGTTIFTET-VTKVDFSSKPFK-LFT-DSKAILADAVILAIGAVA 124 (333)
T ss_dssp HHHHHHHHHHTTCEEECCC-CCEEECSSSSEE-EEC-SSEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEE-EEE-CCcEEEcCEEEECCCCCc
Confidence 3445566677899999987 999987766554 666 777899999999999764
No 143
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.44 E-value=7.5e-07 Score=91.30 Aligned_cols=51 Identities=16% Similarity=0.225 Sum_probs=39.9
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEeC--CEEEEEEECCCcEEEcCEEEECCChh
Q 006176 392 LAKGLADKGSEILYKANVTKVILEQ--GKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 392 L~~~l~~~G~~I~~~~~V~~I~~~~--~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
+.+.+++.|++++.+++|+.|..++ +....|.+.+|+++.+|.||+|+|..
T Consensus 62 ~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 62 LKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp HHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 4455667799999999999997652 22334778888889999999999965
No 144
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.44 E-value=5.9e-07 Score=99.37 Aligned_cols=58 Identities=16% Similarity=0.052 Sum_probs=51.7
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 385 VGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 385 ~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
-..+.+.+.+.++++|+++++++.|+++...++++. |.+.++.++.+|.|++|+|...
T Consensus 262 D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~-v~~~~~~~~~~D~vLvAvGR~P 319 (542)
T 4b1b_A 262 DQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKIL-VEFSDKTSELYDTVLYAIGRKG 319 (542)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEE-EEETTSCEEEESEEEECSCEEE
T ss_pred chhHHHHHHHHHHhhcceeecceEEEEEEecCCeEE-EEEcCCCeEEEEEEEEcccccC
Confidence 357888999999999999999999999999888775 8888888899999999999654
No 145
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.44 E-value=9.4e-07 Score=96.25 Aligned_cols=39 Identities=26% Similarity=0.139 Sum_probs=35.9
Q ss_pred CCccEEEECCChhHHHHHHHHHHcC-----CeEEEEecCCCCCc
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKG-----ARVLVLEKYVIPGG 194 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g-----~~v~~~e~~~~~gg 194 (658)
..+||+|||||++||++|..|++.| .+|+|||+.+..|.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~ 72 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRW 72 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCC
Confidence 3589999999999999999999999 99999999988773
No 146
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.43 E-value=1.1e-06 Score=95.86 Aligned_cols=42 Identities=38% Similarity=0.552 Sum_probs=38.6
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCccee
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (658)
.++||+|||||++|+++|..|++.|++|+|+|+.+.+||.+.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCL 46 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcccccc
Confidence 468999999999999999999999999999999988888654
No 147
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.42 E-value=1.3e-06 Score=96.75 Aligned_cols=53 Identities=15% Similarity=0.210 Sum_probs=41.2
Q ss_pred HHHHHHHHcCcEEEeCceeeEEEEeC--CEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 391 SLAKGLADKGSEILYKANVTKVILEQ--GKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 391 ~L~~~l~~~G~~I~~~~~V~~I~~~~--~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
.+.+.+++.|++++.+++|++|..+. +....|++.+|+++.+|.||+|+|...
T Consensus 272 ~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 272 ALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKW 326 (521)
T ss_dssp HHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCc
Confidence 35556677899999999999997542 222347888898899999999999653
No 148
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.41 E-value=1.6e-06 Score=94.42 Aligned_cols=40 Identities=25% Similarity=0.400 Sum_probs=37.7
Q ss_pred ccEEEECCChhHHHHHHHHHH---cCCe---EEEEecCCCCCccee
Q 006176 158 YDAIVIGSGIGGLVAATQLAV---KGAR---VLVLEKYVIPGGSSG 197 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~---~g~~---v~~~e~~~~~gg~~~ 197 (658)
+||+|||||++||++|..|++ .|++ |+|+|+.+.+||.+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~ 48 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWN 48 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEee
Confidence 689999999999999999999 9999 999999999998765
No 149
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.40 E-value=3.2e-06 Score=92.23 Aligned_cols=41 Identities=39% Similarity=0.571 Sum_probs=38.3
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCccee
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (658)
++||+|||||++|++||..|++.|++|+|+|+.+.+||.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 42 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCL 42 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCC
Confidence 58999999999999999999999999999999988988664
No 150
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.39 E-value=1.4e-06 Score=97.89 Aligned_cols=54 Identities=15% Similarity=0.179 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChh
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
..+.+.+.+.+++.|++|+++++|++|..+++ +|++.+|+++.+|.||+|+|..
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~---~v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEENGA---VVRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGGGT---EEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecCCC---EEEECCCCEEEcCEEEEccCCC
Confidence 57888899999999999999999999976555 3678899999999999999954
No 151
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.37 E-value=3.5e-07 Score=99.41 Aligned_cols=56 Identities=11% Similarity=0.061 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
..+.+.+.+.++++|++|+++++|++|..+++++ .|++.+| ++.+|.||+|+|...
T Consensus 189 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v-~v~~~~g-~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQAVIFHFEETVLGIEETANGI-VLETSEQ-EISCDSGIFALNLHP 244 (452)
T ss_dssp HHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCE-EEEESSC-EEEESEEEECSCCBC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeE-EEEECCC-EEEeCEEEECcCCCC
Confidence 5788889999999999999999999998777777 6888777 799999999999643
No 152
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.36 E-value=8.4e-07 Score=96.39 Aligned_cols=58 Identities=17% Similarity=0.166 Sum_probs=49.6
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 385 VGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 385 ~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
...+.+.+.+.++++|++|+++++|++|..+++++..|.+ +|+++.+|.||+|+|...
T Consensus 190 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D~vv~a~G~~p 247 (452)
T 2cdu_A 190 DKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSDIAILCIGFRP 247 (452)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEET-TSCEEEESEEEECCCEEE
T ss_pred hhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECCEEEECcCCCC
Confidence 3578888999999999999999999999876777766765 788899999999999653
No 153
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.35 E-value=1.3e-06 Score=93.41 Aligned_cols=52 Identities=12% Similarity=0.047 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChh
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
..+.+.+.+.++++|++++++++|++|.. +. |++.+|+++.+|.||+++|..
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~~---v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE--HE---IVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS--SE---EEETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC--Ce---EEECCCCEEeeeEEEECCCCC
Confidence 57888899999999999999999999953 32 678999999999999999843
No 154
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.34 E-value=2.6e-06 Score=93.82 Aligned_cols=59 Identities=19% Similarity=0.239 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHcC-cEEEeCceeeEEEEeC--CEEEEEEEC--CC-----cEEEcCEEEECCChhHHH
Q 006176 387 GIAKSLAKGLADKG-SEILYKANVTKVILEQ--GKAVGVRLS--DG-----REFYAKTIISNATRWDTF 445 (658)
Q Consensus 387 ~l~~~L~~~l~~~G-~~I~~~~~V~~I~~~~--~~v~gV~~~--~G-----~~i~ad~VV~a~g~~~~~ 445 (658)
....++.+.++++| ++|++++.|++|..++ +++++|++. +| .++.|+.||+|+|.+.+.
T Consensus 222 s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~ 290 (504)
T 1n4w_A 222 SLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGST 290 (504)
T ss_dssp CTTTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHH
T ss_pred CHHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCH
Confidence 33445556666675 9999999999999985 389999884 56 358899999999988653
No 155
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.33 E-value=5e-06 Score=91.00 Aligned_cols=41 Identities=39% Similarity=0.669 Sum_probs=37.8
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCccee
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (658)
++||+|||||++|+++|..|++.|++|+|+|+.+.+||.+.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 46 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCL 46 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCcee
Confidence 58999999999999999999999999999999888887553
No 156
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.33 E-value=2.9e-06 Score=92.76 Aligned_cols=41 Identities=34% Similarity=0.416 Sum_probs=37.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCccee
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (658)
++||+|||||++|+++|..|++.|++|+|+|+.+.+||.+.
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 45 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCL 45 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccc
Confidence 58999999999999999999999999999999888888653
No 157
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.32 E-value=1.8e-06 Score=93.75 Aligned_cols=40 Identities=38% Similarity=0.557 Sum_probs=36.5
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCccee
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (658)
++||+|||||++|+++|..|++.|++|+|+|+. ..||.+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~ 42 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCL 42 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCc
Confidence 589999999999999999999999999999998 7777653
No 158
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.31 E-value=4e-07 Score=93.60 Aligned_cols=41 Identities=32% Similarity=0.593 Sum_probs=36.7
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCccee
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (658)
.+|||+|||||++|++||.+|++.|++|+|+|+. .+||.+.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~ 45 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMA 45 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeee
Confidence 4699999999999999999999999999999985 5677653
No 159
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.30 E-value=3.1e-06 Score=94.34 Aligned_cols=52 Identities=19% Similarity=0.367 Sum_probs=41.4
Q ss_pred HHcCcEEEeCceeeEEEEe--CCEEEEEEEC--CCc--EEEc-CEEEECCChhHHHhhc
Q 006176 397 ADKGSEILYKANVTKVILE--QGKAVGVRLS--DGR--EFYA-KTIISNATRWDTFGKL 448 (658)
Q Consensus 397 ~~~G~~I~~~~~V~~I~~~--~~~v~gV~~~--~G~--~i~a-d~VV~a~g~~~~~~~L 448 (658)
.+.|.+|++++.|++|..+ +++++||++. +|+ ++.| +.||+|+|...+-..|
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL 275 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLL 275 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHH
T ss_pred cCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHH
Confidence 3468999999999999999 7899999885 365 4667 5699999988764333
No 160
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.24 E-value=5.4e-06 Score=94.29 Aligned_cols=36 Identities=28% Similarity=0.475 Sum_probs=33.4
Q ss_pred CccEEEECCChhHHHHHHHHHH-----cCCeEEEEecCCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAV-----KGARVLVLEKYVIP 192 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~-----~g~~v~~~e~~~~~ 192 (658)
.+||+|||||++||++|+.|++ .|++|+|+||...+
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 5899999999999999999999 99999999997643
No 161
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.22 E-value=1.5e-06 Score=96.70 Aligned_cols=57 Identities=23% Similarity=0.181 Sum_probs=42.9
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEe----C-CEEEEEEECC--C-c--EEEc-CEEEECCChhHHHhhc
Q 006176 392 LAKGLADKGSEILYKANVTKVILE----Q-GKAVGVRLSD--G-R--EFYA-KTIISNATRWDTFGKL 448 (658)
Q Consensus 392 L~~~l~~~G~~I~~~~~V~~I~~~----~-~~v~gV~~~~--G-~--~i~a-d~VV~a~g~~~~~~~L 448 (658)
|...+.+.+.+|++++.|++|..+ + ++++||++.+ | + ++.| +.||+|+|...+-+-|
T Consensus 214 L~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL 281 (566)
T 3fim_B 214 LRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILL 281 (566)
T ss_dssp HHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHH
T ss_pred hhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHH
Confidence 333445668999999999999988 4 5889998853 4 3 4778 6799999988764333
No 162
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.22 E-value=1.2e-06 Score=97.05 Aligned_cols=53 Identities=21% Similarity=0.283 Sum_probs=42.7
Q ss_pred HcCcEEEeCceeeEEEEeCCEEEEEEECCC---cEEEcCEEEECCChhHHHhhccC
Q 006176 398 DKGSEILYKANVTKVILEQGKAVGVRLSDG---REFYAKTIISNATRWDTFGKLLK 450 (658)
Q Consensus 398 ~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G---~~i~ad~VV~a~g~~~~~~~Ll~ 450 (658)
+.+.+|++++.|++|..+++++++|++.+. .++.|+.||+|+|...+..-|+-
T Consensus 223 r~nl~v~~~~~v~~i~~~~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LLl~ 278 (526)
T 3t37_A 223 RKNLTILTGSRVRRLKLEGNQVRSLEVVGRQGSAEVFADQIVLCAGALESPALLMR 278 (526)
T ss_dssp CTTEEEECSCEEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHHHH
T ss_pred CCCeEEEeCCEEEEEEecCCeEEEEEEEecCceEEEeecceEEcccccCCcchhhh
Confidence 457899999999999999999999987433 25778999999998877544443
No 163
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.21 E-value=3.2e-06 Score=89.68 Aligned_cols=44 Identities=11% Similarity=0.130 Sum_probs=37.8
Q ss_pred HHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChh
Q 006176 396 LADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 396 l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
+++.|++++++++|++|..++.. |++.+|+++.+|++|+|+|..
T Consensus 72 ~~~~~i~~~~~~~V~~id~~~~~---v~~~~g~~~~yd~lvlAtG~~ 115 (385)
T 3klj_A 72 YEKNNIKVITSEFATSIDPNNKL---VTLKSGEKIKYEKLIIASGSI 115 (385)
T ss_dssp HHHTTCEEECSCCEEEEETTTTE---EEETTSCEEECSEEEECCCEE
T ss_pred HHHCCCEEEeCCEEEEEECCCCE---EEECCCCEEECCEEEEecCCC
Confidence 45679999999999999877764 668899999999999999963
No 164
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.18 E-value=9.5e-06 Score=89.32 Aligned_cols=59 Identities=22% Similarity=0.154 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHcC-cEEEeCceeeEEEEeC-C-EEEEEEEC--CC-----cEEEcCEEEECCChhHHH
Q 006176 387 GIAKSLAKGLADKG-SEILYKANVTKVILEQ-G-KAVGVRLS--DG-----REFYAKTIISNATRWDTF 445 (658)
Q Consensus 387 ~l~~~L~~~l~~~G-~~I~~~~~V~~I~~~~-~-~v~gV~~~--~G-----~~i~ad~VV~a~g~~~~~ 445 (658)
....++.+.++++| ++|++++.|++|..++ + ++++|++. +| .++.|+.||+|+|.+.+.
T Consensus 227 s~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp 295 (507)
T 1coy_A 227 SLDKTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTS 295 (507)
T ss_dssp CTTTTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHH
T ss_pred ChHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCH
Confidence 33445555555665 9999999999999986 4 79999884 56 258899999999988653
No 165
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.13 E-value=6.8e-06 Score=88.60 Aligned_cols=44 Identities=23% Similarity=0.275 Sum_probs=37.0
Q ss_pred HHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChh
Q 006176 396 LADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 396 l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
+++.|++++++++|+.|..++.. |++.+|+++.+|.||+|+|..
T Consensus 70 ~~~~gv~~~~~~~v~~i~~~~~~---v~~~~g~~~~~d~lviAtG~~ 113 (431)
T 1q1r_A 70 YAAQNIQLLGGTQVTAINRDRQQ---VILSDGRALDYDRLVLATGGR 113 (431)
T ss_dssp HHHTTEEEECSCCEEEEETTTTE---EEETTSCEEECSEEEECCCEE
T ss_pred HHhCCCEEEeCCEEEEEECCCCE---EEECCCCEEECCEEEEcCCCC
Confidence 45679999999999999876653 667888889999999999964
No 166
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.13 E-value=1.2e-06 Score=89.79 Aligned_cols=35 Identities=26% Similarity=0.391 Sum_probs=32.9
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
+.|||+|||||+|||+||.+|+++|++|+|+|+..
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~ 37 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM 37 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 46999999999999999999999999999999875
No 167
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.03 E-value=1.4e-05 Score=87.77 Aligned_cols=55 Identities=15% Similarity=0.146 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCc----EEEcCEEEECCCh
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGR----EFYAKTIISNATR 441 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~----~i~ad~VV~a~g~ 441 (658)
..+.+.+.+.++++|++|++|+.|++|.. ++....+...||+ ++.+|.||+|+|.
T Consensus 272 ~~~~~~~~~~L~~~GV~v~~~~~v~~v~~-~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 272 KKLSSYAQSHLENTSIKVHLRTAVAKVEE-KQLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEECS-SEEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred HHHHHHHHHHHHhcceeeecCceEEEEeC-CceEEEEEecCcccceeeeccCEEEEccCC
Confidence 57888899999999999999999999852 3333345556764 5899999999994
No 168
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.02 E-value=3.1e-05 Score=85.92 Aligned_cols=56 Identities=16% Similarity=0.337 Sum_probs=43.5
Q ss_pred HHHHHHHH-HHcCcEEEeCceeeEEEEeC-CEEEEEEECC---Cc--EEEcC-EEEECCChhHH
Q 006176 389 AKSLAKGL-ADKGSEILYKANVTKVILEQ-GKAVGVRLSD---GR--EFYAK-TIISNATRWDT 444 (658)
Q Consensus 389 ~~~L~~~l-~~~G~~I~~~~~V~~I~~~~-~~v~gV~~~~---G~--~i~ad-~VV~a~g~~~~ 444 (658)
..++.+.+ .+.|++|++++.|++|..++ +++++|++.+ |+ ++.|+ .||+|+|.+.+
T Consensus 211 ~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~s 274 (546)
T 2jbv_A 211 SVSYIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDT 274 (546)
T ss_dssp HHHHTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCC
Confidence 34444333 35799999999999999988 8899998744 53 68898 99999998654
No 169
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.02 E-value=5.5e-05 Score=80.03 Aligned_cols=51 Identities=16% Similarity=0.159 Sum_probs=42.7
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 392 LAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 392 L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
+.+.+++.|++++++++|++|..+++.+ .|++.+|+++.+|.||+|+|...
T Consensus 193 l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~g~~i~~d~vv~a~G~~p 243 (384)
T 2v3a_A 193 VQAGLEGLGVRFHLGPVLASLKKAGEGL-EAHLSDGEVIPCDLVVSAVGLRP 243 (384)
T ss_dssp HHHHHHTTTCEEEESCCEEEEEEETTEE-EEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHcCCEEEeCCEEEEEEecCCEE-EEEECCCCEEECCEEEECcCCCc
Confidence 4455677899999999999998877654 58888998999999999999653
No 170
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.01 E-value=4.7e-06 Score=95.93 Aligned_cols=43 Identities=23% Similarity=0.311 Sum_probs=39.9
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCccee
Q 006176 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (658)
Q Consensus 155 ~~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (658)
...+||+|||||++||+||..|+++|++|+|+|+.+.+||.+.
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~ 429 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLN 429 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeee
Confidence 4568999999999999999999999999999999999999765
No 171
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.99 E-value=8.8e-06 Score=87.10 Aligned_cols=44 Identities=18% Similarity=0.291 Sum_probs=36.9
Q ss_pred HHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChh
Q 006176 396 LADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 396 l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
+.+.|++++++++|+.|..++.. |.+.+|+++.+|++|+|+|..
T Consensus 67 ~~~~~i~~~~~~~v~~id~~~~~---v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 67 YGEARIDMLTGPEVTALDVQTRT---ISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp HHHTTCEEEESCCEEEEETTTTE---EEETTSCEEECSEEEECCCEE
T ss_pred HHHCCCEEEeCCEEEEEECCCCE---EEECCCCEEECCEEEEccCCc
Confidence 34568999999999999876653 567889899999999999964
No 172
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.97 E-value=1.5e-05 Score=85.94 Aligned_cols=48 Identities=13% Similarity=0.154 Sum_probs=37.8
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 392 LAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 392 L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
+.+.+++.|++++. .+|++|..+++. |++.+|+++.+|.||+|+|...
T Consensus 65 l~~~~~~~gv~~~~-~~v~~id~~~~~---V~~~~g~~i~~d~lviAtG~~~ 112 (437)
T 3sx6_A 65 IRHYVERKGIHFIA-QSAEQIDAEAQN---ITLADGNTVHYDYLMIATGPKL 112 (437)
T ss_dssp CHHHHHTTTCEEEC-SCEEEEETTTTE---EEETTSCEEECSEEEECCCCEE
T ss_pred HHHHHHHCCCEEEE-eEEEEEEcCCCE---EEECCCCEEECCEEEECCCCCc
Confidence 33445677999974 689999877663 6688998899999999999754
No 173
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.97 E-value=1.2e-05 Score=87.87 Aligned_cols=36 Identities=33% Similarity=0.449 Sum_probs=32.4
Q ss_pred CccEEEECCChhHHHHHHHHHHc--CCeEEEEecCCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVK--GARVLVLEKYVIP 192 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~--g~~v~~~e~~~~~ 192 (658)
.+||+|||||++|+++|..|++. |.+|+|+|+....
