BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006178
(658 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 161/322 (50%), Gaps = 32/322 (9%)
Query: 334 KDHIYI-----DSEI-LKDVVRFSRQELEVACEDFSN--IIGSSPDSLVYKGTMKGGPEI 385
+DH + D E+ L + RFS +EL+VA ++FSN I+G VYKG + G +
Sbjct: 6 QDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLV 65
Query: 386 AVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNG 445
AV L KEE G EL FQ EV ++ H N +L G+C +P R+LV+ Y +NG
Sbjct: 66 AVKRL--KEERXQGG-ELQFQTEVEMISMAVHRNLLRLRGFC--MTPTERLLVYPYMANG 120
Query: 446 TLYEHLHYGERCQ--VSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503
++ L Q + W +R +I +G ARGL YLH P ++ ++ + L E+F
Sbjct: 121 SVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 180
Query: 504 PKLVDFDSWKTILARSEKNP----GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLE 559
+ DF K + + GT+G I P L + +++ +GV+LLE
Sbjct: 181 AVVGDFGLAKLMDYKDXHVXXAVRGTIGH-----IAPEYLSTGKSSEKTDVFGYGVMLLE 235
Query: 560 IISGRPP------CCKDKGNLVDWAKDYLELPEVMSYVVDPELK-HFSYDDLKVICEVVN 612
+I+G+ D L+DW K L+ + + +VD +L+ ++ ++++ + +V
Sbjct: 236 LITGQRAFDLARLANDDDVMLLDWVKGLLK-EKKLEALVDVDLQGNYKDEEVEQLIQVAL 294
Query: 613 LCVNPDITKRPSMQELCTMLEG 634
LC +RP M E+ MLEG
Sbjct: 295 LCTQSSPMERPKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 154/308 (50%), Gaps = 21/308 (6%)
Query: 340 DSEI-LKDVVRFSRQELEVACEDF--SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH 396
D E+ L + RFS +EL+VA ++F NI+G VYKG + G +AV L KEE
Sbjct: 9 DPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRL--KEER 66
Query: 397 WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGER 456
G EL FQ EV ++ H N +L G+C +P R+LV+ Y +NG++ L
Sbjct: 67 TQGG-ELQFQTEVEMISMAVHRNLLRLRGFC--MTPTERLLVYPYMANGSVASCLRERPE 123
Query: 457 CQ--VSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514
Q + W +R +I +G ARGL YLH P ++ ++ + L E+F + DF K
Sbjct: 124 SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 183
Query: 515 ILARSEK-NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP------C 567
+ + G G I P L + +++ +GV+LLE+I+G+
Sbjct: 184 MDYKDXHVXXAVRGXIGHIA--PEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA 241
Query: 568 CKDKGNLVDWAKDYLELPEVMSYVVDPELK-HFSYDDLKVICEVVNLCVNPDITKRPSMQ 626
D L+DW K L+ + + +VD +L+ ++ ++++ + +V LC +RP M
Sbjct: 242 NDDDVMLLDWVKGLLK-EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 300
Query: 627 ELCTMLEG 634
E+ MLEG
Sbjct: 301 EVVRMLEG 308
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 133/291 (45%), Gaps = 23/291 (7%)
Query: 354 ELEVACEDFSN--IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAD 411
+LE A +F + +IG VYKG ++ G ++A+ E G E + E
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRT--PESSQGIEEFETEIETLS 90
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE--RCQVSWTRRMKIVI 469
R H + L+G+C E + +L++ Y NG L HL+ + +SW +R++I I
Sbjct: 91 FCR--HPHLVSLIGFCDERNEM--ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWK--TILARSEKNPGTLG 527
G ARGL YLHT ++ S + L E+F PK+ DF K T L ++ G
Sbjct: 147 GAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKG 203
Query: 528 SQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCC----KDKGNLVDWAKDYLE 583
+ G I P L + ++Y+FGV+L E++ R ++ NL +WA +
Sbjct: 204 TLGYID--PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN 261
Query: 584 LPEVMSYVVDPEL-KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+ + +VDP L + L+ + C+ RPSM ++ LE
Sbjct: 262 NGQ-LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 133/291 (45%), Gaps = 23/291 (7%)
Query: 354 ELEVACEDFSN--IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAD 411
+LE A +F + +IG VYKG ++ G ++A+ E G E + E
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRT--PESSQGIEEFETEIETLS 90
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE--RCQVSWTRRMKIVI 469
R H + L+G+C E + +L++ Y NG L HL+ + +SW +R++I I
Sbjct: 91 FCR--HPHLVSLIGFCDERNEM--ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWK--TILARSEKNPGTLG 527
G ARGL YLHT ++ S + L E+F PK+ DF K T L ++ G
Sbjct: 147 GAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKG 203
Query: 528 SQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCC----KDKGNLVDWAKDYLE 583
+ G I P L + ++Y+FGV+L E++ R ++ NL +WA +
Sbjct: 204 TLGYID--PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN 261
Query: 584 LPEVMSYVVDPEL-KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+ + +VDP L + L+ + C+ RPSM ++ LE
Sbjct: 262 NGQ-LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 28/300 (9%)
Query: 350 FSRQELEVACEDFS--------NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYL 401
FS EL+ +F N +G +VYKG + +AV L + T L
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 402 ELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQ-VS 460
+ F +E+ +A+ HEN +LLG+ + LV+ Y NG+L + L + +S
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLC--LVYVYMPNGSLLDRLSCLDGTPPLS 131
Query: 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR-S 519
W R KI G A G+ +LH ++ S+ + L E F+ K+ DF LAR S
Sbjct: 132 WHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFG-----LARAS 183
Query: 520 EKNPGTLGSQGAI----CILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-- 573
EK T+ + + P +L + + +IY+FGV+LLEII+G P + +
Sbjct: 184 EKFAQTVMXSRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHREPQL 242
Query: 574 LVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
L+D ++ + + + +D ++ ++ + V + C++ KRP ++++ +L+
Sbjct: 243 LLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 28/300 (9%)
Query: 350 FSRQELEVACEDFS--------NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYL 401
FS EL+ +F N +G +VYKG + +AV L + T L
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 402 ELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQ-VS 460
+ F +E+ +A+ HEN +LLG+ + LV+ Y NG+L + L + +S
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLC--LVYVYMPNGSLLDRLSCLDGTPPLS 131
Query: 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR-S 519
W R KI G A G+ +LH ++ S+ + L E F+ K+ DF LAR S
Sbjct: 132 WHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFG-----LARAS 183
Query: 520 EKNPGTLGSQGAI----CILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-- 573
EK T+ + + P +L + + +IY+FGV+LLEII+G P + +
Sbjct: 184 EKFAQTVMXXRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHREPQL 242
Query: 574 LVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
L+D ++ + + + +D ++ ++ + V + C++ KRP ++++ +L+
Sbjct: 243 LLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 137/300 (45%), Gaps = 28/300 (9%)
Query: 350 FSRQELEVACEDFS--------NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYL 401
FS EL+ +F N +G +VYKG + +AV L + T L
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 402 ELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQ-VS 460
+ F +E+ +A+ HEN +LLG+ + LV+ Y NG+L + L + +S
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLC--LVYVYMPNGSLLDRLSCLDGTPPLS 125
Query: 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
W R KI G A G+ +LH ++ S+ + L E F+ K+ DF LAR+
Sbjct: 126 WHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFG-----LARAS 177
Query: 521 KNPGTLGSQGAIC-----ILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-- 573
+ I + P +L + + +IY+FGV+LLEII+G P + +
Sbjct: 178 EKFAQXVMXXRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHREPQL 236
Query: 574 LVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
L+D ++ + + + +D ++ ++ + V + C++ KRP ++++ +L+
Sbjct: 237 LLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 120/268 (44%), Gaps = 27/268 (10%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
++KG +G +I V L +++ W+ F E L +H N +LG C+
Sbjct: 26 LWKGRWQGN-DIVVKVLKVRD--WSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493
L+ + G+LY LH G V ++ +K + +ARG+ +LHT L P LNS
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT-LEPLIPRHALNS 141
Query: 494 SAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQ---GNI 550
+V + ED + ++ D + S ++PG + + + P +L+ + D ++
Sbjct: 142 RSVMIDEDMTARISMAD-----VKFSFQSPGRMYAPAWVA--PEALQKKPEDTNRRSADM 194
Query: 551 YAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLE-LPEVMSYVVDPELKHFSYDDLKVICE 609
++F VLL E+++ P D N+ K LE L + + P + +
Sbjct: 195 WSFAVLLWELVTREVPFA-DLSNMEIGMKVALEGLRPTIPPGISPH-----------VSK 242
Query: 610 VVNLCVNPDITKRPSMQELCTMLEGRID 637
++ +C+N D KRP + +LE D
Sbjct: 243 LMKICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 132/300 (44%), Gaps = 28/300 (9%)
Query: 350 FSRQELEVACEDFS--------NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYL 401
FS EL+ +F N G +VYKG + +AV L + T L
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 402 ELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQ-VS 460
+ F +E+ A+ HEN +LLG+ + LV+ Y NG+L + L + +S
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLC--LVYVYXPNGSLLDRLSCLDGTPPLS 122
Query: 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
W R KI G A G+ +LH ++ S+ + L E F+ K+ DF LAR+
Sbjct: 123 WHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFG-----LARAS 174
Query: 521 KNPGTLGSQGAIC-----ILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-- 573
+ I P +L + + +IY+FGV+LLEII+G P + +
Sbjct: 175 EKFAQXVXXSRIVGTTAYXAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHREPQL 233
Query: 574 LVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
L+D ++ + + + +D + ++ V + C++ KRP ++++ +L+
Sbjct: 234 LLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 113/268 (42%), Gaps = 27/268 (10%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
++KG +G +I V L +++ W+ F E L +H N +LG C+
Sbjct: 26 LWKGRWQGN-DIVVKVLKVRD--WSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493
L+ + G+LY LH G V ++ +K + ARG +LHT L P LNS
Sbjct: 83 HPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHT-LEPLIPRHALNS 141
Query: 494 SAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQ---GNI 550
+V + ED + ++ D + S ++PG + + P +L+ + D +
Sbjct: 142 RSVXIDEDXTARISXAD-----VKFSFQSPGRXYAPAWVA--PEALQKKPEDTNRRSADX 194
Query: 551 YAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLE-LPEVMSYVVDPELKHFSYDDLKVICE 609
++F VLL E+++ P D N K LE L + + P + +
Sbjct: 195 WSFAVLLWELVTREVPFA-DLSNXEIGXKVALEGLRPTIPPGISPH-----------VSK 242
Query: 610 VVNLCVNPDITKRPSMQELCTMLEGRID 637
+ +C N D KRP + +LE D
Sbjct: 243 LXKICXNEDPAKRPKFDXIVPILEKXQD 270
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 126/288 (43%), Gaps = 44/288 (15%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IG+ V++ G ++AV L ++ H E F REVA + R+ H N +G
Sbjct: 45 IGAGSFGTVHRAEWHGS-DVAVKILMEQDFHAERVNE--FLREVAIMKRLRHPNIVLFMG 101
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHY-GERCQVSWTRRMKIVIGIARGLKYLHTELGP 484
+ P +V +Y S G+LY LH G R Q+ RR+ + +A+G+ YLH P
Sbjct: 102 AV--TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NP 158
Query: 485 PFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAI----CILPSSLE 540
P L S + + + ++ K+ DF L+R K L S+ A + P L
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFG-----LSRL-KASTFLSSKSAAGTPEWMAPEVLR 212
Query: 541 ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL--------VDWAKDYLELPEVMSYVV 592
+ + ++Y+FGV+L E+ + + P GNL V + LE+P +
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQPW----GNLNPAQVVAAVGFKCKRLEIPRNL---- 264
Query: 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640
+P+ + ++ C + KRPS + +L I +++
Sbjct: 265 NPQ-----------VAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IG+ V++ G ++AV L ++ H E F REVA + R+ H N +G
Sbjct: 45 IGAGSFGTVHRAEWHGS-DVAVKILMEQDFHAERVNE--FLREVAIMKRLRHPNIVLFMG 101
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHY-GERCQVSWTRRMKIVIGIARGLKYLHTELGP 484
+ P +V +Y S G+LY LH G R Q+ RR+ + +A+G+ YLH P
Sbjct: 102 AV--TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NP 158
Query: 485 PFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAI----CILPSSLE 540
P +L S + + + ++ K+ DF L+R K L S+ A + P L
Sbjct: 159 PIVHRDLKSPNLLVDKKYTVKVCDFG-----LSRL-KASXFLXSKXAAGTPEWMAPEVLR 212
Query: 541 ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL--------VDWAKDYLELPEVMSYVV 592
+ + ++Y+FGV+L E+ + + P GNL V + LE+P +
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQPW----GNLNPAQVVAAVGFKCKRLEIPRNL---- 264
Query: 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640
+P+ + ++ C + KRPS + +L I +++
Sbjct: 265 NPQ-----------VAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 116/272 (42%), Gaps = 23/272 (8%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IGS VYKG G + ++++ T F+ EV L + H N +G
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAP----TPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP 485
Y S+ +V + +LY HLH E + + + I ARG+ YLH +
Sbjct: 76 Y---STKPQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAK---S 128
Query: 486 FTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSL----EA 541
+L S+ ++L ED + K+ DF T+ +R + G+I + + ++
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDF-GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 187
Query: 542 RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601
Q ++YAFG++L E+++G+ P ++ +E+ V + P+L
Sbjct: 188 NPYSFQSDVYAFGIVLYELMTGQLPYSN-----INNRDQIIEM--VGRGSLSPDLSKVRS 240
Query: 602 DDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+ K + ++ C+ +RPS + +E
Sbjct: 241 NCPKRMKRLMAECLKKKRDERPSFPRILAEIE 272
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQ-VSWTR 463
F E+ L+R+NH N KL G C LV +YA G+LY LH E +
Sbjct: 49 FIVELRQLSRVNHPNIVKLYGACLNPV----CLVMEYAEGGSLYNVLHGAEPLPYYTAAH 104
Query: 464 RMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP-KLVDFDSWKTILARSEKN 522
M + ++G+ YLH+ +L + L + K+ DF + I N
Sbjct: 105 AMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN 164
Query: 523 PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL--VDWAKD 580
G+ A + P E + + +++++G++L E+I+ R P + G + WA
Sbjct: 165 KGS-----AAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA-- 217
Query: 581 YLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTML 632
V + P +K+ K I ++ C + D ++RPSM+E+ ++
Sbjct: 218 ------VHNGTRPPLIKNLP----KPIESLMTRCWSKDPSQRPSMEEIVKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 25/232 (10%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQ-VSWTR 463
F E+ L+R+NH N KL G C LV +YA G+LY LH E +
Sbjct: 48 FIVELRQLSRVNHPNIVKLYGACLNPV----CLVMEYAEGGSLYNVLHGAEPLPYYTAAH 103
Query: 464 RMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP-KLVDFDSWKTILARSEKN 522
M + ++G+ YLH+ +L + L + K+ DF + I N
Sbjct: 104 AMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN 163
Query: 523 PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL--VDWAKD 580
G+ A + P E + + +++++G++L E+I+ R P + G + WA
Sbjct: 164 KGS-----AAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVH 218
Query: 581 YLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTML 632
P ++ + P I ++ C + D ++RPSM+E+ ++
Sbjct: 219 NGTRPPLIKNLPKP------------IESLMTRCWSKDPSQRPSMEEIVKIM 258
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 119/273 (43%), Gaps = 25/273 (9%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IGS VYKG G ++AV L + T F+ EV L + H N +G
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP 485
Y S+ +V + +LY HLH E + + + I ARG+ YLH +
Sbjct: 88 Y---STKPQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAK---S 140
Query: 486 FTISELNSSAVYLTEDFSPKLVDFD--SWKTILARSEKNPGTLGSQGAICILPSSLEARH 543
+L S+ ++L ED + K+ DF + K+ + S + GS + + P + +
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGS--ILWMAPEVIRMQD 198
Query: 544 LD---VQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600
+ Q ++YAFG++L E+++G+ P ++ +E+ V + P+L
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSN-----INNRDQIIEM--VGRGSLSPDLSKVR 251
Query: 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+ K + ++ C+ +RPS + +E
Sbjct: 252 SNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 118/273 (43%), Gaps = 25/273 (9%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IGS VYKG G + ++++ T F+ EV L + H N +G
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAP----TPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP 485
Y S+ +V + +LY HLH E + + + I ARG+ YLH +
Sbjct: 88 Y---STAPQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAK---S 140
Query: 486 FTISELNSSAVYLTEDFSPKLVDFD--SWKTILARSEKNPGTLGSQGAICILPSSLEARH 543
+L S+ ++L ED + K+ DF + K+ + S + GS + + P + +
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGS--ILWMAPEVIRMQD 198
Query: 544 LD---VQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600
+ Q ++YAFG++L E+++G+ P ++ +E+ V + P+L
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSN-----INNRDQIIEM--VGRGSLSPDLSKVR 251
Query: 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+ K + ++ C+ +RPS + +E
Sbjct: 252 SNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IGS VYKG G ++AV L + T F+ EV L + H N +G
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP 485
Y S+ +V + +LY HLH E + + + I A+G+ YLH +
Sbjct: 72 Y---STAPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---S 124
Query: 486 FTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSL----EA 541
+L S+ ++L ED + K+ DF T+ +R + G+I + + +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDF-GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 542 RHLDVQGNIYAFGVLLLEIISGRPP 566
Q ++YAFG++L E+++G+ P
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 104/216 (48%), Gaps = 20/216 (9%)
Query: 361 DFSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKE-EHWTGYLELY--FQREVADLARIN 416
++ IG LV+KG + K +A+ SL + + E T +E + FQREV ++ +N
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
H N KL G +V ++ G LY L + + W+ ++++++ IA G++
Sbjct: 82 HPNIVKLYGLMHNPP----RMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIE 136
Query: 477 YLHTELGPPFTISELNSSAVYLT--EDFSP---KLVDFD-SWKTILARSEKNPGTLGSQG 530
Y+ + PP +L S ++L ++ +P K+ DF S +++ + S G LG+
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVS----GLLGNFQ 191
Query: 531 AICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
+ E + + Y+F ++L I++G P
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IGS VYKG G ++AV L + T F+ EV L + H N +G
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP 485
Y S+ +V + +LY HLH E + + + I A+G+ YLH +
Sbjct: 72 Y---STKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---S 124
Query: 486 FTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSL----EA 541
+L S+ ++L ED + K+ DF T+ +R + G+I + + +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDF-GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 542 RHLDVQGNIYAFGVLLLEIISGRPP 566
Q ++YAFG++L E+++G+ P
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IGS VYKG G ++AV L + T F+ EV L + H N +G
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP 485
Y S+ +V + +LY HLH E + + + I A+G+ YLH +
Sbjct: 77 Y---STKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---S 129
Query: 486 FTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSL----EA 541
+L S+ ++L ED + K+ DF T+ +R + G+I + + +
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDF-GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 188
Query: 542 RHLDVQGNIYAFGVLLLEIISGRPP 566
Q ++YAFG++L E+++G+ P
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IGS VYKG G ++AV L + T F+ EV L + H N +G
Sbjct: 43 IGSGSFGTVYKGKWHG--DVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP 485
Y S+ +V + +LY HLH E + + + I A+G+ YLH +
Sbjct: 99 Y---STKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---S 151
Query: 486 FTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSL----EA 541
+L S+ ++L ED + K+ DF T+ +R + G+I + + +
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDF-GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 210
Query: 542 RHLDVQGNIYAFGVLLLEIISGRPP 566
Q ++YAFG++L E+++G+ P
Sbjct: 211 NPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IGS VYKG G ++AV L + T F+ EV L + H N +G
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP 485
Y S+ +V + +LY HLH E + + + I A+G+ YLH +
Sbjct: 77 Y---STKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---S 129
Query: 486 FTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSL----EA 541
+L S+ ++L ED + K+ DF T+ +R + G+I + + +
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDF-GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 188
Query: 542 RHLDVQGNIYAFGVLLLEIISGRPP 566
Q ++YAFG++L E+++G+ P
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IGS VYKG G ++AV L + T F+ EV L + H N +G
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP 485
Y S+ +V + +LY HLH E + + + I A+G+ YLH +
Sbjct: 100 Y---STKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---S 152
Query: 486 FTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSL----EA 541
+L S+ ++L ED + K+ DF T+ +R + G+I + + +
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDF-GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 211
Query: 542 RHLDVQGNIYAFGVLLLEIISGRPP 566
Q ++YAFG++L E+++G+ P
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IGS VYKG G ++AV L + T F+ EV L + H N +G
Sbjct: 18 IGSGSFGTVYKGKWHG--DVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP 485
Y S+ +V + +LY HLH E + + + I A+G+ YLH +
Sbjct: 74 Y---STKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---S 126
Query: 486 FTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSL----EA 541
+L S+ ++L ED + K+ DF T+ +R + G+I + + +
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDF-GLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 185
Query: 542 RHLDVQGNIYAFGVLLLEIISGRPP 566
Q ++YAFG++L E+++G+ P
Sbjct: 186 NPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 104/216 (48%), Gaps = 20/216 (9%)
Query: 361 DFSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKE-EHWTGYLELY--FQREVADLARIN 416
++ IG LV+KG + K +A+ SL + + E T +E + FQREV ++ +N
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
H N KL G +V ++ G LY L + + W+ ++++++ IA G++
Sbjct: 82 HPNIVKLYGLMHNPP----RMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIE 136
Query: 477 YLHTELGPPFTISELNSSAVYLT--EDFSP---KLVDF-DSWKTILARSEKNPGTLGSQG 530
Y+ + PP +L S ++L ++ +P K+ DF S +++ + S G LG+
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVS----GLLGNFQ 191
Query: 531 AICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
+ E + + Y+F ++L I++G P
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 104/216 (48%), Gaps = 20/216 (9%)
Query: 361 DFSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKE-EHWTGYLELY--FQREVADLARIN 416
++ IG LV+KG + K +A+ SL + + E T +E + FQREV ++ +N
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
H N KL G +V ++ G LY L + + W+ ++++++ IA G++
Sbjct: 82 HPNIVKLYGLMHNPP----RMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIE 136
Query: 477 YLHTELGPPFTISELNSSAVYLT--EDFSP---KLVDFD-SWKTILARSEKNPGTLGSQG 530
Y+ + PP +L S ++L ++ +P K+ DF S +++ + S G LG+
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVS----GLLGNFQ 191
Query: 531 AICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
+ E + + Y+F ++L I++G P
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IGS VYKG G ++AV L + T F+ EV L + H N +G
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP 485
Y S+ +V + +LY HLH E + + + I A+G+ YLH +
Sbjct: 72 Y---STKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---S 124
Query: 486 FTISELNSSAVYLTEDFSPKLVDFD--SWKTILARSEKNPGTLGSQGAICILPSSLEARH 543
+L S+ ++L ED + K+ DF + K+ + S + GS + + P + +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGS--ILWMAPEVIRMQD 182
Query: 544 LD---VQGNIYAFGVLLLEIISGRPP 566
+ Q ++YAFG++L E+++G+ P
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IGS VYKG G ++AV L + T F+ EV L + H N +G
Sbjct: 36 IGSGSFGTVYKGKWHG--DVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP 485
Y S+ +V + +LY HLH E + + + I A+G+ YLH +
Sbjct: 92 Y---STKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---S 144
Query: 486 FTISELNSSAVYLTEDFSPKLVDFD--SWKTILARSEKNPGTLGSQGAICILPSSLEARH 543
+L S+ ++L ED + K+ DF + K+ + S + GS + + P + +
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGS--ILWMAPEVIRMQD 202
Query: 544 LD---VQGNIYAFGVLLLEIISGRPP 566
+ Q ++YAFG++L E+++G+ P
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IGS VYKG G ++AV L + T F+ EV L + H N +G
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP 485
Y S+ +V + +LY HLH E + + + I A+G+ YLH +
Sbjct: 100 Y---STKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---S 152
Query: 486 FTISELNSSAVYLTEDFSPKLVDFD--SWKTILARSEKNPGTLGSQGAICILPSSLEARH 543
+L S+ ++L ED + K+ DF + K+ + S + GS + + P + +
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGS--ILWMAPEVIRMQD 210
Query: 544 LD---VQGNIYAFGVLLLEIISGRPP 566
+ Q ++YAFG++L E+++G+ P
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 128/300 (42%), Gaps = 35/300 (11%)
Query: 347 VVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLE- 402
V++F+ E+ +C +IG+ VYKG +K G E+ V +K GY E
Sbjct: 34 VLKFT-TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLK----AGYTEK 88
Query: 403 --LYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVS 460
+ F E + + +H N +L G + P M++ +Y NG L + L + + S
Sbjct: 89 QRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM--MIITEYMENGALDKFLREKD-GEFS 145
Query: 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
+ + ++ GIA G+KYL + +L + + + + K+ DF + + E
Sbjct: 146 VLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 202
Query: 521 KNPGTLGSQGAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWA 578
T G + I P ++ R ++++FG+++ E+++ G P
Sbjct: 203 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP------------ 250
Query: 579 KDYLELP--EVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636
Y EL EVM + D D I +++ C + +RP ++ ++L+ I
Sbjct: 251 --YWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI 308
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 99/219 (45%), Gaps = 20/219 (9%)
Query: 354 ELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCI-KEEHWTGYLELYFQREVADL 412
E+E + S IGS VYKG G + ++ + E + F+ EVA L
Sbjct: 32 EIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQA-----FRNEVAVL 86
Query: 413 ARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIA 472
+ H N +GY + + +V + +LY+HLH E + + + I A
Sbjct: 87 RKTRHVNILLFMGYMTKDN---LAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTA 142
Query: 473 RGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFD--SWKTILARSEKNPGTLGSQG 530
+G+ YLH + ++ S+ ++L E + K+ DF + K+ + S++ GS
Sbjct: 143 QGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGS-- 197
Query: 531 AICILPSSLEARH---LDVQGNIYAFGVLLLEIISGRPP 566
+ + P + + Q ++Y++G++L E+++G P
Sbjct: 198 VLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 99/239 (41%), Gaps = 36/239 (15%)
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQ----VSW 461
++E A + H N L G C + LV ++A G L L G+R V+W
Sbjct: 54 RQEAKLFAMLKHPNIIALRGVCLKEPNLC--LVMEFARGGPLNRVLS-GKRIPPDILVNW 110
Query: 462 TRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-----DFSPKLVDFDSWKTIL 516
+ IARG+ YLH E P +L SS + + + D S K++ + L
Sbjct: 111 A------VQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG--L 162
Query: 517 ARSEKNPGTLGSQGAICIL-PSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV 575
AR + + GA + P + A +++++GVLL E+++G P G V
Sbjct: 163 AREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV 222
Query: 576 DW--AKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTML 632
+ A + L LP + S +P +++ C NPD RPS + L
Sbjct: 223 AYGVAMNKLALP-IPSTCPEP------------FAKLMEDCWNPDPHSRPSFTNILDQL 268
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 108/237 (45%), Gaps = 21/237 (8%)
Query: 337 IYIDSEILKD---VVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMK--GGPEIAVISLC 391
I+ID +D VR +E++++C +IG+ V G +K G EI V
Sbjct: 9 IFIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKT 68
Query: 392 IKEEHWTGYLELY---FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLY 448
+K +GY E F E + + + +H N L G +S+P M++ ++ NG+L
Sbjct: 69 LK----SGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPV--MIITEFMENGSLD 122
Query: 449 EHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVD 508
L + Q + + + ++ GIA G+KYL + +L + + + + K+ D
Sbjct: 123 SFLRQND-GQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVSD 178
Query: 509 FDSWKTILARSEKNPGTLGSQGAICI---LPSSLEARHLDVQGNIYAFGVLLLEIIS 562
F + + + T G I I P +++ R +++++G+++ E++S
Sbjct: 179 FGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 125/292 (42%), Gaps = 31/292 (10%)
Query: 353 QELEVACEDFSNIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLELY---FQR 407
+E+E +C +IG+ V G +K G E+ V +K GY E F
Sbjct: 17 KEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLK----VGYTEKQRRDFLG 72
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKI 467
E + + + +H N L G +S P M+V +Y NG+L L + Q + + + +
Sbjct: 73 EASIMGQFDHPNIIHLEGVVTKSKPV--MIVTEYMENGSLDTFLKKND-GQFTVIQLVGM 129
Query: 468 VIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLG 527
+ GI+ G+KYL +++G + +L + + + + K+ DF + + E T G
Sbjct: 130 LRGISAGMKYL-SDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 186
Query: 528 SQGAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS--GRPPCCKDKGNLVDWAKDYLEL 584
+ I P ++ R +++++G+++ E++S RP +++ ++ L
Sbjct: 187 GKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRL 246
Query: 585 PEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636
P M D + +++ C + RP E+ ML+ I
Sbjct: 247 PSPM-------------DCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLI 285
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F +E A + I H N +LLG C PF ++ ++ + G L ++L R +VS
Sbjct: 54 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + I+ ++YL + F +L + + E+ K+ DF + L +
Sbjct: 112 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL--SRLMTGDTXTA 166
Query: 525 TLGSQGAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G++ I P SL ++ +++AFGVLL EI +
Sbjct: 167 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F +E A + I H N +LLG C PF ++ ++ + G L ++L R +VS
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + I+ ++YL + F +L + + E+ K+ DF + L +
Sbjct: 114 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL--SRLMTGDTYTA 168
Query: 525 TLGSQGAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G++ I P SL ++ +++AFGVLL EI +
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 8/159 (5%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F +E A + I H N +LLG C PF ++ ++ + G L ++L R +V+
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + I+ ++YL + F +L + + E+ K+ DF + + + P
Sbjct: 116 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPA 172
Query: 525 TLGSQGAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G++ I P SL ++ +++AFGVLL EI +
Sbjct: 173 --GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 8/159 (5%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F +E A + I H N +LLG C PF ++ ++ + G L ++L R +V+
Sbjct: 57 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + I+ ++YL + F +L + + E+ K+ DF + + + P
Sbjct: 115 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPA 171
Query: 525 TLGSQGAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G++ I P SL ++ +++AFGVLL EI +
Sbjct: 172 --GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F +E A + I H N +LLG C PF ++ ++ + G L ++L R +VS
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + I+ ++YL + F +L + + E+ K+ DF + L +
Sbjct: 114 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL--SRLMTGDTYTA 168
Query: 525 TLGSQGAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G++ I P SL ++ +++AFGVLL EI +
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 30/234 (12%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F E + + ++ H N +LLG E +V +Y + G+L ++L R +
Sbjct: 61 FLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL 119
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+K + + ++YL G F +L + V ++ED K+ DF K A S ++ G
Sbjct: 120 LKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE--ASSTQDTG 174
Query: 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLE 583
L + P +L + + ++++FG+LL EI S GR P Y
Sbjct: 175 KLPVK---WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP--------------YPR 217
Query: 584 LPEVMSYVVDPELKHFSYDDLK----VICEVVNLCVNPDITKRPSMQELCTMLE 633
+P + VV K + D + EV+ C + D RPS +L LE
Sbjct: 218 IP--LKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 269
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 30/234 (12%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F E + + ++ H N +LLG E +V +Y + G+L ++L R +
Sbjct: 46 FLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL 104
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+K + + ++YL G F +L + V ++ED K+ DF K A S ++ G
Sbjct: 105 LKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE--ASSTQDTG 159
Query: 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLE 583
L + P +L + + ++++FG+LL EI S GR P Y
Sbjct: 160 KLPVKWTA---PEALREKKFSTKSDVWSFGILLWEIYSFGRVP--------------YPR 202
Query: 584 LPEVMSYVVDPELKHFSYDDLK----VICEVVNLCVNPDITKRPSMQELCTMLE 633
+P + VV K + D + EV+ C + D RPS +L LE
Sbjct: 203 IP--LKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 254
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F +E A + I H N +LLG C PF ++ ++ + G L ++L R +VS
Sbjct: 54 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + I+ ++YL + F +L + + E+ K+ DF + L +
Sbjct: 112 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL--SRLMTGDTXTA 166
Query: 525 TLGSQGAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G++ I P SL ++ +++AFGVLL EI +
Sbjct: 167 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F +E A + I H N +LLG C PF ++ ++ + G L ++L R +V+
Sbjct: 57 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + I+ ++YL + F +L + + E+ K+ DF + L +
Sbjct: 115 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL--SRLMTGDTXTA 169
Query: 525 TLGSQGAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G++ I P SL ++ +++AFGVLL EI +
Sbjct: 170 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 59/129 (45%), Gaps = 15/129 (11%)
Query: 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGS 186
N TG IPP + N + LV ++L N L+G +P+ LG+L L +L L N L+G +P
Sbjct: 403 NNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ-- 460
Query: 187 NSGYTANIHGMYASSANLT-----GLCHLSQLKVADFSYNFFVGSIPK--------CLEY 233
Y + + +LT GL + + L S N G IPK +
Sbjct: 461 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILK 520
Query: 234 LPSTSFQGN 242
L + SF GN
Sbjct: 521 LSNNSFSGN 529
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 126 GTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183
G N ++G IP E+G+L GL ++L SN L GR+P + L L E+ L N L G +P
Sbjct: 664 GHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 23/117 (19%)
Query: 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSN 187
N L+G IP EIG++ L +NL N ++G +P E+G+L L L L N+L G +P
Sbjct: 642 NMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQ--- 698
Query: 188 SGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKC--LEYLPSTSFQGN 242
+ L+ L D S N G IP+ E P F N
Sbjct: 699 ------------------AMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNN 737
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184
N+LTG IP IG L L + L +N +G +PAELG+ SL L L+ N G +PA
Sbjct: 499 NNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 556
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 64/143 (44%), Gaps = 22/143 (15%)
Query: 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
+NQ GPIPP L L ++L N TG +P L G +L L L N GAVP
Sbjct: 256 SNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPF 313
Query: 186 SNSGYTANIHGMYASSANLTG------LCHLSQLKVADFSYNFFVGSIPKCLEY------ 233
G + + + SS N +G L + LKV D S+N F G +P+ L
Sbjct: 314 F--GSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLL 371
Query: 234 ---LPSTSFQGNCLQN--KDPKQ 251
L S +F G L N ++PK
Sbjct: 372 TLDLSSNNFSGPILPNLCQNPKN 394
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 23/110 (20%)
Query: 127 TNQLTGPIPPEI--GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184
+N +GPI P + L ++ LQ+NG TG++P L N L LHL N L G +P+
Sbjct: 377 SNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPS 436
Query: 185 GSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYL 234
L LS+L+ N G IP+ L Y+
Sbjct: 437 ---------------------SLGSLSKLRDLKLWLNMLEGEIPQELMYV 465
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 53/142 (37%), Gaps = 41/142 (28%)
Query: 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAEL------------------------ 162
N +G IP E+G+ L+ ++L +N G +PA +
Sbjct: 523 NNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDG 582
Query: 163 --------GNLISLEELHLDR-NRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQL 213
GNL+ + + ++ NRL P T+ ++G + S + +
Sbjct: 583 MKKECHGAGNLLEFQGIRSEQLNRLSTRNPC----NITSRVYGGHTSPT----FDNNGSM 634
Query: 214 KVADFSYNFFVGSIPKCLEYLP 235
D SYN G IPK + +P
Sbjct: 635 MFLDMSYNMLSGYIPKEIGSMP 656
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 9/113 (7%)
Query: 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGS 186
N G +PP G+ + L + L SN +G LP + L + L+ L L N G +P S
Sbjct: 304 NHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE-S 362
Query: 187 NSGYTANIHGMYASSANLTG-----LCH--LSQLKVADFSYNFFVGSIPKCLE 232
+ +A++ + SS N +G LC + L+ N F G IP L
Sbjct: 363 LTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS 415
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F +E A + I H N +LLG C PF ++ ++ + G L ++L R +VS
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + I+ ++YL + F +L + + E+ K+ DF + L +
Sbjct: 114 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL--SRLMTGDTYTA 168
Query: 525 TLGSQGAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G++ I P SL ++ +++AFGVLL EI +
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 126 GTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183
G N ++G IP E+G+L GL ++L SN L GR+P + L L E+ L N L G +P
Sbjct: 661 GHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 59/129 (45%), Gaps = 15/129 (11%)
Query: 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGS 186
N TG IPP + N + LV ++L N L+G +P+ LG+L L +L L N L+G +P
Sbjct: 400 NNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIP--Q 457
Query: 187 NSGYTANIHGMYASSANLT-----GLCHLSQLKVADFSYNFFVGSIPK--------CLEY 233
Y + + +LT GL + + L S N G IPK +
Sbjct: 458 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILK 517
Query: 234 LPSTSFQGN 242
L + SF GN
Sbjct: 518 LSNNSFSGN 526
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 23/117 (19%)
Query: 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSN 187
N L+G IP EIG++ L +NL N ++G +P E+G+L L L L N+L G +P
Sbjct: 639 NMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQ--- 695
Query: 188 SGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKC--LEYLPSTSFQGN 242
+ L+ L D S N G IP+ E P F N
Sbjct: 696 ------------------AMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNN 734
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184
N+LTG IP IG L L + L +N +G +PAELG+ SL L L+ N G +PA
Sbjct: 496 NNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 553
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 64/143 (44%), Gaps = 22/143 (15%)
Query: 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAEL-GNLISLEELHLDRNRLQGAVPAG 185
+NQ GPIPP L L ++L N TG +P L G +L L L N GAVP
Sbjct: 253 SNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPF 310
Query: 186 SNSGYTANIHGMYASSANLTG------LCHLSQLKVADFSYNFFVGSIPKCLEY------ 233
G + + + SS N +G L + LKV D S+N F G +P+ L
Sbjct: 311 F--GSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLL 368
Query: 234 ---LPSTSFQGNCLQN--KDPKQ 251
L S +F G L N ++PK
Sbjct: 369 TLDLSSNNFSGPILPNLCQNPKN 391
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 23/110 (20%)
Query: 127 TNQLTGPIPPEI--GNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184
+N +GPI P + L ++ LQ+NG TG++P L N L LHL N L G +P+
Sbjct: 374 SNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPS 433
Query: 185 GSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYL 234
L LS+L+ N G IP+ L Y+
Sbjct: 434 ---------------------SLGSLSKLRDLKLWLNMLEGEIPQELMYV 462
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 53/142 (37%), Gaps = 41/142 (28%)
Query: 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAEL------------------------ 162
N +G IP E+G+ L+ ++L +N G +PA +
Sbjct: 520 NNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDG 579
Query: 163 --------GNLISLEELHLDR-NRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQL 213
GNL+ + + ++ NRL P T+ ++G + S + +
Sbjct: 580 MKKECHGAGNLLEFQGIRSEQLNRLSTRNPC----NITSRVYGGHTSPT----FDNNGSM 631
Query: 214 KVADFSYNFFVGSIPKCLEYLP 235
D SYN G IPK + +P
Sbjct: 632 MFLDMSYNMLSGYIPKEIGSMP 653
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGS 186
N G +PP G+ + L + L SN +G LP + L + L+ L L N G +P S
Sbjct: 301 NHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE-S 359
Query: 187 NSGYTANIHGMYASSANLTG-----LCH--LSQLKVADFSYNFFVGSIPKCL 231
+ +A++ + SS N +G LC + L+ N F G IP L
Sbjct: 360 LTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL 411
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F +E A + I H N +LLG C PF ++ ++ + G L ++L R +VS
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVL 118
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + I+ ++YL + F +L + + E+ K+ DF + L +
Sbjct: 119 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL--SRLMTGDTYTA 173
Query: 525 TLGSQGAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G++ I P SL ++ +++AFGVLL EI +
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F +E A + I H N +LLG C PF ++ ++ + G L ++L R +VS
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + I+ ++YL + F +L + + E+ K+ DF + L +
Sbjct: 114 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL--SRLMTGDTYTA 168
Query: 525 TLGSQGAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G++ I P SL ++ +++AFGVLL EI +
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F +E A + I H N +LLG C PF ++ ++ + G L ++L R +V+
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIIIEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + I+ ++YL + F +L + + E+ K+ DF + L +
Sbjct: 119 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL--SRLMTGDTYTA 173
Query: 525 TLGSQGAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G++ I P SL ++ +++AFGVLL EI +
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F +E A + I H N +LLG C PF ++ ++ + G L ++L R +VS
Sbjct: 54 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + I+ ++YL + F +L + + E+ K+ DF + L +
Sbjct: 112 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL--SRLMTGDTFTA 166
Query: 525 TLGSQGAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G++ I P SL ++ +++AFGVLL EI +
Sbjct: 167 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED--TMEVE-EFLKEA 65
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +V+ + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQ 529
I+ ++YL + F +L + + E+ K+ DF + L + G++
Sbjct: 124 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL--SRLMTGDTXTAHAGAK 178
Query: 530 GAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
I P SL ++ +++AFGVLL EI +
Sbjct: 179 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 15/212 (7%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY +S TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 66 RHPNILRLYGYFHDS---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 120
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICI 534
L Y H++ ++ + L K+ DF W ++ A S + G+ +
Sbjct: 121 LSYCHSK---KVIHRDIKPENLLLGSAGELKIADF-GW-SVHAPSSRRAALCGTLDYLP- 174
Query: 535 LPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
P +E R D + ++++ GVL E + G+PP
Sbjct: 175 -PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 127/300 (42%), Gaps = 32/300 (10%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED--TMEVEE-FLKEA 267
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +VS + +
Sbjct: 268 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 325
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQ 529
I+ ++YL + F L + + E+ K+ DF + L + G++
Sbjct: 326 QISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFG--LSRLMTGDTYTAHAGAK 380
Query: 530 GAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCK-DKGNLVD-WAKDY-LEL 584
I P SL ++ +++AFGVLL EI + G P D + + KDY +E
Sbjct: 381 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 440
Query: 585 PEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI-DTSISVE 643
PE PE + E++ C + + RPS E+ E ++SIS E
Sbjct: 441 PEGC-----PE----------KVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 485
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 19/161 (11%)
Query: 416 NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH--------------YGERCQVSW 461
H+N LLG C + P ++ +YAS G L E+L + Q+S
Sbjct: 92 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSS 149
Query: 462 TRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521
+ +ARG++YL ++ +L + V +TED K+ DF + I
Sbjct: 150 KDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXX 206
Query: 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
T G + P +L R Q ++++FGVLL EI +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED--TMEVEE-FLKEA 64
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +V+ + +
Sbjct: 65 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 122
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQ 529
I+ ++YL + F +L + + E+ K+ DF + L + G++
Sbjct: 123 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL--SRLMTGDTYTAHAGAK 177
Query: 530 GAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
I P SL ++ +++AFGVLL EI +
Sbjct: 178 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 98/234 (41%), Gaps = 30/234 (12%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F E + + ++ H N +LLG E +V +Y + G+L ++L R +
Sbjct: 52 FLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL 110
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+K + + ++YL G F +L + V ++ED K+ DF K A S ++ G
Sbjct: 111 LKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE--ASSTQDTG 165
Query: 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLE 583
L + P +L + ++++FG+LL EI S GR P Y
Sbjct: 166 KLPVK---WTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVP--------------YPR 208
Query: 584 LPEVMSYVVDPELKHFSYDDLK----VICEVVNLCVNPDITKRPSMQELCTMLE 633
+P + VV K + D + EV+ C + D RPS +L LE
Sbjct: 209 IP--LKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 260
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED--TMEVEE-FLKEA 65
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +V+ + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQ 529
I+ ++YL + F +L + + E+ K+ DF + L + G++
Sbjct: 124 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL--SRLMTGDTYTAHAGAK 178
Query: 530 GAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
I P SL ++ +++AFGVLL EI +
Sbjct: 179 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED--TMEVEE-FLKEA 60
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +V+ + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQ 529
I+ ++YL + F +L + + E+ K+ DF + L + G++
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL--SRLMTGDTYTAHAGAK 173
Query: 530 GAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
I P SL ++ +++AFGVLL EI +
Sbjct: 174 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F +E A + I H N +LLG C PF ++ ++ + G L ++L R +V+
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVL 113
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + I+ ++YL + F +L + + E+ K+ DF + L +
Sbjct: 114 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL--SRLMTGDTYTA 168
Query: 525 TLGSQGAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G++ I P SL ++ +++AFGVLL EI +
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F +E A + I H N +LLG C PF ++ ++ + G L ++L R +V+
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + I+ ++YL + F +L + + E+ K+ DF + L +
Sbjct: 119 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL--SRLMTGDTYTA 173
Query: 525 TLGSQGAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G++ I P SL ++ +++AFGVLL EI +
Sbjct: 174 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F +E A + I H N +LLG C PF +V +Y G L ++L R +V+
Sbjct: 75 FLKEAAVMKEIKHPNLVQLLGVCTLEPPF--YIVTEYMPYGNLLDYLRECNREEVTAVVL 132
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + I+ ++YL + F +L + + E+ K+ DF + L +
Sbjct: 133 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGL--SRLMTGDTYTA 187
Query: 525 TLGSQGAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G++ I P SL ++ +++AFGVLL EI +
Sbjct: 188 HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F +E A + I H N +LLG C PF ++ ++ + G L ++L R +V+
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + I+ ++YL + F +L + + E+ K+ DF + L +
Sbjct: 116 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL--SRLMTGDTYTA 170
Query: 525 TLGSQGAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G++ I P SL ++ +++AFGVLL EI +
Sbjct: 171 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 10/163 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F E + + ++ H N +LLG E +V +Y + G+L ++L R +
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL 291
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+K + + ++YL G F +L + V ++ED K+ DF K A S ++ G
Sbjct: 292 LKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE--ASSTQDTG 346
Query: 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
L + P +L + + ++++FG+LL EI S GR P
Sbjct: 347 KLPVKWTA---PEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F +E A + I H N +LLG C PF ++ ++ + G L ++L R +V+
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + I+ ++YL + F +L + + E+ K+ DF + L +
Sbjct: 116 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL--SRLMTGDTYTA 170
Query: 525 TLGSQGAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G++ I P SL ++ +++AFGVLL EI +
Sbjct: 171 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 19/161 (11%)
Query: 416 NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE--------------RCQVSW 461
H+N LLG C + P ++ +YAS G L E+L E Q+S
Sbjct: 92 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSS 149
Query: 462 TRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521
+ +ARG++YL ++ +L + V +TED K+ DF + I
Sbjct: 150 KDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
T G + P +L R Q ++++FGVLL EI +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 19/161 (11%)
Query: 416 NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYG-----ERC---------QVSW 461
H+N LLG C + P ++ +YAS G L E+L E C Q+S
Sbjct: 77 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 134
Query: 462 TRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521
+ +ARG++YL ++ +L + V +TED K+ DF + I
Sbjct: 135 KDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 191
Query: 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
T G + P +L R Q ++++FGVLL EI +
Sbjct: 192 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F +E A + I H N +LLG C PF ++ ++ + G L ++L R +V+
Sbjct: 69 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVL 126
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + I+ ++YL + F +L + + E+ K+ DF + L +
Sbjct: 127 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL--SRLMTGDTYTA 181
Query: 525 TLGSQGAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G++ I P SL ++ +++AFGVLL EI +
Sbjct: 182 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 19/161 (11%)
Query: 416 NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYG-----ERC---------QVSW 461
H+N LLG C + P ++ +YAS G L E+L E C Q+S
Sbjct: 92 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 149
Query: 462 TRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521
+ +ARG++YL ++ +L + V +TED K+ DF + I
Sbjct: 150 KDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
T G + P +L R Q ++++FGVLL EI +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 19/161 (11%)
Query: 416 NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH--------------YGERCQVSW 461
H+N LLG C + P ++ +YAS G L E+L + Q+S
Sbjct: 84 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 141
Query: 462 TRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521
+ +ARG++YL ++ +L + V +TED K+ DF + I
Sbjct: 142 KDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 198
Query: 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
T G + P +L R Q ++++FGVLL EI +
Sbjct: 199 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 19/161 (11%)
Query: 416 NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH--------------YGERCQVSW 461
H+N LLG C + P ++ +YAS G L E+L + Q+S
Sbjct: 81 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 138
Query: 462 TRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521
+ +ARG++YL ++ +L + V +TED K+ DF + I
Sbjct: 139 KDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 195
Query: 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
T G + P +L R Q ++++FGVLL EI +
Sbjct: 196 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 19/161 (11%)
Query: 416 NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH--------------YGERCQVSW 461
H+N LLG C + P ++ +YAS G L E+L + Q+S
Sbjct: 92 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 149
Query: 462 TRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521
+ +ARG++YL ++ +L + V +TED K+ DF + I
Sbjct: 150 KDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
T G + P +L R Q ++++FGVLL EI +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 19/161 (11%)
Query: 416 NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH--------------YGERCQVSW 461
H+N LLG C + P ++ +YAS G L E+L + Q+S
Sbjct: 85 KHKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 142