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 46999999999999999999996 8999999998654
No 174
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.96 E-value=6.1e-05 Score=81.07 Aligned_cols=51 Identities=20% Similarity=0.193 Sum_probs=43.2
Q ss_pred HHHHHHHcCcEEEeCceeeEEEE--eCCEEEEEEECCCcEEEcCEEEECCChh
Q 006176 392 LAKGLADKGSEILYKANVTKVIL--EQGKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 392 L~~~l~~~G~~I~~~~~V~~I~~--~~~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
+.+.++++|++++++++|++|.. +++++..|++.+|+++.+|.||+|+|..
T Consensus 197 l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 197 YEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLI 249 (431)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEE
T ss_pred HHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCC
Confidence 34456778999999999999987 5677778999999999999999999954
No 175
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.94 E-value=7.1e-05 Score=81.12 Aligned_cols=50 Identities=24% Similarity=0.269 Sum_probs=41.4
Q ss_pred HHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 393 AKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 393 ~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
.+.++++|++++++++|++|..+++.+ .|++.+|+++.+|.||+|+|...
T Consensus 215 ~~~l~~~Gv~i~~~~~V~~i~~~~~~v-~v~~~~g~~i~~D~vv~A~G~~p 264 (455)
T 2yqu_A 215 ERVFKKQGLTIRTGVRVTAVVPEAKGA-RVELEGGEVLEADRVLVAVGRRP 264 (455)
T ss_dssp HHHHHHHTCEEECSCCEEEEEEETTEE-EEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHCCCEEEECCEEEEEEEeCCEE-EEEECCCeEEEcCEEEECcCCCc
Confidence 344567799999999999999877765 37777888899999999999654
No 176
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.94 E-value=7.3e-06 Score=93.83 Aligned_cols=44 Identities=34% Similarity=0.446 Sum_probs=40.4
Q ss_pred CCCCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCccee
Q 006176 154 GADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (658)
Q Consensus 154 ~~~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (658)
....+||+|||||++||+||+.|+++|++|+|+|+.+..||.+.
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~ 431 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVT 431 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHH
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEee
Confidence 34568999999999999999999999999999999999999765
No 177
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.91 E-value=4.6e-06 Score=90.89 Aligned_cols=41 Identities=34% Similarity=0.418 Sum_probs=38.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCccee
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (658)
++||+|||||++|+++|..|++.|++|+|+|+.+.+||.+.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~ 44 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCL 44 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCccc
Confidence 58999999999999999999999999999999999999765
No 178
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.89 E-value=4.7e-05 Score=81.35 Aligned_cols=50 Identities=24% Similarity=0.192 Sum_probs=42.3
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChh
Q 006176 392 LAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 392 L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
+.+.++++|++++++++|++|..++ ++.+|++.+|+++.+|.||+|+|..
T Consensus 191 l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~v~~~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 191 LRGLLTELGVQVELGTGVVGFSGEG-QLEQVMASDGRSFVADSALICVGAE 240 (410)
T ss_dssp HHHHHHHHTCEEECSCCEEEEECSS-SCCEEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHCCCEEEeCCEEEEEeccC-cEEEEEECCCCEEEcCEEEEeeCCe
Confidence 4555678899999999999998654 5567899999999999999999964
No 179
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.88 E-value=9.6e-06 Score=89.70 Aligned_cols=57 Identities=14% Similarity=0.203 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCC-EE--EEEEECCCc-EEEcCEEEECCChh
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQG-KA--VGVRLSDGR-EFYAKTIISNATRW 442 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~-~v--~gV~~~~G~-~i~ad~VV~a~g~~ 442 (658)
..+.+.+.+.++++|++|+++++|++|..+++ ++ ..|++.+|+ ++.+|.||+|+|..
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~ 315 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQ 315 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCE
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCc
Confidence 57788899999999999999999999987544 33 347788887 89999999999955
No 180
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.88 E-value=1.6e-05 Score=88.89 Aligned_cols=35 Identities=23% Similarity=0.302 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHHHc--CCeEEEEecCCCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVK--GARVLVLEKYVIP 192 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~--g~~v~~~e~~~~~ 192 (658)
+||+|||||++||+||..|++. |++|+|+|+.+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 5899999999999999999998 8999999998654
No 181
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.82 E-value=0.0001 Score=79.61 Aligned_cols=50 Identities=14% Similarity=0.148 Sum_probs=39.1
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 392 LAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 392 L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
+.+.+++.|++++++++|++|..+ +++..|.+ +|+++.+|.||+|+|...
T Consensus 197 l~~~l~~~gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~d~vi~a~G~~p 246 (447)
T 1nhp_A 197 LTEEMEANNITIATGETVERYEGD-GRVQKVVT-DKNAYDADLVVVAVGVRP 246 (447)
T ss_dssp HHHHHHTTTEEEEESCCEEEEECS-SBCCEEEE-SSCEEECSEEEECSCEEE
T ss_pred HHHHHHhCCCEEEcCCEEEEEEcc-CcEEEEEE-CCCEEECCEEEECcCCCC
Confidence 445567889999999999999865 55545666 556799999999999653
No 182
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.82 E-value=8.8e-06 Score=87.69 Aligned_cols=43 Identities=9% Similarity=0.118 Sum_probs=35.4
Q ss_pred HHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChh
Q 006176 396 LADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 396 l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
+++.|++++.+ +|++|..++.. |++++|+++.+|++|+|+|..
T Consensus 66 ~~~~gv~~i~~-~v~~Id~~~~~---V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 66 LPKFNIEFINE-KAESIDPDANT---VTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp GGGGTEEEECS-CEEEEETTTTE---EEETTCCEEECSEEEECCCCE
T ss_pred HHHCCcEEEEe-EEEEEECCCCE---EEECCCCEEECCEEEEeCCCC
Confidence 34568898865 69999887765 568999999999999999964
No 183
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.81 E-value=0.00016 Score=78.55 Aligned_cols=50 Identities=20% Similarity=0.267 Sum_probs=40.5
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEEC-C--Cc--EEEcCEEEECCChh
Q 006176 392 LAKGLADKGSEILYKANVTKVILEQGKAVGVRLS-D--GR--EFYAKTIISNATRW 442 (658)
Q Consensus 392 L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~-~--G~--~i~ad~VV~a~g~~ 442 (658)
+.+.++++|++++++++|++|..+++.+. |++. + |+ ++.+|.||+|+|..
T Consensus 216 l~~~l~~~gV~i~~~~~v~~i~~~~~~~~-v~~~~~~~g~~~~i~~D~vv~a~G~~ 270 (464)
T 2eq6_A 216 LRRALEKEGIRVRTKTKAVGYEKKKDGLH-VRLEPAEGGEGEEVVVDKVLVAVGRK 270 (464)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEETTEEE-EEEEETTCCSCEEEEESEEEECSCEE
T ss_pred HHHHHHhcCCEEEcCCEEEEEEEeCCEEE-EEEeecCCCceeEEEcCEEEECCCcc
Confidence 34556778999999999999988777654 6665 6 76 79999999999954
No 184
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.81 E-value=1.3e-05 Score=88.42 Aligned_cols=43 Identities=44% Similarity=0.653 Sum_probs=37.6
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCeEEEEecCC--------CCCccee
Q 006176 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV--------IPGGSSG 197 (658)
Q Consensus 155 ~~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~--------~~gg~~~ 197 (658)
...+||+|||||++|++||..|++.|++|+|+|+.+ ..||.|.
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~ 80 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCV 80 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccC
Confidence 346999999999999999999999999999999964 5677654
No 185
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.80 E-value=1.1e-05 Score=88.30 Aligned_cols=57 Identities=12% Similarity=0.147 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECC---Cc--EEEcCEEEECCChh
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSD---GR--EFYAKTIISNATRW 442 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~---G~--~i~ad~VV~a~g~~ 442 (658)
..+.+.+.+.++++|+++++++.|++|...++....|++.+ |+ ++.+|.||+|+|..
T Consensus 225 ~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 225 QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRV 286 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCC
Confidence 57888899999999999999999999987443322355543 54 47899999999954
No 186
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.79 E-value=0.00022 Score=76.07 Aligned_cols=46 Identities=24% Similarity=0.367 Sum_probs=38.6
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChh
Q 006176 392 LAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 392 L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
+.+.++++|++++++++|++|. ++ .|++.+|+++.+|.||+|+|..
T Consensus 193 l~~~l~~~GV~i~~~~~v~~i~--~~---~v~~~~g~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 193 VARYHAAQGVDLRFERSVTGSV--DG---VVLLDDGTRIAADMVVVGIGVL 238 (408)
T ss_dssp HHHHHHHTTCEEEESCCEEEEE--TT---EEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHcCcEEEeCCEEEEEE--CC---EEEECCCCEEEcCEEEECcCCC
Confidence 4455678899999999999998 44 4778899999999999999954
No 187
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.78 E-value=1.2e-05 Score=87.17 Aligned_cols=41 Identities=46% Similarity=0.591 Sum_probs=38.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCccee
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (658)
++||+|||||++|+++|..|++.|++|+|+|+.+.+||.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 41 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCL 41 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccc
Confidence 37999999999999999999999999999999988888664
No 188
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.78 E-value=1.1e-05 Score=88.04 Aligned_cols=57 Identities=14% Similarity=0.190 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEE-----CCCcEEEcCEEEECCChh
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRL-----SDGREFYAKTIISNATRW 442 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~-----~~G~~i~ad~VV~a~g~~ 442 (658)
..+.+.+.+.++++|++++++++|++|..++++...|++ .+++++.+|.||+|+|..
T Consensus 220 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 220 MEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCC
Confidence 567888899999999999999999999877654123553 456789999999999954
No 189
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.75 E-value=1.3e-05 Score=88.03 Aligned_cols=56 Identities=14% Similarity=0.071 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEEC--CC--cEEEcCEEEECCChhH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLS--DG--REFYAKTIISNATRWD 443 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~--~G--~~i~ad~VV~a~g~~~ 443 (658)
..+.+.+.+.+++. ++|+++++|++|..+++++. |++. +| +++.+|.||+|+|...
T Consensus 215 ~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~-v~~~~~~G~~~~i~~D~Vi~a~G~~p 274 (492)
T 3ic9_A 215 EEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVE-VIYFDKSGQKTTESFQYVLAATGRKA 274 (492)
T ss_dssp HHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEE-EEEECTTCCEEEEEESEEEECSCCEE
T ss_pred HHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEE-EEEEeCCCceEEEECCEEEEeeCCcc
Confidence 57788888888887 99999999999998777665 6664 67 5799999999999543
No 190
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.75 E-value=1.8e-05 Score=86.18 Aligned_cols=56 Identities=16% Similarity=0.243 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
..+.+.+.+.++++|++|+++++|++|..+++.+ .|++. +.++.+|.||+|+|.+.
T Consensus 216 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~v~~~-~~~i~aD~Vv~a~G~~p 271 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEF-VLTTT-HGELRADKLLVATGRTP 271 (467)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEE-EEEET-TEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEE-EEEEC-CcEEEcCEEEECCCCCc
Confidence 4788889999999999999999999998776654 47776 45799999999999764
No 191
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.75 E-value=1.2e-05 Score=87.99 Aligned_cols=57 Identities=16% Similarity=0.059 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCE-EEEEEECC---C----cEEEcCEEEECCChh
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGK-AVGVRLSD---G----REFYAKTIISNATRW 442 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~-v~gV~~~~---G----~~i~ad~VV~a~g~~ 442 (658)
..+.+.+.+.++++|+++++++.|++|..+++. ...|++.+ | +++.+|.||+|+|..
T Consensus 228 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~ 292 (478)
T 3dk9_A 228 SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRV 292 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccc
Confidence 577888899999999999999999999876443 33477765 2 578999999999954
No 192
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.73 E-value=1.6e-05 Score=85.57 Aligned_cols=35 Identities=20% Similarity=0.183 Sum_probs=31.9
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.++||+|||||++||++|+.|+++|++|+|+|+..
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 45799999999999999999999999999999975
No 193
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.73 E-value=4e-05 Score=84.18 Aligned_cols=42 Identities=19% Similarity=0.080 Sum_probs=32.4
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCcce
Q 006176 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSS 196 (658)
Q Consensus 155 ~~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~ 196 (658)
..-+||||||+|++||++|+.|.++|...+++|+.+..|+..
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~ 78 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPK 78 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCC
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcc
Confidence 345899999999999999999999988878888877766643
No 194
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.72 E-value=1.6e-05 Score=86.86 Aligned_cols=57 Identities=12% Similarity=0.132 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCE-EEEEEECCC-cEEEcCEEEECCChh
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGK-AVGVRLSDG-REFYAKTIISNATRW 442 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~-v~gV~~~~G-~~i~ad~VV~a~g~~ 442 (658)
..+.+.+.+.++++|++++++++|++|..++++ +..|++.+| +++.+|.||+|+|..
T Consensus 226 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~ 284 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRK 284 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCC
Confidence 467788889999999999999999999875433 345888899 789999999999954
No 195
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.71 E-value=2.1e-05 Score=86.02 Aligned_cols=57 Identities=18% Similarity=0.140 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCc-----EEEcCEEEECCChh
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGR-----EFYAKTIISNATRW 442 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~-----~i~ad~VV~a~g~~ 442 (658)
..+.+.+.+.++++|++|+++++|++|..+++....|++.+++ ++.+|.||+|+|..
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~ 288 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRK 288 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccc
Confidence 5778888999999999999999999998755432347666553 68999999999954
No 196
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.69 E-value=0.00023 Score=77.58 Aligned_cols=36 Identities=17% Similarity=0.186 Sum_probs=32.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (658)
..+++|||+|..|+-.|..|++.|.+|+++|+.+.+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 220 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETV 220 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcc
Confidence 357999999999999999999999999999997653
No 197
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.69 E-value=0.00026 Score=76.60 Aligned_cols=51 Identities=18% Similarity=0.216 Sum_probs=39.5
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEEC---CCcEEEcCEEEECCChhH
Q 006176 392 LAKGLADKGSEILYKANVTKVILEQGKAVGVRLS---DGREFYAKTIISNATRWD 443 (658)
Q Consensus 392 L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~---~G~~i~ad~VV~a~g~~~ 443 (658)
+.+.++++|++++++++|++|..+++++. |++. +++++.+|.||+|+|...
T Consensus 217 l~~~l~~~gv~i~~~~~v~~i~~~~~~~~-v~~~~~g~~~~~~~D~vv~a~G~~p 270 (455)
T 1ebd_A 217 IKKRLKKKGVEVVTNALAKGAEEREDGVT-VTYEANGETKTIDADYVLVTVGRRP 270 (455)
T ss_dssp HHHHHHHTTCEEEESEEEEEEEEETTEEE-EEEEETTEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEeCCeEE-EEEEeCCceeEEEcCEEEECcCCCc
Confidence 34456778999999999999987776643 5554 456799999999999654
No 198
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.68 E-value=1.9e-05 Score=85.83 Aligned_cols=55 Identities=15% Similarity=0.119 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCC--cEEEcCEEEECCChhH
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDG--REFYAKTIISNATRWD 443 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G--~~i~ad~VV~a~g~~~ 443 (658)
..+.+.+.+.++++|++++++++|++|.. +++ .|+..+| +++.+|.||+|+|...
T Consensus 212 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~v-~v~~~~G~~~~i~~D~vv~a~G~~p 268 (458)
T 1lvl_A 212 SELTAPVAESLKKLGIALHLGHSVEGYEN--GCL-LANDGKGGQLRLEADRVLVAVGRRP 268 (458)
T ss_dssp HHHHHHHHHHHHHHTCEEETTCEEEEEET--TEE-EEECSSSCCCEECCSCEEECCCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEe--CCE-EEEECCCceEEEECCEEEECcCCCc
Confidence 46778888999999999999999999976 343 3554456 5799999999999643
No 199
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.67 E-value=4.7e-05 Score=86.83 Aligned_cols=43 Identities=26% Similarity=0.398 Sum_probs=39.3
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCccee
Q 006176 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (658)
Q Consensus 155 ~~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (658)
...+||+|||||++|++||..|++.|++|+|+|+.+..||...
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 4468999999999999999999999999999999999998654
No 200
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.66 E-value=0.00029 Score=77.31 Aligned_cols=52 Identities=23% Similarity=0.248 Sum_probs=41.6
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcE-EEcCEEEECCChhH
Q 006176 392 LAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGRE-FYAKTIISNATRWD 443 (658)
Q Consensus 392 L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~-i~ad~VV~a~g~~~ 443 (658)
+.+.++++|++++++++|++|..++++...|++.+|++ +.+|.||+|+|...
T Consensus 223 l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p 275 (500)
T 1onf_A 223 LENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSP 275 (500)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCC
T ss_pred HHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCc
Confidence 44557888999999999999987543323578889987 99999999999543
No 201
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.65 E-value=3.4e-05 Score=81.59 Aligned_cols=51 Identities=8% Similarity=0.001 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhHHHhhcc
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWDTFGKLL 449 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~~~~~Ll 449 (658)
..+.+.|.+.+++.|++|+++++|++|... .++.+|.||.|.|.++. .+.+
T Consensus 98 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~------------~~~~ad~vV~AdG~~S~-R~~l 148 (381)
T 3c4a_A 98 RGLVHALRDKCRSQGIAIRFESPLLEHGEL------------PLADYDLVVLANGVNHK-TAHF 148 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCSGGGC------------CGGGCSEEEECCGGGGG-TCCS
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEeccchhc------------ccccCCEEEECCCCCch-HHhh
Confidence 367777888888889999999999988531 13579999999999887 6555
No 202
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.64 E-value=0.00028 Score=77.25 Aligned_cols=50 Identities=20% Similarity=0.304 Sum_probs=39.6
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 392 LAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 392 L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
+.+.++++|++|+++++|++|.. ++++..|.+ +|+++.+|.||+|+|...
T Consensus 242 l~~~l~~~GV~i~~~~~v~~i~~-~~~v~~v~~-~g~~i~~D~Vi~a~G~~p 291 (490)
T 2bc0_A 242 MAKNMEEHGIQLAFGETVKEVAG-NGKVEKIIT-DKNEYDVDMVILAVGFRP 291 (490)
T ss_dssp HHHHHHTTTCEEEETCCEEEEEC-SSSCCEEEE-SSCEEECSEEEECCCEEE
T ss_pred HHHHHHhCCeEEEeCCEEEEEEc-CCcEEEEEE-CCcEEECCEEEECCCCCc
Confidence 44556788999999999999986 455545666 677899999999999543
No 203
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.64 E-value=2.2e-05 Score=85.44 Aligned_cols=56 Identities=20% Similarity=0.307 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEEC-CC--cEEEcCEEEECCChh
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLS-DG--REFYAKTIISNATRW 442 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~-~G--~~i~ad~VV~a~g~~ 442 (658)
..+.+.+.+.++++|++++++++|++|..+++++. |++. +| +++.+|.||+|+|..