Query: 462 TRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521
+ +ARG++YL ++ +L + V +TED K+ DF + I
Sbjct: 143 KDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 199
Query: 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
T G + P +L R Q ++++FGVLL EI +
Sbjct: 200 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 127/300 (42%), Gaps = 32/300 (10%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED--TMEVEE-FLKEA 264
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +V+ + +
Sbjct: 265 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 322
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQ 529
I+ ++YL + F L + + E+ K+ DF + L + G++
Sbjct: 323 QISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGL--SRLMTGDTYTAHAGAK 377
Query: 530 GAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCK-DKGNLVD-WAKDY-LEL 584
I P SL ++ +++AFGVLL EI + G P D + + KDY +E
Sbjct: 378 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 437
Query: 585 PEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI-DTSISVE 643
PE PE + E++ C + + RPS E+ E ++SIS E
Sbjct: 438 PEGC-----PE----------KVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 482
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 127/297 (42%), Gaps = 26/297 (8%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREV 409
+ + E+E + +G VY+G K + V +KE+ T +E F +E
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKED--TMEVEE-FLKEA 306
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
A + I H N +LLG C PF ++ ++ + G L ++L R +V+ + +
Sbjct: 307 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 364
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQ 529
I+ ++YL + F L + + E+ K+ DF + L + G++
Sbjct: 365 QISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGL--SRLMTGDTYTAHAGAK 419
Query: 530 GAI-CILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEV 587
I P SL ++ +++AFGVLL EI + G P +D ++ Y EL E
Sbjct: 420 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-----IDLSQVY-ELLEK 473
Query: 588 MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI-DTSISVE 643
+ PE + + E++ C + + RPS E+ E ++SIS E
Sbjct: 474 DYRMERPE------GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 524
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 19/160 (11%)
Query: 417 HENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH--------------YGERCQVSWT 462
H+N LLG C + P ++ +YAS G L E+L + Q+S
Sbjct: 134 HKNIINLLGACTQDGPL--YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 463 RRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522
+ +ARG++YL ++ +L + V +TED K+ DF + I
Sbjct: 192 DLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 248
Query: 523 PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
T G + P +L R Q ++++FGVLL EI +
Sbjct: 249 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 89/214 (41%), Gaps = 19/214 (8%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 92 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 146
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNP--GTLGSQGAI 532
L Y H++ ++ + L K+ DF W S ++ GTL
Sbjct: 147 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADF-GWSVHAPSSRRDDLCGTLD----- 197
Query: 533 CILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
+ P +E R D + ++++ GVL E + G+PP
Sbjct: 198 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 15/212 (7%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 69 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 123
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICI 534
L Y H++ ++ + L K+ DF W ++ A S + G+ +
Sbjct: 124 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADF-GW-SVHAPSSRRAALCGTLDYLP- 177
Query: 535 LPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
P +E R D + ++++ GVL E + G+PP
Sbjct: 178 -PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 15/212 (7%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 66 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 120
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICI 534
L Y H++ ++ + L K+ DF W ++ A S + G+ +
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADF-GW-SVHAPSSRRAALCGTLDYLP- 174
Query: 535 LPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
P +E R D + ++++ GVL E + G+PP
Sbjct: 175 -PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 89/214 (41%), Gaps = 19/214 (8%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 69 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 123
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNP--GTLGSQGAI 532
L Y H++ ++ + L K+ DF W S ++ GTL
Sbjct: 124 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADF-GWSVHAPSSRRDDLCGTLD----- 174
Query: 533 CILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
+ P +E R D + ++++ GVL E + G+PP
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 23/216 (10%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLH----YGERCQVSWTRRMKIVIG 470
H N +L GY ++ TR+ L+ +YA GT+Y L + E+ ++ + +
Sbjct: 71 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 471 IARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQG 530
+ +H ++ P + L S+ DF + S +T L GTL
Sbjct: 128 YCHSKRVIHRDIKPENLL--LGSAGELKIADFGWSVHAPSSRRTTLC------GTLD--- 176
Query: 531 AICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
+ P +E R D + ++++ GVL E + G+PP
Sbjct: 177 --YLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 118/287 (41%), Gaps = 29/287 (10%)
Query: 362 FSNIIGSSPDSLVYKGTM--KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN 419
F+ +IG VY GT+ G +I + G + + + + +H N
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-MKDFSHPN 93
Query: 420 TGKLLGYC--RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
LLG C E SP ++V Y +G L + E + + + +A+G+K+
Sbjct: 94 VLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKF 149
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS-EKNPGTLGSQGAICILP 536
L ++ F +L + L E F+ K+ DF + +L + + G++ + +
Sbjct: 150 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 537 -SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS--YVVD 593
SL+ + + ++++FGVLL E+++ P D N D L+ ++ Y D
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQPEYCPD 265
Query: 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640
P + EV+ C +P RPS EL + + T I
Sbjct: 266 P------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 300
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 89/214 (41%), Gaps = 19/214 (8%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 67 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 121
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNP--GTLGSQGAI 532
L Y H++ ++ + L K+ DF W S ++ GTL
Sbjct: 122 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADF-GWSVHAPSSRRDTLCGTLD----- 172
Query: 533 CILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
+ P +E R D + ++++ GVL E + G+PP
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 23/216 (10%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLH----YGERCQVSWTRRMKIVIG 470
H N +L GY ++ TR+ L+ +YA GT+Y L + E+ ++ + +
Sbjct: 92 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 471 IARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQG 530
+ +H ++ P + L S+ DF + S +T L GTL
Sbjct: 149 YCHSKRVIHRDIKPENLL--LGSAGELKIADFGWSVHAPSSRRTTLC------GTLD--- 197
Query: 531 AICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
+ P +E R D + ++++ GVL E + G+PP
Sbjct: 198 --YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 117/287 (40%), Gaps = 29/287 (10%)
Query: 362 FSNIIGSSPDSLVYKGTM--KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN 419
F+ +IG VY GT+ G +I + G + + + + +H N
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-MKDFSHPN 91
Query: 420 TGKLLGYC--RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
LLG C E SP ++V Y +G L + E + + + +A+G+KY
Sbjct: 92 VLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKY 147
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN-PGTLGSQGAICILP 536
L ++ F +L + L E F+ K+ DF + + + + G++ + +
Sbjct: 148 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 537 -SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS--YVVD 593
SL+ + + ++++FGVLL E+++ P D N D L+ ++ Y D
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQPEYCPD 263
Query: 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640
P + EV+ C +P RPS EL + + T I
Sbjct: 264 P------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 298
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 15/212 (7%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 66 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 120
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICI 534
L Y H++ ++ + L K+ DF W ++ A S + G+ +
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADF-GW-SVHAPSSRRTDLCGTLDYLP- 174
Query: 535 LPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
P +E R D + ++++ GVL E + G+PP
Sbjct: 175 -PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 15/212 (7%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 66 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 120
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICI 534
L Y H++ ++ + L K+ DF W ++ A S + G+ +
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADF-GW-SVHAPSSRRTDLCGTLDYLP- 174
Query: 535 LPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
P +E R D + ++++ GVL E + G+PP
Sbjct: 175 -PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 23/216 (10%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLH----YGERCQVSWTRRMKIVIG 470
H N +L GY ++ TR+ L+ +YA GT+Y L + E+ ++ + +
Sbjct: 69 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 471 IARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQG 530
+ +H ++ P + L S+ DF + S +T L GTL
Sbjct: 126 YCHSKRVIHRDIKPENLL--LGSAGELKIADFGWSVHAPSSRRTTLC------GTLD--- 174
Query: 531 AICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
+ P +E R D + ++++ GVL E + G+PP
Sbjct: 175 --YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 23/216 (10%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLH----YGERCQVSWTRRMKIVIG 470
H N +L GY ++ TR+ L+ +YA GT+Y L + E+ ++ + +
Sbjct: 83 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 139
Query: 471 IARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQG 530
+ +H ++ P + L S+ DF + S +T L GTL
Sbjct: 140 YCHSKRVIHRDIKPENLL--LGSAGELKIADFGWSVHAPSSRRTTLC------GTLD--- 188
Query: 531 AICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
+ P +E R D + ++++ GVL E + G+PP
Sbjct: 189 --YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 15/212 (7%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 67 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 121
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICI 534
L Y H++ ++ + L K+ DF W ++ A S + G+ +
Sbjct: 122 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADF-GW-SVHAPSSRRTDLCGTLDYLP- 175
Query: 535 LPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
P +E R D + ++++ GVL E + G+PP
Sbjct: 176 -PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 23/216 (10%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLH----YGERCQVSWTRRMKIVIG 470
H N +L GY ++ TR+ L+ +YA GT+Y L + E+ ++ + +
Sbjct: 66 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 471 IARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQG 530
+ +H ++ P + L S+ DF + S +T L GTL
Sbjct: 123 YCHSKRVIHRDIKPENLL--LGSAGELKIADFGWSVHAPSSRRTTLC------GTLD--- 171
Query: 531 AICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
+ P +E R D + ++++ GVL E + G+PP
Sbjct: 172 --YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 19/214 (8%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 66 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 120
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNP--GTLGSQGAI 532
L Y H++ ++ + L K+ DF W S + GTL
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADF-GWSVHAPSSRRTELCGTLD----- 171
Query: 533 CILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
+ P +E R D + ++++ GVL E + G+PP
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 15/212 (7%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 71 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 125
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICI 534
L Y H++ ++ + L K+ DF W ++ A S + G+ +
Sbjct: 126 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADF-GW-SVHAPSSRRTDLCGTLDYLP- 179
Query: 535 LPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
P +E R D + ++++ GVL E + G+PP
Sbjct: 180 -PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 23/216 (10%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLH----YGERCQVSWTRRMKIVIG 470
H N +L GY ++ TR+ L+ +YA GT+Y L + E+ ++ + +
Sbjct: 71 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 471 IARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQG 530
+ +H ++ P + L S+ DF + S +T L GTL
Sbjct: 128 YCHSKRVIHRDIKPENLL--LGSAGELKIADFGWSVHAPSSRRTTLC------GTLD--- 176
Query: 531 AICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
+ P +E R D + ++++ GVL E + G+PP
Sbjct: 177 --YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 15/212 (7%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 65 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 119
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICI 534
L Y H++ ++ + L K+ DF W ++ A S + G+ +
Sbjct: 120 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADF-GW-SVHAPSSRRTTLCGTLDYLP- 173
Query: 535 LPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
P +E R D + ++++ GVL E + G+PP
Sbjct: 174 -PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 15/212 (7%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 66 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 120
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICI 534
L Y H++ ++ + L K+ DF W ++ A S + G+ +
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADF-GW-SVHAPSSRRXXLCGTLDYLP- 174
Query: 535 LPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
P +E R D + ++++ GVL E + G+PP
Sbjct: 175 -PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 19/214 (8%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 70 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 124
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNP--GTLGSQGAI 532
L Y H++ ++ + L K+ DF W S + GTL
Sbjct: 125 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADF-GWSVHAPSSRRTTLCGTLD----- 175
Query: 533 CILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
+ P +E R D + ++++ GVL E + G+PP
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 15/212 (7%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 66 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 120
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICI 534
L Y H++ ++ + L K+ DF W ++ A S + G+ +
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADF-GW-SVHAPSSRRTXLCGTLDYLP- 174
Query: 535 LPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
P +E R D + ++++ GVL E + G+PP
Sbjct: 175 -PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 15/212 (7%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 68 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 122
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICI 534
L Y H++ ++ + L K+ DF W ++ A S + G+ +
Sbjct: 123 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADF-GW-SVHAPSSRRXXLCGTLDYLP- 176
Query: 535 LPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
P +E R D + ++++ GVL E + G+PP
Sbjct: 177 -PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 23/216 (10%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLH----YGERCQVSWTRRMKIVIG 470
H N +L GY ++ TR+ L+ +YA G +Y+ L + E+ ++ + +
Sbjct: 71 RHPNILRLYGYFHDA---TRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALS 127
Query: 471 IARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQG 530
+ +H ++ P + L S+ DF + S +T L GTL
Sbjct: 128 YCHSKRVIHRDIKPENLL--LGSAGELKIADFGWSVHAPSSRRTTLC------GTLD--- 176
Query: 531 AICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
+ P +E R D + ++++ GVL E + G+PP
Sbjct: 177 --YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 15/212 (7%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 69 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 123
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICI 534
L Y H++ ++ + L K+ DF W ++ A S + G+ +
Sbjct: 124 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADF-GW-SVHAPSSRRTTLCGTLDYLP- 177
Query: 535 LPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
P +E R D + ++++ GVL E + G+PP
Sbjct: 178 -PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 23/216 (10%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLH----YGERCQVSWTRRMKIVIG 470
H N +L GY ++ TR+ L+ +YA GT+Y L + E+ ++ + +
Sbjct: 67 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 471 IARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQG 530
+ +H ++ P + L S+ DF S +T L+ GTL
Sbjct: 124 YCHSKRVIHRDIKPENLL--LGSAGELKIADFGWSCHAPSSRRTTLS------GTLD--- 172
Query: 531 AICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
+ P +E R D + ++++ GVL E + G+PP
Sbjct: 173 --YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 15/212 (7%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA G +Y+ L + + R + +A
Sbjct: 71 RHPNILRLYGYFHDA---TRVYLILEYAPRGEVYKELQ--KLSKFDEQRTATYITELANA 125
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICI 534
L Y H++ ++ + L K+ DF W ++ A S + G+ +
Sbjct: 126 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADF-GW-SVHAPSSRRXXLXGTLDYLP- 179
Query: 535 LPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
P +E R D + ++++ GVL E + G+PP
Sbjct: 180 -PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 15/212 (7%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 69 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 123
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICI 534
L Y H++ ++ + L K+ DF W ++ A S + G+ +
Sbjct: 124 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADF-GW-SVHAPSSRRXXLCGTLDYLP- 177
Query: 535 LPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
P +E R D + ++++ GVL E + G+PP
Sbjct: 178 -PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 117/287 (40%), Gaps = 29/287 (10%)
Query: 362 FSNIIGSSPDSLVYKGTM--KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN 419
F+ +IG VY GT+ G +I + G + + + + +H N
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-MKDFSHPN 90
Query: 420 TGKLLGYC--RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
LLG C E SP ++V Y +G L + E + + + +A+G+KY
Sbjct: 91 VLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKY 146
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN-PGTLGSQGAICILP 536
L ++ F +L + L E F+ K+ DF + + + + G++ + +
Sbjct: 147 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 537 -SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS--YVVD 593
SL+ + + ++++FGVLL E+++ P D N D L+ ++ Y D
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQPEYCPD 262
Query: 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640
P + EV+ C +P RPS EL + + T I
Sbjct: 263 P------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 297
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 117/287 (40%), Gaps = 29/287 (10%)
Query: 362 FSNIIGSSPDSLVYKGTM--KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN 419
F+ +IG VY GT+ G +I + G + + + + +H N
Sbjct: 52 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-MKDFSHPN 110
Query: 420 TGKLLGYC--RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
LLG C E SP ++V Y +G L + E + + + +A+G+KY
Sbjct: 111 VLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKY 166
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN-PGTLGSQGAICILP 536
L ++ F +L + L E F+ K+ DF + + + + G++ + +
Sbjct: 167 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 537 -SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS--YVVD 593
SL+ + + ++++FGVLL E+++ P D N D L+ ++ Y D
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQPEYCPD 282
Query: 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640
P + EV+ C +P RPS EL + + T I
Sbjct: 283 P------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 317
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 117/287 (40%), Gaps = 29/287 (10%)
Query: 362 FSNIIGSSPDSLVYKGTM--KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN 419
F+ +IG VY GT+ G +I + G + + + + +H N
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-MKDFSHPN 92
Query: 420 TGKLLGYC--RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
LLG C E SP ++V Y +G L + E + + + +A+G+KY
Sbjct: 93 VLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKY 148
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN-PGTLGSQGAICILP 536
L ++ F +L + L E F+ K+ DF + + + + G++ + +
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 537 -SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS--YVVD 593
SL+ + + ++++FGVLL E+++ P D N D L+ ++ Y D
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQPEYCPD 264
Query: 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640
P + EV+ C +P RPS EL + + T I
Sbjct: 265 P------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 117/287 (40%), Gaps = 29/287 (10%)
Query: 362 FSNIIGSSPDSLVYKGTM--KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN 419
F+ +IG VY GT+ G +I + G + + + + +H N
Sbjct: 26 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-MKDFSHPN 84
Query: 420 TGKLLGYC--RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
LLG C E SP ++V Y +G L + E + + + +A+G+KY
Sbjct: 85 VLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKY 140
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN-PGTLGSQGAICILP 536
L ++ F +L + L E F+ K+ DF + + + + G++ + +
Sbjct: 141 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 537 -SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS--YVVD 593
SL+ + + ++++FGVLL E+++ P D N D L+ ++ Y D
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQPEYCPD 256
Query: 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640
P + EV+ C +P RPS EL + + T I
Sbjct: 257 P------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 291
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 13/163 (7%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH-YGERCQVSWTR 463
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ER + +
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER--IDHIK 118
Query: 464 RMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE--- 520
++ I +G++YL T+ + +L + + + + K+ DF K + E
Sbjct: 119 LLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 175
Query: 521 -KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
K P G P SL V ++++FGV+L E+ +
Sbjct: 176 VKEP---GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 15/212 (7%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
H N +L GY ++ TR+ L+ +YA GT+Y L + + R + +A
Sbjct: 63 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANA 117
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICI 534
L Y H++ ++ + L K+ DF W ++ A S + G+ +
Sbjct: 118 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADF-GW-SVHAPSSRRTTLCGTLDYLP- 171
Query: 535 LPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
P +E R D + ++++ GVL E + G+PP
Sbjct: 172 -PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 117/287 (40%), Gaps = 29/287 (10%)
Query: 362 FSNIIGSSPDSLVYKGTM--KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN 419
F+ +IG VY GT+ G +I + G + + + + +H N
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-MKDFSHPN 91
Query: 420 TGKLLGYC--RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
LLG C E SP ++V Y +G L + E + + + +A+G+KY
Sbjct: 92 VLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKY 147
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN-PGTLGSQGAICILP 536
L ++ F +L + L E F+ K+ DF + + + + G++ + +
Sbjct: 148 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 537 -SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS--YVVD 593
SL+ + + ++++FGVLL E+++ P D N D L+ ++ Y D
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQPEYCPD 263
Query: 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640
P + EV+ C +P RPS EL + + T I
Sbjct: 264 P------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 298
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 17/183 (9%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH-YGERC------ 457
F RE L + HE+ K G C E P ++VF+Y +G L + L +G
Sbjct: 62 FHREAELLTNLQHEHIVKFYGVCVEGDPL--IMVFEYMKHGDLNKFLRAHGPDAVLMAEG 119
Query: 458 ----QVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513
+++ ++ + I IA G+ YL ++ F +L + + E+ K+ DF +
Sbjct: 120 NPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSR 176
Query: 514 TILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKG 572
+ + G + P S+ R + ++++ GV+L EI + G+ P +
Sbjct: 177 DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN 236
Query: 573 NLV 575
N V
Sbjct: 237 NEV 239
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 117/287 (40%), Gaps = 29/287 (10%)
Query: 362 FSNIIGSSPDSLVYKGTM--KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN 419
F+ +IG VY GT+ G +I + G + + + + +H N
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-MKDFSHPN 87
Query: 420 TGKLLGYC--RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
LLG C E SP ++V Y +G L + E + + + +A+G+KY
Sbjct: 88 VLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKY 143
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN-PGTLGSQGAICILP 536
L ++ F +L + L E F+ K+ DF + + + + G++ + +
Sbjct: 144 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 537 -SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS--YVVD 593
SL+ + + ++++FGVLL E+++ P D N D L+ ++ Y D
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQPEYCPD 259
Query: 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640
P + EV+ C +P RPS EL + + T I
Sbjct: 260 P------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 117/287 (40%), Gaps = 29/287 (10%)
Query: 362 FSNIIGSSPDSLVYKGTM--KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN 419
F+ +IG VY GT+ G +I + G + + + + +H N
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-MKDFSHPN 92
Query: 420 TGKLLGYC--RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
LLG C E SP ++V Y +G L + E + + + +A+G+KY
Sbjct: 93 VLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKY 148
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN-PGTLGSQGAICILP 536
L ++ F +L + L E F+ K+ DF + + + + G++ + +
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 537 -SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS--YVVD 593
SL+ + + ++++FGVLL E+++ P D N D L+ ++ Y D
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQPEYCPD 264
Query: 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640
P + EV+ C +P RPS EL + + T I
Sbjct: 265 P------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 117/287 (40%), Gaps = 29/287 (10%)
Query: 362 FSNIIGSSPDSLVYKGTM--KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN 419
F+ +IG VY GT+ G +I + G + + + + +H N
Sbjct: 53 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-MKDFSHPN 111
Query: 420 TGKLLGYC--RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
LLG C E SP ++V Y +G L + E + + + +A+G+KY
Sbjct: 112 VLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKY 167
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN-PGTLGSQGAICILP 536
L ++ F +L + L E F+ K+ DF + + + + G++ + +
Sbjct: 168 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 537 -SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS--YVVD 593
SL+ + + ++++FGVLL E+++ P D N D L+ ++ Y D
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQPEYCPD 283
Query: 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640
P + EV+ C +P RPS EL + + T I
Sbjct: 284 P------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 318
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 76 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 134
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE---- 520
++ I +G++YL T+ + +L + + + + K+ DF K + E
Sbjct: 135 LQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 191
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
K P G P SL V ++++FGV+L E+ +
Sbjct: 192 KEP---GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 116
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE---- 520
++ I +G++YL T+ + +L + + + + K+ DF K + E
Sbjct: 117 LQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 173
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
K P G P SL V ++++FGV+L E+ +
Sbjct: 174 KEP---GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 117/287 (40%), Gaps = 29/287 (10%)
Query: 362 FSNIIGSSPDSLVYKGTM--KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN 419
F+ +IG VY GT+ G +I + G + + + + +H N
Sbjct: 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-MKDFSHPN 89
Query: 420 TGKLLGYC--RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
LLG C E SP ++V Y +G L + E + + + +A+G+KY
Sbjct: 90 VLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKY 145
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN-PGTLGSQGAICILP 536
L ++ F +L + L E F+ K+ DF + + + + G++ + +
Sbjct: 146 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 537 -SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS--YVVD 593
SL+ + + ++++FGVLL E+++ P D N D L+ ++ Y D
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQPEYCPD 261
Query: 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640
P + EV+ C +P RPS EL + + T I
Sbjct: 262 P------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 296
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 56 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 114
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE---- 520
++ I +G++YL T+ + +L + + + + K+ DF K + E
Sbjct: 115 LQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 171
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
K P G P SL V ++++FGV+L E+ +
Sbjct: 172 KEP---GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 62 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 120
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE---- 520
++ I +G++YL T+ + +L + + + + K+ DF K + E
Sbjct: 121 LQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 177
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
K P G P SL V ++++FGV+L E+ +
Sbjct: 178 KEP---GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 20/177 (11%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH-YG--------- 454
FQRE L + HE+ K G C + P ++VF+Y +G L + L +G
Sbjct: 64 FQREAELLTNLQHEHIVKFYGVCGDGDPL--IMVFEYMKHGDLNKFLRAHGPDAMILVDG 121
Query: 455 ----ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFD 510
+ ++ ++ + I IA G+ YL ++ F +L + + + K+ DF
Sbjct: 122 QPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFG 178
Query: 511 SWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ + + G + P S+ R + ++++FGV+L EI + G+ P
Sbjct: 179 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 65 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 123
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE---- 520
++ I +G++YL T+ + +L + + + + K+ DF K + E
Sbjct: 124 LQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 180
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
K P G P SL V ++++FGV+L E+ +
Sbjct: 181 KEP---GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 89 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 147
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE---- 520
++ I +G++YL T+ + +L + + + + K+ DF K + E
Sbjct: 148 LQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 204
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
K P G P SL V ++++FGV+L E+ +
Sbjct: 205 KEP---GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 64 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 122
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE---- 520
++ I +G++YL T+ + +L + + + + K+ DF K + E
Sbjct: 123 LQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 179
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
K P G P SL V ++++FGV+L E+ +
Sbjct: 180 KEP---GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 63 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 121
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE---- 520
++ I +G++YL T+ + +L + + + + K+ DF K + E
Sbjct: 122 LQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 178
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
K P G P SL V ++++FGV+L E+ +
Sbjct: 179 KEP---GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 116
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE---- 520
++ I +G++YL T+ + +L + + + + K+ DF K + E
Sbjct: 117 LQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKV 173
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
K P G P SL V ++++FGV+L E+ +
Sbjct: 174 KEP---GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 57 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 115
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE---- 520
++ I +G++YL T+ + +L + + + + K+ DF K + E
Sbjct: 116 LQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 172
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
K P G P SL V ++++FGV+L E+ +
Sbjct: 173 KEP---GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 116
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE---- 520
++ I +G++YL T+ + +L + + + + K+ DF K + E
Sbjct: 117 LQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 173
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
K P G P SL V ++++FGV+L E+ +
Sbjct: 174 KEP---GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 76 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 134
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE---- 520
++ I +G++YL T+ + +L + + + + K+ DF K + E
Sbjct: 135 LQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 191
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
K P G P SL V ++++FGV+L E+ +
Sbjct: 192 KEP---GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 119
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE---- 520
++ I +G++YL T+ + +L + + + + K+ DF K + E
Sbjct: 120 LQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
K P G P SL V ++++FGV+L E+ +
Sbjct: 177 KEP---GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 117/287 (40%), Gaps = 29/287 (10%)
Query: 362 FSNIIGSSPDSLVYKGTM--KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN 419
F+ +IG VY GT+ G +I + G + + + + +H N
Sbjct: 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-MKDFSHPN 151
Query: 420 TGKLLGYC--RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
LLG C E SP ++V Y +G L + E + + + +A+G+K+
Sbjct: 152 VLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKF 207
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS-EKNPGTLGSQGAICILP 536
L ++ F +L + L E F+ K+ DF + + + + G++ + +
Sbjct: 208 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 537 -SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS--YVVD 593
SL+ + + ++++FGVLL E+++ P D N D L+ ++ Y D
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQPEYCPD 323
Query: 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640
P + EV+ C +P RPS EL + + T I
Sbjct: 324 P------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 117/287 (40%), Gaps = 29/287 (10%)
Query: 362 FSNIIGSSPDSLVYKGTM--KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN 419
F+ +IG VY GT+ G +I + G + + + + +H N
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-MKDFSHPN 92
Query: 420 TGKLLGYC--RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
LLG C E SP ++V Y +G L + E + + + +A+G+K+
Sbjct: 93 VLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKF 148
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS-EKNPGTLGSQGAICILP 536
L ++ F +L + L E F+ K+ DF + + + + G++ + +
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 537 -SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS--YVVD 593
SL+ + + ++++FGVLL E+++ P D N D L+ ++ Y D
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQPEYCPD 264
Query: 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640
P + EV+ C +P RPS EL + + T I
Sbjct: 265 P------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ ++ G+L E+L + ++ +
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQ-KHKERIDHIKL 119
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE---- 520
++ I +G++YL T+ + +L + + + + K+ DF K + E
Sbjct: 120 LQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
K P G P SL V ++++FGV+L E+ +
Sbjct: 177 KEP---GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 117/287 (40%), Gaps = 29/287 (10%)
Query: 362 FSNIIGSSPDSLVYKGTM--KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN 419
F+ +IG VY GT+ G +I + G + + + + +H N
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-MKDFSHPN 92
Query: 420 TGKLLGYC--RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
LLG C E SP ++V Y +G L + E + + + +A+G+K+
Sbjct: 93 VLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKF 148
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS-EKNPGTLGSQGAICILP 536
L ++ F +L + L E F+ K+ DF + + + + G++ + +
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 537 -SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS--YVVD 593
SL+ + + ++++FGVLL E+++ P D N D L+ ++ Y D
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQPEYCPD 264
Query: 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640
P + EV+ C +P RPS EL + + T I
Sbjct: 265 P------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 33/299 (11%)
Query: 354 ELEVACED--FSNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQR 407
E EVA E S +G +VY+G KG PE V + E + + F
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLN 62
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQV-------- 459
E + + N + +LLG + P +++ + + G L +L R ++
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQP--TLVIMELMTRGDLKSYLR-SLRPEMENNPVLAP 119
Query: 460 -SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518
S ++ +++ IA G+ YL+ F +L + + EDF+ K+ DF + I
Sbjct: 120 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 176
Query: 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWA 578
G G + P SL+ ++++FGV+L EI L +
Sbjct: 177 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI-----------ATLAEQP 225
Query: 579 KDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637
L +V+ +V++ L + ++ E++ +C + RPS E+ + ++ ++
Sbjct: 226 YQGLSNEQVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEME 284
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 117/287 (40%), Gaps = 29/287 (10%)
Query: 362 FSNIIGSSPDSLVYKGTM--KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN 419
F+ +IG VY GT+ G +I + G + + + + +H N
Sbjct: 39 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-MKDFSHPN 97
Query: 420 TGKLLGYC--RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
LLG C E SP ++V Y +G L + E + + + +A+G+K+
Sbjct: 98 VLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKF 153
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS-EKNPGTLGSQGAICILP 536
L ++ F +L + L E F+ K+ DF + + + + G++ + +
Sbjct: 154 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 537 -SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS--YVVD 593
SL+ + + ++++FGVLL E+++ P D N D L+ ++ Y D
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQPEYCPD 269
Query: 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640
P + EV+ C +P RPS EL + + T I
Sbjct: 270 P------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 304
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 117/287 (40%), Gaps = 29/287 (10%)
Query: 362 FSNIIGSSPDSLVYKGTM--KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN 419
F+ +IG VY GT+ G +I + G + + + + +H N
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-MKDFSHPN 93
Query: 420 TGKLLGYC--RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
LLG C E SP ++V Y +G L + E + + + +A+G+K+
Sbjct: 94 VLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKF 149
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS-EKNPGTLGSQGAICILP 536
L ++ F +L + L E F+ K+ DF + + + + G++ + +
Sbjct: 150 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 537 -SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS--YVVD 593
SL+ + + ++++FGVLL E+++ P D N D L+ ++ Y D
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQPEYCPD 265
Query: 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640
P + EV+ C +P RPS EL + + T I
Sbjct: 266 P------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 300
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 33/299 (11%)
Query: 354 ELEVACED--FSNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQR 407
E EVA E S +G +VY+G KG PE V + E + + F
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLN 71
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQV-------- 459
E + + N + +LLG + P +++ + + G L +L R ++
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQP--TLVIMELMTRGDLKSYLR-SLRPEMENNPVLAP 128
Query: 460 -SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518
S ++ +++ IA G+ YL+ F +L + + EDF+ K+ DF + I
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 185
Query: 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWA 578
G G + P SL+ ++++FGV+L EI L +
Sbjct: 186 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI-----------ATLAEQP 234
Query: 579 KDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637
L +V+ +V++ L + ++ E++ +C + RPS E+ + ++ ++
Sbjct: 235 YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 293
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 117/287 (40%), Gaps = 29/287 (10%)
Query: 362 FSNIIGSSPDSLVYKGTM--KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN 419
F+ +IG VY GT+ G +I + G + + + + +H N
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-MKDFSHPN 90
Query: 420 TGKLLGYC--RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKY 477
LLG C E SP ++V Y +G L + E + + + +A+G+K+
Sbjct: 91 VLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKF 146
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS-EKNPGTLGSQGAICILP 536
L ++ F +L + L E F+ K+ DF + + + + G++ + +
Sbjct: 147 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 537 -SSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS--YVVD 593
SL+ + + ++++FGVLL E+++ P D N D L+ ++ Y D
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQPEYCPD 262
Query: 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640
P + EV+ C +P RPS EL + + T I
Sbjct: 263 P------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 297
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 108/254 (42%), Gaps = 28/254 (11%)
Query: 353 QELEVACEDFSNIIGSSPDSLVYKGTMKG---GPEIAVISLCIKEEHWTGYLELYFQREV 409
+E+ ++ F +G VYKG + G G + +++ ++ G L F+ E
Sbjct: 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 80
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL----HYGERCQVSWTRRM 465
AR+ H N LLG + P + ++F Y S+G L+E L + + R +
Sbjct: 81 MLRARLQHPNVVCLLGVVTKDQPLS--MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 138
Query: 466 K----------IVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515
K +V IA G++YL + +L + V + + + K+ D ++ +
Sbjct: 139 KSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREV 195
Query: 516 LARSEKNPGTLGSQ--GAICILPSSLEARHLDVQGNIYAFGVLLLEIISG--RPPCCKDK 571
A LG+ + P ++ + +I+++GV+L E+ S +P C
Sbjct: 196 YAADYYK--LLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN 253
Query: 572 GNLVDWAKDYLELP 585
++V+ ++ LP
Sbjct: 254 QDVVEMIRNRQVLP 267
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 108/254 (42%), Gaps = 28/254 (11%)
Query: 353 QELEVACEDFSNIIGSSPDSLVYKGTMKG---GPEIAVISLCIKEEHWTGYLELYFQREV 409
+E+ ++ F +G VYKG + G G + +++ ++ G L F+ E
Sbjct: 4 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 63
Query: 410 ADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL----HYGERCQVSWTRRM 465
AR+ H N LLG + P + ++F Y S+G L+E L + + R +
Sbjct: 64 MLRARLQHPNVVCLLGVVTKDQPLS--MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 121
Query: 466 K----------IVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515
K +V IA G++YL + +L + V + + + K+ D ++ +
Sbjct: 122 KSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREV 178
Query: 516 LARSEKNPGTLGSQ--GAICILPSSLEARHLDVQGNIYAFGVLLLEIISG--RPPCCKDK 571
A LG+ + P ++ + +I+++GV+L E+ S +P C
Sbjct: 179 YAADYYK--LLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN 236
Query: 572 GNLVDWAKDYLELP 585
++V+ ++ LP
Sbjct: 237 QDVVEMIRNRQVLP 250
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 119/298 (39%), Gaps = 31/298 (10%)
Query: 354 ELEVACED--FSNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQR 407
E EVA E S +G +VY+G KG PE V + E + + F
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLN 67
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQV-------- 459
E + + N + +LLG + P +++ + + G L +L
Sbjct: 68 EASVMKEFNCHHVVRLLGVVSQGQP--TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 125
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519
S ++ +++ IA G+ YL+ F +L + + EDF+ K+ DF + I
Sbjct: 126 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 182
Query: 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK 579
G G + P SL+ ++++FGV+L EI L +
Sbjct: 183 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI-----------ATLAEQPY 231
Query: 580 DYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637
L +V+ +V++ L + ++ E++ +C + RPS E+ + ++ ++
Sbjct: 232 QGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 289
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 23/216 (10%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLH----YGERCQVSWTRRMKIVIG 470
H N +L GY ++ TR+ L+ +YA GT+Y L + E+ ++ + +
Sbjct: 68 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 471 IARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQG 530
+ +H ++ P + L S+ +F + S +T L GTL
Sbjct: 125 YCHSKRVIHRDIKPENLL--LGSAGELKIANFGWSVHAPSSRRTTLC------GTLD--- 173
Query: 531 AICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
+ P +E R D + ++++ GVL E + G+PP
Sbjct: 174 --YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 90/219 (41%), Gaps = 17/219 (7%)
Query: 351 SRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVA 410
S+++ + D +G VY + I + + K + +E +REV
Sbjct: 5 SKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVE 64
Query: 411 DLARINHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
+ + H N +L GY ++ TR+ L+ +YA GT+Y L R R +
Sbjct: 65 IQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSRFDEQ--RTATYIT 119
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNP--GTLG 527
+A L Y H++ ++ + L + K+ DF W S ++ GTL
Sbjct: 120 ELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADF-GWSVHAPSSRRDTLCGTLD 175
Query: 528 SQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
+ P +E R D + ++++ GVL E + G PP
Sbjct: 176 -----YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 11/162 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F+RE+ L + H+N K G C + L+ +Y G+L ++L + ++ +
Sbjct: 59 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKL 117
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE---- 520
++ I +G++YL T+ + L + + + + K+ DF K + E
Sbjct: 118 LQYTSQICKGMEYLGTKR---YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKV 174
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
K P G P SL V ++++FGV+L E+ +
Sbjct: 175 KEP---GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 123/303 (40%), Gaps = 33/303 (10%)
Query: 350 FSRQELEVACED--FSNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLEL 403
F E EVA E S +G +VY+G KG PE V + E + +
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERI 64
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQV---- 459
F E + + N + +LLG + P +++ + + G L +L R ++
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQP--TLVIMELMTRGDLKSYLR-SLRPEMENNP 121
Query: 460 -----SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514
S ++ +++ IA G+ YL+ F +L + + EDF+ K+ DF +
Sbjct: 122 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 178
Query: 515 ILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL 574
I G G + P SL+ ++++FGV+L EI L
Sbjct: 179 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI-----------ATL 227
Query: 575 VDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634
+ L +V+ +V++ L + ++ E++ +C + RPS E+ + ++
Sbjct: 228 AEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 287
Query: 635 RID 637
++
Sbjct: 288 EME 290
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 23/216 (10%)
Query: 358 ACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI 415
A EDF +G VY K I + + K + +E +REV + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 416 NHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLH----YGERCQVSWTRRMKIVIG 470
H N +L GY ++ TR+ L+ +YA GT+Y L + E+ ++ + +
Sbjct: 69 RHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 471 IARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQG 530
+ +H ++ P + L S+ +F + S +T L GTL
Sbjct: 126 YCHSKRVIHRDIKPENLL--LGSAGELKIANFGWSVHAPSSRRTTLC------GTLD--- 174
Query: 531 AICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
+ P +E R D + ++++ GVL E + G+PP
Sbjct: 175 --YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 119/298 (39%), Gaps = 31/298 (10%)
Query: 354 ELEVACED--FSNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQR 407
E EVA E S +G +VY+G KG PE V + E + + F
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLN 77
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQV-------- 459
E + + N + +LLG + P +++ + + G L +L
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQP--TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 135
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519
S ++ +++ IA G+ YL+ F +L + + EDF+ K+ DF + I
Sbjct: 136 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
Query: 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK 579
G G + P SL+ ++++FGV+L EI L +
Sbjct: 193 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI-----------ATLAEQPY 241
Query: 580 DYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637
L +V+ +V++ L + ++ E++ +C + RPS E+ + ++ ++
Sbjct: 242 QGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 91/217 (41%), Gaps = 13/217 (5%)
Query: 351 SRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVA 410
S+++ + D +G VY + I + + K + +E +REV
Sbjct: 5 SKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVE 64
Query: 411 DLARINHENTGKLLGYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI 469
+ + H N +L GY ++ TR+ L+ +YA GT+Y L R R +
Sbjct: 65 IQSHLRHPNILRLYGYFHDA---TRVYLILEYAPLGTVYRELQKLSRFDEQ--RTATYIT 119
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQ 529
+A L Y H++ ++ + L + K+ DF W ++ A S + G+
Sbjct: 120 ELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADF-GW-SVHAPSSRRTTLCGTL 174
Query: 530 GAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
+ P +E R D + ++++ GVL E + G PP
Sbjct: 175 DYLP--PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 33/299 (11%)
Query: 354 ELEVACED--FSNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQR 407
E EVA E S +G +VY+G KG PE V + E + + F
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLN 64
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQV-------- 459
E + + N + +LLG + P +++ + + G L +L R ++
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQP--TLVIMELMTRGDLKSYLR-SLRPEMENNPVLAP 121
Query: 460 -SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518
S ++ +++ IA G+ YL+ F +L + + EDF+ K+ DF + I
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 178
Query: 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWA 578
G G + P SL+ ++++FGV+L EI L +
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI-----------ATLAEQP 227
Query: 579 KDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637
L +V+ +V++ L + ++ E++ +C + RPS E+ + ++ ++
Sbjct: 228 YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 286
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 81/198 (40%), Gaps = 27/198 (13%)
Query: 387 VISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGT 446
++++ + +E + ++ FQRE A +A ++ N KLLG C P L+F+Y + G
Sbjct: 79 MVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC--LLFEYMAYGD 136
Query: 447 LYE--------------HLHYGERCQV--------SWTRRMKIVIGIARGLKYLHTELGP 484
L E H R +V S ++ I +A G+ YL
Sbjct: 137 LNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER--- 193
Query: 485 PFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHL 544
F +L + + E+ K+ DF + I + + + P S+
Sbjct: 194 KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRY 253
Query: 545 DVQGNIYAFGVLLLEIIS 562
+ +++A+GV+L EI S
Sbjct: 254 TTESDVWAYGVVLWEIFS 271
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 33/299 (11%)
Query: 354 ELEVACED--FSNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQR 407
E EVA E S +G +VY+G KG PE V + E + + F
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLN 64
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQV-------- 459
E + + N + +LLG + P +++ + + G L +L R ++
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQP--TLVIMELMTRGDLKSYLR-SLRPEMENNPVLAP 121
Query: 460 -SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518
S ++ +++ IA G+ YL+ F +L + + EDF+ K+ DF + I
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYET 178
Query: 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWA 578
G G + P SL+ ++++FGV+L EI L +