T Consensus 212 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~-v~~~~~g~~~~~~~D~vv~a~G~~ 270 (464)
T 2a8x_A 212 ADVSKEIEKQFKKLGVTILTATKVESIADGGSQVT-VTVTKDGVAQELKAEKVLQAIGFA 270 (464)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEE-EEEESSSCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEE-EEEEcCCceEEEEcCEEEECCCCC
Confidence 46778888999999999999999999987665543 6554 66 578999999999954
No 204
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.63 E-value=2.9e-05 Score=85.30 Aligned_cols=40 Identities=45% Similarity=0.639 Sum_probs=36.5
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCccee
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (658)
++||+|||||++|+++|..|++.|++|+|+|++ ..||.|.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c~ 41 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTCV 41 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCcccc
Confidence 489999999999999999999999999999998 4787664
No 205
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.63 E-value=9.5e-06 Score=76.20 Aligned_cols=117 Identities=9% Similarity=0.015 Sum_probs=66.2
Q ss_pred CCce-EEEEEeccc-cchhcccChhhhHHHHHHHHHHHHHHHHHhhC-CCCcCcEEEE--EecChhHHHHHhcCCCCccc
Q 006176 523 EGHH-ILHIFTICS-IEDWEGLAQKDYDAKKELVADEIINRLENKLF-PGLKQSIAFR--EIGSPKTHRRYLARDQGTYG 597 (658)
Q Consensus 523 ~G~~-~l~~~~~~~-~~~w~~l~~~~~~~~ke~~~~~il~~L~~~~~-P~l~~~i~~~--~~~tP~~~~~~~~~~~G~yg 597 (658)
+|.. ++..++..+ ...|..++ ++++.+.++++|. ++| |+. ..+... .+ .+|.+ .....|+|.
T Consensus 33 ~g~~~~L~~~~~g~~A~~~~~l~-------~~e~~~~~l~~L~-~~~g~~~-~~~~~~~~~~---~~W~~-dp~~~Ga~s 99 (181)
T 2e1m_C 33 TQGGVVLAAYSWSDDAARWDSFD-------DAERYGYALENLQ-SVHGRRI-EVFYTGAGQT---QSWLR-DPYACGEAA 99 (181)
T ss_dssp CSCEEEEEEEEEHHHHHHHTTSC-------TTTTHHHHHHHHH-HHHCGGG-GGTEEEEEEE---EESSS-CTTTSSSEE
T ss_pred CCCCEEEEEEcCChHHHHHHcCC-------HHHHHHHHHHHHH-HHhCCCc-HhhccCccee---cccCC-CCCCCCccc
Confidence 4543 555555432 34454443 3567788889998 777 665 322111 10 11211 112246665
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcEEEeCCCccCC-CChhHHhhhHHHHHHHHHHHhccc
Q 006176 598 PMPRGTPKGLLGMPFNTTGINGLYCVGDSCFPG-QGVIAVAFSGVMCAHRVAADIGNR 654 (658)
Q Consensus 598 ~~p~~~~~~~~~~p~~~t~i~gLylaG~~~~pG-~Gv~ga~~sG~~aA~~Il~~lg~~ 654 (658)
..+.+.... ..+..+.++++|||||+.|... +.|+||+.||++||++|++.++..
T Consensus 100 ~~~pg~~~~--~~~~l~~p~grl~FAGe~ts~~~g~~eGAl~SG~raA~~i~~~l~~~ 155 (181)
T 2e1m_C 100 VYTPHQMTA--FHLDVVRPEGPVYFAGEHVSLKHAWIEGAVETAVRAAIAVNEAPVGD 155 (181)
T ss_dssp CCCTTHHHH--HHHHHHSCBTTEEECSGGGTTSTTSHHHHHHHHHHHHHHHHTCCC--
T ss_pred CcCCCchHH--HHHHHhCCCCcEEEEEHHHcCCccCHHHHHHHHHHHHHHHHHHhccC
Confidence 433221100 0122235678999999998532 469999999999999999988643
No 206
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.62 E-value=2.5e-05 Score=85.03 Aligned_cols=40 Identities=45% Similarity=0.585 Sum_probs=36.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCccee
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (658)
++||+|||||++|+++|..|++.|++|+|+|+.. .||.+.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~ 45 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCL 45 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCC
Confidence 5899999999999999999999999999999987 787654
No 207
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.62 E-value=0.00031 Score=76.57 Aligned_cols=35 Identities=29% Similarity=0.320 Sum_probs=32.3
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
..+++|||+|..|+-+|..|++.|.+|+|+|+.+.
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 217 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQ 217 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 36899999999999999999999999999999764
No 208
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.61 E-value=3.9e-05 Score=86.46 Aligned_cols=41 Identities=29% Similarity=0.408 Sum_probs=37.5
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCcce
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSS 196 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~ 196 (658)
..+||+|||+|++|+++|+.|+++|++|+|+|+....||.+
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 46899999999999999999999999999999999888744
No 209
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.59 E-value=0.00032 Score=76.60 Aligned_cols=51 Identities=12% Similarity=0.025 Sum_probs=40.7
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECC----CcEEEcCEEEECCChhH
Q 006176 392 LAKGLADKGSEILYKANVTKVILEQGKAVGVRLSD----GREFYAKTIISNATRWD 443 (658)
Q Consensus 392 L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~----G~~i~ad~VV~a~g~~~ 443 (658)
+.+.++++|++|+++++|++|..+++.+ .|++.+ |+++.+|.||+|+|...
T Consensus 232 l~~~l~~~gV~i~~~~~v~~i~~~~~~~-~v~~~~~~~~g~~~~~D~vv~a~G~~p 286 (482)
T 1ojt_A 232 WQKQNEYRFDNIMVNTKTVAVEPKEDGV-YVTFEGANAPKEPQRYDAVLVAAGRAP 286 (482)
T ss_dssp HHHHHGGGEEEEECSCEEEEEEEETTEE-EEEEESSSCCSSCEEESCEEECCCEEE
T ss_pred HHHHHHhcCCEEEECCEEEEEEEcCCeE-EEEEeccCCCceEEEcCEEEECcCCCc
Confidence 3455677899999999999998776654 477766 77799999999999553
No 210
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.58 E-value=0.0004 Score=76.58 Aligned_cols=35 Identities=14% Similarity=0.190 Sum_probs=32.4
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (658)
.+++|||+|..|+-+|..|++.|.+|+++|+.+.+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~ 249 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPL 249 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcc
Confidence 67999999999999999999999999999997643
No 211
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.53 E-value=0.00081 Score=74.88 Aligned_cols=50 Identities=16% Similarity=0.293 Sum_probs=40.8
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEe-------------------CCEEEEEEECCCcEEEcCEEEECCChh
Q 006176 392 LAKGLADKGSEILYKANVTKVILE-------------------QGKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 392 L~~~l~~~G~~I~~~~~V~~I~~~-------------------~~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
+.+.+++.|+++++++.|++|..+ ++++. +.+.+|+++.+|.||+|+|..
T Consensus 198 l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~g~~i~~D~vi~a~G~~ 266 (565)
T 3ntd_A 198 AHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLS-LTLSNGELLETDLLIMAIGVR 266 (565)
T ss_dssp HHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEE-EEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEE-EEEcCCCEEEcCEEEECcCCc
Confidence 445567889999999999999873 55554 677889899999999999954
No 212
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.51 E-value=0.00074 Score=73.87 Aligned_cols=50 Identities=22% Similarity=0.300 Sum_probs=42.6
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChh
Q 006176 392 LAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 392 L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
+.+.++++|++++++++|++|..+++++ .|++.+|+++.+|.||+|+|..
T Consensus 232 ~~~~l~~~GV~v~~~~~V~~i~~~~~~~-~v~l~dG~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 232 TMEKVRREGVKVMPNAIVQSVGVSSGKL-LIKLKDGRKVETDHIVAAVGLE 281 (493)
T ss_dssp HHHHHHTTTCEEECSCCEEEEEEETTEE-EEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHhcCCEEEeCCEEEEEEecCCeE-EEEECCCCEEECCEEEECCCCC
Confidence 3455678899999999999998777765 5889999999999999999954
No 213
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.51 E-value=7.3e-05 Score=77.72 Aligned_cols=37 Identities=27% Similarity=0.207 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCc
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGG 194 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg 194 (658)
+||+|||||++|+.||+.|+++|++|+|+|++...+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~t 38 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMT 38 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCC
Confidence 6899999999999999999999999999999876544
No 214
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.51 E-value=0.00059 Score=74.25 Aligned_cols=35 Identities=26% Similarity=0.259 Sum_probs=32.5
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (658)
.+++|||+|..|+-+|..|++.|.+|+|+|+.+.+
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 213 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHV 213 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCcc
Confidence 67999999999999999999999999999998654
No 215
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.50 E-value=0.00066 Score=73.62 Aligned_cols=36 Identities=22% Similarity=0.220 Sum_probs=32.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (658)
..+++|||+|..|+-+|..|++.|.+|+|+|+.+.+
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 206 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRA 206 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 368999999999999999999999999999997643
No 216
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.49 E-value=0.00051 Score=74.39 Aligned_cols=36 Identities=28% Similarity=0.271 Sum_probs=32.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (658)
..+++|||+|.+|+-+|..|++.|.+|+|+|+.+.+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERI 206 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 357999999999999999999999999999998654
No 217
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.48 E-value=0.00066 Score=74.02 Aligned_cols=50 Identities=16% Similarity=0.119 Sum_probs=39.2
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChhH
Q 006176 392 LAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRWD 443 (658)
Q Consensus 392 L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~~ 443 (658)
+.+.++++|++|+++++|++|..+ +++..|.+.+ .++.+|.||+|+|...
T Consensus 233 l~~~l~~~Gv~i~~~~~v~~i~~~-~~v~~v~~~~-~~i~~D~vi~a~G~~p 282 (480)
T 3cgb_A 233 IYKEADKHHIEILTNENVKAFKGN-ERVEAVETDK-GTYKADLVLVSVGVKP 282 (480)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEES-SBEEEEEETT-EEEECSEEEECSCEEE
T ss_pred HHHHHHHcCcEEEcCCEEEEEEcC-CcEEEEEECC-CEEEcCEEEECcCCCc
Confidence 445567789999999999999865 5566676654 4799999999999653
No 218
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.46 E-value=0.00083 Score=72.92 Aligned_cols=51 Identities=10% Similarity=0.194 Sum_probs=38.5
Q ss_pred HHHHH-HHcCcEEEeCceeeEEEEeCCEEEEEEEC--CC--cEEEcCEEEECCChhH
Q 006176 392 LAKGL-ADKGSEILYKANVTKVILEQGKAVGVRLS--DG--REFYAKTIISNATRWD 443 (658)
Q Consensus 392 L~~~l-~~~G~~I~~~~~V~~I~~~~~~v~gV~~~--~G--~~i~ad~VV~a~g~~~ 443 (658)
+.+.+ +++|++|+++++|++|..+++++ .|++. +| +++.+|.||+|+|...
T Consensus 221 l~~~l~~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~~~g~~~~i~~D~vv~a~G~~p 276 (468)
T 2qae_A 221 LVGALAKNEKMKFMTSTKVVGGTNNGDSV-SLEVEGKNGKRETVTCEALLVSVGRRP 276 (468)
T ss_dssp HHHHHHHHTCCEEECSCEEEEEEECSSSE-EEEEECC---EEEEEESEEEECSCEEE
T ss_pred HHHHHhhcCCcEEEeCCEEEEEEEcCCeE-EEEEEcCCCceEEEECCEEEECCCccc
Confidence 44556 78899999999999998766554 36655 66 5799999999999543
No 219
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.43 E-value=7.3e-05 Score=88.55 Aligned_cols=41 Identities=37% Similarity=0.598 Sum_probs=39.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCccee
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSSG 197 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg~~~ 197 (658)
.+||+|||+|++|++||..|++.|++|+|+|+.+.+||.+.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 58999999999999999999999999999999999999876
No 220
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.42 E-value=7.7e-05 Score=83.86 Aligned_cols=57 Identities=16% Similarity=0.196 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEe------C---CEEE-EEEECCCcEEE--cCEEEECCChh
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILE------Q---GKAV-GVRLSDGREFY--AKTIISNATRW 442 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~------~---~~v~-gV~~~~G~~i~--ad~VV~a~g~~ 442 (658)
..+.+.+.+.++++|+++++++.|++|... + +++. .+...+|+++. +|.||+|+|..
T Consensus 326 ~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~ 394 (598)
T 2x8g_A 326 QQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGRE 394 (598)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCc
Confidence 467788888999999999999988888642 2 4432 23346787665 99999999954
No 221
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.42 E-value=8.2e-05 Score=80.60 Aligned_cols=41 Identities=29% Similarity=0.332 Sum_probs=38.0
Q ss_pred CccEEEECCChhHHHHHHHHHH-c------CCeEEEEecCCCCCccee
Q 006176 157 DYDAIVIGSGIGGLVAATQLAV-K------GARVLVLEKYVIPGGSSG 197 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~-~------g~~v~~~e~~~~~gg~~~ 197 (658)
.+||+|||||++|+++|..|++ . |++|+|+|+.+.+||.++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 5799999999999999999999 7 999999999988998764
No 222
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.42 E-value=0.0011 Score=71.87 Aligned_cols=35 Identities=31% Similarity=0.369 Sum_probs=32.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
..+++|||+|..|+-+|..|++.|.+|+++|+.+.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 210 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTL 210 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCc
Confidence 35799999999999999999999999999998764
No 223
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.37 E-value=0.0014 Score=71.70 Aligned_cols=50 Identities=22% Similarity=0.276 Sum_probs=39.5
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECC---C--cEEEcCEEEECCChh
Q 006176 392 LAKGLADKGSEILYKANVTKVILEQGKAVGVRLSD---G--REFYAKTIISNATRW 442 (658)
Q Consensus 392 L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~---G--~~i~ad~VV~a~g~~ 442 (658)
+.+.+++.|++|+++++|++|..+++.+. |++.+ | +++.+|.||+|+|..
T Consensus 245 l~~~l~~~gV~v~~~~~v~~i~~~~~~~~-v~~~~~~~g~~~~i~~D~Vi~a~G~~ 299 (491)
T 3urh_A 245 LQRMLTKQGIDFKLGAKVTGAVKSGDGAK-VTFEPVKGGEATTLDAEVVLIATGRK 299 (491)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEETTEEE-EEEEETTSCCCEEEEESEEEECCCCE
T ss_pred HHHHHHhCCCEEEECCeEEEEEEeCCEEE-EEEEecCCCceEEEEcCEEEEeeCCc
Confidence 44556778999999999999998877654 55542 5 579999999999954
No 224
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.37 E-value=0.00064 Score=73.84 Aligned_cols=51 Identities=18% Similarity=0.229 Sum_probs=39.0
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEEC---CC--cEEEcCEEEECCChhH
Q 006176 392 LAKGLADKGSEILYKANVTKVILEQGKAVGVRLS---DG--REFYAKTIISNATRWD 443 (658)
Q Consensus 392 L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~---~G--~~i~ad~VV~a~g~~~ 443 (658)
+.+.+++.|++|+++++|++|..+++++ .|++. +| +++.+|.||+|+|...
T Consensus 224 l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~~~~g~~~~~~~D~vv~a~G~~p 279 (470)
T 1dxl_A 224 FQRSLEKQGMKFKLKTKVVGVDTSGDGV-KLTVEPSAGGEQTIIEADVVLVSAGRTP 279 (470)
T ss_dssp HHHHHHHSSCCEECSEEEEEEECSSSSE-EEEEEESSSCCCEEEEESEEECCCCEEE
T ss_pred HHHHHHHcCCEEEeCCEEEEEEEcCCeE-EEEEEecCCCcceEEECCEEEECCCCCc
Confidence 4455678899999999999998766544 35554 45 5799999999999653
No 225
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.37 E-value=0.00043 Score=72.67 Aligned_cols=34 Identities=35% Similarity=0.476 Sum_probs=31.5
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
.+++|||+|..|+-+|..|++.|.+|+++|+.+.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 177 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAM 177 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCe
Confidence 5799999999999999999999999999998753
No 226
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.34 E-value=0.0011 Score=72.26 Aligned_cols=33 Identities=27% Similarity=0.281 Sum_probs=30.5
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKY 189 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~ 189 (658)
..+++|||+|..|+-+|..|++.|.+|+++++.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 219 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS 219 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 357999999999999999999999999999974
No 227
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.33 E-value=0.00015 Score=78.39 Aligned_cols=54 Identities=17% Similarity=0.189 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChh
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
..+.+.+.+.++++ +++++++.|++|..++ ++..| ..+|+++.+|.||+|+|..
T Consensus 190 ~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~-~v~~v-~~~g~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 190 KEVTDILEEKLKKH-VNLRLQEITMKIEGEE-RVEKV-VTDAGEYKAELVILATGIK 243 (449)
T ss_dssp HHHHHHHHHHHTTT-SEEEESCCEEEEECSS-SCCEE-EETTEEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHhC-cEEEeCCeEEEEeccC-cEEEE-EeCCCEEECCEEEEeeCCc
Confidence 46778888888888 9999999999997654 44434 4467789999999999954
No 228
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.30 E-value=0.00016 Score=78.44 Aligned_cols=42 Identities=31% Similarity=0.390 Sum_probs=37.8
Q ss_pred CCccEEEECCChhHHHHHHHHHHcC--CeEEEEecCCCCCccee
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKG--ARVLVLEKYVIPGGSSG 197 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g--~~v~~~e~~~~~gg~~~ 197 (658)
..+||+|||+|++|+.+|..|++.| ++|+|+|+.+.+||...
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~ 48 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR 48 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee
Confidence 3579999999999999999999998 99999999998888654
No 229
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.30 E-value=0.00015 Score=80.46 Aligned_cols=57 Identities=16% Similarity=0.159 Sum_probs=45.4
Q ss_pred HHHHHHHHHH-cCcEEEeCceeeEEEEeCCEEEEEEECC---Cc--EE---EcCEEEECCChhHHH
Q 006176 389 AKSLAKGLAD-KGSEILYKANVTKVILEQGKAVGVRLSD---GR--EF---YAKTIISNATRWDTF 445 (658)
Q Consensus 389 ~~~L~~~l~~-~G~~I~~~~~V~~I~~~~~~v~gV~~~~---G~--~i---~ad~VV~a~g~~~~~ 445 (658)
..++.+.+.+ .|++|++++.|++|..+++++++|++.+ |+ ++ .++.||+|+|.+.+.
T Consensus 198 ~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp 263 (546)
T 1kdg_A 198 VATYLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTS 263 (546)
T ss_dssp HHTHHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHH
T ss_pred HHHHHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCH
Confidence 3445555555 5899999999999999989999999865 64 33 789999999998653
No 230
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.29 E-value=0.0016 Score=71.16 Aligned_cols=36 Identities=25% Similarity=0.247 Sum_probs=33.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (658)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+.+
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 209 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSV 209 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcc
Confidence 468999999999999999999999999999998654
No 231
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.26 E-value=0.00092 Score=68.67 Aligned_cols=43 Identities=12% Similarity=0.139 Sum_probs=36.8
Q ss_pred cCcEEEeCceeeEEEEeCCEEEEEEECC-----CcEEEcCEEEECCCh
Q 006176 399 KGSEILYKANVTKVILEQGKAVGVRLSD-----GREFYAKTIISNATR 441 (658)
Q Consensus 399 ~G~~I~~~~~V~~I~~~~~~v~gV~~~~-----G~~i~ad~VV~a~g~ 441 (658)
.|++++++++|++|..+++++.+|++.+ ++++.+|.||+|+|.
T Consensus 222 ~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 269 (338)
T 3itj_A 222 EKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGH 269 (338)
T ss_dssp TTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCE
T ss_pred CCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCC
Confidence 4899999999999998887777788765 457999999999984
No 232
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.25 E-value=0.0045 Score=68.45 Aligned_cols=36 Identities=19% Similarity=0.206 Sum_probs=33.0
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
...+|+|||+|.+|+-+|..|++.+.+|+|+++.+.
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 346899999999999999999999999999999864
No 233
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.24 E-value=0.00016 Score=77.64 Aligned_cols=53 Identities=19% Similarity=0.209 Sum_probs=41.1
Q ss_pred ChHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECC----CcEEEcCEEEECCCh
Q 006176 384 GVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSD----GREFYAKTIISNATR 441 (658)
Q Consensus 384 G~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~----G~~i~ad~VV~a~g~ 441 (658)
+...+.+.+.+.++++|++++++++|++|.. +. |++.+ |+++.+|.||+++|.