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI-----------ATLAEQP 227
Query: 579 KDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637
L +V+ +V++ L + ++ E++ +C + RPS E+ + ++ ++
Sbjct: 228 YQGLSNEQVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEME 286
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL-HYGERCQVSWTRRM 465
+E+ L ++NH N K E + +V + A G L + H+ ++ ++ R +
Sbjct: 81 KEIDLLKQLNHPNVIKYYASFIEDNELN--IVLELADAGDLSRMIKHFKKQKRLIPERTV 138
Query: 466 -KIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
K + + L+++H+ ++ + V++T KL D + +++
Sbjct: 139 WKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS 195
Query: 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK----- 579
+G+ + P + + + +I++ G LL E+ + + P DK NL K
Sbjct: 196 LVGTPYYMS--PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC 253
Query: 580 DYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSM 625
DY LP H+S ++L+ ++VN+C+NPD KRP +
Sbjct: 254 DYPPLPS----------DHYS-EELR---QLVNMCINPDPEKRPDV 285
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 33/299 (11%)
Query: 354 ELEVACED--FSNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQR 407
E EVA E S +G +VY+G KG PE V + E + + F
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLN 71
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQV-------- 459
E + + N + +LLG + P +++ + + G L +L R ++
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQP--TLVIMELMTRGDLKSYLR-SLRPEMENNPVLAP 128
Query: 460 -SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518
S ++ +++ IA G+ YL+ F +L + + EDF+ K+ DF + I
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 185
Query: 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWA 578
G G + P SL+ ++++FGV+L EI L +
Sbjct: 186 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI-----------ATLAEQP 234
Query: 579 KDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637
L +V+ +V++ L + ++ E++ +C + RPS E+ + ++ ++
Sbjct: 235 YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 293
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 10/163 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPF---TRMLVFDYASNGTLYEHLHYGER----C 457
F E A + +H N +LLG C E S M++ + G L+ +L Y
Sbjct: 83 FLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPK 142
Query: 458 QVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517
+ +K ++ IA G++YL F +L + L +D + + DF K I +
Sbjct: 143 HIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYS 199
Query: 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEI 560
G + I SL R + +++AFGV + EI
Sbjct: 200 GDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 33/299 (11%)
Query: 354 ELEVACED--FSNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQR 407
E EVA E S +G +VY+G KG PE V + E + + F
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLN 99
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQV-------- 459
E + + N + +LLG + P +++ + + G L +L R ++
Sbjct: 100 EASVMKEFNCHHVVRLLGVVSQGQP--TLVIMELMTRGDLKSYLR-SLRPEMENNPVLAP 156
Query: 460 -SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518
S ++ +++ IA G+ YL+ F +L + + EDF+ K+ DF + I
Sbjct: 157 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 213
Query: 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWA 578
G G + P SL+ ++++FGV+L EI L +
Sbjct: 214 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI-----------ATLAEQP 262
Query: 579 KDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637
L +V+ +V++ L + ++ E++ +C + RPS E+ + ++ ++
Sbjct: 263 YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 321
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 33/299 (11%)
Query: 354 ELEVACED--FSNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQR 407
E EVA E S +G +VY+G KG PE V + E + + F
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLN 70
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQV-------- 459
E + + N + +LLG + P +++ + + G L +L R ++
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQP--TLVIMELMTRGDLKSYLR-SLRPEMENNPVLAP 127
Query: 460 -SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518
S ++ +++ IA G+ YL+ F +L + + EDF+ K+ DF + I
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 184
Query: 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWA 578
G G + P SL+ ++++FGV+L EI L +
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI-----------ATLAEQP 233
Query: 579 KDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637
L +V+ +V++ L + ++ E++ +C + RPS E+ + ++ ++
Sbjct: 234 YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 292
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 33/299 (11%)
Query: 354 ELEVACED--FSNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQR 407
E EVA E S +G +VY+G KG PE V + E + + F
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLN 70
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQV-------- 459
E + + N + +LLG + P +++ + + G L +L R ++
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQP--TLVIMELMTRGDLKSYLR-SLRPEMENNPVLAP 127
Query: 460 -SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518
S ++ +++ IA G+ YL+ F +L + + EDF+ K+ DF + I
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 184
Query: 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWA 578
G G + P SL+ ++++FGV+L EI L +
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI-----------ATLAEQP 233
Query: 579 KDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637
L +V+ +V++ L + ++ E++ +C + RPS E+ + ++ ++
Sbjct: 234 YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 292
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 33/299 (11%)
Query: 354 ELEVACED--FSNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQR 407
E EVA E S +G +VY+G KG PE V + E + + F
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLN 77
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQV-------- 459
E + + N + +LLG + P +++ + + G L +L R ++
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQP--TLVIMELMTRGDLKSYLR-SLRPEMENNPVLAP 134
Query: 460 -SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518
S ++ +++ IA G+ YL+ F +L + + EDF+ K+ DF + I
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 191
Query: 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWA 578
G G + P SL+ ++++FGV+L EI L +
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI-----------ATLAEQP 240
Query: 579 KDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637
L +V+ +V++ L + ++ E++ +C + RPS E+ + ++ ++
Sbjct: 241 YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 382 GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441
G ++AV SL K E ++ ++E+ L + HEN K G C E L+ ++
Sbjct: 50 GEQVAVKSL--KPESGGNHI-ADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEF 106
Query: 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED 501
+G+L E+L + +++ +++K + I +G+ YL + + +L + V + +
Sbjct: 107 LPSGSLKEYLPKNKN-KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESE 162
Query: 502 FSPKLVDFDSWKTILARSEKNPGTLGSQGAICIL---PSSLEARHLDVQGNIYAFGVLLL 558
K+ DF K I ++K T+ + P L + ++++FGV L
Sbjct: 163 HQVKIGDFGLTKAI--ETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLH 220
Query: 559 EIIS 562
E+++
Sbjct: 221 ELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 382 GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441
G ++AV SL K E ++ ++E+ L + HEN K G C E L+ ++
Sbjct: 38 GEQVAVKSL--KPESGGNHIA-DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEF 94
Query: 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED 501
+G+L E+L + +++ +++K + I +G+ YL + + +L + V + +
Sbjct: 95 LPSGSLKEYLPKNKN-KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESE 150
Query: 502 FSPKLVDFDSWKTILARSEKNPGTLGSQGAICIL---PSSLEARHLDVQGNIYAFGVLLL 558
K+ DF K I ++K T+ + P L + ++++FGV L
Sbjct: 151 HQVKIGDFGLTKAI--ETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLH 208
Query: 559 EIIS 562
E+++
Sbjct: 209 ELLT 212
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 90/221 (40%), Gaps = 35/221 (15%)
Query: 365 IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLL 424
+IG VYKG++ P + +K + ++ + + + H+N + +
Sbjct: 20 LIGRGRYGAVYKGSLDERP------VAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFI 73
Query: 425 GYCRESSPFTRM---LVFDYASNGTL--YEHLHYGERCQVSWTRRMKIVIGIARGLKYLH 479
+ RM LV +Y NG+L Y LH + W ++ + RGL YLH
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD-----WVSSCRLAHSVTRGLAYLH 128
Query: 480 TEL------GPPFTISELNSSAVYLTEDFSPKLVDFD-----SWKTILARSEKNPGTLGS 528
TEL P + +LNS V + D + + DF + ++ E++ +
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 529 QGAIC-----ILPSSLEARHLDV---QGNIYAFGVLLLEII 561
G I +L ++ R + Q ++YA G++ EI
Sbjct: 189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 73/176 (41%), Gaps = 19/176 (10%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH-YGERCQ----- 458
FQRE L + H++ + G C E P ++VF+Y +G L L +G +
Sbjct: 67 FQREAELLTMLQHQHIVRFFGVCTEGRPL--LMVFEYMRHGDLNRFLRSHGPDAKLLAGG 124
Query: 459 -------VSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDS 511
+ + + + +A G+ YL G F +L + + + K+ DF
Sbjct: 125 EDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGM 181
Query: 512 WKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ I + G + P S+ R + ++++FGV+L EI + G+ P
Sbjct: 182 SRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 73/176 (41%), Gaps = 19/176 (10%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH-YGERCQ----- 458
FQRE L + H++ + G C E P ++VF+Y +G L L +G +
Sbjct: 61 FQREAELLTMLQHQHIVRFFGVCTEGRPL--LMVFEYMRHGDLNRFLRSHGPDAKLLAGG 118
Query: 459 -------VSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDS 511
+ + + + +A G+ YL G F +L + + + K+ DF
Sbjct: 119 EDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGM 175
Query: 512 WKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ I + G + P S+ R + ++++FGV+L EI + G+ P
Sbjct: 176 SRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 73/176 (41%), Gaps = 19/176 (10%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH-YGERCQ----- 458
FQRE L + H++ + G C E P ++VF+Y +G L L +G +
Sbjct: 90 FQREAELLTMLQHQHIVRFFGVCTEGRPL--LMVFEYMRHGDLNRFLRSHGPDAKLLAGG 147
Query: 459 -------VSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDS 511
+ + + + +A G+ YL G F +L + + + K+ DF
Sbjct: 148 EDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGM 204
Query: 512 WKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ I + G + P S+ R + ++++FGV+L EI + G+ P
Sbjct: 205 SRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 99/217 (45%), Gaps = 38/217 (17%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IG V++G +G E+AV +EE + + E+ + HEN +LG
Sbjct: 11 IGKGRFGEVWRGKWRG-EEVAVKIFSSREER-----SWFREAEIYQTVMLRHEN---ILG 61
Query: 426 YC----RESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+ +++ +T++ LV DY +G+L+++L+ R V+ +K+ + A GL +LH
Sbjct: 62 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHM 118
Query: 481 EL-----GPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTL--------G 527
E+ P +L S + + ++ + + D + R + T+ G
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVG 174
Query: 528 SQGAIC--ILPSSLEARHLDV--QGNIYAFGVLLLEI 560
++ + +L S+ +H + + +IYA G++ EI
Sbjct: 175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 99/217 (45%), Gaps = 38/217 (17%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IG V++G +G E+AV +EE + + E+ + HEN +LG
Sbjct: 14 IGKGRFGEVWRGKWRG-EEVAVKIFSSREER-----SWFREAEIYQTVMLRHEN---ILG 64
Query: 426 YC----RESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+ +++ +T++ LV DY +G+L+++L+ R V+ +K+ + A GL +LH
Sbjct: 65 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHM 121
Query: 481 EL-----GPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTL--------G 527
E+ P +L S + + ++ + + D + R + T+ G
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVG 177
Query: 528 SQGAIC--ILPSSLEARHLDV--QGNIYAFGVLLLEI 560
++ + +L S+ +H + + +IYA G++ EI
Sbjct: 178 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 21/198 (10%)
Query: 376 KGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435
K T + E+ V+ I+ + T + F +EV + + H N K +G +
Sbjct: 28 KVTHRETGEVMVMKELIRFDEET---QRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLN- 83
Query: 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495
+ +Y GTL + + Q W++R+ IA G+ YLH+ +LNS
Sbjct: 84 -FITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHN 138
Query: 496 VYLTEDFSPKLVDFDSWKTILA--------RSEKNPGTLGSQGAI----CILPSSLEARH 543
+ E+ + + DF + ++ RS K P + + P + R
Sbjct: 139 CLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRS 198
Query: 544 LDVQGNIYAFGVLLLEII 561
D + ++++FG++L EII
Sbjct: 199 YDEKVDVFSFGIVLCEII 216
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 99/217 (45%), Gaps = 38/217 (17%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IG V++G +G E+AV +EE + + E+ + HEN +LG
Sbjct: 17 IGKGRFGEVWRGKWRG-EEVAVKIFSSREER-----SWFREAEIYQTVMLRHEN---ILG 67
Query: 426 YC----RESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+ +++ +T++ LV DY +G+L+++L+ R V+ +K+ + A GL +LH
Sbjct: 68 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHM 124
Query: 481 EL-----GPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTL--------G 527
E+ P +L S + + ++ + + D + R + T+ G
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVG 180
Query: 528 SQGAIC--ILPSSLEARHLDV--QGNIYAFGVLLLEI 560
++ + +L S+ +H + + +IYA G++ EI
Sbjct: 181 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 99/217 (45%), Gaps = 38/217 (17%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IG V++G +G E+AV +EE + + E+ + HEN +LG
Sbjct: 12 IGKGRFGEVWRGKWRG-EEVAVKIFSSREER-----SWFREAEIYQTVMLRHEN---ILG 62
Query: 426 YC----RESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+ +++ +T++ LV DY +G+L+++L+ R V+ +K+ + A GL +LH
Sbjct: 63 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHM 119
Query: 481 EL-----GPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTL--------G 527
E+ P +L S + + ++ + + D + R + T+ G
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVG 175
Query: 528 SQGAIC--ILPSSLEARHLDV--QGNIYAFGVLLLEI 560
++ + +L S+ +H + + +IYA G++ EI
Sbjct: 176 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 99/217 (45%), Gaps = 38/217 (17%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IG V++G +G E+AV +EE + + E+ + HEN +LG
Sbjct: 37 IGKGRFGEVWRGKWRG-EEVAVKIFSSREER-----SWFREAEIYQTVMLRHEN---ILG 87
Query: 426 YC----RESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+ +++ +T++ LV DY +G+L+++L+ R V+ +K+ + A GL +LH
Sbjct: 88 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHM 144
Query: 481 EL-----GPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTL--------G 527
E+ P +L S + + ++ + + D + R + T+ G
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVG 200
Query: 528 SQGAIC--ILPSSLEARHLDV--QGNIYAFGVLLLEI 560
++ + +L S+ +H + + +IYA G++ EI
Sbjct: 201 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 99/217 (45%), Gaps = 38/217 (17%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IG V++G +G E+AV +EE + + E+ + HEN +LG
Sbjct: 50 IGKGRFGEVWRGKWRG-EEVAVKIFSSREER-----SWFREAEIYQTVMLRHEN---ILG 100
Query: 426 YC----RESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
+ +++ +T++ LV DY +G+L+++L+ R V+ +K+ + A GL +LH
Sbjct: 101 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHM 157
Query: 481 EL-----GPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTL--------G 527
E+ P +L S + + ++ + + D + R + T+ G
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVG 213
Query: 528 SQGAIC--ILPSSLEARHLDV--QGNIYAFGVLLLEI 560
++ + +L S+ +H + + +IYA G++ EI
Sbjct: 214 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH----YGERCQV 459
Y RE ++R++H KL ++ L YA NG L +++ + E C
Sbjct: 78 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTR 135
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519
+T I L+YLH G +L + L ED ++ DF + K + S
Sbjct: 136 FYTAE------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
++ A + P L + +++A G ++ ++++G PP
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 19/169 (11%)
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVF--DYASNGTLYEHLH----YGERC 457
Y RE ++R++H KL +C + L F YA NG L +++ + E C
Sbjct: 83 YVTRERDVMSRLDHPFFVKLY-FCFQDD---EKLYFGLSYAKNGELLKYIRKIGSFDETC 138
Query: 458 QVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517
+T I L+YLH G +L + L ED ++ DF + K +
Sbjct: 139 TRFYTAE------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 189
Query: 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
S++ A + P L + +++A G ++ ++++G PP
Sbjct: 190 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 116/271 (42%), Gaps = 29/271 (10%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
+GS +V G KG ++AV IKE + E F +E + +++H K G
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVK--MIKEGSMS---EDEFFQEAQTMMKLSHPKLVKFYG 70
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLH-YGERCQVSWTRRMKIVIGIARGLKYLHTELGP 484
C + P +V +Y SNG L +L +G+ + S + +++ + G+ +L +
Sbjct: 71 VCSKEYPI--YIVTEYISNGCLLNYLRSHGKGLEPS--QLLEMCYDVCEGMAFLESH--- 123
Query: 485 PFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAI-CILPSSLEARH 543
F +L + + D K+ DF + +L ++ ++G++ + P
Sbjct: 124 QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVL--DDQYVSSVGTKFPVKWSAPEVFHYFK 181
Query: 544 LDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYD 602
+ +++AFG+L+ E+ S G+ P D EV+ V + +
Sbjct: 182 YSSKSDVWAFGILMWEVFSLGKMP------------YDLYTNSEVVLKVSQGHRLYRPHL 229
Query: 603 DLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
I +++ C + KRP+ Q+L + +E
Sbjct: 230 ASDTIYQIMYSCWHELPEKRPTFQQLLSSIE 260
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 102/251 (40%), Gaps = 45/251 (17%)
Query: 406 QREVADLARINHENTGKLLGYCRESSPFT--RMLVFDYASNGTLYEHLHYGERCQVSWTR 463
+RE+ + HEN + + + S L+ + G+L ++L ++W
Sbjct: 57 EREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGN---IITWNE 113
Query: 464 RMKIVIGIARGLKYLHTEL--------GPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515
+ ++RGL YLH ++ P + S V L D + L DF +
Sbjct: 114 LCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADF----GL 169
Query: 516 LARSE--KNPG-TLGSQGAICIL-PSSLEA-----RHLDVQGNIYAFGVLLLEIISGRPP 566
R E K PG T G G + P LE R ++ ++YA G++L E++S
Sbjct: 170 AVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSR--- 226
Query: 567 CCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDIT----KR 622
CK VD E M + +H S ++L+ + VV+ + P I K
Sbjct: 227 -CKAADGPVD---------EYMLPFEEEIGQHPSLEELQEV--VVHKKMRPTIKDHWLKH 274
Query: 623 PSMQELCTMLE 633
P + +LC +E
Sbjct: 275 PGLAQLCVTIE 285
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 25/105 (23%)
Query: 126 GTNQLTGPIPPEIGNLT------------------------GLVKINLQSNGLTGRLPAE 161
G N L GPIPP I LT LV ++ N L+G LP
Sbjct: 85 GINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPS 144
Query: 162 LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206
+ +L +L + D NR+ GA+P S ++ M S LTG
Sbjct: 145 ISSLPNLVGITFDGNRISGAIPDSYGS-FSKLFTSMTISRNRLTG 188
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 62/145 (42%), Gaps = 22/145 (15%)
Query: 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSN 187
N+LTG IPP NL L ++L N L G G+ + +++HL +N L A G
Sbjct: 184 NRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSL--AFDLGK- 239
Query: 188 SGYTANIHGMYASSANL-----TGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGN 242
G + N++G+ + + GL L L + S+N G IP QG
Sbjct: 240 VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-----------QGG 288
Query: 243 CLQNKDPKQRATT--LCGGAPPART 265
LQ D A LCG PA T
Sbjct: 289 NLQRFDVSAYANNKCLCGSPLPACT 313
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 11/101 (10%)
Query: 158 LPAELGNLISLEELHLDR-NRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLS 211
+P+ L NL L L++ N L G +P +H +Y + N++G L +
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAI--AKLTQLHYLYITHTNVSGAIPDFLSQIK 125
Query: 212 QLKVADFSYNFFVGSIPKCLEYLPS---TSFQGNCLQNKDP 249
L DFSYN G++P + LP+ +F GN + P
Sbjct: 126 TLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 100/244 (40%), Gaps = 36/244 (14%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTR----MLVFDYASNGTLYEHL---HYGER- 456
F RE A + +H + KL+G S R M++ + +G L+ L GE
Sbjct: 72 FLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENP 131
Query: 457 CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516
+ ++ ++ IA G++YL + F +L + L ED + + DF + I
Sbjct: 132 FNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIY 188
Query: 517 ARSEKNPGTLGSQGAICILP------SSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCK 569
+ G QG LP SL V +++AFGV + EI++ G+ P
Sbjct: 189 S------GDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAG 242
Query: 570 DKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELC 629
+E E+ +Y++ + ++ + +++ C + D +RPS L
Sbjct: 243 ------------IENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLR 290
Query: 630 TMLE 633
LE
Sbjct: 291 MELE 294
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 20/166 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMK 466
REV L +++H N KL +SS F +V + + G L++ + +R + S +
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSF--YIVGELYTGGELFDEI--IKRKRFSEHDAAR 125
Query: 467 IVIGIARGLKYLHT------ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
I+ + G+ Y+H +L P + E +D K++DF T ++
Sbjct: 126 IIKQVFSGITYMHKHNIVHRDLKPENILLESKE------KDCDIKIIDF-GLSTCFQQNT 178
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
K +G+ A I P L + D + ++++ GV+L ++SG PP
Sbjct: 179 KMKDRIGT--AYYIAPEVLRGTY-DEKCDVWSAGVILYILLSGTPP 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 20/166 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMK 466
REV L +++H N KL +SS F +V + + G L++ + +R + S +
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSF--YIVGELYTGGELFDEI--IKRKRFSEHDAAR 125
Query: 467 IVIGIARGLKYLHT------ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
I+ + G+ Y+H +L P + E +D K++DF T ++
Sbjct: 126 IIKQVFSGITYMHKHNIVHRDLKPENILLESKE------KDCDIKIIDF-GLSTCFQQNT 178
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
K +G+ A I P L + D + ++++ GV+L ++SG PP
Sbjct: 179 KMKDRIGT--AYYIAPEVLRGTY-DEKCDVWSAGVILYILLSGTPP 221
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 78/183 (42%), Gaps = 18/183 (9%)
Query: 403 LYFQREVADLARINHENTGKLLGYCRESSPFTRM--LVFDYASNGTLYEHLHYGERCQVS 460
L F+RE + A +NH + +P + +V +Y TL + +H ++
Sbjct: 57 LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMT 114
Query: 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
R ++++ + L + H ++ + + ++ + K++DF +AR+
Sbjct: 115 PKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFG-----IARAI 166
Query: 521 KNPGTLGSQGAICI------LPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL 574
+ G +Q A I P +D + ++Y+ G +L E+++G PP D +
Sbjct: 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDS 226
Query: 575 VDW 577
V +
Sbjct: 227 VAY 229
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH----YGERCQV 459
Y RE ++R++H KL ++ L YA NG L +++ + E C
Sbjct: 75 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTR 132
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519
+T I L+YLH G +L + L ED ++ DF + K + S
Sbjct: 133 FYTAE------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 183
Query: 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
++ A + P L + +++A G ++ ++++G PP
Sbjct: 184 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 345 KDVVRFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELY 404
KDV R+ L++ +G+ V+ GT G ++A+ +L +LE
Sbjct: 1 KDVWEIPRESLQLIKR-----LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLE-- 53
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
E + ++ H+ +L E + +V +Y + G+L + L GE +
Sbjct: 54 ---EAQIMKKLKHDKLVQLYAVVSEEPIY---IVTEYMNKGSLLDFLKDGEGRALKLPNL 107
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + +A G+ Y+ + +L S+ + + K+ DF LAR ++
Sbjct: 108 VDMAAQVAAGMAYIERM---NYIHRDLRSANILVGNGLICKIADFG-----LARLIEDNE 159
Query: 525 TLGSQGAICIL----PSSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
QGA + P + ++ ++++FG+LL E+++ GR P
Sbjct: 160 XTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 206
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 79/193 (40%), Gaps = 11/193 (5%)
Query: 374 VYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433
VY K I + + K + +E +RE+ A ++H N +L Y +
Sbjct: 39 VYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRI 98
Query: 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493
L+ +YA G LY+ L + C R I+ +A L Y H G ++
Sbjct: 99 --YLILEYAPRGELYKELQ--KSCTFDEQRTATIMEELADALMYCH---GKKVIHRDIKP 151
Query: 494 SAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAF 553
+ L K+ DF W ++ A S + G+ + P +E R + + +++
Sbjct: 152 ENLLLGLKGELKIADF-GW-SVHAPSLRRKTMCGTLDYLP--PEMIEGRMHNEKVDLWCI 207
Query: 554 GVLLLEIISGRPP 566
GVL E++ G PP
Sbjct: 208 GVLCYELLVGNPP 220
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH----YGERCQV 459
Y RE ++R++H KL ++ L YA NG L +++ + E C
Sbjct: 60 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTR 117
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519
+T I L+YLH G +L + L ED ++ DF + K + S
Sbjct: 118 FYTAE------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 168
Query: 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
++ A + P L + +++A G ++ ++++G PP
Sbjct: 169 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 20/166 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMK 466
REV L +++H N KL +SS F +V + + G L++ + +R + S +
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSF--YIVGELYTGGELFDEII--KRKRFSEHDAAR 125
Query: 467 IVIGIARGLKYLHT------ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
I+ + G+ Y+H +L P + E +D K++DF T ++
Sbjct: 126 IIKQVFSGITYMHKHNIVHRDLKPENILLESKE------KDCDIKIIDF-GLSTCFQQNT 178
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
K +G+ A I P L + D + ++++ GV+L ++SG PP
Sbjct: 179 KMKDRIGT--AYYIAPEVLRGTY-DEKCDVWSAGVILYILLSGTPP 221
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH----YGERCQV 459
Y RE ++R++H KL ++ L YA NG L +++ + E C
Sbjct: 78 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTR 135
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519
+T I L+YLH G +L + L ED ++ DF + K + S
Sbjct: 136 FYTAE------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
++ A + P L + +++A G ++ ++++G PP
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH----YGERCQV 459
Y RE ++R++H KL ++ L YA NG L +++ + E C
Sbjct: 78 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTR 135
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519
+T I L+YLH G +L + L ED ++ DF + K + S
Sbjct: 136 FYTAE------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
++ A + P L + +++A G ++ ++++G PP
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH----YGERCQV 459
Y RE ++R++H KL ++ L YA NG L +++ + E C
Sbjct: 81 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTR 138
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519
+T I L+YLH G +L + L ED ++ DF + K + S
Sbjct: 139 FYTAE------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 189
Query: 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
++ A + P L + +++A G ++ ++++G PP
Sbjct: 190 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH----YGERCQV 459
Y RE ++R++H KL ++ L YA NG L +++ + E C
Sbjct: 76 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTR 133
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519
+T I L+YLH G +L + L ED ++ DF + K + S
Sbjct: 134 FYTAE------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
++ A + P L + +++A G ++ ++++G PP
Sbjct: 185 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 7/159 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
+QRE+ L + HE+ K G C + + LV +Y G+L ++L R V +
Sbjct: 58 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQL 114
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE-KNP 523
+ I G+ YLH + + L + V L D K+ DF K + E
Sbjct: 115 LLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 171
Query: 524 GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G P L+ ++++FGV L E+++
Sbjct: 172 REDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH----YGERCQV 459
Y RE ++R++H KL ++ L YA NG L +++ + E C
Sbjct: 76 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTR 133
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519
+T I L+YLH G +L + L ED ++ DF + K + S
Sbjct: 134 FYTAE------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
++ A + P L + +++A G ++ ++++G PP
Sbjct: 185 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH----YGERCQV 459
Y RE ++R++H KL ++ L YA NG L +++ + E C
Sbjct: 79 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTR 136
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519
+T I L+YLH G +L + L ED ++ DF + K + S
Sbjct: 137 FYTAE------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 187
Query: 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
++ A + P L + +++A G ++ ++++G PP
Sbjct: 188 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH----YGERCQV 459
Y RE ++R++H KL ++ L YA NG L +++ + E C
Sbjct: 78 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTR 135
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519
+T I L+YLH G +L + L ED ++ DF + K + S
Sbjct: 136 FYTAE------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
++ A + P L + +++A G ++ ++++G PP
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 7/159 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
+QRE+ L + HE+ K G C + + LV +Y G+L ++L R V +
Sbjct: 57 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQL 113
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE-KNP 523
+ I G+ YLH + + L + V L D K+ DF K + E
Sbjct: 114 LLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 170
Query: 524 GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G P L+ ++++FGV L E+++
Sbjct: 171 REDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH----YGERCQV 459
Y RE ++R++H KL ++ L YA NG L +++ + E C
Sbjct: 78 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTR 135
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519
+T I L+YLH G +L + L ED ++ DF + K + S
Sbjct: 136 FYTAE------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
++ A + P L + +++A G ++ ++++G PP
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH----YGERCQV 459
Y RE ++R++H KL ++ L YA NG L +++ + E C
Sbjct: 76 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTR 133
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519
+T I L+YLH G +L + L ED ++ DF + K + S
Sbjct: 134 FYTAE------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
++ A + P L + +++A G ++ ++++G PP
Sbjct: 185 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH----YGERCQV 459
Y RE ++R++H KL ++ L YA NG L +++ + E C
Sbjct: 53 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTR 110
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519
+T I L+YLH G +L + L ED ++ DF + K + S
Sbjct: 111 FYTAE------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 161
Query: 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
++ A + P L + +++A G ++ ++++G PP
Sbjct: 162 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH----YGERCQV 459
Y RE ++R++H KL ++ L YA NG L +++ + E C
Sbjct: 76 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTR 133
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519
+T I L+YLH G +L + L ED ++ DF + K + S
Sbjct: 134 FYTAE------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
++ A + P L + +++A G ++ ++++G PP
Sbjct: 185 KQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH----YGERCQV 459
Y RE ++R++H KL ++ L YA NG L +++ + E C
Sbjct: 54 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTR 111
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519
+T I L+YLH G +L + L ED ++ DF + K + S
Sbjct: 112 FYTAE------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 162
Query: 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
++ A + P L + +++A G ++ ++++G PP
Sbjct: 163 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 103/242 (42%), Gaps = 32/242 (13%)
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKI 467
EVA L ++H N KL + + + LV + G L++ + + R + + I
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNY--YLVMECYKGGELFDEIIH--RMKFNEVDAAVI 141
Query: 468 VIGIARGLKYLHT------ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521
+ + G+ YLH +L P + E + K+VDF + +K
Sbjct: 142 IKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALI------KIVDF-GLSAVFENQKK 194
Query: 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDY 581
LG+ A I P L ++ D + ++++ GV+L +++G PP G D ++
Sbjct: 195 MKERLGT--AYYIAPEVLRKKY-DEKCDVWSIGVILFILLAGYPPF----GGQTD--QEI 245
Query: 582 LELPEVMSYVVD-PELKHFSYDDLKVICEVVNLCVNPDIT-----KRPSMQELCTMLEGR 635
L E Y D PE K+ S +I +++ I+ + P ++E+C+ E
Sbjct: 246 LRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESG 305
Query: 636 ID 637
I+
Sbjct: 306 IE 307
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 120/305 (39%), Gaps = 31/305 (10%)
Query: 350 FSRQELEVACEDFSNI--IGSSPDSLVYKGT----MKGGPEIAVISLCIKEEHWTGYLEL 403
F E EV+ E + + +G +VY+G +KG E V + E + +
Sbjct: 4 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERI 62
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-------- 455
F E + + + +LLG + P ++V + ++G L +L
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQP--TLVVMELMAHGDLKSYLRSLRPEAENNPG 120
Query: 456 RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515
R + +++ IA G+ YL+ + F +L + + DF+ K+ DF + I
Sbjct: 121 RPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 177
Query: 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV 575
G G + P SL+ ++++FGV+L EI S L
Sbjct: 178 XETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-----------LA 226
Query: 576 DWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635
+ L +V+ +V+D + + + +++ +C + RP+ E+ +L+
Sbjct: 227 EQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 286
Query: 636 IDTSI 640
+ S
Sbjct: 287 LHPSF 291
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 120/305 (39%), Gaps = 31/305 (10%)
Query: 350 FSRQELEVACEDFSNI--IGSSPDSLVYKGT----MKGGPEIAVISLCIKEEHWTGYLEL 403
F E EV+ E + + +G +VY+G +KG E V + E + +
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERI 65
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-------- 455
F E + + + +LLG + P ++V + ++G L +L
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQP--TLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 456 RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515
R + +++ IA G+ YL+ + F +L + + DF+ K+ DF + I
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV 575
G G + P SL+ ++++FGV+L EI S L
Sbjct: 181 XETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-----------LA 229
Query: 576 DWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635
+ L +V+ +V+D + + + +++ +C + RP+ E+ +L+
Sbjct: 230 EQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
Query: 636 IDTSI 640
+ S
Sbjct: 290 LHPSF 294
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH----YGERCQV 459
Y RE ++R++H KL ++ L YA NG L +++ + E C
Sbjct: 56 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTR 113
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519
+T I L+YLH G +L + L ED ++ DF + K + S
Sbjct: 114 FYTAE------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 164
Query: 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
++ A + P L + +++A G ++ ++++G PP
Sbjct: 165 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH----YGERCQV 459
Y RE ++R++H KL ++ L YA NG L +++ + E C
Sbjct: 55 YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGSFDETCTR 112
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519
+T I L+YLH G +L + L ED ++ DF + K + S
Sbjct: 113 FYTAE------IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 163
Query: 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
++ A + P L + +++A G ++ ++++G PP
Sbjct: 164 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 100/239 (41%), Gaps = 34/239 (14%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F RE + +NH N L+G +L+ Y +G L + + +R + T +
Sbjct: 69 FLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQR---NPTVK 124
Query: 465 MKIVIG--IARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522
I G +ARG++YL + F +L + L E F+ K+ DF + IL R +
Sbjct: 125 DLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS 181
Query: 523 PGTLGSQGAICILP------SSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCK-DKGNL 574
Q LP SL+ + ++++FGVLL E+++ G PP D +L
Sbjct: 182 ----VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDL 237
Query: 575 VDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+ LP+ PE + D L +V+ C D RP+ + L +E
Sbjct: 238 THFLAQGRRLPQ-------PE---YCPDSL---YQVMQQCWEADPAVRPTFRVLVGEVE 283
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
F +G+ +V G +G ++A+ IKE + E F E + ++HE
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYDVAI--KMIKEGSMS---EDEFIEEAKVMMNLSHEKLV 82
Query: 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE 481
+L G C + P ++ +Y +NG L +L R + + +++ + ++YL ++
Sbjct: 83 QLYGVCTKQRPI--FIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK 139
Query: 482 LGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSS-LE 540
F +L + + + K+ DF + +L E + ++GS+ + P L
Sbjct: 140 ---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETS--SVGSKFPVRWSPPEVLM 194
Query: 541 ARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ +I+AFGVL+ EI S G+ P
Sbjct: 195 YSKFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 7/159 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
+++E+ L + HE+ K G C ++ + LV +Y G+L ++L R + +
Sbjct: 80 WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHSIGLAQL 136
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK-NP 523
+ I G+ YLH + + +L + V L D K+ DF K + E
Sbjct: 137 LLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRV 193
Query: 524 GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G P L+ ++++FGV L E+++
Sbjct: 194 REDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 403 LYFQREVADLARINHENTGKLLGYCRESSPFTRM--LVFDYASNGTLYEHLHYGERCQVS 460
L F+RE + A +NH + +P + +V +Y TL + +H ++
Sbjct: 57 LRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMT 114
Query: 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
R ++++ + L + H ++ + + ++ + K++DF +AR+
Sbjct: 115 PKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFG-----IARAI 166
Query: 521 KNPGTLGSQGAICI------LPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKD 570
+ G +Q A I P +D + ++Y+ G +L E+++G PP D
Sbjct: 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 403 LYFQREVADLARINHENTGKLLGYCRESSPFTRM--LVFDYASNGTLYEHLHYGERCQVS 460
L F+RE + A +NH + +P + +V +Y TL + +H ++
Sbjct: 57 LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMT 114
Query: 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
R ++++ + L + H ++ + + ++ + K+VDF +AR+
Sbjct: 115 PKRAIEVIADACQALNFSHQN---GIIHRDVKPANILISATNAVKVVDFG-----IARAI 166
Query: 521 KNPGTLGSQGAICI------LPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKD 570
+ G Q A I P +D + ++Y+ G +L E+++G PP D
Sbjct: 167 ADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 121/305 (39%), Gaps = 31/305 (10%)
Query: 350 FSRQELEVACEDFSNI--IGSSPDSLVYKGT----MKGGPEIAVISLCIKEEHWTGYLEL 403
F E EV+ E + + +G +VY+G +KG E V + E + +
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERI 65
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-------- 455
F E + + + +LLG + P ++V + ++G L +L
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQP--TLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 456 RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515
R + +++ IA G+ YL+ + F +L + + DF+ K+ DF + I
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV 575
+ G G + P SL+ ++++FGV+L EI S L
Sbjct: 181 YETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-----------LA 229
Query: 576 DWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635
+ L +V+ +V+D + + + +++ +C + RP+ E+ +L+
Sbjct: 230 EQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
Query: 636 IDTSI 640
+ S
Sbjct: 290 LHPSF 294
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
+G+ V+ G G ++AV SL +L E + ++ H+ +L
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-----EANLMKQLQHQRLVRLYA 75
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP 485
+ + ++ +Y NG+L + L +++ + + + IA G+ ++
Sbjct: 76 VVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---N 129
Query: 486 FTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICIL----PSSLEA 541
+ +L ++ + +++ S K+ DF LAR ++ +GA + P ++
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFG-----LARLIEDAEXTAREGAKFPIKWTAPEAINY 184
Query: 542 RHLDVQGNIYAFGVLLLEIIS-GRPP 566
++ ++++FG+LL EI++ GR P
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 119/301 (39%), Gaps = 31/301 (10%)
Query: 354 ELEVACEDFSNI--IGSSPDSLVYKGT----MKGGPEIAVISLCIKEEHWTGYLELYFQR 407
E EV+ E + + +G +VY+G +KG E V + E + + F
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLN 69
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE--------RCQV 459
E + + + +LLG + P ++V + ++G L +L R
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQP--TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519
+ +++ IA G+ YL+ + F +L + + DF+ K+ DF + I
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 184
Query: 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK 579
G G + P SL+ ++++FGV+L EI S L +
Sbjct: 185 XXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-----------LAEQPY 233
Query: 580 DYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639
L +V+ +V+D + + + +++ +C + RP+ E+ +L+ + S
Sbjct: 234 QGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPS 293
Query: 640 I 640
Sbjct: 294 F 294
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 403 LYFQREVADLARINHENTGKLLGYCRESSPFTRM--LVFDYASNGTLYEHLHYGERCQVS 460
L F+RE + A +NH + +P + +V +Y TL + +H ++
Sbjct: 57 LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMT 114
Query: 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
R ++++ + L + H ++ + + ++ + K++DF +AR+
Sbjct: 115 PKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFG-----IARAI 166
Query: 521 KNPGTLGSQGAICI------LPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKD 570
+ G +Q A I P +D + ++Y+ G +L E+++G PP D
Sbjct: 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 403 LYFQREVADLARINHENTGKLLGYCRESSPFTRM--LVFDYASNGTLYEHLHYGERCQVS 460
L F+RE + A +NH + +P + +V +Y TL + +H ++
Sbjct: 57 LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMT 114
Query: 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
R ++++ + L + H ++ + + ++ + K++DF +AR+
Sbjct: 115 PKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFG-----IARAI 166
Query: 521 KNPGTLGSQGAICI------LPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKD 570
+ G +Q A I P +D + ++Y+ G +L E+++G PP D
Sbjct: 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 403 LYFQREVADLARINHENTGKLLGYCRESSPFTRM--LVFDYASNGTLYEHLHYGERCQVS 460
L F+RE + A +NH + +P + +V +Y TL + +H ++
Sbjct: 74 LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMT 131
Query: 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
R ++++ + L + H ++ + + ++ + K++DF +AR+
Sbjct: 132 PKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFG-----IARAI 183
Query: 521 KNPGTLGSQGAICI------LPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKD 570
+ G +Q A I P +D + ++Y+ G +L E+++G PP D
Sbjct: 184 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 239
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 75/167 (44%), Gaps = 15/167 (8%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F E + + H+ +L + P ++ ++ + G+L + L E +V +
Sbjct: 54 FLEEANLMKTLQHDKLVRLYAVVTKEEPI--YIITEFMAKGSLLDFLKSDEGGKVLLPKL 111
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ IA G+ Y+ + + +L ++ V ++E K+ DF LAR ++
Sbjct: 112 IDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFG-----LARVIEDNE 163
Query: 525 TLGSQGAICIL----PSSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+GA + P ++ ++ N+++FG+LL EI++ G+ P
Sbjct: 164 YTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
F +G+ +V G +G ++A+ IKE + E F E + ++HE
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYDVAI--KMIKEGSMS---EDEFIEEAKVMMNLSHEKLV 82
Query: 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE 481
+L G C + P ++ +Y +NG L +L R + + +++ + ++YL ++
Sbjct: 83 QLYGVCTKQRPI--FIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK 139
Query: 482 LGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSS-LE 540
F +L + + + K+ DF + +L ++ ++GS+ + P L
Sbjct: 140 ---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSSVGSKFPVRWSPPEVLM 194
Query: 541 ARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ +I+AFGVL+ EI S G+ P
Sbjct: 195 YSKFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
F +G+ +V G +G ++A+ IKE + E F E + ++HE
Sbjct: 8 FLKELGTGQFGVVKYGKWRGQYDVAI--KMIKEGSMS---EDEFIEEAKVMMNLSHEKLV 62
Query: 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE 481
+L G C + P ++ +Y +NG L +L R + + +++ + ++YL ++
Sbjct: 63 QLYGVCTKQRPI--FIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK 119
Query: 482 LGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSS-LE 540
F +L + + + K+ DF + +L ++ ++GS+ + P L
Sbjct: 120 ---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSSVGSKFPVRWSPPEVLM 174
Query: 541 ARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ +I+AFGVL+ EI S G+ P
Sbjct: 175 YSKFSSKSDIWAFGVLMWEIYSLGKMP 201
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 120/305 (39%), Gaps = 31/305 (10%)
Query: 350 FSRQELEVACEDFSNI--IGSSPDSLVYKGT----MKGGPEIAVISLCIKEEHWTGYLEL 403
F E EV+ E + + +G +VY+G +KG E V + E + +
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERI 65
Query: 404 YFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-------- 455
F E + + + +LLG + P ++V + ++G L +L
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQP--TLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 456 RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515
R + +++ IA G+ YL+ + F +L + + DF+ K+ DF + I
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV 575
G G + P SL+ ++++FGV+L EI S L
Sbjct: 181 YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-----------LA 229
Query: 576 DWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635
+ L +V+ +V+D + + + +++ +C + RP+ E+ +L+
Sbjct: 230 EQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
Query: 636 IDTSI 640
+ S
Sbjct: 290 LHPSF 294
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
F +G+ +V G +G ++A+ IKE + E F E + ++HE
Sbjct: 19 FLKELGTGQFGVVKYGKWRGQYDVAI--KMIKEGSMS---EDEFIEEAKVMMNLSHEKLV 73
Query: 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE 481
+L G C + P ++ +Y +NG L +L R + + +++ + ++YL ++
Sbjct: 74 QLYGVCTKQRPI--FIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK 130
Query: 482 LGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSS-LE 540
F +L + + + K+ DF + +L ++ ++GS+ + P L
Sbjct: 131 ---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSSVGSKFPVRWSPPEVLM 185
Query: 541 ARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ +I+AFGVL+ EI S G+ P
Sbjct: 186 YSKFSSKSDIWAFGVLMWEIYSLGKMP 212
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
F +G+ +V G +G ++A+ IKE + E F E + ++HE
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYDVAI--KMIKEGSMS---EDEFIEEAKVMMNLSHEKLV 67
Query: 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE 481
+L G C + P ++ +Y +NG L +L R + + +++ + ++YL ++
Sbjct: 68 QLYGVCTKQRPI--FIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK 124
Query: 482 LGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSS-LE 540
F +L + + + K+ DF + +L ++ ++GS+ + P L
Sbjct: 125 ---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSSVGSKFPVRWSPPEVLM 179
Query: 541 ARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ +I+AFGVL+ EI S G+ P
Sbjct: 180 YSKFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 109/282 (38%), Gaps = 27/282 (9%)
Query: 350 FSRQELEVACED-FSNI--IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQ 406
F+ Q V E+ F+ + IG VYKG E V+++ I + Q
Sbjct: 8 FANQHSRVDPEELFTKLDRIGKGSFGEVYKGIDNHTKE--VVAIKIIDLEEAEDEIEDIQ 65
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMK 466
+E+ L++ + + G +S+ ++ +Y G+ + L G + T
Sbjct: 66 QEITVLSQCDSPYITRYFGSYLKSTKL--WIIMEYLGGGSALDLLKPGP---LEETYIAT 120
Query: 467 IVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTL 526
I+ I +GL YLH+E ++ ++ V L+E KL DF + K +
Sbjct: 121 ILREILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV 177
Query: 527 GSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPE 586
G+ + P ++ D + +I++ G+ +E+ G PP L
Sbjct: 178 GT--PFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSD------------LHPMR 223
Query: 587 VMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
V+ + K E V C+N D RP+ +EL
Sbjct: 224 VLFLIPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKEL 265
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
F +G+ +V G +G ++A+ IKE + E F E + ++HE
Sbjct: 12 FLKELGTGQFGVVKYGKWRGQYDVAI--KMIKEGSMS---EDEFIEEAKVMMNLSHEKLV 66
Query: 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE 481
+L G C + P ++ +Y +NG L +L R + + +++ + ++YL ++
Sbjct: 67 QLYGVCTKQRPI--FIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK 123
Query: 482 LGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSS-LE 540
F +L + + + K+ DF + +L ++ ++GS+ + P L
Sbjct: 124 ---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSSVGSKFPVRWSPPEVLM 178
Query: 541 ARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ +I+AFGVL+ EI S G+ P
Sbjct: 179 YSKFSSKSDIWAFGVLMWEIYSLGKMP 205
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 96/220 (43%), Gaps = 23/220 (10%)
Query: 354 ELEVACEDFSNI--IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAD 411
E EV E + +G+ V+ G G ++AV SL +L E
Sbjct: 8 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-----EANL 62
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGI 471
+ ++ H+ +L + + ++ +Y NG+L + L +++ + + + I
Sbjct: 63 MKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 119
Query: 472 ARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGA 531
A G+ ++ + +L ++ + +++ S K+ DF LAR ++ +GA
Sbjct: 120 AEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEXTAREGA 171
Query: 532 ICIL----PSSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ P ++ ++ ++++FG+LL EI++ GR P
Sbjct: 172 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 211
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 96/220 (43%), Gaps = 23/220 (10%)
Query: 354 ELEVACEDFSNI--IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAD 411
E EV E + +G+ V+ G G ++AV SL +L E
Sbjct: 9 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-----EANL 63
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGI 471
+ ++ H+ +L + + ++ +Y NG+L + L +++ + + + I
Sbjct: 64 MKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 120
Query: 472 ARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGA 531
A G+ ++ + +L ++ + +++ S K+ DF LAR ++ +GA
Sbjct: 121 AEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEXTAREGA 172
Query: 532 ICIL----PSSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ P ++ ++ ++++FG+LL EI++ GR P
Sbjct: 173 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 212
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 96/220 (43%), Gaps = 23/220 (10%)
Query: 354 ELEVACEDFSNI--IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAD 411
E EV E + +G+ V+ G G ++AV SL +L E
Sbjct: 16 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-----EANL 70
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGI 471
+ ++ H+ +L + + ++ +Y NG+L + L +++ + + + I
Sbjct: 71 MKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 127
Query: 472 ARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGA 531
A G+ ++ + +L ++ + +++ S K+ DF LAR ++ +GA
Sbjct: 128 AEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEXTAREGA 179
Query: 532 ICIL----PSSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ P ++ ++ ++++FG+LL EI++ GR P
Sbjct: 180 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 219
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 96/220 (43%), Gaps = 23/220 (10%)
Query: 354 ELEVACEDFSNI--IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAD 411
E EV E + +G+ V+ G G ++AV SL +L E
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-----EANL 61
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGI 471
+ ++ H+ +L + + ++ +Y NG+L + L +++ + + + I
Sbjct: 62 MKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 118
Query: 472 ARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGA 531
A G+ ++ + +L ++ + +++ S K+ DF LAR ++ +GA
Sbjct: 119 AEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEXTAREGA 170
Query: 532 ICIL----PSSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ P ++ ++ ++++FG+LL EI++ GR P
Sbjct: 171 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 74/167 (44%), Gaps = 15/167 (8%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
F E + + H+ +L P ++ +Y + G+L + L E +V +
Sbjct: 55 FLEEANLMKTLQHDKLVRLYAVVTREEPI--YIITEYMAKGSLLDFLKSDEGGKVLLPKL 112
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ IA G+ Y+ + + +L ++ V ++E K+ DF LAR ++
Sbjct: 113 IDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFG-----LARVIEDNE 164
Query: 525 TLGSQGAICIL----PSSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+GA + P ++ ++ ++++FG+LL EI++ G+ P
Sbjct: 165 YTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 96/220 (43%), Gaps = 23/220 (10%)
Query: 354 ELEVACEDFSNI--IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAD 411
E EV E + +G+ V+ G G ++AV SL +L E