T Consensus 198 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~v~~--~~---v~~~~~~~~g~~i~~D~vv~a~G~ 254 (430)
T 3h28_A 198 GIGASKRLVEDLFAERNIDWIANVAVKAIEP--DK---VIYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp CSTTHHHHHHHHHHHTTCEEECSCEEEEECS--SE---EEEECTTSCEEEEECSEEEEECEE
T ss_pred cchHHHHHHHHHHHHCCCEEEeCCEEEEEeC--Ce---EEEEecCCCceEEeeeEEEECCCC
Confidence 3345677888999999999999999999853 33 33444 678999999998773
No 234
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.23 E-value=0.0014 Score=68.24 Aligned_cols=47 Identities=17% Similarity=0.157 Sum_probs=39.3
Q ss_pred HHHcCcEEEeCceeeEEEEeCCEEEEEEEC--CC--cEEEcCEEEECCChh
Q 006176 396 LADKGSEILYKANVTKVILEQGKAVGVRLS--DG--REFYAKTIISNATRW 442 (658)
Q Consensus 396 l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~--~G--~~i~ad~VV~a~g~~ 442 (658)
+++.|++++++++|++|..+++++.+|++. +| +++.+|.||+|+|..
T Consensus 212 ~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 212 RANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp HHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBC
T ss_pred hhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCC
Confidence 456789999999999999888887777774 77 578999999999943
No 235
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.19 E-value=0.0053 Score=67.78 Aligned_cols=36 Identities=25% Similarity=0.207 Sum_probs=33.1
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
...+|+|||+|.+|+-+|..|++.|.+|+|+++.+.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 357899999999999999999999999999999865
No 236
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.17 E-value=0.0015 Score=66.78 Aligned_cols=45 Identities=16% Similarity=0.242 Sum_probs=36.6
Q ss_pred HHcCcEEEeCceeeEEEEeCCEEEEEEEC---CCc--EEEcCEEEECCCh
Q 006176 397 ADKGSEILYKANVTKVILEQGKAVGVRLS---DGR--EFYAKTIISNATR 441 (658)
Q Consensus 397 ~~~G~~I~~~~~V~~I~~~~~~v~gV~~~---~G~--~i~ad~VV~a~g~ 441 (658)
.+.|++++++++|++|..+++++.+|++. +|+ ++.+|.||+|+|.
T Consensus 201 ~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 201 KKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp HHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCE
T ss_pred hcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCC
Confidence 35689999999999998776656677775 675 6899999999984
No 237
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.15 E-value=0.00031 Score=74.91 Aligned_cols=43 Identities=21% Similarity=0.143 Sum_probs=35.5
Q ss_pred HHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChh
Q 006176 397 ADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 397 ~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
.+.|++++++++|+.|..++.. |++.+|+++.+|++|+|+|..
T Consensus 70 ~~~~v~~~~~~~v~~i~~~~~~---v~~~~g~~~~~d~lviAtG~~ 112 (408)
T 2gqw_A 70 RAPEVEWLLGVTAQSFDPQAHT---VALSDGRTLPYGTLVLATGAA 112 (408)
T ss_dssp TSCSCEEEETCCEEEEETTTTE---EEETTSCEEECSEEEECCCEE
T ss_pred HHCCCEEEcCCEEEEEECCCCE---EEECCCCEEECCEEEECCCCC
Confidence 3458899999999999876553 567888889999999999964
No 238
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.15 E-value=0.0024 Score=69.74 Aligned_cols=33 Identities=21% Similarity=0.238 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+++|||+|..|+-.|..|++.|.+|+++++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 218 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSI 218 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc
Confidence 469999999999999999999999999999853
No 239
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.14 E-value=0.0022 Score=65.88 Aligned_cols=48 Identities=10% Similarity=0.000 Sum_probs=37.8
Q ss_pred HHHHHcCcEEEeCceeeEEEEeCCEEEEEEEC---CC--cEEEcCEEEECCChh
Q 006176 394 KGLADKGSEILYKANVTKVILEQGKAVGVRLS---DG--REFYAKTIISNATRW 442 (658)
Q Consensus 394 ~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~---~G--~~i~ad~VV~a~g~~ 442 (658)
+.+++.|+++++++.|++|..+ +++.+|++. +| +++.+|.||+|+|..
T Consensus 199 ~~l~~~gv~v~~~~~v~~i~~~-~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2zbw_A 199 KAHEEGRLEVLTPYELRRVEGD-ERVRWAVVFHNQTQEELALEVDAVLILAGYI 251 (335)
T ss_dssp HHHHTTSSEEETTEEEEEEEES-SSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred hccccCCeEEecCCcceeEccC-CCeeEEEEEECCCCceEEEecCEEEEeecCC
Confidence 3456779999999999999874 555567765 67 578999999999954
No 240
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.14 E-value=0.003 Score=68.69 Aligned_cols=35 Identities=14% Similarity=0.215 Sum_probs=32.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
..+++|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 221 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDK 221 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCc
Confidence 36799999999999999999999999999998764
No 241
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.14 E-value=0.0003 Score=75.92 Aligned_cols=36 Identities=31% Similarity=0.298 Sum_probs=32.8
Q ss_pred ccEEEECCChhHHHHHHHHHHc--CCeEEEEecCCCCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVK--GARVLVLEKYVIPG 193 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~--g~~v~~~e~~~~~g 193 (658)
+||+|||||++|+++|..|++. |++|+|+|+.+..|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccC
Confidence 4899999999999999999998 99999999987643
No 242
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.13 E-value=0.00032 Score=76.76 Aligned_cols=36 Identities=11% Similarity=0.227 Sum_probs=33.3
Q ss_pred CccEEEECCChhHHHHHHHHHHcC---CeEEEEecCCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKG---ARVLVLEKYVIP 192 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g---~~v~~~e~~~~~ 192 (658)
++||+|||||++|+++|..|++.| .+|+|+|+....
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~ 73 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNI 73 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCC
Confidence 589999999999999999999988 999999998754
No 243
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.11 E-value=0.0031 Score=63.98 Aligned_cols=44 Identities=9% Similarity=0.051 Sum_probs=36.4
Q ss_pred HcCcEEEeCceeeEEEEeCCEEEEEEEC---CCc--EEEcCEEEECCCh
Q 006176 398 DKGSEILYKANVTKVILEQGKAVGVRLS---DGR--EFYAKTIISNATR 441 (658)
Q Consensus 398 ~~G~~I~~~~~V~~I~~~~~~v~gV~~~---~G~--~i~ad~VV~a~g~ 441 (658)
+.|++++++++|++|..+++++.+|++. +|+ ++.+|.||+|+|.
T Consensus 191 ~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 191 NDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp CTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred CCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecC
Confidence 3589999999999998876777667775 675 6899999999984
No 244
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.10 E-value=0.0019 Score=69.44 Aligned_cols=46 Identities=9% Similarity=0.140 Sum_probs=37.8
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChh
Q 006176 392 LAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 392 L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
+.+.++++|+++++++.|+++. ++. |.+.+|+++.+|.||+|+|..
T Consensus 194 ~~~~l~~~gV~i~~~~~v~~~~--~~~---v~~~~g~~~~~D~vl~a~G~~ 239 (437)
T 4eqs_A 194 ILDELDKREIPYRLNEEINAIN--GNE---ITFKSGKVEHYDMIIEGVGTH 239 (437)
T ss_dssp HHHHHHHTTCCEEESCCEEEEE--TTE---EEETTSCEEECSEEEECCCEE
T ss_pred HHHHhhccceEEEeccEEEEec--CCe---eeecCCeEEeeeeEEEEecee
Confidence 4455678899999999999874 433 668999999999999999954
No 245
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.09 E-value=0.00038 Score=76.23 Aligned_cols=39 Identities=26% Similarity=0.410 Sum_probs=34.4
Q ss_pred CCCccEEEECCChhHHHHHHHHHHc--CCeEEEEecCCCCC
Q 006176 155 ADDYDAIVIGSGIGGLVAATQLAVK--GARVLVLEKYVIPG 193 (658)
Q Consensus 155 ~~~~~~~iiG~g~~g~~~a~~l~~~--g~~v~~~e~~~~~g 193 (658)
+.++||+|||||++|++||..|+++ |.+|+|+|+.+..+
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 3568999999999999999999887 89999999987653
No 246
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.07 E-value=0.00021 Score=79.04 Aligned_cols=54 Identities=22% Similarity=0.209 Sum_probs=42.1
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEeCC---EEEEEEEC--CCcE--E---EcCEEEECCChhHHH
Q 006176 392 LAKGLADKGSEILYKANVTKVILEQG---KAVGVRLS--DGRE--F---YAKTIISNATRWDTF 445 (658)
Q Consensus 392 L~~~l~~~G~~I~~~~~V~~I~~~~~---~v~gV~~~--~G~~--i---~ad~VV~a~g~~~~~ 445 (658)
+.+.+++.|++|++++.|++|..+++ ++++|++. +|++ + .++.||+|+|.+.+.
T Consensus 200 ~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp 263 (536)
T 1ju2_A 200 LLNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTP 263 (536)
T ss_dssp GGGGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHH
T ss_pred hhhhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCH
Confidence 33444667999999999999998863 89999885 4653 4 468999999988654
No 247
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.03 E-value=0.0027 Score=64.39 Aligned_cols=43 Identities=26% Similarity=0.328 Sum_probs=35.1
Q ss_pred cCcEEEeCceeeEEEEeCCEEEEEEECC---Cc--EEEcCEEEECCCh
Q 006176 399 KGSEILYKANVTKVILEQGKAVGVRLSD---GR--EFYAKTIISNATR 441 (658)
Q Consensus 399 ~G~~I~~~~~V~~I~~~~~~v~gV~~~~---G~--~i~ad~VV~a~g~ 441 (658)
.|++++++++|++|..+++++.+|++.+ |+ ++.+|.||+|+|.
T Consensus 193 ~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 193 KNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp TTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred CCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 4889999999999987777776777753 54 6889999999884
No 248
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.02 E-value=0.00039 Score=73.39 Aligned_cols=34 Identities=18% Similarity=0.292 Sum_probs=30.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcC--CeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKG--ARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g--~~v~~~e~~~ 190 (658)
++||+|||||++|++||..|++.| .+|+|+|++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 589999999999999999999999 5699999864
No 249
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.01 E-value=0.0038 Score=65.00 Aligned_cols=50 Identities=12% Similarity=0.124 Sum_probs=38.9
Q ss_pred HHHHHHHcC-cEEEeCceeeEEEEeCCEEEEEEECCCcEEE-cCEEEECCChh
Q 006176 392 LAKGLADKG-SEILYKANVTKVILEQGKAVGVRLSDGREFY-AKTIISNATRW 442 (658)
Q Consensus 392 L~~~l~~~G-~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~-ad~VV~a~g~~ 442 (658)
+.+.+++.| +++++++.|++|..+++.+ .|++.+|+++. +|.||+|+|..
T Consensus 220 l~~~l~~~g~v~~~~~~~v~~i~~~~~~~-~v~~~~g~~~~~~d~vi~a~G~~ 271 (369)
T 3d1c_A 220 LGNVIKQGARIEMNVHYTVKDIDFNNGQY-HISFDSGQSVHTPHEPILATGFD 271 (369)
T ss_dssp HHHHHHTTCCEEEECSCCEEEEEEETTEE-EEEESSSCCEEESSCCEECCCBC
T ss_pred HHHHHhhCCcEEEecCcEEEEEEecCCce-EEEecCCeEeccCCceEEeeccC
Confidence 444556776 9999999999998766654 47788998765 59999999954
No 250
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.98 E-value=0.00042 Score=72.76 Aligned_cols=51 Identities=14% Similarity=0.188 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChh
Q 006176 386 GGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 386 ~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
..+.+.+.+.++++|++++++++|++|. .+ +|++.+|+ +.+|.||+|+|..
T Consensus 183 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~~---~v~~~~g~-i~~D~vi~a~G~~ 233 (367)
T 1xhc_A 183 EELSNMIKDMLEETGVKFFLNSELLEAN--EE---GVLTNSGF-IEGKVKICAIGIV 233 (367)
T ss_dssp HHHHHHHHHHHHHTTEEEECSCCEEEEC--SS---EEEETTEE-EECSCEEEECCEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEE--ee---EEEECCCE-EEcCEEEECcCCC
Confidence 4677888899999999999999999996 22 36788887 9999999999954
No 251
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=96.94 E-value=0.008 Score=64.85 Aligned_cols=36 Identities=14% Similarity=0.139 Sum_probs=32.2
Q ss_pred CCccEEEECCChhHHHHHHHHHHc--CCeEEEEecCCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVK--GARVLVLEKYVI 191 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~--g~~v~~~e~~~~ 191 (658)
...+|+|||+|.+|+-+|..|++. |.+|+++++...
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~ 263 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA 263 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC
Confidence 357899999999999999999999 899999998764
No 252
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.93 E-value=0.0098 Score=65.75 Aligned_cols=35 Identities=20% Similarity=0.346 Sum_probs=32.6
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
..+|+|||+|.+|+-+|..|++.|.+|+|++|.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 46899999999999999999999999999999864
No 253
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.86 E-value=0.00073 Score=72.71 Aligned_cols=35 Identities=23% Similarity=0.332 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHHHcC--CeEEEEecCCCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKG--ARVLVLEKYVIP 192 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g--~~v~~~e~~~~~ 192 (658)
++|+|||||++|++||..|++.| .+|+|+|+++..
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM 37 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 36999999999999999999988 469999997643
No 254
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.81 E-value=0.0049 Score=66.38 Aligned_cols=36 Identities=22% Similarity=0.315 Sum_probs=32.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (658)
..+++|||+|..|+-+|..|++.|.+|+++|+.+.+
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 183 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERV 183 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 358999999999999999999999999999997643
No 255
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.80 E-value=0.01 Score=66.51 Aligned_cols=32 Identities=31% Similarity=0.319 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKY 189 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~ 189 (658)
.+|+|||+|..|+-+|..|++.|.+|+|+++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 47999999999999999999999999999986
No 256
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=96.77 E-value=0.00093 Score=70.84 Aligned_cols=49 Identities=18% Similarity=0.051 Sum_probs=40.4
Q ss_pred HHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCCh
Q 006176 392 LAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATR 441 (658)
Q Consensus 392 L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~ 441 (658)
+.+.++++|+++++++.|+.+..+++.. .|++.+|+++.+|.||+++|.
T Consensus 208 ~~~~l~~~gi~v~~~~~v~~v~~~~~~~-~v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 208 YGFGTENALIEWHPGPDAAVVKTDTEAM-TVETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp SCTTSTTCSEEEECTTTTCEEEEETTTT-EEEETTSCEEECSEEEECCCE
T ss_pred HHHHHHhcCcEEEeCceEEEEEecccce-EEEcCCCcEEEeeEEEEecCc
Confidence 3345577899999999999998776654 388999999999999998873
No 257
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=96.75 E-value=0.0072 Score=61.74 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=31.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 185 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRD 185 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence 3679999999999999999999999999999864
No 258
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.72 E-value=0.0025 Score=72.72 Aligned_cols=35 Identities=26% Similarity=0.137 Sum_probs=31.6
Q ss_pred CccEEEEC--CChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 157 DYDAIVIG--SGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 157 ~~~~~iiG--~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
..+|+||| +|..|+-+|..|++.|.+|+++++.+.
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~ 559 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQ 559 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccc
Confidence 45799999 999999999999999999999998653
No 259
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=96.69 E-value=0.0061 Score=62.47 Aligned_cols=34 Identities=24% Similarity=0.350 Sum_probs=31.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 192 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 192 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCC
Confidence 4679999999999999999999999999999864
No 260
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.67 E-value=0.0089 Score=60.66 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=31.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|+|||+|..|+-+|..|++.|.+|+++++..
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~ 187 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRD 187 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCC
Confidence 3679999999999999999999999999999864
No 261
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=96.63 E-value=0.018 Score=63.25 Aligned_cols=32 Identities=28% Similarity=0.268 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKY 189 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~ 189 (658)
.+++|||+|..|+-.|..|++.|.+|+|+++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 46999999999999999999999999999974
No 262
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.57 E-value=0.0074 Score=66.33 Aligned_cols=43 Identities=26% Similarity=0.319 Sum_probs=35.2
Q ss_pred cCcEEEeCceeeEEEEeCCEEEEEEECC---Cc--EEEcCEEEECCCh
Q 006176 399 KGSEILYKANVTKVILEQGKAVGVRLSD---GR--EFYAKTIISNATR 441 (658)
Q Consensus 399 ~G~~I~~~~~V~~I~~~~~~v~gV~~~~---G~--~i~ad~VV~a~g~ 441 (658)
.|+++++++.|++|..+++++.+|++.+ |+ ++.+|.||+++|.
T Consensus 404 ~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 451 (521)
T 1hyu_A 404 KNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGL 451 (521)
T ss_dssp TTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCC
Confidence 4889999999999987777777777753 54 5889999999983
No 263
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=96.54 E-value=0.015 Score=62.87 Aligned_cols=35 Identities=26% Similarity=0.398 Sum_probs=32.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
..+++|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 206 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDR 206 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 36799999999999999999999999999998753
No 264
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.53 E-value=0.0015 Score=72.90 Aligned_cols=51 Identities=25% Similarity=0.297 Sum_probs=40.6
Q ss_pred HHHHcCcEEEeCceeeEEEEeC----CEEEEEEEC--CCc--EEEc-CEEEECCChhHHH
Q 006176 395 GLADKGSEILYKANVTKVILEQ----GKAVGVRLS--DGR--EFYA-KTIISNATRWDTF 445 (658)
Q Consensus 395 ~l~~~G~~I~~~~~V~~I~~~~----~~v~gV~~~--~G~--~i~a-d~VV~a~g~~~~~ 445 (658)
...+.|++|++++.|++|..++ ++++||++. +|+ ++.| +.||+|+|...+-
T Consensus 240 ~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp 299 (587)
T 1gpe_A 240 NYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISP 299 (587)
T ss_dssp TTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHH
T ss_pred hhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCH
Confidence 3456689999999999999874 489999874 564 4678 8999999987653
No 265
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=96.48 E-value=0.0061 Score=62.21 Aligned_cols=34 Identities=15% Similarity=0.154 Sum_probs=30.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+++|||+|..|+-+|..|++.|.+|+++++..
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~ 187 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRD 187 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecC
Confidence 3579999999999999999999999999998764
No 266
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=95.80 E-value=0.018 Score=68.16 Aligned_cols=33 Identities=18% Similarity=0.149 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+|+|||+|..|+-+|..|++.|.+|+|+|+.+
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~ 317 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARS 317 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCC
Confidence 579999999999999999999999999999854
No 267
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.29 E-value=0.092 Score=62.47 Aligned_cols=33 Identities=30% Similarity=0.300 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHHHcCC-eEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (658)
.+|+|||||..|+-+|..|++.|. +|+|+++.+
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 489999999999999999999996 899999864
No 268
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.12 E-value=0.028 Score=64.42 Aligned_cols=34 Identities=15% Similarity=0.171 Sum_probs=31.3
Q ss_pred CccEEEEC--CChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIG--SGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG--~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|+||| +|..|+-+|..|++.|.+|+|+++.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 46899999 99999999999999999999999864
No 269
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.06 E-value=0.025 Score=50.99 Aligned_cols=36 Identities=22% Similarity=0.304 Sum_probs=32.4
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
....|+|||+|..|...|..|.+.|++|+++|++..
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 456899999999999999999999999999998643
No 270
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=95.04 E-value=0.61 Score=51.14 Aligned_cols=34 Identities=26% Similarity=0.437 Sum_probs=31.6
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|+|||+|.+|+-.|..|++.|.+|++++|.+
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~ 219 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTP 219 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CCEEEEECCCccHHHHHHHHhhcCceEEEEEcCC
Confidence 4789999999999999999999999999999865
No 271
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.66 E-value=0.044 Score=48.46 Aligned_cols=35 Identities=20% Similarity=0.277 Sum_probs=32.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
+-.++|||.|..|...|..|.+.|++|+++|++..