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-----EANL 61
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGI 471
+ ++ H+ +L + + ++ +Y NG+L + L +++ + + + I
Sbjct: 62 MKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 118
Query: 472 ARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGA 531
A G+ ++ + +L ++ + +++ S K+ DF LAR ++ +GA
Sbjct: 119 AEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEXTAREGA 170
Query: 532 ICIL----PSSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ P ++ ++ ++++FG+LL EI++ GR P
Sbjct: 171 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 96/220 (43%), Gaps = 23/220 (10%)
Query: 354 ELEVACEDFSNI--IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAD 411
E EV E + +G+ V+ G G ++AV SL +L E
Sbjct: 15 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-----EANL 69
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGI 471
+ ++ H+ +L + + ++ +Y NG+L + L +++ + + + I
Sbjct: 70 MKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 126
Query: 472 ARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGA 531
A G+ ++ + +L ++ + +++ S K+ DF LAR ++ +GA
Sbjct: 127 AEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEXTAREGA 178
Query: 532 ICIL----PSSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ P ++ ++ ++++FG+LL EI++ GR P
Sbjct: 179 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 218
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 7/159 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
+++E+ L + HE+ K G C + + LV +Y G+L ++L R + +
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQL 119
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE-KNP 523
+ I G+ YLH++ + L + V L D K+ DF K + E
Sbjct: 120 LLFAQQICEGMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 176
Query: 524 GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G P L+ ++++FGV L E+++
Sbjct: 177 REDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 20/166 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMK 466
REV L +++H N KL + + F LV + + G L++ + R + S +
Sbjct: 75 REVQLLKQLDHPNIXKLYEFFEDKGYF--YLVGEVYTGGELFDEII--SRKRFSEVDAAR 130
Query: 467 IVIGIARGLKY------LHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
I+ + G+ Y +H +L P + E S +D + +++DF T S+
Sbjct: 131 IIRQVLSGITYXHKNKIVHRDLKPENLLLESKS------KDANIRIIDF-GLSTHFEASK 183
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
K +G+ A I P L + D + ++++ GV+L ++SG PP
Sbjct: 184 KXKDKIGT--AYYIAPEVLHGTY-DEKCDVWSTGVILYILLSGCPP 226
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 96/220 (43%), Gaps = 23/220 (10%)
Query: 354 ELEVACEDFSNI--IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAD 411
E EV E + +G+ V+ G G ++AV SL +L E
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-----EANL 67
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGI 471
+ ++ H+ +L + + ++ +Y NG+L + L +++ + + + I
Sbjct: 68 MKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 124
Query: 472 ARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGA 531
A G+ ++ + +L ++ + +++ S K+ DF LAR ++ +GA
Sbjct: 125 AEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEXTAREGA 176
Query: 532 ICIL----PSSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ P ++ ++ ++++FG+LL EI++ GR P
Sbjct: 177 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 102/246 (41%), Gaps = 37/246 (15%)
Query: 408 EVADLARINHENTGKLLGYCRE--SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRM 465
EV L + HEN + +G + S L+ + G+L + L VSW
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN---VVSWNELC 124
Query: 466 KIVIGIARGLKYLHTEL-------GPPFTISELNSSAVYLTEDFSPKLVDFD-SWKTILA 517
I +ARGL YLH ++ P + ++ S V L + + + DF + K
Sbjct: 125 HIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAG 184
Query: 518 RSEKNP-GTLGSQGAICILPSSLEA-----RHLDVQGNIYAFGVLLLEIISGRPPCCKDK 571
+S + G +G++ + P LE R ++ ++YA G++L E+ S C
Sbjct: 185 KSAGDTHGQVGTRRYMA--PEVLEGAINFQRDAFLRIDMYAMGLVLWELAS---RCTAAD 239
Query: 572 GNLVDWAKDYLE-------LPEVMSYVVD----PELKHF--SYDDLKVICEVVNLCVNPD 618
G + ++ + E L ++ VV P L+ + + + ++CE + C + D
Sbjct: 240 GPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHD 299
Query: 619 ITKRPS 624
R S
Sbjct: 300 AEARLS 305
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
+G+ V+ G G ++AV SL +L E + ++ H+ +L
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-----EANLMKQLQHQRLVRLYA 70
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP 485
+ + ++ +Y NG+L + L +++ + + + IA G+ ++
Sbjct: 71 VVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---N 124
Query: 486 FTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICIL----PSSLEA 541
+ +L ++ + +++ S K+ DF LAR ++ +GA + P ++
Sbjct: 125 YIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEYTAREGAKFPIKWTAPEAINY 179
Query: 542 RHLDVQGNIYAFGVLLLEIIS-GRPP 566
++ ++++FG+LL EI++ GR P
Sbjct: 180 GTFTIKSDVWSFGILLTEIVTHGRIP 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 96/220 (43%), Gaps = 23/220 (10%)
Query: 354 ELEVACEDFSNI--IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAD 411
E EV E + +G+ V+ G G ++AV SL +L E
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-----EANL 67
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGI 471
+ ++ H+ +L + + ++ +Y NG+L + L +++ + + + I
Sbjct: 68 MKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 124
Query: 472 ARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGA 531
A G+ ++ + +L ++ + +++ S K+ DF LAR ++ +GA
Sbjct: 125 AEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEYTAREGA 176
Query: 532 ICIL----PSSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ P ++ ++ ++++FG+LL EI++ GR P
Sbjct: 177 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 96/220 (43%), Gaps = 23/220 (10%)
Query: 354 ELEVACEDFSNI--IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAD 411
E EV E + +G+ V+ G G ++AV SL +L E
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-----EANL 61
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGI 471
+ ++ H+ +L + + ++ +Y NG+L + L +++ + + + I
Sbjct: 62 MKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 118
Query: 472 ARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGA 531
A G+ ++ + +L ++ + +++ S K+ DF LAR ++ +GA
Sbjct: 119 AEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEYTAREGA 170
Query: 532 ICIL----PSSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ P ++ ++ ++++FG+LL EI++ GR P
Sbjct: 171 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 20/166 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMK 466
REV L +++H N KL + + F LV + + G L++ + R + S +
Sbjct: 75 REVQLLKQLDHPNIMKLYEFFEDKGYF--YLVGEVYTGGELFDEII--SRKRFSEVDAAR 130
Query: 467 IVIGIARGLKYLHT------ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
I+ + G+ Y+H +L P + E S +D + +++DF T S+
Sbjct: 131 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKS------KDANIRIIDF-GLSTHFEASK 183
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
K +G+ A I P L + D + ++++ GV+L ++SG PP
Sbjct: 184 KMKDKIGT--AYYIAPEVLHGTY-DEKCDVWSTGVILYILLSGCPP 226
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 20/166 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMK 466
REV L +++H N KL + + F LV + + G L++ + R + S +
Sbjct: 81 REVQLLKQLDHPNIMKLYEFFEDKGYF--YLVGEVYTGGELFDEII--SRKRFSEVDAAR 136
Query: 467 IVIGIARGLKYLHT------ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
I+ + G+ Y+H +L P + E S +D + +++DF T S+
Sbjct: 137 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKS------KDANIRIIDF-GLSTHFEASK 189
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
K +G+ A I P L + D + ++++ GV+L ++SG PP
Sbjct: 190 KMKDKIGT--AYYIAPEVLHGTY-DEKCDVWSTGVILYILLSGCPP 232
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 20/166 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMK 466
REV L +++H N KL + + F LV + + G L++ + R + S +
Sbjct: 98 REVQLLKQLDHPNIMKLYEFFEDKGYF--YLVGEVYTGGELFDEII--SRKRFSEVDAAR 153
Query: 467 IVIGIARGLKYLHT------ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
I+ + G+ Y+H +L P + E S +D + +++DF T S+
Sbjct: 154 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKS------KDANIRIIDF-GLSTHFEASK 206
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
K +G+ A I P L + D + ++++ GV+L ++SG PP
Sbjct: 207 KMKDKIGT--AYYIAPEVLHGTY-DEKCDVWSTGVILYILLSGCPP 249
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 73/167 (43%), Gaps = 18/167 (10%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH----YGERCQVS 460
F+REV + ++++H+N ++ E + LV +Y TL E++ ++
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCY--YLVMEYIEGPTLSEYIESHGPLSVDTAIN 115
Query: 461 WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS- 519
+T ++ I A ++ +H ++ P + + N + K+ DF K + S
Sbjct: 116 FTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTL---------KIFDFGIAKALSETSL 166
Query: 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
+ LG+ P + D +IY+ G++L E++ G PP
Sbjct: 167 TQTNHVLGTVQYFS--PEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
F +G+ +V G +G ++A+ IKE + E F E + ++HE
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYDVAI--KMIKEGSMS---EDEFIEEAKVMMNLSHEKLV 67
Query: 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE 481
+L G C + P ++ +Y +NG L +L R + + +++ + ++YL ++
Sbjct: 68 QLYGVCTKQRPI--FIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK 124
Query: 482 LGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSS-LE 540
F +L + + + K+ DF + +L ++ + GS+ + P L
Sbjct: 125 ---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSSRGSKFPVRWSPPEVLM 179
Query: 541 ARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ +I+AFGVL+ EI S G+ P
Sbjct: 180 YSKFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 406 QREVADLARINHENTGKLLG-YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
Q+E+ L++ + K G Y +++ + ++ +Y G+ + L G + T+
Sbjct: 68 QQEITVLSQCDSPYVTKYYGSYLKDTKLW---IIMEYLGGGSALDLLEPGP---LDETQI 121
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
I+ I +GL YLH+E ++ ++ V L+E KL DF + K
Sbjct: 122 ATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX 178
Query: 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLEL 584
+G+ + P ++ D + +I++ G+ +E+ G PP + L
Sbjct: 179 FVGT--PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE------------LHP 224
Query: 585 PEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
+V+ + + K + E V C+N + + RP+ +EL
Sbjct: 225 MKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKEL 268
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 20/166 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMK 466
REV L +++H N KL + + F LV + + G L++ + R + S +
Sbjct: 99 REVQLLKQLDHPNIMKLYEFFEDKGYF--YLVGEVYTGGELFDEII--SRKRFSEVDAAR 154
Query: 467 IVIGIARGLKYLHT------ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
I+ + G+ Y+H +L P + E S +D + +++DF T S+
Sbjct: 155 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKS------KDANIRIIDF-GLSTHFEASK 207
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
K +G+ A I P L + D + ++++ GV+L ++SG PP
Sbjct: 208 KMKDKIGT--AYYIAPEVLHGTY-DEKCDVWSTGVILYILLSGCPP 250
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 98/224 (43%), Gaps = 24/224 (10%)
Query: 406 QREVADLARINHENTGKLLG-YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
Q+E+ L++ + K G Y +++ + ++ +Y G+ + L G + T+
Sbjct: 73 QQEITVLSQCDSPYVTKYYGSYLKDTKLW---IIMEYLGGGSALDLLEPG---PLDETQI 126
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
I+ I +GL YLH+E ++ ++ V L+E KL DF + K
Sbjct: 127 ATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 183
Query: 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLEL 584
+G+ + P ++ D + +I++ G+ +E+ G PP + + K +
Sbjct: 184 FVGT--PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE-----LHPMKVLFLI 236
Query: 585 PEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
P+ +P +Y K + E V C+N + + RP+ +EL
Sbjct: 237 PKN-----NPPTLEGNYS--KPLKEFVEACLNKEPSFRPTAKEL 273
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 96/220 (43%), Gaps = 23/220 (10%)
Query: 354 ELEVACEDFSNI--IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAD 411
E EV E + +G+ V+ G G ++AV SL +L E
Sbjct: 12 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-----EANL 66
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGI 471
+ ++ H+ +L + + ++ +Y NG+L + L +++ + + + I
Sbjct: 67 MKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 123
Query: 472 ARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGA 531
A G+ ++ + +L ++ + +++ S K+ DF LAR ++ +GA
Sbjct: 124 AEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEYTAREGA 175
Query: 532 ICIL----PSSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ P ++ ++ ++++FG+LL EI++ GR P
Sbjct: 176 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 7/159 (4%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
+++E+ L + HE+ K G C + + LV +Y G+L ++L R + +
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQL 119
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE-KNP 523
+ I G+ YLH + + L + V L D K+ DF K + E
Sbjct: 120 LLFAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 176
Query: 524 GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G P L+ ++++FGV L E+++
Sbjct: 177 REDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 406 QREVADLARINHENTGKLLG-YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
Q+E+ L++ + K G Y +++ + ++ +Y G+ + L G + T+
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLW---IIMEYLGGGSALDLLEPG---PLDETQI 106
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
I+ I +GL YLH+E ++ ++ V L+E KL DF + K
Sbjct: 107 ATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 163
Query: 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLEL 584
+G+ + P ++ D + +I++ G+ +E+ G PP + L
Sbjct: 164 FVGT--PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE------------LHP 209
Query: 585 PEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
+V+ + + K + E V C+N + + RP+ +EL
Sbjct: 210 MKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKEL 253
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 406 QREVADLARINHENTGKLLG-YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
Q+E+ L++ + K G Y +++ + ++ +Y G+ + L G + T+
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLW---IIMEYLGGGSALDLLEPG---PLDETQI 106
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
I+ I +GL YLH+E ++ ++ V L+E KL DF + K
Sbjct: 107 ATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX 163
Query: 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLEL 584
+G+ + P ++ D + +I++ G+ +E+ G PP + L
Sbjct: 164 FVGT--PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE------------LHP 209
Query: 585 PEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
+V+ + + K + E V C+N + + RP+ +EL
Sbjct: 210 MKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKEL 253
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 96/220 (43%), Gaps = 23/220 (10%)
Query: 354 ELEVACEDFSNI--IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAD 411
E EV E + +G+ V+ G G ++AV SL +L E
Sbjct: 17 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-----EANL 71
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGI 471
+ ++ H+ +L + + ++ +Y NG+L + L +++ + + + I
Sbjct: 72 MKQLQHQRLVRLYAVVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 128
Query: 472 ARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGA 531
A G+ ++ + +L ++ + +++ S K+ DF LAR ++ +GA
Sbjct: 129 AEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFG-----LARLIEDNEYTAREGA 180
Query: 532 ICIL----PSSLEARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ P ++ ++ ++++FG+LL EI++ GR P
Sbjct: 181 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 220
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 118/301 (39%), Gaps = 31/301 (10%)
Query: 354 ELEVACEDFSNI--IGSSPDSLVYKGT----MKGGPEIAVISLCIKEEHWTGYLELYFQR 407
E EV+ E + + +G +VY+G +KG E V + E + + F
Sbjct: 12 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLN 70
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE--------RCQV 459
E + + + +LLG + P ++V + ++G L +L R
Sbjct: 71 EASVMKGFTCHHVVRLLGVVSKGQP--TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 128
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519
+ +++ IA G+ YL+ + F L + + DF+ K+ DF + I
Sbjct: 129 TLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD 185
Query: 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK 579
G G + P SL+ ++++FGV+L EI S L +
Sbjct: 186 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-----------LAEQPY 234
Query: 580 DYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639
L +V+ +V+D + + + +++ +C + RP+ E+ +L+ + S
Sbjct: 235 QGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPS 294
Query: 640 I 640
Sbjct: 295 F 295
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT-GKLL 424
IG V+ G +G + +E W + + E+ + HEN G +
Sbjct: 45 IGKGRYGEVWMGKWRGEKVAVKVFFTTEEASW------FRETEIYQTVLMRHENILGFIA 98
Query: 425 GYCRESSPFTRM-LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL- 482
+ + +T++ L+ DY NG+LY++L + + +K+ GL +LHTE+
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 483 ----GPPFTISELNSSAVYLTEDFSPKLVDFD-SWKTILARSEKN--PGT-LGSQGAIC- 533
P +L S + + ++ + + D + K I +E + P T +G++ +
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
Query: 534 -ILPSSLEARHLD--VQGNIYAFGVLLLEI 560
+L SL H + ++Y+FG++L E+
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 90/206 (43%), Gaps = 21/206 (10%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
+G+ V+ G G ++AV SL +L E + ++ H+ +L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-----EANLMKQLQHQRLVRLYA 71
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP 485
+ + ++ +Y NG+L + L +++ + + + IA G+ ++
Sbjct: 72 VVTQEPIY---IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---N 125
Query: 486 FTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICIL----PSSLEA 541
+ L ++ + +++ S K+ DF LAR ++ +GA + P ++
Sbjct: 126 YIHRNLRAANILVSDTLSCKIADFG-----LARLIEDNEYTAREGAKFPIKWTAPEAINY 180
Query: 542 RHLDVQGNIYAFGVLLLEIIS-GRPP 566
++ ++++FG+LL EI++ GR P
Sbjct: 181 GTFTIKSDVWSFGILLTEIVTHGRIP 206
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 118/301 (39%), Gaps = 31/301 (10%)
Query: 354 ELEVACEDFSNI--IGSSPDSLVYKGT----MKGGPEIAVISLCIKEEHWTGYLELYFQR 407
E EV+ E + + +G +VY+G +KG E V + E + + F
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLN 69
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE--------RCQV 459
E + + + +LLG + P ++V + ++G L +L R
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQP--TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 460 SWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519
+ +++ IA G+ YL+ + F L + + DF+ K+ DF + I
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD 184
Query: 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK 579
G G + P SL+ ++++FGV+L EI S L +
Sbjct: 185 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-----------LAEQPY 233
Query: 580 DYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639
L +V+ +V+D + + + +++ +C + RP+ E+ +L+ + S
Sbjct: 234 QGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPS 293
Query: 640 I 640
Sbjct: 294 F 294
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/287 (19%), Positives = 112/287 (39%), Gaps = 29/287 (10%)
Query: 366 IGSSPDSLVYKGT----MKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
+G +VY+G +KG E V + E + + F E + + +
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVV 82
Query: 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE--------RCQVSWTRRMKIVIGIAR 473
+LLG + P ++V + ++G L +L R + +++ IA
Sbjct: 83 RLLGVVSKGQP--TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 140
Query: 474 GLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAIC 533
G+ YL+ + F +L + + DF+ K+ DF + I G G
Sbjct: 141 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 534 ILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593
+ P SL+ ++++FGV+L EI S L + L +V+ +V+D
Sbjct: 198 MAPESLKDGVFTTSSDMWSFGVVLWEITS-----------LAEQPYQGLSNEQVLKFVMD 246
Query: 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640
+ + + +++ +C + RP+ E+ +L+ + S
Sbjct: 247 GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSF 293
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 118/301 (39%), Gaps = 38/301 (12%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELY--FQ 406
F R L+ F +G+ V + T G G E AV+ + +K T + +
Sbjct: 43 FPRNNLQ-----FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 407 REVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERC-------- 457
E+ ++ + HEN LLG C P +++ +Y G L L R
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPV--LVITEYCCYGDLLNFLRRKSRVLETDPAFA 155
Query: 458 ----QVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513
+S + +A+G+ +L ++ ++ N V LT K+ DF +
Sbjct: 156 IANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARN---VLLTNGHVAKIGDFGLAR 212
Query: 514 TILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKG 572
I+ S + P S+ VQ +++++G+LL EI S G P G
Sbjct: 213 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY---PG 269
Query: 573 NLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTML 632
LV+ + +L + + P K I ++ C + T RP+ Q++C+ L
Sbjct: 270 ILVN--SKFYKLVKDGYQMAQPAFAP------KNIYSIMQACWALEPTHRPTFQQICSFL 321
Query: 633 E 633
+
Sbjct: 322 Q 322
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 119/301 (39%), Gaps = 38/301 (12%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELY--FQ 406
F R L+ F +G+ V + T G G E AV+ + +K T + +
Sbjct: 43 FPRNNLQ-----FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 407 REVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERC-------- 457
E+ ++ + HEN LLG C P +++ +Y G L L R
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPV--LVITEYCCYGDLLNFLRRKSRVLETDPAFA 155
Query: 458 ---QVSWTRRM-KIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513
+ TR + +A+G+ +L ++ ++ N V LT K+ DF +
Sbjct: 156 IANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARN---VLLTNGHVAKIGDFGLAR 212
Query: 514 TILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKG 572
I+ S + P S+ VQ +++++G+LL EI S G P G
Sbjct: 213 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY---PG 269
Query: 573 NLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTML 632
LV+ + +L + + P K I ++ C + T RP+ Q++C+ L
Sbjct: 270 ILVN--SKFYKLVKDGYQMAQPAFAP------KNIYSIMQACWALEPTHRPTFQQICSFL 321
Query: 633 E 633
+
Sbjct: 322 Q 322
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 91/207 (43%), Gaps = 15/207 (7%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
F IGS LV+ G ++A+ + IKE + E F E + +++H
Sbjct: 31 FVQEIGSGQFGLVHLGYWLNKDKVAIKT--IKEGSMS---EDDFIEEAEVMMKLSHPKLV 85
Query: 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE 481
+L G C E +P LVF++ +G L ++L +R + + + + + G+ YL
Sbjct: 86 QLYGVCLEQAPIC--LVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLEEA 142
Query: 482 LGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAI-CILPSSLE 540
+L + + E+ K+ DF + +L ++ + G++ + P
Sbjct: 143 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVL--DDQYTSSTGTKFPVKWASPEVFS 197
Query: 541 ARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ ++++FGVL+ E+ S G+ P
Sbjct: 198 FSRYSSKSDVWSFGVLMWEVFSEGKIP 224
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 83/204 (40%), Gaps = 22/204 (10%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IG V+ G ++ + + C E L+ F +E L + +H N +L+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSC--RETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHY-GERCQVSWTRRMKIVIGIARGLKYLHTELGP 484
C + P +V + G L G R +V +++V A G++YL ++
Sbjct: 180 VCTQKQPI--YIVMELVQGGDFLTFLRTEGARLRVKTL--LQMVGDAAAGMEYLESKC-- 233
Query: 485 PFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAI------CILPSS 538
+L + +TE K+ DF ++R E + G + G + P +
Sbjct: 234 -CIHRDLAARNCLVTEKNVLKISDFG-----MSREEAD-GVXAASGGLRQVPVKWTAPEA 286
Query: 539 LEARHLDVQGNIYAFGVLLLEIIS 562
L + ++++FG+LL E S
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFS 310
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 89/225 (39%), Gaps = 29/225 (12%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE-NT 420
F ++IG V K +K ++ +E+ + F E+ L ++ H N
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQ--------------VSWTRRMK 466
LLG C L +YA +G L + L + +S + +
Sbjct: 89 INLLGACEHRGYL--YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 467 IVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN--PG 524
+ARG+ YL + F +L + + + E++ K+ DF L+R ++
Sbjct: 147 FAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG-----LSRGQEVYVKK 198
Query: 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS--GRPPC 567
T+G + SL +++++GVLL EI+S G P C
Sbjct: 199 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 243
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 89/225 (39%), Gaps = 29/225 (12%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE-NT 420
F ++IG V K +K ++ +E+ + F E+ L ++ H N
Sbjct: 19 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQ--------------VSWTRRMK 466
LLG C L +YA +G L + L + +S + +
Sbjct: 79 INLLGACEHRGYL--YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 136
Query: 467 IVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN--PG 524
+ARG+ YL + F +L + + + E++ K+ DF L+R ++
Sbjct: 137 FAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG-----LSRGQEVYVKK 188
Query: 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS--GRPPC 567
T+G + SL +++++GVLL EI+S G P C
Sbjct: 189 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 233
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 83/204 (40%), Gaps = 22/204 (10%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IG V+ G ++ + + C E L+ F +E L + +H N +L+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSC--RETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHY-GERCQVSWTRRMKIVIGIARGLKYLHTELGP 484
C + P +V + G L G R +V +++V A G++YL ++
Sbjct: 180 VCTQKQPI--YIVMELVQGGDFLTFLRTEGARLRVKTL--LQMVGDAAAGMEYLESKC-- 233
Query: 485 PFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAI------CILPSS 538
+L + +TE K+ DF ++R E + G + G + P +
Sbjct: 234 -CIHRDLAARNCLVTEKNVLKISDFG-----MSREEAD-GVYAASGGLRQVPVKWTAPEA 286
Query: 539 LEARHLDVQGNIYAFGVLLLEIIS 562
L + ++++FG+LL E S
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFS 310
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 15/207 (7%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
F IGS LV+ G ++A+ + I+E + E F E + +++H
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDKVAIKT--IREGAMS---EEDFIEEAEVMMKLSHPKLV 65
Query: 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE 481
+L G C E +P LVF++ +G L ++L +R + + + + + G+ YL
Sbjct: 66 QLYGVCLEQAPIC--LVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLEE- 121
Query: 482 LGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAI-CILPSSLE 540