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 45799999999999999999999999999999753
No 272
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.50 E-value=0.038 Score=48.36 Aligned_cols=33 Identities=24% Similarity=0.343 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+|+|||+|..|...|..|.+.|++|+++|++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999854
No 273
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.29 E-value=0.039 Score=48.67 Aligned_cols=33 Identities=36% Similarity=0.583 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..++|+|+|..|...|..|.++|++|+++|++.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 274
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.18 E-value=0.32 Score=46.56 Aligned_cols=127 Identities=13% Similarity=0.191 Sum_probs=65.5
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCC-------CcceeeEeeCCeEE-c-cccccccCCcCCCch-HHH
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP-------GGSSGYYERDGYTF-D-VGSSVMFGFSDKGNL-NLI 225 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~-------gg~~~t~~~~g~~~-d-~G~~~~~g~~~~~~~-~~~ 225 (658)
....|+|||||-.|...|..|.+.|.+|+|++..... -|... +....|.- | .+...+....+.... ..+
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~-~i~~~~~~~dL~~adLVIaAT~d~~~N~~I 108 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLR-VKRKKVGEEDLLNVFFIVVATNDQAVNKFV 108 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCE-EECSCCCGGGSSSCSEEEECCCCTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcE-EEECCCCHhHhCCCCEEEECCCCHHHHHHH
Confidence 3567999999999999999999999999999875321 11111 11111111 1 122233222222122 223
Q ss_pred HHHHHhcCCceeEeeCCCeEEEEcC-----CCcEEEEcCC------HHHHHHHHHHhCCCcHHHHHHHHH
Q 006176 226 TQALAAVGCEMEVIPDPTTVHFHLP-----NDLSVRVHRE------YSDFVAELTSKFPHEKEGVLAFYG 284 (658)
Q Consensus 226 ~~ll~~lG~~~~~~~~~~~~~~~~~-----~g~~~~~~~~------~~~~~~~l~~~~p~~~~~~~~~~~ 284 (658)
.+..+ .|+.++...++....|.+| ++..+.+.++ .....+.+...+|.....+..+..
T Consensus 109 ~~~ak-~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~G~sP~la~~iR~~ie~~lp~~~~~~~~~~~ 177 (223)
T 3dfz_A 109 KQHIK-NDQLVNMASSFSDGNIQIPAQFSRGRLSLAISTDGASPLLTKRIKEDLSSNYDESYTQYTQFLY 177 (223)
T ss_dssp HHHSC-TTCEEEC-----CCSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHHHSCTHHHHHHHHHH
T ss_pred HHHHh-CCCEEEEeCCcccCeEEEeeEEEeCCEEEEEECCCCCcHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 33333 6776666655554444444 2334444432 224555666777765554444443
No 275
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=94.16 E-value=0.039 Score=57.97 Aligned_cols=35 Identities=26% Similarity=0.298 Sum_probs=32.7
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (658)
.+|+|||+|..|+-+|..|++.|.+|+|+|+.+.+
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYP 181 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 57999999999999999999999999999998765
No 276
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=94.11 E-value=0.038 Score=55.96 Aligned_cols=34 Identities=21% Similarity=0.208 Sum_probs=31.7
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
.+|+|||||..|+-+|..|++.|.+|+|+|+.+.
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 5799999999999999999999999999998764
No 277
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.98 E-value=0.057 Score=45.59 Aligned_cols=34 Identities=24% Similarity=0.333 Sum_probs=30.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcC-CeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKG-ARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g-~~v~~~e~~~ 190 (658)
..+|+|+|+|..|...+..|.+.| ++|++++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 357999999999999999999999 8999999864
No 278
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=93.61 E-value=0.048 Score=55.41 Aligned_cols=34 Identities=29% Similarity=0.344 Sum_probs=30.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|.|||+|..|...|..++.+|++|+++|..+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999864
No 279
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.43 E-value=0.086 Score=47.23 Aligned_cols=33 Identities=27% Similarity=0.322 Sum_probs=30.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKY 189 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~ 189 (658)
+..++|+|+|..|...|..|.+.|++|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 356999999999999999999999999999986
No 280
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=93.19 E-value=0.16 Score=55.93 Aligned_cols=37 Identities=41% Similarity=0.708 Sum_probs=34.4
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (658)
..+|+||||+|++|+++|.+|+++|++|+|+|++...
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 4699999999999999999999999999999998654
No 281
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=93.12 E-value=0.068 Score=53.88 Aligned_cols=34 Identities=24% Similarity=0.412 Sum_probs=31.4
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+++|||+|..|+-+|..|++.|.+|+|+|+..
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 4679999999999999999999999999999754
No 282
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.82 E-value=0.058 Score=57.75 Aligned_cols=37 Identities=24% Similarity=0.521 Sum_probs=33.2
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCCc
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGG 194 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~gg 194 (658)
.+|+|||.|.+|+++|..|+++|++|++.|.....-+
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~ 42 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPG 42 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTT
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcch
Confidence 5799999999999999999999999999998776543
No 283
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.81 E-value=0.11 Score=47.96 Aligned_cols=34 Identities=24% Similarity=0.266 Sum_probs=31.3
Q ss_pred CccEEEECCChhHHHHHHHHHHc-CCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVK-GARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~-g~~v~~~e~~~ 190 (658)
..+|+|||+|..|...|..|.+. |++|+++|++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 45799999999999999999999 99999999865
No 284
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=92.81 E-value=0.11 Score=52.59 Aligned_cols=34 Identities=26% Similarity=0.331 Sum_probs=31.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|.|||+|..|...|..|+++|++|+++|++.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999864
No 285
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=92.69 E-value=0.11 Score=55.78 Aligned_cols=36 Identities=22% Similarity=0.338 Sum_probs=33.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (658)
..+++|||+|..|+-+|..|++.|.+|+|+|+.+.+
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 202 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAP 202 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCch
Confidence 357999999999999999999999999999998754
No 286
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.65 E-value=0.12 Score=55.51 Aligned_cols=34 Identities=32% Similarity=0.286 Sum_probs=31.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|.|||.|.+|+++|..|+++|++|++.|+..
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 4689999999999999999999999999999864
No 287
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=92.53 E-value=0.1 Score=45.63 Aligned_cols=33 Identities=27% Similarity=0.219 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+|+|+|+|..|...|..|.+.|++|+++|++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999853
No 288
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=92.46 E-value=0.14 Score=44.50 Aligned_cols=57 Identities=2% Similarity=-0.174 Sum_probs=43.8
Q ss_pred cEEEcCEEEECCChhHHHhhccCCCCCChHHHHHHHhhccCCceEEEEEeeecCcCCCC
Q 006176 428 REFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPPD 486 (658)
Q Consensus 428 ~~i~ad~VV~a~g~~~~~~~Ll~~~~lp~~~~~~~~~~~~~~s~~~v~l~~~~~~~~~~ 486 (658)
+++.||+||+|+++..+ ..+.-.+.||..+.+.+..+.++. ..++++.+++++|+.+
T Consensus 4 ~~~~Ad~VIvTvP~~vL-~~I~F~P~LP~~k~~Ai~~l~~g~-~~Kv~l~f~~~FW~~~ 60 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSL-RFVKVTPPFSYKKRRAVIETHYDQ-ATKVLLEFSRRWWEFT 60 (130)
T ss_dssp EEEEESEEEECSCHHHH-TTSEEESCCCHHHHHHHHHCCEEC-EEEEEEEESSCGGGCC
T ss_pred eEEEcCEEEEcCCHHHH-hcCcCCCCCCHHHHHHHHhCCCcc-eeEEEEEECCCCCCCC
Confidence 36899999999997664 444434579998888887776554 5699999999998654
No 289
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=92.10 E-value=0.1 Score=53.09 Aligned_cols=34 Identities=29% Similarity=0.344 Sum_probs=31.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|.|||+|..|.+.|..|+++|++|+++|++.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999864
No 290
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.07 E-value=0.13 Score=51.30 Aligned_cols=33 Identities=27% Similarity=0.319 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+|.|||+|..|...|..|+++|++|+++|++.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 579999999999999999999999999999864
No 291
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=91.98 E-value=0.13 Score=55.36 Aligned_cols=35 Identities=26% Similarity=0.204 Sum_probs=32.5
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (658)
.+++|||+|..|+-+|..|++.|.+|+|+|+.+.+
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~ 201 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRL 201 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 57999999999999999999999999999998654
No 292
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=91.64 E-value=0.13 Score=51.53 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=30.9
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+.+|.|||+|..|...|..|+ +|++|+++|++.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4678999999999999999999 999999999864
No 293
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=91.37 E-value=0.17 Score=51.49 Aligned_cols=33 Identities=30% Similarity=0.364 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+|.|||+|..|.+.|..|+++|++|++++|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 579999999999999999999999999999864
No 294
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=91.23 E-value=0.14 Score=48.98 Aligned_cols=32 Identities=19% Similarity=0.275 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 159 DAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 159 ~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
+|+|||+|..|...|..|.++|++|+++|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999999999999864
No 295
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=91.20 E-value=0.26 Score=52.59 Aligned_cols=35 Identities=17% Similarity=0.256 Sum_probs=32.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
-.+|.|||+|..|...|..|+++|++|+++|++..
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 35799999999999999999999999999999764
No 296
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=91.08 E-value=0.18 Score=54.35 Aligned_cols=34 Identities=35% Similarity=0.436 Sum_probs=31.6
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|.|||+|..|+..|..|+++|++|+++|++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 5789999999999999999999999999999854
No 297
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=91.01 E-value=0.23 Score=50.35 Aligned_cols=37 Identities=22% Similarity=0.286 Sum_probs=33.0
Q ss_pred CCCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 155 ADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 155 ~~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
....+|.|||.|..|...|..|++.|++|++++++..
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 3456899999999999999999999999999998753
No 298
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=91.00 E-value=0.24 Score=50.72 Aligned_cols=34 Identities=21% Similarity=0.229 Sum_probs=31.4
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-eEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (658)
..+|+|||+|-.|.+.|..|++.|+ +|+++|...
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 4689999999999999999999998 999999864
No 299
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=90.87 E-value=0.23 Score=47.08 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=31.6
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
..+|.|||+|..|.+.|..|+++|++|++++++..
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 45799999999999999999999999999998754
No 300
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=90.86 E-value=0.18 Score=51.11 Aligned_cols=33 Identities=24% Similarity=0.296 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+|.|||+|-.|.+.|..|+++|++|++++|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 579999999999999999999999999999864
No 301
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=90.83 E-value=0.22 Score=49.61 Aligned_cols=33 Identities=24% Similarity=0.215 Sum_probs=30.6
Q ss_pred cEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 159 DAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 159 ~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
+|.|||+|..|...|..|+++|++|++++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 589999999999999999999999999998753
No 302
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=90.74 E-value=0.23 Score=52.99 Aligned_cols=35 Identities=26% Similarity=0.368 Sum_probs=32.6
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
..++.|||.|..|+..|..|+++|++|+++|++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999999765
No 303
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=90.38 E-value=0.26 Score=51.57 Aligned_cols=34 Identities=26% Similarity=0.314 Sum_probs=31.5
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|+|||+|.+|+.+|..|...|.+|+++|+..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999864
No 304
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=90.34 E-value=0.23 Score=50.04 Aligned_cols=33 Identities=18% Similarity=0.315 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+|.|||+|..|...|..|+++|++|++++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 479999999999999999999999999999853
No 305
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=90.28 E-value=0.27 Score=52.16 Aligned_cols=37 Identities=30% Similarity=0.365 Sum_probs=33.0
Q ss_pred CCCCccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 154 GADDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 154 ~~~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.....++.|||.|..||..|..|+++|++|+.+|-+.
T Consensus 18 ~~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 18 GSHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp TCCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 3455789999999999999999999999999999764
No 306
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=90.12 E-value=0.3 Score=51.56 Aligned_cols=36 Identities=39% Similarity=0.421 Sum_probs=33.3
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (658)
..+++|||+|..|+-+|..|++.|.+|+++|+.+.+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 187 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRV 187 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCch
Confidence 357999999999999999999999999999998765
No 307
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=90.11 E-value=0.3 Score=49.87 Aligned_cols=34 Identities=18% Similarity=-0.012 Sum_probs=30.4
Q ss_pred CccEEEECCChhHHH-HHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLV-AATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~-~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|.|||.|.+|++ +|..|.++|++|++.|+..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 357999999999997 7889999999999999865
No 308
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=90.09 E-value=0.26 Score=52.72 Aligned_cols=36 Identities=19% Similarity=0.142 Sum_probs=32.8
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (658)
..+++|||+|..|+-.|..|++.|.+|+++|+.+.+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 184 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERV 184 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSST
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCch
Confidence 357999999999999999999999999999998754
No 309
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=89.95 E-value=0.27 Score=50.42 Aligned_cols=32 Identities=25% Similarity=0.364 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKY 189 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~ 189 (658)
.+|.|||+|..|.+.|..|+++|++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 57999999999999999999999999999984
No 310
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=89.93 E-value=0.27 Score=50.99 Aligned_cols=34 Identities=26% Similarity=0.340 Sum_probs=31.5
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|+|||+|..|+.+|..|...|.+|+++|++.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 311
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=89.91 E-value=0.29 Score=52.57 Aligned_cols=34 Identities=26% Similarity=0.231 Sum_probs=32.0
Q ss_pred ccEEEECCChhHHHHHHHHHHc-CC-eEEEEecCCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVK-GA-RVLVLEKYVI 191 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~-g~-~v~~~e~~~~ 191 (658)
.+|.|||+|..|+..|..|+++ |+ +|+++|++..
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 5799999999999999999999 99 9999999865
No 312
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=89.87 E-value=0.28 Score=49.79 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=31.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC--eEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (658)
..+|+|||+|-.|...|..|++.|+ +|+++|++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3579999999999999999999999 999999864
No 313
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=89.83 E-value=0.26 Score=50.94 Aligned_cols=34 Identities=26% Similarity=0.272 Sum_probs=31.4
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|.|||+|..|.+.|..|+++|++|++++++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999864
No 314
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=89.79 E-value=0.29 Score=52.63 Aligned_cols=35 Identities=20% Similarity=0.171 Sum_probs=32.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
..+|+|||+|.+|+-.|..|++.|.+|+++++...
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 46799999999999999999999999999998754
No 315
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=89.58 E-value=0.35 Score=50.85 Aligned_cols=37 Identities=32% Similarity=0.284 Sum_probs=33.5
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPG 193 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~g 193 (658)
..+++|||+|..|+-+|..|++.|.+|+++|+.+.+.
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~ 178 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVM 178 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcch
Confidence 3579999999999999999999999999999987653
No 316
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=89.57 E-value=0.34 Score=49.24 Aligned_cols=34 Identities=24% Similarity=0.164 Sum_probs=31.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-eEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (658)
..+|.|||+|..|.+.|..|+++|+ +|+++|+..
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 3579999999999999999999998 999999864
No 317
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=89.53 E-value=0.21 Score=49.44 Aligned_cols=34 Identities=24% Similarity=0.395 Sum_probs=31.4
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
...|+|||+|-.|+..|..|.+.|.+|+|++...
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4679999999999999999999999999999754
No 318
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=89.40 E-value=0.29 Score=52.56 Aligned_cols=34 Identities=26% Similarity=0.191 Sum_probs=31.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|.|||+|..|...|..|+++|++|+++|++.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999864
No 319
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=89.39 E-value=0.29 Score=52.34 Aligned_cols=33 Identities=39% Similarity=0.469 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+|.|||+|..|+..|..|+++|++|+++|++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 479999999999999999999999999999864
No 320
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=89.37 E-value=0.36 Score=46.99 Aligned_cols=35 Identities=26% Similarity=0.267 Sum_probs=31.6
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
...+|.|||+|..|.+.|..|+++|++|++++++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 45789999999999999999999999999999864
No 321
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=89.34 E-value=2.1 Score=45.70 Aligned_cols=128 Identities=21% Similarity=0.243 Sum_probs=70.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCC-------CcceeeEeeCCeEE-cc-ccccccCCcCCC-chHHHH
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP-------GGSSGYYERDGYTF-DV-GSSVMFGFSDKG-NLNLIT 226 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~-------gg~~~t~~~~g~~~-d~-G~~~~~g~~~~~-~~~~~~ 226 (658)
...|+|||+|..|...|..|.+.|.+|+|++..... .|... +....|.- +. +...+.-..+.. ....+.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~-~~~~~~~~~~l~~~~lVi~at~~~~~n~~i~ 90 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLT-LVEGPFDETLLDSCWLAIAATDDDTVNQRVS 90 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCE-EEESSCCGGGGTTCSEEEECCSCHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEE-EEECCCCccccCCccEEEEcCCCHHHHHHHH
Confidence 467999999999999999999999999999974321 01121 22222211 11 223332211111 123466
Q ss_pred HHHHhcCCceeEeeCCCeEEEEcC-----CCcEEEEcCC------HHHHHHHHHHhCCCcHHHHHHHHHH
Q 006176 227 QALAAVGCEMEVIPDPTTVHFHLP-----NDLSVRVHRE------YSDFVAELTSKFPHEKEGVLAFYGE 285 (658)
Q Consensus 227 ~ll~~lG~~~~~~~~~~~~~~~~~-----~g~~~~~~~~------~~~~~~~l~~~~p~~~~~~~~~~~~ 285 (658)
+..++.|+..+...++....+.+| +...+...++ .....+.+...+|.....+..+...
T Consensus 91 ~~a~~~~i~vn~~d~~e~~~~~~pa~~~~~~l~iaIsT~Gksp~la~~ir~~ie~~l~~~~~~~~~~~~~ 160 (457)
T 1pjq_A 91 DAAESRRIFCNVVDAPKAASFIMPSIIDRSPLMVAVSSGGTSPVLARLLREKLESLLPQHLGQVARYAGQ 160 (457)
T ss_dssp HHHHHTTCEEEETTCTTSSSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHHHSCTTHHHHHHHHHH
T ss_pred HHHHHcCCEEEECCCcccCceEeeeEEEeCCeEEEEECCCCChHHHHHHHHHHHHhcchhHHHHHHHHHH
Confidence 677788887655554433333321 2223333322 2345556677777665555544443
No 322
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=89.33 E-value=0.36 Score=52.97 Aligned_cols=36 Identities=19% Similarity=0.206 Sum_probs=32.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (658)
..+++|||||..|+-.|..+++.|.+|+|+++....
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L 258 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL 258 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc
Confidence 357999999999999999999999999999986543
No 323
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=89.24 E-value=0.34 Score=48.85 Aligned_cols=34 Identities=21% Similarity=0.208 Sum_probs=31.3
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|.|||.|..|...|..|+++|++|++++++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999864
No 324
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=89.13 E-value=0.25 Score=49.56 Aligned_cols=33 Identities=18% Similarity=0.255 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+|.|||+|-.|.+.|..|+++|++|++++|+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 479999999999999999999999999999873
No 325
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=89.08 E-value=0.31 Score=49.66 Aligned_cols=35 Identities=29% Similarity=0.266 Sum_probs=32.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
..+|+|||+|..|+-.|..|++.|.+|+++++.+.
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~ 189 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE 189 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc
Confidence 46799999999999999999999999999998754
No 326
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=88.98 E-value=0.36 Score=48.12 Aligned_cols=34 Identities=26% Similarity=0.251 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
.+|.|||.|..|...|..|+++|++|++++++..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4699999999999999999999999999998753
No 327
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=88.91 E-value=0.38 Score=51.43 Aligned_cols=36 Identities=28% Similarity=0.206 Sum_probs=33.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (658)
..+++|||+|..|+-+|..|++.|.+|+++|+.+.+
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 182 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENL 182 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcc
Confidence 367999999999999999999999999999998765
No 328
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=88.86 E-value=0.36 Score=49.35 Aligned_cols=33 Identities=27% Similarity=0.412 Sum_probs=31.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKY 189 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~ 189 (658)
..+|.|||+|..|...|..|+++|++|++++|.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 468999999999999999999999999999985
No 329
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=88.65 E-value=0.41 Score=48.62 Aligned_cols=34 Identities=24% Similarity=0.295 Sum_probs=31.5
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|.|||.|..|...|..|++.|++|++++++.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4589999999999999999999999999999864
No 330
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=88.60 E-value=0.44 Score=48.62 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHHHcCC-eEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (658)
.+|.|||+|..|.+.|..|+..|+ +|+++|...
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 579999999999999999999999 999999864
No 331
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=88.45 E-value=0.38 Score=52.22 Aligned_cols=36 Identities=14% Similarity=0.180 Sum_probs=32.8
Q ss_pred CccEEEECCChhHHHHHHHHHHc---CCeEEEEecCCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVK---GARVLVLEKYVIP 192 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~---g~~v~~~e~~~~~ 192 (658)
..+++|||+|..|+-.|..|++. |.+|+|+|+.+.+
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 229 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLI 229 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcc
Confidence 35899999999999999999999 9999999998754
No 332
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=88.45 E-value=0.47 Score=51.06 Aligned_cols=36 Identities=36% Similarity=0.271 Sum_probs=33.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (658)
..+++|||+|..|+-.|..|++.|.+|+++++.+.+
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 215 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKF 215 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Confidence 457999999999999999999999999999998754
No 333
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=88.36 E-value=0.4 Score=49.34 Aligned_cols=33 Identities=36% Similarity=0.426 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+|.|||+|..|...|..|++.|++|++++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999853
No 334
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=88.35 E-value=0.36 Score=48.14 Aligned_cols=34 Identities=26% Similarity=0.192 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
.+|.|||.|..|...|..|+++|++|++++++..
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 3699999999999999999999999999998753
No 335
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=88.34 E-value=0.18 Score=44.50 Aligned_cols=34 Identities=15% Similarity=0.233 Sum_probs=30.6
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|+|||+|..|...|..|++.|++|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4579999999999999999999999999999863
No 336
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=88.32 E-value=0.39 Score=46.88 Aligned_cols=34 Identities=26% Similarity=0.351 Sum_probs=30.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-eEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (658)
..+|+|||+|-.|..+|..|++.|. +++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 3579999999999999999999998 799999864
No 337
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=88.30 E-value=0.37 Score=48.97 Aligned_cols=32 Identities=22% Similarity=0.361 Sum_probs=29.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKY 189 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~ 189 (658)
..+|.|||+|..|.+.|..|+++|++|+++ ++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 467999999999999999999999999999 64
No 338
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=88.23 E-value=0.38 Score=51.27 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 159 DAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 159 ~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
+|.|||+|..|+..|..|+++|++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999999854
No 339
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=88.22 E-value=0.42 Score=51.75 Aligned_cols=36 Identities=17% Similarity=0.125 Sum_probs=32.9
Q ss_pred CccEEEECCChhHHHHHHHHHHc---CCeEEEEecCCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVK---GARVLVLEKYVIP 192 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~---g~~v~~~e~~~~~ 192 (658)
..+++|||+|..|+-+|..|++. |.+|+|+|+.+.+
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 225 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMI 225 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCc
Confidence 35899999999999999999999 9999999998754
No 340
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=88.15 E-value=0.46 Score=45.16 Aligned_cols=34 Identities=26% Similarity=0.191 Sum_probs=30.5
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|.|||+|..|...|..|++.|++|++++++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999864
No 341
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=87.99 E-value=0.36 Score=51.09 Aligned_cols=34 Identities=21% Similarity=0.245 Sum_probs=30.6
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
..+|.|||+|..|+..|..|++ |++|+++|++..
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 4589999999999999999998 999999998643
No 342
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=87.91 E-value=0.36 Score=48.49 Aligned_cols=35 Identities=23% Similarity=0.129 Sum_probs=32.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
..+|.|||.|..|...|..|+++|++|++++++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 35799999999999999999999999999998764
No 343
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=87.73 E-value=0.6 Score=47.06 Aligned_cols=34 Identities=32% Similarity=0.507 Sum_probs=31.4
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|.|||.|..|...|..|++.|++|++++++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4679999999999999999999999999999864
No 344
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=87.70 E-value=0.36 Score=51.49 Aligned_cols=36 Identities=8% Similarity=-0.073 Sum_probs=32.5
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCe-EEEEecCCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGAR-VLVLEKYVIP 192 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~-v~~~e~~~~~ 192 (658)
..+|+|||+|.+|+-.|..|++.|.+ |+++++....
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 46799999999999999999999999 9999997543
No 345
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=87.70 E-value=0.38 Score=51.92 Aligned_cols=33 Identities=33% Similarity=0.350 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+|.|||+|..|...|..|+++|++|+++|++.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999865
No 346
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=87.68 E-value=0.48 Score=47.60 Aligned_cols=33 Identities=27% Similarity=0.207 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+|.|||.|..|...|..|++.|++|++++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 579999999999999999999999999999864
No 347
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=87.68 E-value=0.61 Score=46.10 Aligned_cols=47 Identities=17% Similarity=0.231 Sum_probs=38.6
Q ss_pred HHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCCh
Q 006176 390 KSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATR 441 (658)
Q Consensus 390 ~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~ 441 (658)
+.+.+.+++.|++++. ++|++|..++ .|++.+|+++.+|.||+++|.
T Consensus 178 ~~~~~~l~~~gv~i~~-~~v~~i~~~~----~v~~~~g~~~~~D~vi~a~G~ 224 (297)
T 3fbs_A 178 ADQHALLAARGVRVET-TRIREIAGHA----DVVLADGRSIALAGLFTQPKL 224 (297)
T ss_dssp HHHHHHHHHTTCEEEC-SCEEEEETTE----EEEETTSCEEEESEEEECCEE
T ss_pred HHHHHHHHHCCcEEEc-ceeeeeecCC----eEEeCCCCEEEEEEEEEccCc
Confidence 4466788899999995 8999986432 578899999999999999984
No 348
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=87.64 E-value=0.49 Score=49.72 Aligned_cols=34 Identities=29% Similarity=0.403 Sum_probs=31.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
...|+|||+|.+|+.+|..|...|.+|+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999864
No 349
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=87.49 E-value=0.52 Score=52.27 Aligned_cols=36 Identities=28% Similarity=0.315 Sum_probs=32.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (658)
..+++|||+|..|+-+|..|++.|.+|+++|+.+.+
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 222 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQV 222 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcc
Confidence 357999999999999999999999999999997754
No 350
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=87.44 E-value=0.56 Score=46.42 Aligned_cols=34 Identities=18% Similarity=0.187 Sum_probs=30.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
...++|+|+|-+|.++|..|++.|.+|+|++|+.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4579999999999999999999999999998863
No 351
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=87.40 E-value=0.61 Score=47.22 Aligned_cols=33 Identities=30% Similarity=0.352 Sum_probs=30.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-eEEEEecC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKY 189 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~ 189 (658)
..+|.|||+|..|.+.|+.|+..|+ +|+++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4679999999999999999999999 99999987
No 352
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=87.38 E-value=0.63 Score=47.35 Aligned_cols=34 Identities=26% Similarity=0.373 Sum_probs=30.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-eEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (658)
..+|.|||+|..|...|..|+..|+ +|+++|...
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 3579999999999999999999998 999999764
No 353
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=87.36 E-value=0.54 Score=50.39 Aligned_cols=36 Identities=19% Similarity=0.201 Sum_probs=31.7
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC-eEEEEecCCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYVI 191 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~~ 191 (658)
...+|+|||+|.+|+-+|..+.+.|. +|+++++...
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 35789999999999999999999998 5999998653
No 354
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=87.31 E-value=0.46 Score=48.40 Aligned_cols=30 Identities=20% Similarity=0.294 Sum_probs=28.8
Q ss_pred cEEEECCChhHHHHHHHHHHcCCeEEEEec
Q 006176 159 DAIVIGSGIGGLVAATQLAVKGARVLVLEK 188 (658)
Q Consensus 159 ~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~ 188 (658)
+|.|||+|..|...|..|+++|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 589999999999999999999999999998
No 355
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=87.27 E-value=0.61 Score=45.98 Aligned_cols=35 Identities=26% Similarity=0.356 Sum_probs=31.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
..+++|||+|-+|.++|+.|++.|.+|+|+.|+..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 56899999999999999999999999999998753
No 356
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=87.26 E-value=0.5 Score=47.69 Aligned_cols=32 Identities=28% Similarity=0.283 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+|.|||+|-.|.+.|..|+ +|++|++++|+.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 57999999999999999999 999999999864
No 357
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=87.20 E-value=0.56 Score=48.98 Aligned_cols=34 Identities=26% Similarity=0.362 Sum_probs=31.3
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|+|||+|.+|+.+|..|...|.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5689999999999999999999999999999864
No 358
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=87.18 E-value=0.25 Score=47.63 Aligned_cols=35 Identities=20% Similarity=0.148 Sum_probs=31.4
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
...+|.|||.|..|.+.|..|+++|++|+++++..
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~~ 39 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAPE 39 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSGG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCHH
Confidence 34689999999999999999999999999998853
No 359
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=87.16 E-value=0.53 Score=47.44 Aligned_cols=32 Identities=25% Similarity=0.485 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHHHcCC--eEEEEecCC
Q 006176 159 DAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (658)
Q Consensus 159 ~~~iiG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (658)
+|+|||+|..|.+.|..|+..|+ +|+++|...
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999999 999999864
No 360
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=87.06 E-value=0.66 Score=46.88 Aligned_cols=34 Identities=24% Similarity=0.254 Sum_probs=31.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|.|||+|..|...|..|++.|++|++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3579999999999999999999999999999864
No 361
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=87.04 E-value=0.55 Score=48.53 Aligned_cols=34 Identities=24% Similarity=0.242 Sum_probs=31.6
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|.|||.|..|...|..|+++|++|++++++.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 362
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=87.02 E-value=0.26 Score=52.97 Aligned_cols=35 Identities=20% Similarity=0.256 Sum_probs=32.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
.++|+|+|+|-.|...|..|...|++|+|+|++..
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 46799999999999999999999999999998753
No 363
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=87.01 E-value=0.5 Score=47.84 Aligned_cols=33 Identities=21% Similarity=0.184 Sum_probs=30.5
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-eEEEEecC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKY 189 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~ 189 (658)
..+|.|||.|..|...|..|++.|+ +|++++++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4689999999999999999999999 99999986
No 364
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=86.97 E-value=0.68 Score=46.47 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=30.7
Q ss_pred ccEEEEC-CChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIG-SGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG-~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+|.||| .|..|.+.|..|++.|++|++++++.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 4799999 99999999999999999999999864
No 365
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=86.88 E-value=0.62 Score=48.24 Aligned_cols=33 Identities=27% Similarity=0.403 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..|+|+|+|.+|+.++..|+..|.+|++++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999999863
No 366
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=86.87 E-value=0.54 Score=50.94 Aligned_cols=36 Identities=25% Similarity=0.242 Sum_probs=33.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (658)
..+++|||+|..|+-.|..|++.|.+|+++|+.+.+
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 217 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHV 217 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 357999999999999999999999999999998765
No 367
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=86.83 E-value=0.44 Score=48.08 Aligned_cols=31 Identities=26% Similarity=0.279 Sum_probs=29.3
Q ss_pred ccEEEECCChhHHHHHHHHHHc-----C-CeEEEEec
Q 006176 158 YDAIVIGSGIGGLVAATQLAVK-----G-ARVLVLEK 188 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~-----g-~~v~~~e~ 188 (658)
.+|.|||+|..|...|..|+++ | ++|++++|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5799999999999999999999 9 99999987
No 368
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=86.47 E-value=0.64 Score=49.96 Aligned_cols=36 Identities=31% Similarity=0.293 Sum_probs=32.9
Q ss_pred CccEEEECCChhHHHHHHHHHHc-CCeEEEEecCCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVK-GARVLVLEKYVIP 192 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~-g~~v~~~e~~~~~ 192 (658)
..+++|||+|..|+-+|..|++. |.+|+++|+.+..
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~ 195 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQI 195 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcc
Confidence 46899999999999999999999 9999999997654
No 369
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=86.42 E-value=0.7 Score=46.96 Aligned_cols=34 Identities=24% Similarity=0.251 Sum_probs=31.3
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-eEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (658)
..+|.|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 4689999999999999999999999 999999865
No 370
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=86.31 E-value=0.51 Score=49.97 Aligned_cols=35 Identities=26% Similarity=0.283 Sum_probs=31.4
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
..+.-|||.|..|+..|..|+++|++|+++|++..
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 35789999999999999999999999999998653
No 371
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=86.24 E-value=0.63 Score=49.12 Aligned_cols=35 Identities=23% Similarity=0.318 Sum_probs=31.8
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
+..|+|||.|..|...|..|.+.|++|+++|++..
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 34699999999999999999999999999998753
No 372
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=86.23 E-value=0.46 Score=50.36 Aligned_cols=37 Identities=24% Similarity=0.416 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHHH--cCCeEEEEecCCCCCc
Q 006176 158 YDAIVIGSGIGGLVAATQLAV--KGARVLVLEKYVIPGG 194 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~--~g~~v~~~e~~~~~gg 194 (658)
+||+|||||++|+++|.+|++ .|++|+|+|+.+..++
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~ 41 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGF 41 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEEC
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCc
Confidence 689999999999999999999 7899999999887654
No 373
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=86.13 E-value=0.42 Score=52.43 Aligned_cols=37 Identities=35% Similarity=0.601 Sum_probs=33.8
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPG 193 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~g 193 (658)
..||+||||+|.+|+++|.+|++ |.+|+|||++...+
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~ 61 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPT 61 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcC
Confidence 45999999999999999999999 99999999987643
No 374
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=86.06 E-value=0.66 Score=46.29 Aligned_cols=36 Identities=19% Similarity=0.210 Sum_probs=32.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (658)
..+++|||+|..|+-+|..|++.|.+|+++++.+..
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 367999999999999999999999999999987654
No 375
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=85.99 E-value=0.68 Score=43.61 Aligned_cols=31 Identities=26% Similarity=0.315 Sum_probs=29.1
Q ss_pred cEEEEC-CChhHHHHHHHHHHcCCeEEEEecC
Q 006176 159 DAIVIG-SGIGGLVAATQLAVKGARVLVLEKY 189 (658)
Q Consensus 159 ~~~iiG-~g~~g~~~a~~l~~~g~~v~~~e~~ 189 (658)
+|.||| +|..|...|..|++.|++|++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 589999 9999999999999999999999985
No 376
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=85.88 E-value=0.62 Score=47.27 Aligned_cols=33 Identities=21% Similarity=0.176 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHHHcC-CeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKG-ARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g-~~v~~~e~~~ 190 (658)
.+|.|||.|..|...|..|+++| ++|++++++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 57999999999999999999999 9999999975
No 377
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=85.84 E-value=0.72 Score=47.75 Aligned_cols=35 Identities=34% Similarity=0.590 Sum_probs=31.9
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC-eEEEEecCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (658)
...+|+|+|+|.+|..+|..|...|. +|+++|+..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 45789999999999999999999999 899999874
No 378
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=85.82 E-value=0.8 Score=47.27 Aligned_cols=34 Identities=21% Similarity=0.298 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
+.|+|||||..|..+|+.+.+.|++|+++|.+..
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 5799999999999999999999999999998654
No 379
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=85.79 E-value=0.59 Score=46.29 Aligned_cols=34 Identities=9% Similarity=0.180 Sum_probs=31.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
...++|+|+|-+|.++|..|++.|.+|+|+.|+.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4579999999999999999999999999999863
No 380
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=85.73 E-value=0.76 Score=47.69 Aligned_cols=34 Identities=26% Similarity=0.322 Sum_probs=31.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
...|+|+|+|..|+.+|..|+..|.+|++++++.
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3679999999999999999999999999999863
No 381
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=85.67 E-value=0.76 Score=46.42 Aligned_cols=32 Identities=31% Similarity=0.395 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHHHc--CCeEEEEecCC
Q 006176 159 DAIVIGSGIGGLVAATQLAVK--GARVLVLEKYV 190 (658)
Q Consensus 159 ~~~iiG~g~~g~~~a~~l~~~--g~~v~~~e~~~ 190 (658)
+|.|||+|..|.+.|..|++. |++|+++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 699999999999999999985 78999999864
No 382
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=85.65 E-value=1.3 Score=44.36 Aligned_cols=53 Identities=15% Similarity=0.202 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCChh
Q 006176 387 GIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNATRW 442 (658)
Q Consensus 387 ~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g~~ 442 (658)
.+.+.+.+.+.+.|++++.++ |+.|..+++.+. | +.+|+++.+|.||+|+|..
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~-v-~~~~~~~~~~~lv~AtG~~ 115 (320)
T 1trb_A 63 LLMERMHEHATKFETEIIFDH-INKVDLQNRPFR-L-NGDNGEYTCDALIIATGAS 115 (320)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-EEEEECSSSSEE-E-EESSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHCCCEEEEee-eeEEEecCCEEE-E-EeCCCEEEcCEEEECCCCC
Confidence 455567777888899999986 999987766654 4 5677889999999999964
No 383
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=85.52 E-value=0.72 Score=46.30 Aligned_cols=34 Identities=26% Similarity=0.272 Sum_probs=30.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-eEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (658)
...++|||+|.+|..+|..|++.|. +|+|+.|+.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4679999999999999999999998 899999863
No 384
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=85.42 E-value=0.77 Score=47.46 Aligned_cols=34 Identities=21% Similarity=0.355 Sum_probs=31.3
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC-eEEEEecC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKY 189 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~ 189 (658)
...+|+|+|+|-+|..+|..|...|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 35789999999999999999999998 79999986
No 385
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=85.41 E-value=0.65 Score=46.63 Aligned_cols=34 Identities=21% Similarity=0.176 Sum_probs=27.9
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
.+|-+||-|..|...|..|+++|++|++++++..
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4699999999999999999999999999998653
No 386
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=85.39 E-value=0.5 Score=48.91 Aligned_cols=32 Identities=34% Similarity=0.304 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 159 DAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 159 ~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
+|.|||+|..|...|..|+++|++|++++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999863
No 387
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=85.32 E-value=0.72 Score=49.56 Aligned_cols=33 Identities=24% Similarity=0.226 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHHHc--CCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVK--GARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~--g~~v~~~e~~~ 190 (658)
.+|.|||.|..|+..|..|+++ |++|+++|++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5799999999999999999999 89999999853
No 388
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=85.30 E-value=0.38 Score=50.39 Aligned_cols=35 Identities=26% Similarity=0.439 Sum_probs=31.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcC--CeEEEEecCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKG--ARVLVLEKYVI 191 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g--~~v~~~e~~~~ 191 (658)
.++|+|||||++|++||.+|++.| .+|+|+|+++.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 367999999999999999999876 58999999765
No 389
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=85.26 E-value=0.71 Score=52.48 Aligned_cols=34 Identities=26% Similarity=0.256 Sum_probs=31.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|.|||+|..|...|..|+++|++|+++|++.
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 3579999999999999999999999999999864
No 390
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=85.23 E-value=0.87 Score=48.77 Aligned_cols=36 Identities=11% Similarity=0.062 Sum_probs=33.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (658)
..+++|||+|..|+-.|..|++.|.+|+++++.+.+
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~ 205 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEI 205 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 468999999999999999999999999999998754
No 391
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=85.22 E-value=0.8 Score=49.38 Aligned_cols=36 Identities=17% Similarity=0.242 Sum_probs=33.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIP 192 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~~ 192 (658)
..+++|||+|..|+-.|..|++.|.+|+++++.+.+
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 226 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLI 226 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcc
Confidence 468999999999999999999999999999998754
No 392
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=85.14 E-value=0.55 Score=49.40 Aligned_cols=31 Identities=26% Similarity=0.345 Sum_probs=28.8
Q ss_pred cEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 159 DAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 159 ~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
+|.|||+|..|+..|..|++ |++|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 58999999999999999999 99999999864
No 393
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=85.05 E-value=0.97 Score=45.75 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=31.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC--eEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (658)
..+|.|||.|..|.+.|..|++.|+ +|++++++.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 3579999999999999999999999 999999864
No 394
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=85.04 E-value=0.44 Score=45.52 Aligned_cols=34 Identities=15% Similarity=0.150 Sum_probs=30.3
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEE-EecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLV-LEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~-~e~~~ 190 (658)
..+|.|||+|..|.+.|..|++.|++|++ ++++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 35799999999999999999999999998 88753
No 395
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=85.03 E-value=0.8 Score=49.27 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=31.6
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|.|||.|..|...|..|+++|++|++++++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4679999999999999999999999999999875
No 396
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=84.96 E-value=0.67 Score=49.95 Aligned_cols=35 Identities=17% Similarity=0.233 Sum_probs=31.6
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+.+|.|||.|..|...|..|+++|++|++++|+.
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 35689999999999999999999999999999864
No 397
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=84.92 E-value=0.88 Score=47.38 Aligned_cols=34 Identities=38% Similarity=0.473 Sum_probs=31.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
...|+|||+|..|+.+|..|+..|.+|+++|+..
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4679999999999999999999999999999753
No 398
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=84.89 E-value=0.87 Score=46.30 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=30.6
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC--eEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (658)
..+|.|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 4689999999999999999999997 899999753
No 399
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=84.81 E-value=0.78 Score=44.85 Aligned_cols=32 Identities=19% Similarity=0.307 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHHHcC-CeEEEEecCC
Q 006176 159 DAIVIGSGIGGLVAATQLAVKG-ARVLVLEKYV 190 (658)
Q Consensus 159 ~~~iiG~g~~g~~~a~~l~~~g-~~v~~~e~~~ 190 (658)
+|.|||+|..|...|..|++.| ++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 5899999999999999999999 9999999863
No 400
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=84.71 E-value=0.79 Score=49.45 Aligned_cols=33 Identities=21% Similarity=0.279 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHHHc--CCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVK--GARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~--g~~v~~~e~~~ 190 (658)
.+|.|||.|..|+..|..|+++ |++|+++|++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5799999999999999999998 79999999753
No 401
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=84.66 E-value=0.77 Score=46.60 Aligned_cols=32 Identities=22% Similarity=0.290 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHHHcCC--eEEEEecCC
Q 006176 159 DAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (658)
Q Consensus 159 ~~~iiG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (658)
+|.|||+|-.|.+.|..|++.|+ +|+++|+..
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 58999999999999999999999 999999863
No 402
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=84.63 E-value=0.91 Score=46.49 Aligned_cols=34 Identities=15% Similarity=0.158 Sum_probs=31.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|.|||.|..|.+.|..|++.|++|++++++.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999864
No 403
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=84.49 E-value=0.88 Score=45.48 Aligned_cols=34 Identities=24% Similarity=0.229 Sum_probs=30.8
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|.|||+|..|...|..|++.|++|++++++.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3579999999999999999999999999999864
No 404
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=84.46 E-value=0.88 Score=44.96 Aligned_cols=32 Identities=22% Similarity=0.287 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 159 DAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 159 ~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
+|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999998753
No 405
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=84.26 E-value=0.97 Score=45.61 Aligned_cols=33 Identities=27% Similarity=0.356 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHHHcCC-eEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (658)
.+|.|||+|..|...|+.|+..|+ +|+++|...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 579999999999999999999997 999999764
No 406
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=84.23 E-value=0.89 Score=49.18 Aligned_cols=34 Identities=21% Similarity=0.120 Sum_probs=31.5
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|.|||.|..|...|..|+++|++|++++++.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4679999999999999999999999999999864
No 407
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=83.99 E-value=0.98 Score=45.79 Aligned_cols=34 Identities=21% Similarity=0.452 Sum_probs=30.5
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC--eEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (658)
..+|+|||+|-.|.+.|+.|+..|. +|+++|...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999997 899999764
No 408
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=83.96 E-value=1.1 Score=45.32 Aligned_cols=34 Identities=15% Similarity=0.247 Sum_probs=31.0
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC-eEEEEecC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKY 189 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~ 189 (658)
....++|+|+|-+|.++|..|++.|. +|+|+.|+
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 35689999999999999999999998 79999987
No 409
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=83.95 E-value=1.1 Score=44.41 Aligned_cols=33 Identities=12% Similarity=0.172 Sum_probs=30.6
Q ss_pred ccEEEECC-ChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGS-GIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~-g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+|.|||+ |..|...|..|++.|++|++++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 57999999 9999999999999999999999864
No 410
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=83.92 E-value=0.9 Score=45.27 Aligned_cols=32 Identities=22% Similarity=0.270 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 159 DAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 159 ~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
+|.|||+|..|...|..|++.|++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 58999999999999999999999999999864
No 411
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=83.70 E-value=0.56 Score=47.63 Aligned_cols=38 Identities=26% Similarity=0.415 Sum_probs=29.1
Q ss_pred CCCCCcEEEeCCCc---c--C--CCChhHHhhhHHHHHHHHHHHh
Q 006176 614 TTGINGLYCVGDSC---F--P--GQGVIAVAFSGVMCAHRVAADI 651 (658)
Q Consensus 614 ~t~i~gLylaG~~~---~--p--G~Gv~ga~~sG~~aA~~Il~~l 651 (658)
.|.+||+|.|||.+ + + |.-..+++.||++||+.|++.|
T Consensus 280 ~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~l 324 (326)
T 3fpz_A 280 YAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHF 324 (326)
T ss_dssp CTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHh
Confidence 47789999999864 1 1 2234466789999999999987
No 412
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=83.59 E-value=1.1 Score=44.46 Aligned_cols=35 Identities=20% Similarity=0.196 Sum_probs=31.4
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC-eEEEEecCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (658)
...+++|||+|-+|.++|+.|++.|. +|+|+.|+.
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 35689999999999999999999998 899999864
No 413
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=83.54 E-value=0.97 Score=45.14 Aligned_cols=33 Identities=24% Similarity=0.279 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+|.|||+|..|...|..|++.|++|++++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999864
No 414
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=83.50 E-value=1.1 Score=44.82 Aligned_cols=35 Identities=29% Similarity=0.337 Sum_probs=31.9
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
....|.|||+|..|..+|..|...|.+|+++++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 35689999999999999999999999999999864
No 415
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=83.47 E-value=1.3 Score=45.03 Aligned_cols=35 Identities=17% Similarity=0.242 Sum_probs=31.3
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC--eEEEEecCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (658)
...+|.|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 35689999999999999999999997 899999753
No 416
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=83.42 E-value=0.68 Score=47.57 Aligned_cols=34 Identities=21% Similarity=0.113 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHHHcC-------CeEEEEecCCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKG-------ARVLVLEKYVI 191 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g-------~~v~~~e~~~~ 191 (658)
.+|.|||+|..|.+.|..|+++| ++|++++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 57999999999999999999999 89999998754
No 417
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=83.40 E-value=0.94 Score=44.83 Aligned_cols=34 Identities=21% Similarity=0.363 Sum_probs=31.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+++|||+|.+|.+.|..|.+.|.+|++++|+.
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 3579999999999999999999999999999863
No 418
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=83.38 E-value=1.2 Score=45.11 Aligned_cols=34 Identities=18% Similarity=0.173 Sum_probs=30.9
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-eEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (658)
..+|.|||+|..|.+.|..|+..|+ +|+++|...
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 4679999999999999999999988 999999865
No 419
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=83.38 E-value=0.99 Score=45.40 Aligned_cols=34 Identities=24% Similarity=0.401 Sum_probs=30.5
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC--eEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (658)
..+|.|||+|..|...|+.|+.+|+ +|+++|...
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 3689999999999999999999998 899999875
No 420
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=83.37 E-value=1.2 Score=44.57 Aligned_cols=35 Identities=29% Similarity=0.354 Sum_probs=31.9
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
....|.|||.|..|..+|..|...|.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 35689999999999999999999999999999864
No 421
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=83.34 E-value=0.77 Score=47.69 Aligned_cols=34 Identities=12% Similarity=0.119 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHHHcC-------CeEEEEecCCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKG-------ARVLVLEKYVI 191 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g-------~~v~~~e~~~~ 191 (658)
.+|.|||+|..|.+.|..|+++| ++|++++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 46999999999999999999999 99999998754
No 422
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=83.28 E-value=0.94 Score=45.67 Aligned_cols=33 Identities=21% Similarity=0.260 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHHHcC--CeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKG--ARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g--~~v~~~e~~~ 190 (658)
.+|.|||+|-.|.+.|..|+++| .+|+++|++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 36999999999999999999999 7899999864
No 423
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=83.26 E-value=1.2 Score=43.90 Aligned_cols=34 Identities=26% Similarity=0.333 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
..|+|.|+|..|...+..|.++|++|+++.|...
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 5799999999999999999999999999998643
No 424
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=83.17 E-value=1.2 Score=44.33 Aligned_cols=35 Identities=20% Similarity=0.229 Sum_probs=31.0
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC-eEEEEecCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (658)
....++|+|+|-+|.++|..|++.|. +|+|+.|+.
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 35689999999999999999999998 699998863
No 425
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=83.08 E-value=0.74 Score=45.66 Aligned_cols=35 Identities=17% Similarity=0.143 Sum_probs=31.4
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-eEEEEecCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYVI 191 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~~ 191 (658)
...++|||+|-+|.++|..|++.|. +|+|+.|+..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 4679999999999999999999998 8999998753
No 426
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=83.07 E-value=0.94 Score=45.96 Aligned_cols=34 Identities=15% Similarity=0.242 Sum_probs=30.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcC----CeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKG----ARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g----~~v~~~e~~~ 190 (658)
..+|.|||+|..|.+.|..|+++| ++|++++++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 357999999999999999999999 7899999864
No 427
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=83.05 E-value=1.1 Score=44.21 Aligned_cols=32 Identities=19% Similarity=0.296 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHHHcCC--eEEEEecCC
Q 006176 159 DAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (658)
Q Consensus 159 ~~~iiG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (658)
+|.|||+|..|.+.|..|++.|+ +|++++++.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 69999999999999999999998 899999863
No 428
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=83.01 E-value=1.2 Score=43.45 Aligned_cols=32 Identities=19% Similarity=0.351 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHHHcCC-eEEEEecCC
Q 006176 159 DAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (658)
Q Consensus 159 ~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (658)
+++|||+|-+|.+++..|++.|. +|+|++|+.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 79999999999999999999998 899999864
No 429
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=83.01 E-value=1 Score=43.95 Aligned_cols=34 Identities=15% Similarity=0.059 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHHHcC----CeEEEEecCCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKG----ARVLVLEKYVI 191 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g----~~v~~~e~~~~ 191 (658)
.+|.|||+|..|.+.|..|+++| ++|++++++..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 47999999999999999999999 78999998754
No 430
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=82.98 E-value=0.91 Score=51.51 Aligned_cols=34 Identities=35% Similarity=0.320 Sum_probs=31.3
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
-.+|.|||+|..|...|..|+++|++|+++|++.
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 3579999999999999999999999999999864
No 431
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=82.95 E-value=1.2 Score=42.44 Aligned_cols=35 Identities=17% Similarity=0.268 Sum_probs=31.2
Q ss_pred CCccEEEECC-ChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 156 DDYDAIVIGS-GIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 156 ~~~~~~iiG~-g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+.|+|.|| |..|...|..|+++|++|+++.|..
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 3567999998 9999999999999999999999864
No 432
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=82.88 E-value=1 Score=48.51 Aligned_cols=33 Identities=21% Similarity=0.235 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+|.|||.|..|...|..|+++|++|++++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 469999999999999999999999999999864
No 433
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=82.84 E-value=1.3 Score=43.88 Aligned_cols=35 Identities=11% Similarity=0.217 Sum_probs=31.0
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC-eEEEEecCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (658)
....++|+|+|-+|.++|..|++.|. +|+|+.|+.
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 35789999999999999999999996 899998853
No 434
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=82.60 E-value=1.3 Score=44.74 Aligned_cols=34 Identities=21% Similarity=0.368 Sum_probs=30.0
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC--eEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (658)
..+|.|||+|..|.+.|+.|+..|. +|+++|...
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 4689999999999999999998885 799999863
No 435
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=82.56 E-value=1.2 Score=44.77 Aligned_cols=33 Identities=27% Similarity=0.207 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+|-+||-|..|...|..|.++|++|++++++.
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~ 36 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 479999999999999999999999999999864
No 436
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=82.50 E-value=0.98 Score=45.22 Aligned_cols=32 Identities=13% Similarity=0.106 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHHHcCC--eEEEEecCC
Q 006176 159 DAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (658)
Q Consensus 159 ~~~iiG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (658)
+|.|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 69999999999999999999998 899999864
No 437
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=82.37 E-value=1.2 Score=47.55 Aligned_cols=35 Identities=37% Similarity=0.308 Sum_probs=31.6
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
....|+|+|+|..|..+|..|+..|.+|++.|+..
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 35679999999999999999999999999999753
No 438
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=82.29 E-value=2 Score=45.45 Aligned_cols=54 Identities=15% Similarity=0.180 Sum_probs=41.0
Q ss_pred hHHHHHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCC--cEEEcCEEEECCCh
Q 006176 385 VGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDG--REFYAKTIISNATR 441 (658)
Q Consensus 385 ~~~l~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G--~~i~ad~VV~a~g~ 441 (658)
.....+.+.+.++++|+++++++.|++|. +++++ ++..+| +++.+|.||+++|.
T Consensus 199 ~~~~~~~l~~~l~~~GV~~~~~~~v~~v~--~~~~~-~~~~~g~~~~i~~d~vi~~~G~ 254 (430)
T 3hyw_A 199 IGASKRLVEDLFAERNIDWIANVAVKAIE--PDKVI-YEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp STTHHHHHHHHHHHTTCEEECSCEEEEEC--SSEEE-EECTTSCEEEEECSEEEEECEE
T ss_pred hHHHHHHHHHHHHhCCeEEEeCceEEEEe--CCceE-EEeeCCCceEeecceEEEeccC
Confidence 34556667788899999999999999984 44443 444444 47999999999884
No 439
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=82.28 E-value=1.3 Score=44.02 Aligned_cols=35 Identities=14% Similarity=0.159 Sum_probs=31.1
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC-eEEEEecCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (658)
....++|+|+|-+|.+.|..|++.|. +|+|+.|+.
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 35689999999999999999999996 899999864
No 440
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=82.21 E-value=1.1 Score=44.08 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+|+|.|+|..|...+..|.++|++|+++.|..
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 579999999999999999999999999999865
No 441
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=82.20 E-value=1.1 Score=49.52 Aligned_cols=37 Identities=38% Similarity=0.593 Sum_probs=33.9
Q ss_pred CCccEEEECCChhHHHHHHHHHH-cCCeEEEEecCCCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAV-KGARVLVLEKYVIP 192 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~-~g~~v~~~e~~~~~ 192 (658)
..+|++|||+|++|+++|.+|++ .|.+|+|+|++...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 46999999999999999999999 79999999998654
No 442
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=82.09 E-value=1.4 Score=41.25 Aligned_cols=32 Identities=19% Similarity=0.277 Sum_probs=29.2
Q ss_pred cEEEECC-ChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 159 DAIVIGS-GIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 159 ~~~iiG~-g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
+|+|+|| |..|...+..|+++|++|+++.|+.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 5899995 9999999999999999999999863
No 443
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=81.92 E-value=1.3 Score=45.05 Aligned_cols=35 Identities=17% Similarity=0.381 Sum_probs=31.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCe-EEEEecCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGAR-VLVLEKYVI 191 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~-v~~~e~~~~ 191 (658)
..+|+|||+|-.|..+|.+|++.|+. ++|+|....
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 69 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEe
Confidence 46799999999999999999999974 999998643
No 444
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=81.91 E-value=1.5 Score=44.29 Aligned_cols=34 Identities=15% Similarity=0.347 Sum_probs=30.9
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC-eEEEEecC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKY 189 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~ 189 (658)
....++|+|+|-+|.++|..|++.|. +|+|+.|.
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 35689999999999999999999998 79999987
No 445
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=81.82 E-value=1.1 Score=48.13 Aligned_cols=33 Identities=33% Similarity=0.433 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+|.|||+|..|...|..|+++|++|++++++.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 369999999999999999999999999999853
No 446
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=81.80 E-value=1.2 Score=50.47 Aligned_cols=34 Identities=26% Similarity=0.191 Sum_probs=31.5
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
-.+|.|||+|..|-..|+.++.+|++|+++|...
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 3589999999999999999999999999999865
No 447
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=81.77 E-value=1.2 Score=43.33 Aligned_cols=34 Identities=29% Similarity=0.316 Sum_probs=30.6
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-eEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (658)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4679999999999999999999997 599999864
No 448
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=81.73 E-value=1.1 Score=44.44 Aligned_cols=31 Identities=29% Similarity=0.281 Sum_probs=28.7
Q ss_pred cEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 159 DAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 159 ~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
+|.|||+|..|...|..|++ |++|++++++.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 59999999999999999999 99999999864
No 449
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=81.73 E-value=1.3 Score=44.74 Aligned_cols=34 Identities=32% Similarity=0.286 Sum_probs=30.4
Q ss_pred CCccEEEECCC-hhHHHHHHHHHHcCCeEEEEecC
Q 006176 156 DDYDAIVIGSG-IGGLVAATQLAVKGARVLVLEKY 189 (658)
Q Consensus 156 ~~~~~~iiG~g-~~g~~~a~~l~~~g~~v~~~e~~ 189 (658)
...+++|||+| +.|..+|..|...|..|+|++++
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 45789999999 67999999999999999999875
No 450
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=81.72 E-value=1.1 Score=50.06 Aligned_cols=49 Identities=10% Similarity=0.125 Sum_probs=39.4
Q ss_pred HcCcEEEeCceeeEEEEeCC--EEEEEEEC---CCc--EEEcCEEEECCChhHHHh
Q 006176 398 DKGSEILYKANVTKVILEQG--KAVGVRLS---DGR--EFYAKTIISNATRWDTFG 446 (658)
Q Consensus 398 ~~G~~I~~~~~V~~I~~~~~--~v~gV~~~---~G~--~i~ad~VV~a~g~~~~~~ 446 (658)
+.|++|++++.|++|..+++ ++++|++. +|+ ++.||.||+|+|......
T Consensus 272 ~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~ 327 (623)
T 3pl8_A 272 EERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQ 327 (623)
T ss_dssp EEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHH
T ss_pred CCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHH
Confidence 34899999999999998753 78899875 354 578999999999776543
No 451
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=81.53 E-value=1.4 Score=43.65 Aligned_cols=33 Identities=21% Similarity=0.255 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHHHcCC---eEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGA---RVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~---~v~~~e~~~ 190 (658)
.+|.|||+|..|.+.|..|+++|+ +|++++++.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 579999999999999999999999 899999864
No 452
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=81.48 E-value=1.4 Score=42.76 Aligned_cols=33 Identities=15% Similarity=0.180 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHHHcCC----eEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGA----RVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~----~v~~~e~~~ 190 (658)
.+|.|||+|..|.+.|..|+++|+ +|++++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 469999999999999999999998 999999863
No 453
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=81.35 E-value=1.4 Score=44.67 Aligned_cols=34 Identities=21% Similarity=0.450 Sum_probs=30.6
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC--eEEEEecC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKY 189 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~--~v~~~e~~ 189 (658)
...+|+|||+|..|.++|+.|+..|+ +++++|..
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 34689999999999999999999987 89999975
No 454
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=81.33 E-value=1.6 Score=44.37 Aligned_cols=35 Identities=17% Similarity=0.314 Sum_probs=31.1
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC--eEEEEecCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (658)
...+|.|||+|..|.+.|+.|+.+|. +++++|...
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 45789999999999999999999997 899999753
No 455
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=81.33 E-value=1.1 Score=46.43 Aligned_cols=39 Identities=26% Similarity=0.314 Sum_probs=34.0
Q ss_pred CccEEEECC-ChhHHHHHHHHHHcCC---eEEEEecCC-CCCcc
Q 006176 157 DYDAIVIGS-GIGGLVAATQLAVKGA---RVLVLEKYV-IPGGS 195 (658)
Q Consensus 157 ~~~~~iiG~-g~~g~~~a~~l~~~g~---~v~~~e~~~-~~gg~ 195 (658)
..+|+|||+ |.+|+.|+..+...|. .|+++|.+. .-||.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCc
Confidence 468999999 9999999999999998 899999975 44554
No 456
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=81.04 E-value=1.1 Score=45.40 Aligned_cols=33 Identities=12% Similarity=0.201 Sum_probs=29.8
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|+|||+|..|+-+|..|++.| +|+++.+..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 468999999999999999999998 799998863
No 457
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=81.01 E-value=0.83 Score=47.97 Aligned_cols=30 Identities=30% Similarity=0.337 Sum_probs=28.0
Q ss_pred ccEEEECCChhHHHHHHHHHH-cCCeEEEEe
Q 006176 158 YDAIVIGSGIGGLVAATQLAV-KGARVLVLE 187 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~-~g~~v~~~e 187 (658)
.+|.|||+|..|.+.|..|++ +|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 479999999999999999998 599999999
No 458
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=80.96 E-value=1.2 Score=43.43 Aligned_cols=30 Identities=23% Similarity=0.231 Sum_probs=28.0
Q ss_pred cEEEECCChhHHHHHHHHHHcCCeEEEEec
Q 006176 159 DAIVIGSGIGGLVAATQLAVKGARVLVLEK 188 (658)
Q Consensus 159 ~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~ 188 (658)
+|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 589999999999999999999999999876
No 459
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=80.92 E-value=1.6 Score=41.11 Aligned_cols=32 Identities=22% Similarity=0.359 Sum_probs=29.3
Q ss_pred cEEEECC-ChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 159 DAIVIGS-GIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 159 ~~~iiG~-g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
+|+|.|| |..|...+..|+++|++|+++.|..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4899998 9999999999999999999998853
No 460
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=80.89 E-value=1.2 Score=43.48 Aligned_cols=33 Identities=12% Similarity=0.100 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+|.|||+|..|...|..|++.|++|.+++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 579999999999999999999999999999863
No 461
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=80.79 E-value=1.2 Score=44.32 Aligned_cols=34 Identities=24% Similarity=0.379 Sum_probs=30.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-eEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (658)
..+|+|||+|-.|..+|.+|++.|+ +++|+|.+.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 4689999999999999999999997 599999764
No 462
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=80.76 E-value=1.2 Score=43.57 Aligned_cols=33 Identities=30% Similarity=0.274 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCe-EEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGAR-VLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~-v~~~e~~~ 190 (658)
.+|.|||+|..|...|..|++.|++ |.+++++.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 5799999999999999999999999 89999853
No 463
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=80.75 E-value=1.4 Score=44.48 Aligned_cols=32 Identities=25% Similarity=0.309 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHHHcCC--eEEEEecCC
Q 006176 159 DAIVIGSGIGGLVAATQLAVKGA--RVLVLEKYV 190 (658)
Q Consensus 159 ~~~iiG~g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (658)
+|.|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 69999999999999999999987 899999865
No 464
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=80.67 E-value=1.2 Score=44.49 Aligned_cols=33 Identities=21% Similarity=0.395 Sum_probs=29.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
...++|+|+|-+|.++|..|++.| +|+|++|+.
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 457999999999999999999999 999998863
No 465
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=80.60 E-value=1.1 Score=44.50 Aligned_cols=32 Identities=31% Similarity=0.252 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+|.|||+|..|...|..|++.|++|++++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 479999999999999999999999999998 54
No 466
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=80.33 E-value=2 Score=39.62 Aligned_cols=33 Identities=27% Similarity=0.343 Sum_probs=30.3
Q ss_pred ccEEEECC-ChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGS-GIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~-g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..|+|+|| |..|...+..|.++|++|+++.|+.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 46999998 9999999999999999999999864
No 467
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=80.29 E-value=1.5 Score=47.03 Aligned_cols=33 Identities=18% Similarity=0.230 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+|.|||.|..|...|..|+++|++|++++++.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 579999999999999999999999999999863
No 468
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=80.21 E-value=1.6 Score=42.66 Aligned_cols=32 Identities=31% Similarity=0.395 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 159 DAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 159 ~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
+++|||+|-+|...|..|.+.|++|++++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999864
No 469
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=80.13 E-value=1.8 Score=43.02 Aligned_cols=33 Identities=30% Similarity=0.423 Sum_probs=30.3
Q ss_pred CccEEEEC-CChhHHHHHHHHHHcCCeEEEEecC
Q 006176 157 DYDAIVIG-SGIGGLVAATQLAVKGARVLVLEKY 189 (658)
Q Consensus 157 ~~~~~iiG-~g~~g~~~a~~l~~~g~~v~~~e~~ 189 (658)
...++|+| +|-+|..+|..|++.|.+|+++.|+
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 46799999 8999999999999999999999886
No 470
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=80.05 E-value=1.6 Score=44.63 Aligned_cols=33 Identities=27% Similarity=0.233 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..|.|||.|..|.+.|..|++.|++|+++++..
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 469999999999999999999999999999864
No 471
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=80.04 E-value=0.69 Score=44.45 Aligned_cols=34 Identities=12% Similarity=0.118 Sum_probs=30.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
...++|+|+|..|...|..|.+.|+ |+++|++..
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 4579999999999999999999999 999998753
No 472
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=80.01 E-value=1.6 Score=43.01 Aligned_cols=33 Identities=18% Similarity=0.233 Sum_probs=30.1
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-eEEEEecC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKY 189 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~ 189 (658)
..+++|||+|-+|.++|+.|++.|. +|+|+.|+
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 3579999999999999999999997 69999886
No 473
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=79.72 E-value=1.6 Score=44.33 Aligned_cols=38 Identities=21% Similarity=0.165 Sum_probs=30.8
Q ss_pred CCCCccEEEECC-ChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 154 GADDYDAIVIGS-GIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 154 ~~~~~~~~iiG~-g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
......|+|.|| |..|...+..|.++|++|+++.+...
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 344578999998 99999999999999999999998754
No 474
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=79.67 E-value=1.7 Score=43.93 Aligned_cols=33 Identities=18% Similarity=0.311 Sum_probs=29.6
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC--eEEEEecC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKY 189 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~--~v~~~e~~ 189 (658)
..+|+|||+|-.|.+.|+.|+..|. +|.++|..
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4689999999999999999999885 79999975
No 475
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=79.45 E-value=1.8 Score=44.61 Aligned_cols=34 Identities=21% Similarity=0.282 Sum_probs=31.0
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKY 189 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~ 189 (658)
....|+|+|.|-.|..+|..|.+.|.+|++.|++
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 3467999999999999999999999999999864
No 476
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=79.34 E-value=1.7 Score=45.65 Aligned_cols=35 Identities=31% Similarity=0.458 Sum_probs=31.3
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCC-eEEEEecCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (658)
....|+|||+|..|..+|..|...|. +|+++++..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 34679999999999999999999998 899999864
No 477
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=78.54 E-value=1.8 Score=45.40 Aligned_cols=35 Identities=26% Similarity=0.215 Sum_probs=31.7
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
....|+|||.|..|..+|..|...|.+|+++|+++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 35789999999999999999999999999999754
No 478
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=78.53 E-value=1.6 Score=43.51 Aligned_cols=51 Identities=14% Similarity=0.164 Sum_probs=42.0
Q ss_pred HHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCCcEEEcCEEEECCC
Q 006176 389 AKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDGREFYAKTIISNAT 440 (658)
Q Consensus 389 ~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G~~i~ad~VV~a~g 440 (658)
...+.+.++++|++++.++ |+.+..+++++..|++.+|+++.+|.||++++
T Consensus 183 ~~~~~~~l~~~g~~~~~~~-v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g 233 (304)
T 4fk1_A 183 SQTIMDELSNKNIPVITES-IRTLQGEGGYLKKVEFHSGLRIERAGGFIVPT 233 (304)
T ss_dssp CHHHHHHHHTTTCCEECSC-EEEEESGGGCCCEEEETTSCEECCCEEEECCE
T ss_pred hhhhhhhhhccceeEeeee-EEEeecCCCeeeeeeccccceeeecceeeeec
Confidence 3456677888999998764 88888788888889999999999998888776
No 479
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=78.43 E-value=1.5 Score=47.30 Aligned_cols=34 Identities=21% Similarity=0.129 Sum_probs=30.6
Q ss_pred CccEEEECCChhHHH-HHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLV-AATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~-~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|.|||.|-+|++ +|..|.++|++|++.|...
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 468999999999997 6999999999999999754
No 480
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=78.39 E-value=2.3 Score=42.13 Aligned_cols=33 Identities=21% Similarity=0.281 Sum_probs=30.0
Q ss_pred cEEEECC-ChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 159 DAIVIGS-GIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 159 ~~~iiG~-g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
+|+|.|| |..|...+..|.++|++|+++-|++.
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 5999998 99999999999999999999987643
No 481
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=78.26 E-value=2.2 Score=43.02 Aligned_cols=35 Identities=17% Similarity=0.386 Sum_probs=31.1
Q ss_pred CCccEEEECC-ChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 156 DDYDAIVIGS-GIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 156 ~~~~~~iiG~-g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+.|+|.|| |..|...+..|+++|++|+++.|..
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3467999998 9999999999999999999999854
No 482
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=78.22 E-value=1.8 Score=44.57 Aligned_cols=34 Identities=18% Similarity=0.366 Sum_probs=30.5
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-eEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (658)
..+|+|||+|-.|..+|.+|++.|+ +++|+|.+.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 4679999999999999999999997 599999764
No 483
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=78.14 E-value=2 Score=46.19 Aligned_cols=35 Identities=29% Similarity=0.250 Sum_probs=31.5
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
....|+|||.|..|..+|..|...|.+|+++|+..
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34679999999999999999999999999999864
No 484
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=78.10 E-value=2.3 Score=43.37 Aligned_cols=35 Identities=20% Similarity=0.104 Sum_probs=32.0
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
....|.|||.|..|...|..|+..|++|+++++..
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 45679999999999999999999999999999865
No 485
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=77.98 E-value=1.7 Score=41.07 Aligned_cols=33 Identities=18% Similarity=0.269 Sum_probs=30.2
Q ss_pred ccEEEECC-ChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 158 YDAIVIGS-GIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~-g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
.+|+|.|| |..|...+..|.++|++|+++.|..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 57999995 9999999999999999999999864
No 486
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=77.08 E-value=2.7 Score=44.85 Aligned_cols=45 Identities=18% Similarity=0.340 Sum_probs=35.0
Q ss_pred cCcEEEeCceeeEEEEeC-C-EEEEEEEC---------------CC--cEEEcCEEEECCChhH
Q 006176 399 KGSEILYKANVTKVILEQ-G-KAVGVRLS---------------DG--REFYAKTIISNATRWD 443 (658)
Q Consensus 399 ~G~~I~~~~~V~~I~~~~-~-~v~gV~~~---------------~G--~~i~ad~VV~a~g~~~ 443 (658)
+|+++++++.+++|..++ + ++.+|++. +| +++.+|.||+++|...
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p 333 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKS 333 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEEC
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCC
Confidence 899999999999998653 4 66666653 34 4789999999999543
No 487
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=76.66 E-value=2.8 Score=41.71 Aligned_cols=34 Identities=26% Similarity=0.302 Sum_probs=30.0
Q ss_pred CCccEEEECC-ChhHHHHHHHHHHcCCeEEEEecC
Q 006176 156 DDYDAIVIGS-GIGGLVAATQLAVKGARVLVLEKY 189 (658)
Q Consensus 156 ~~~~~~iiG~-g~~g~~~a~~l~~~g~~v~~~e~~ 189 (658)
...+++|||. |+.|..+|..|.+.|..|+++.+.
T Consensus 164 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~ 198 (300)
T 4a26_A 164 AGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG 198 (300)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 4578999996 568999999999999999999873
No 488
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=76.66 E-value=2.4 Score=42.31 Aligned_cols=35 Identities=26% Similarity=0.370 Sum_probs=31.8
Q ss_pred CccEEEECC-ChhHHHHHHHHHHcCCeEEEEecCCC
Q 006176 157 DYDAIVIGS-GIGGLVAATQLAVKGARVLVLEKYVI 191 (658)
Q Consensus 157 ~~~~~iiG~-g~~g~~~a~~l~~~g~~v~~~e~~~~ 191 (658)
...|+|.|| |..|...+..|.++|++|+++.|...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 467999999 99999999999999999999998754
No 489
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=76.52 E-value=2.5 Score=43.26 Aligned_cols=34 Identities=15% Similarity=0.297 Sum_probs=29.9
Q ss_pred CccEEEECC-ChhHHHHHHHHHHcCC--eEEEEecCC
Q 006176 157 DYDAIVIGS-GIGGLVAATQLAVKGA--RVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~-g~~g~~~a~~l~~~g~--~v~~~e~~~ 190 (658)
..+|+|||+ |-.|.++|+.|+..|. +|+++|...
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 468999997 9999999999999985 799999753
No 490
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=76.36 E-value=2.4 Score=42.05 Aligned_cols=33 Identities=12% Similarity=0.121 Sum_probs=29.3
Q ss_pred ccEEEECCChhHHHHHHHHHHc--CCeEEEEecCC
Q 006176 158 YDAIVIGSGIGGLVAATQLAVK--GARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~--g~~v~~~e~~~ 190 (658)
.+|.|||+|..|.+.|..|++. |++|++++++.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 5799999999999999999988 67899998753
No 491
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=76.10 E-value=2.8 Score=41.75 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=30.4
Q ss_pred CCccEEEECCC-hhHHHHHHHHHHcCCeEEEEecC
Q 006176 156 DDYDAIVIGSG-IGGLVAATQLAVKGARVLVLEKY 189 (658)
Q Consensus 156 ~~~~~~iiG~g-~~g~~~a~~l~~~g~~v~~~e~~ 189 (658)
...+++|||+| +.|..+|..|.+.|..|+++.+.
T Consensus 164 ~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 164 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 45789999999 68999999999999999999753
No 492
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=76.08 E-value=1.8 Score=46.81 Aligned_cols=58 Identities=19% Similarity=0.188 Sum_probs=41.5
Q ss_pred ccEEEECCChhHHHHHHHHHHc--------------CCeEEEEecCCCCCcceeeEeeCCeEEccccccccCCcCCCchH
Q 006176 158 YDAIVIGSGIGGLVAATQLAVK--------------GARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLN 223 (658)
Q Consensus 158 ~~~~iiG~g~~g~~~a~~l~~~--------------g~~v~~~e~~~~~gg~~~t~~~~g~~~d~G~~~~~g~~~~~~~~ 223 (658)
..++|||||++|+-+|..|++. ..+|+|+|+.+.+-.... .....
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~---------------------~~~~~ 276 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFE---------------------KKLSS 276 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSC---------------------HHHHH
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCC---------------------HHHHH
Confidence 3699999999999999888753 368999999876522110 11234
Q ss_pred HHHHHHHhcCCce
Q 006176 224 LITQALAAVGCEM 236 (658)
Q Consensus 224 ~~~~ll~~lG~~~ 236 (658)
.+.+.+++.|+++
T Consensus 277 ~~~~~L~~~GV~v 289 (502)
T 4g6h_A 277 YAQSHLENTSIKV 289 (502)
T ss_dssp HHHHHHHHTTCEE
T ss_pred HHHHHHHhcceee
Confidence 5677888889865
No 493
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=75.97 E-value=3.5 Score=38.72 Aligned_cols=33 Identities=9% Similarity=0.166 Sum_probs=29.2
Q ss_pred ccEEEECC-ChhHHHHHHHHH-HcCCeEEEEecCC
Q 006176 158 YDAIVIGS-GIGGLVAATQLA-VKGARVLVLEKYV 190 (658)
Q Consensus 158 ~~~~iiG~-g~~g~~~a~~l~-~~g~~v~~~e~~~ 190 (658)
..|+|.|| |-.|...|..|+ +.|++|+++.|+.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 34999995 999999999999 8999999999864
No 494
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=75.84 E-value=2.9 Score=41.01 Aligned_cols=34 Identities=12% Similarity=0.116 Sum_probs=30.2
Q ss_pred CCccEEEECCC-hhHHHHHHHHHHcCCeEEEEecC
Q 006176 156 DDYDAIVIGSG-IGGLVAATQLAVKGARVLVLEKY 189 (658)
Q Consensus 156 ~~~~~~iiG~g-~~g~~~a~~l~~~g~~v~~~e~~ 189 (658)
...+++|||.| +.|..+|..|.+.|..|++..+.
T Consensus 149 ~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~ 183 (276)
T 3ngx_A 149 HENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK 183 (276)
T ss_dssp CSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 45789999976 79999999999999999999763
No 495
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=77.60 E-value=0.56 Score=44.13 Aligned_cols=34 Identities=15% Similarity=0.080 Sum_probs=30.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
..+|.|||+|-.|...|..|.+.|++|+++++..
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 52 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNP 52 (201)
Confidence 3569999999999999999999999999998864
No 496
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=75.67 E-value=2.5 Score=46.42 Aligned_cols=35 Identities=14% Similarity=0.362 Sum_probs=31.2
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-eEEEEecCCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYVI 191 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~~ 191 (658)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+..
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~V 361 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 361 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCC
Confidence 4689999999999999999999997 4999998653
No 497
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=75.46 E-value=2.7 Score=42.53 Aligned_cols=33 Identities=18% Similarity=0.368 Sum_probs=29.8
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC--eEEEEecC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA--RVLVLEKY 189 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~--~v~~~e~~ 189 (658)
+.+|+|||+|-.|.+.|+.|+..+. ++.++|..
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 4689999999999999999999886 79999974
No 498
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=75.45 E-value=2.3 Score=46.58 Aligned_cols=34 Identities=15% Similarity=0.343 Sum_probs=30.7
Q ss_pred CccEEEECCChhHHHHHHHHHHcCC-eEEEEecCC
Q 006176 157 DYDAIVIGSGIGGLVAATQLAVKGA-RVLVLEKYV 190 (658)
Q Consensus 157 ~~~~~iiG~g~~g~~~a~~l~~~g~-~v~~~e~~~ 190 (658)
..+|+|||+|-.|..+|.+|++.|+ +++|+|.+.
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~ 361 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 361 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 4689999999999999999999998 599999764
No 499
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=75.27 E-value=2.5 Score=43.04 Aligned_cols=35 Identities=20% Similarity=0.172 Sum_probs=31.8
Q ss_pred CCccEEEECCChhHHHHHHHHHHcCCeEEEEecCC
Q 006176 156 DDYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYV 190 (658)
Q Consensus 156 ~~~~~~iiG~g~~g~~~a~~l~~~g~~v~~~e~~~ 190 (658)
....|.|||.|-.|...|..|+..|++|+++++..
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 45689999999999999999999999999999864
No 500
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=75.14 E-value=4.4 Score=45.57 Aligned_cols=50 Identities=12% Similarity=0.100 Sum_probs=38.3
Q ss_pred HHHHHHHHHHcCcEEEeCceeeEEEEeCCEEEEEEECCC--cEEEcCEEEECCChh
Q 006176 389 AKSLAKGLADKGSEILYKANVTKVILEQGKAVGVRLSDG--REFYAKTIISNATRW 442 (658)
Q Consensus 389 ~~~L~~~l~~~G~~I~~~~~V~~I~~~~~~v~gV~~~~G--~~i~ad~VV~a~g~~ 442 (658)
...+.+.++++|++++++++|++|. ++.++ ++ .+| +++.+|.||+|+|..
T Consensus 576 ~~~~~~~l~~~GV~v~~~~~v~~i~--~~~v~-~~-~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 576 GWIHRTTLLSRGVKMIPGVSYQKID--DDGLH-VV-INGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEEE--TTEEE-EE-ETTEEEEECCSEEEECCCEE
T ss_pred HHHHHHHHHhcCCEEEeCcEEEEEe--CCeEE-Ee-cCCeEEEEeCCEEEECCCcc
Confidence 3445677889999999999999986 34332 33 577 578999999999954
Done!