+L + + E+ K+ DF + +L ++ + G++ + P
Sbjct: 122 --ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVL--DDQYTSSTGTKFPVKWASPEVFS 177
Query: 541 ARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ ++++FGVL+ E+ S G+ P
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 35/177 (19%)
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL-------------------- 451
L ++NH + KL G C + P +L+ +YA G+L L
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPL--LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 452 ---HYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVD 508
H ER ++ + I++G++YL E+ +L + + + E K+ D
Sbjct: 138 SLDHPDERA-LTMGDLISFAWQISQGMQYL-AEMS--LVHRDLAARNILVAEGRKMKISD 193
Query: 509 FDSWKTILARSEKNPGTLGSQGAICILPSSLEA--RHL-DVQGNIYAFGVLLLEIIS 562
F + + E++ SQG I + ++E+ H+ Q ++++FGVLL EI++
Sbjct: 194 FGLSRDVY---EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 90/207 (43%), Gaps = 15/207 (7%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
F IGS LV+ G ++A+ + I+E E F E + +++H
Sbjct: 9 FVQEIGSGQFGLVHLGYWLNKDKVAIKT--IRE---GAMSEEDFIEEAEVMMKLSHPKLV 63
Query: 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE 481
+L G C E +P LVF++ +G L ++L +R + + + + + G+ YL
Sbjct: 64 QLYGVCLEQAPIC--LVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 482 LGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAI-CILPSSLE 540
+L + + E+ K+ DF + +L ++ + G++ + P
Sbjct: 121 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVL--DDQYTSSTGTKFPVKWASPEVFS 175
Query: 541 ARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ ++++FGVL+ E+ S G+ P
Sbjct: 176 FSRYSSKSDVWSFGVLMWEVFSEGKIP 202
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 119/303 (39%), Gaps = 40/303 (13%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELY--FQ 406
F R L+ F +G+ V + T G G E AV+ + +K T + +
Sbjct: 43 FPRNNLQ-----FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 407 REVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLH------------- 452
E+ ++ + HEN LLG C P +++ +Y G L L
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPV--LVITEYCCYGDLLNFLRRKRPPGLEYSYNP 155
Query: 453 -YGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDS 511
+ Q+S + +A+G+ +L ++ ++ N V LT K+ DF
Sbjct: 156 SHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARN---VLLTNGHVAKIGDFGL 212
Query: 512 WKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKD 570
+ I+ S + P S+ VQ +++++G+LL EI S G P
Sbjct: 213 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY--- 269
Query: 571 KGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630
G LV+ + +L + + P K I ++ C + T RP+ Q++C+
Sbjct: 270 PGILVN--SKFYKLVKDGYQMAQPAFAP------KNIYSIMQACWALEPTHRPTFQQICS 321
Query: 631 MLE 633
L+
Sbjct: 322 FLQ 324
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 35/177 (19%)
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL-------------------- 451
L ++NH + KL G C + P +L+ +YA G+L L
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPL--LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 452 ---HYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVD 508
H ER ++ + I++G++YL E+ +L + + + E K+ D
Sbjct: 138 SLDHPDERA-LTMGDLISFAWQISQGMQYL-AEM--KLVHRDLAARNILVAEGRKMKISD 193
Query: 509 FDSWKTILARSEKNPGTLGSQGAICILPSSLEA--RHL-DVQGNIYAFGVLLLEIIS 562
F + + E++ SQG I + ++E+ H+ Q ++++FGVLL EI++
Sbjct: 194 FGLSRDVY---EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 90/207 (43%), Gaps = 15/207 (7%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
F IGS LV+ G ++A+ + I+E E F E + +++H
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDKVAIKT--IRE---GAMSEEDFIEEAEVMMKLSHPKLV 65
Query: 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE 481
+L G C E +P LVF++ +G L ++L +R + + + + + G+ YL
Sbjct: 66 QLYGVCLEQAPIC--LVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 482 LGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAI-CILPSSLE 540
+L + + E+ K+ DF + +L ++ + G++ + P
Sbjct: 123 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVL--DDQYTSSTGTKFPVKWASPEVFS 177
Query: 541 ARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ ++++FGVL+ E+ S G+ P
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 90/207 (43%), Gaps = 15/207 (7%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
F IGS LV+ G ++A+ + I+E E F E + +++H
Sbjct: 14 FVQEIGSGQFGLVHLGYWLNKDKVAIKT--IRE---GAMSEEDFIEEAEVMMKLSHPKLV 68
Query: 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE 481
+L G C E +P LVF++ +G L ++L +R + + + + + G+ YL
Sbjct: 69 QLYGVCLEQAPIC--LVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLEEA 125
Query: 482 LGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAI-CILPSSLE 540
+L + + E+ K+ DF + +L ++ + G++ + P
Sbjct: 126 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVL--DDQYTSSTGTKFPVKWASPEVFS 180
Query: 541 ARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ ++++FGVL+ E+ S G+ P
Sbjct: 181 FSRYSSKSDVWSFGVLMWEVFSEGKIP 207
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 88/225 (39%), Gaps = 29/225 (12%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE-NT 420
F ++IG V K +K ++ +E+ + F E+ L ++ H N
Sbjct: 26 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQ--------------VSWTRRMK 466
LLG C L +YA +G L + L + +S + +
Sbjct: 86 INLLGACEHRGYL--YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 143
Query: 467 IVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN--PG 524
+ARG+ YL + F L + + + E++ K+ DF L+R ++
Sbjct: 144 FAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFG-----LSRGQEVYVKK 195
Query: 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS--GRPPC 567
T+G + SL +++++GVLL EI+S G P C
Sbjct: 196 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 240
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 11/142 (7%)
Query: 429 ESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTI 488
ESS F LVFD G L+++L E+ +S I+ + + +LH
Sbjct: 170 ESSSFM-FLVFDLMRKGELFDYL--TEKVALSEKETRSIMRSLLEAVSFLHAN---NIVH 223
Query: 489 SELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAIC--ILPSSLEARH--L 544
+L + L ++ +L DF + L EK G+ G + IL S++ H
Sbjct: 224 RDLKPENILLDDNMQIRLSDF-GFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGY 282
Query: 545 DVQGNIYAFGVLLLEIISGRPP 566
+ +++A GV+L +++G PP
Sbjct: 283 GKEVDLWACGVILFTLLAGSPP 304
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 116/297 (39%), Gaps = 34/297 (11%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELY--FQ 406
F R L+ F +G+ V + T G G E AV+ + +K T + +
Sbjct: 35 FPRNNLQ-----FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 89
Query: 407 REVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVS----- 460
E+ ++ + HEN LLG C P +++ +Y G L L +
Sbjct: 90 SELKIMSHLGQHENIVNLLGACTHGGPV--LVITEYCCYGDLLNFLRRKAEADLDKEDGR 147
Query: 461 ---WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517
+ +A+G+ +L ++ ++ N V LT K+ DF + I+
Sbjct: 148 PLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARN---VLLTNGHVAKIGDFGLARDIMN 204
Query: 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVD 576
S + P S+ VQ +++++G+LL EI S G P G LV+
Sbjct: 205 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY---PGILVN 261
Query: 577 WAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+ +L + + P K I ++ C + T RP+ Q++C+ L+
Sbjct: 262 --SKFYKLVKDGYQMAQPAFAP------KNIYSIMQACWALEPTHRPTFQQICSFLQ 310
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 109/252 (43%), Gaps = 45/252 (17%)
Query: 406 QREVADLARI-NHENTGKLLGYC-RE-SSPFTRMLVFDYASNGTLYEHL-------HYGE 455
QRE AD+ R+ NH N +L+ YC RE + L+ + GTL+ + ++
Sbjct: 74 QRE-ADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLT 132
Query: 456 RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515
Q+ W +++GI RGL+ +H + + +L + + L ++ P L+D S
Sbjct: 133 EDQILW-----LLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184
Query: 516 LARSEKNPGTLGSQ---GAICIL----PSSLEARH---LDVQGNIYAFGVLLLEIISGRP 565
E + L Q C + P + +D + ++++ G +L ++ G
Sbjct: 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEG 244
Query: 566 P--CCKDKGNLVDWA-KDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKR 622
P KG+ V A ++ L +P+ P +H S + +++N + D +R
Sbjct: 245 PYDMVFQKGDSVALAVQNQLSIPQ------SP--RHSS-----ALWQLLNSMMTVDPHQR 291
Query: 623 PSMQELCTMLEG 634
P + L + LE
Sbjct: 292 PHIPLLLSQLEA 303
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 35/177 (19%)
Query: 412 LARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL-------------------- 451
L ++NH + KL G C + P +L+ +YA G+L L
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPL--LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 452 ---HYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVD 508
H ER ++ + I++G++YL E+ +L + + + E K+ D
Sbjct: 138 SLDHPDERA-LTMGDLISFAWQISQGMQYL-AEM--KLVHRDLAARNILVAEGRKMKISD 193
Query: 509 FDSWKTILARSEKNPGTLGSQGAICILPSSLEA--RHL-DVQGNIYAFGVLLLEIIS 562
F + + E++ SQG I + ++E+ H+ Q ++++FGVLL EI++
Sbjct: 194 FGLSRDVY---EEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 12/167 (7%)
Query: 467 IVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE--KNPG 524
I+ + GL+YLH ++ + + L ED S ++ DF + + +N
Sbjct: 121 ILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV 177
Query: 525 TLGSQGAIC-ILPSSLE-ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYL 582
G C + P +E R D + +I++FG+ +E+ +G P K V
Sbjct: 178 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN 237
Query: 583 ELPEVMSYVVDPE-LKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
+ P + + V D E LK + K ++++LC+ D KRP+ EL
Sbjct: 238 DPPSLETGVQDKEMLKKYG----KSFRKMISLCLQKDPEKRPTAAEL 280
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 12/167 (7%)
Query: 467 IVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE--KNPG 524
I+ + GL+YLH ++ + + L ED S ++ DF + + +N
Sbjct: 126 ILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV 182
Query: 525 TLGSQGAIC-ILPSSLE-ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYL 582
G C + P +E R D + +I++FG+ +E+ +G P K V
Sbjct: 183 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN 242
Query: 583 ELPEVMSYVVDPE-LKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
+ P + + V D E LK + K ++++LC+ D KRP+ EL
Sbjct: 243 DPPSLETGVQDKEMLKKYG----KSFRKMISLCLQKDPEKRPTAAEL 285
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 116/297 (39%), Gaps = 34/297 (11%)
Query: 350 FSRQELEVACEDFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELY--FQ 406
F R L+ F +G+ V + T G G E AV+ + +K T + +
Sbjct: 43 FPRNNLQ-----FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 407 REVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVS----- 460
E+ ++ + HEN LLG C P +++ +Y G L L +
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPV--LVITEYCCYGDLLNFLRRKAEADLDKEDGR 155
Query: 461 ---WTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517
+ +A+G+ +L ++ ++ N V LT K+ DF + I+
Sbjct: 156 PLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARN---VLLTNGHVAKIGDFGLARDIMN 212
Query: 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVD 576
S + P S+ VQ +++++G+LL EI S G P G LV+
Sbjct: 213 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY---PGILVN 269
Query: 577 WAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
+ +L + + P K I ++ C + T RP+ Q++C+ L+
Sbjct: 270 --SKFYKLVKDGYQMAQPAFAP------KNIYSIMQACWALEPTHRPTFQQICSFLQ 318
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Query: 467 IVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTL 526
+ + + R L YLH + ++ S ++ LT D KL DF + K +
Sbjct: 146 VCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV 202
Query: 527 GSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
G+ + P + + +I++ G++++E+I G PP
Sbjct: 203 GT--PYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 94/247 (38%), Gaps = 39/247 (15%)
Query: 408 EVADLARINHENTGKLLGYCRESSPFTR-----------MLVFDYASNGTLYEHLHYGER 456
EV LA +NH+ + E F + + +Y NGTLY+ +H E
Sbjct: 52 EVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIH-SEN 110
Query: 457 CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT-- 514
++ I L Y+H++ +L +++ E + K+ DF K
Sbjct: 111 LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVH 167
Query: 515 ----ILARSEKN-PG-----TLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISG 563
IL +N PG T A+ + L+ H + + ++Y+ G++ E+I
Sbjct: 168 RSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP 227
Query: 564 RPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRP 623
+ L +E P P+ F + +KV +++ L ++ D KRP
Sbjct: 228 FSTGMERVNILKKLRSVSIEFP--------PD---FDDNKMKVEKKIIRLLIDHDPNKRP 276
Query: 624 SMQELCT 630
+ L
Sbjct: 277 GARTLLN 283
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 15/88 (17%)
Query: 545 DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS----YVVDPELKHFS 600
DV+ ++++ G+ L E+ +GR P K W + +L +V+ + + E + FS
Sbjct: 207 DVRSDVWSLGITLYELATGRFPYPK-------WNSVFDQLTQVVKGDPPQLSNSEEREFS 259
Query: 601 YDDLKVICEVVNLCVNPDITKRPSMQEL 628
VNLC+ D +KRP +EL
Sbjct: 260 ----PSFINFVNLCLTKDESKRPKYKEL 283
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 91/224 (40%), Gaps = 41/224 (18%)
Query: 378 TMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRM 436
+++ G E AV + E G+ REV L + ++N +L+ + + + F
Sbjct: 34 SLQNGKEYAVKII----EKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRF--Y 87
Query: 437 LVFDYASNGTLYEHL----HYGERCQVSWTRRMKIVIGIARGLKYLHT------ELGPPF 486
LVF+ G++ H+ H+ ER ++V +A L +LHT +L P
Sbjct: 88 LVFEKLQGGSILAHIQKQKHFNER------EASRVVRDVAAALDFLHTKGIAHRDLKPEN 141
Query: 487 TISELNSSAVYLTEDFSP-KLVDFDSWKTILARSEKNPGTLGSQGAIC-----ILPSSLE 540
+ E E SP K+ DFD + + P T C + P +E
Sbjct: 142 ILCES-------PEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVE 194
Query: 541 -----ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK 579
A D + ++++ GV+L ++SG PP G W +
Sbjct: 195 VFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDR 238
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 22/216 (10%)
Query: 360 EDFSNIIGSSPD-SLVYKGTMKGGPEIA---VISLCIKEEHWTGYLELYFQREVADLARI 415
EDF IIG D VYK K +A VI +EE LE Y E+ LA
Sbjct: 11 EDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEE-----LEDYMV-EIDILASC 64
Query: 416 NHENTGKLL-GYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARG 474
+H N KLL + E++ + ++ ++ + G + + ER ++ ++ +
Sbjct: 65 DHPNIVKLLDAFYYENNLW---ILIEFCAGGAVDAVMLELER-PLTESQIQVVCKQTLDA 120
Query: 475 LKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDF----DSWKTILARSEKNPGTLGSQG 530
L YLH +L + + T D KL DF + +T + R + GT
Sbjct: 121 LNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMA 177
Query: 531 AICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
++ + + R D + ++++ G+ L+E+ PP
Sbjct: 178 PEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 97/248 (39%), Gaps = 42/248 (16%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTL--YEHLHYGERCQVSWTRR 464
RE+ L ++ HEN LL C++ + LVF++ + L E G QV
Sbjct: 73 REIKLLKQLRHENLVNLLEVCKKKKRWY--LVFEFVDHTILDDLELFPNGLDYQVVQKYL 130
Query: 465 MKIV--IGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKN 522
+I+ IG +H ++ P + +++ KL DF +T+ A
Sbjct: 131 FQIINGIGFCHSHNIIHRDIKP---------ENILVSQSGVVKLCDFGFARTLAA----- 176
Query: 523 PGTLGSQGAICILPSSLEARHLDVQG----NIYAFGVLLLEIISGRPPCCKDK------- 571
PG + + E DV+ +++A G L+ E+ G P D
Sbjct: 177 PGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYH 236
Query: 572 -----GNLVDWAKDYLELPEVMSYVVDPELKHFS-----YDDL-KVICEVVNLCVNPDIT 620
GNL+ ++ V + V PE+K Y L +V+ ++ C++ D
Sbjct: 237 IMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPD 296
Query: 621 KRPSMQEL 628
KRP EL
Sbjct: 297 KRPFCAEL 304
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 27/162 (16%)
Query: 473 RGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAI 532
+ L++LH+ ++ S + L D S KL DF I K +G+
Sbjct: 127 QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT--PY 181
Query: 533 CILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYL-ELPEVMSYV 591
+ P + + + +I++ G++ +E+I G PP YL E P Y+
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP--------------YLNENPLRALYL 227
Query: 592 V----DPELKHFSYDDLKVIC-EVVNLCVNPDITKRPSMQEL 628
+ PEL++ + L I + +N C++ D+ KR S +EL
Sbjct: 228 IATNGTPELQN--PEKLSAIFRDFLNRCLDMDVEKRGSAKEL 267
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 83/214 (38%), Gaps = 19/214 (8%)
Query: 365 IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKL 423
++G+ VYKG ++A I + TG E ++E+ L + +H N
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVM----DVTGDEEEEIKQEINMLKKYSHHRNIATY 86
Query: 424 LG-YCRESSPFTR---MLVFDYASNGTLYEHLH--YGERCQVSWTRRMKIVIGIARGLKY 477
G + +++ P LV ++ G++ + + G + W I I RGL +
Sbjct: 87 YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI--AYICREILRGLSH 144
Query: 478 LHTELGPPFTISELNSSAVYLTEDFSPKLVDFD---SWKTILARSEKNPGTLGSQGAICI 534
LH ++ V LTE+ KLVDF + R GT I
Sbjct: 145 LHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVI 201
Query: 535 LPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCC 568
D + ++++ G+ +E+ G PP C
Sbjct: 202 ACDENPDATYDFKSDLWSLGITAIEMAEGAPPLC 235
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 7/141 (4%)
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP 485
+C + V +Y + G L H+ + +S R I GL++LH++
Sbjct: 84 FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS--RATFYAAEIILGLQFLHSK---G 138
Query: 486 FTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLD 545
+L + L +D K+ DF K + K G+ I P L + +
Sbjct: 139 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIA--PEILLGQKYN 196
Query: 546 VQGNIYAFGVLLLEIISGRPP 566
+ ++FGVLL E++ G+ P
Sbjct: 197 HSVDWWSFGVLLYEMLIGQSP 217
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 15/156 (9%)
Query: 473 RGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAI 532
+ L++LH+ ++ S + L D S KL DF I K +G+
Sbjct: 127 QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGT--PY 181
Query: 533 CILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVV 592
+ P + + + +I++ G++ +E+I G PP + + PE+
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQ---- 237
Query: 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
+PE + D +N C++ D+ KR S +EL
Sbjct: 238 NPEKLSAIFRDF------LNRCLDMDVEKRGSAKEL 267
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 7/141 (4%)
Query: 426 YCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP 485
+C + V +Y + G L H+ + +S R I GL++LH++
Sbjct: 85 FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS--RATFYAAEIILGLQFLHSK---G 139
Query: 486 FTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLD 545
+L + L +D K+ DF K + K G+ I P L + +
Sbjct: 140 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIA--PEILLGQKYN 197
Query: 546 VQGNIYAFGVLLLEIISGRPP 566
+ ++FGVLL E++ G+ P
Sbjct: 198 HSVDWWSFGVLLYEMLIGQSP 218
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 64/156 (41%), Gaps = 15/156 (9%)
Query: 473 RGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAI 532
+ L++LH+ ++ S + L D S KL DF I K +G+
Sbjct: 127 QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGT--PY 181
Query: 533 CILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVV 592
+ P + + + +I++ G++ +E+I G PP + + PE+
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQ---- 237
Query: 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
+PE + D +N C+ D+ KR S +EL
Sbjct: 238 NPEKLSAIFRDF------LNRCLEMDVEKRGSAKEL 267
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 470 GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQ 529
+ + L YLH + ++ S ++ LT D KL DF I K +G+
Sbjct: 149 AVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTP 205
Query: 530 GAIC--ILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKD 570
+ ++ SL A +D I++ G++++E++ G PP D
Sbjct: 206 YWMAPEVISRSLYATEVD----IWSLGIMVIEMVDGEPPYFSD 244
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 64/156 (41%), Gaps = 15/156 (9%)
Query: 473 RGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAI 532
+ L++LH+ ++ S + L D S KL DF I K +G+
Sbjct: 128 QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGT--PY 182
Query: 533 CILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVV 592
+ P + + + +I++ G++ +E+I G PP + + PE+
Sbjct: 183 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQ---- 238
Query: 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
+PE + D +N C+ D+ KR S +EL
Sbjct: 239 NPEKLSAIFRDF------LNRCLEMDVEKRGSAKEL 268
>pdb|2Y50|A Chain A, Crystal Structure Of Collagenase G From Clostridium
Histolyticum At 2.80 Angstrom Resolution
pdb|2Y6I|A Chain A, Crystal Structure Of Collagenase G From Clostridium
Histolyticum In Complex With
Isoamylphosphonyl-Gly-Pro-Ala At 3.25 Angstrom
Resolution
Length = 785
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 20/106 (18%)
Query: 141 LTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSG--YTANIHGMY 198
LT L+K N++ N + G G+ ++ D+NR+Q + A SG YTAN
Sbjct: 37 LTNLIK-NIKWNQINGLFNYSTGS----QKFFGDKNRVQAIINALQESGRTYTAN----- 86
Query: 199 ASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCL 244
++ G+ +++ A F++G L YL +FQ C+
Sbjct: 87 ----DMKGIETFTEVLRA----GFYLGYYNDGLSYLNDRNFQDKCI 124
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 70 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 175
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L A H + +I++ G ++ E+++GR
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IG V+K + + + + E G+ + RE+ L + HEN L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF-PITALREIKILQLLKHENVVNLIE 84
Query: 426 YCR-ESSPFTR-----MLVFDYASN---GTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
CR ++SP+ R LVFD+ + G L L + + + +++ + GL
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-----VKFTLSEIKRVMQMLLNGLY 139
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKLVDF 509
Y+H ++ ++ V +T D KL DF
Sbjct: 140 YIHRN---KILHRDMKAANVLITRDGVLKLADF 169
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IG V+K + + + + E G+ + RE+ L + HEN L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF-PITALREIKILQLLKHENVVNLIE 84
Query: 426 YCR-ESSPFTR-----MLVFDYASN---GTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
CR ++SP+ R LVFD+ + G L L + + + +++ + GL
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL-----VKFTLSEIKRVMQMLLNGLY 139
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKLVDF 509
Y+H ++ ++ V +T D KL DF
Sbjct: 140 YIHRN---KILHRDMKAANVLITRDGVLKLADF 169
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 63/156 (40%), Gaps = 15/156 (9%)
Query: 473 RGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAI 532
+ L++LH+ + S + L D S KL DF I K +G+
Sbjct: 128 QALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGT--PY 182
Query: 533 CILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVV 592
+ P + + + +I++ G++ +E+I G PP + + PE+
Sbjct: 183 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQ---- 238
Query: 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQEL 628
+PE + D +N C+ D+ KR S +EL
Sbjct: 239 NPEKLSAIFRDF------LNRCLEMDVEKRGSAKEL 268
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IG V+K + + + + E G+ + RE+ L + HEN L+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF-PITALREIKILQLLKHENVVNLIE 83
Query: 426 YCR-ESSPFTR-----MLVFDYASN---GTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
CR ++SP+ R LVFD+ + G L L + + + +++ + GL
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-----VKFTLSEIKRVMQMLLNGLY 138
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKLVDF 509
Y+H ++ ++ V +T D KL DF
Sbjct: 139 YIHRN---KILHRDMKAANVLITRDGVLKLADF 168
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 5/159 (3%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
FQRE+ L ++ + K G LV +Y +G L + L R ++ +R
Sbjct: 55 FQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQR-HRARLDASRL 113
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI-LARSEKNP 523
+ I +G++YL + +L + + + + K+ DF K + L +
Sbjct: 114 LLYSSQICKGMEYLGSRRC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVV 170
Query: 524 GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G P SL Q ++++FGV+L E+ +
Sbjct: 171 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 89/207 (42%), Gaps = 15/207 (7%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTG 421
F IGS LV+ G ++A+ + I+E E F E + +++H
Sbjct: 12 FVQEIGSGQFGLVHLGYWLNKDKVAIKT--IRE---GAMSEEDFIEEAEVMMKLSHPKLV 66
Query: 422 KLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE 481
+L G C E +P LV ++ +G L ++L +R + + + + + G+ YL
Sbjct: 67 QLYGVCLEQAPIC--LVTEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLEEA 123
Query: 482 LGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAI-CILPSSLE 540
+L + + E+ K+ DF + +L ++ + G++ + P
Sbjct: 124 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVL--DDQYTSSTGTKFPVKWASPEVFS 178
Query: 541 ARHLDVQGNIYAFGVLLLEIIS-GRPP 566
+ ++++FGVL+ E+ S G+ P
Sbjct: 179 FSRYSSKSDVWSFGVLMWEVFSEGKIP 205
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 105/295 (35%), Gaps = 36/295 (12%)
Query: 353 QELEVACE--DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVA 410
QE ++ E + +IG VY G G I +I + E F+REV
Sbjct: 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKA----FKREVM 81
Query: 411 DLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIG 470
+ HEN +G C SP ++ TLY + + + + +I
Sbjct: 82 AYRQTRHENVVLFMGAC--MSPPHLAIITSLCKGRTLYSVVR-DAKIVLDVNKTRQIAQE 138
Query: 471 IARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFD--SWKTILARSEKNPGTLGS 528
I +G+ YLH + +L S V+ ++ + DF S +L +
Sbjct: 139 IVKGMGYLHAK---GILHKDLKSKNVFY-DNGKVVITDFGLFSISGVLQAGRREDKLRIQ 194
Query: 529 QGAICIL---------PSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWA 578
G +C L P + E + +++A G + E+ + P + W
Sbjct: 195 NGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQ 254
Query: 579 KDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633
M + P L K I +++ C + +RP+ +L MLE
Sbjct: 255 ---------MGTGMKPNLSQIGMG--KEISDILLFCWAFEQEERPTFTKLMDMLE 298
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 366 IGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLG 425
IG V+K + + + + E G+ + RE+ L + HEN L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF-PITALREIKILQLLKHENVVNLIE 84
Query: 426 YCR-ESSPFTR-----MLVFDYASN---GTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
CR ++SP+ R LVFD+ + G L L + + + +++ + GL
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-----VKFTLSEIKRVMQMLLNGLY 139
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKLVDF 509
Y+H ++ ++ V +T D KL DF
Sbjct: 140 YIHRN---KILHRDMKAANVLITRDGVLKLADF 169
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 78/206 (37%), Gaps = 11/206 (5%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
D +G VY K I + + K + +E +RE+ + + H N
Sbjct: 18 DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNI 77
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
++ Y + ML ++A G LY+ L + + R + +A L Y H
Sbjct: 78 LRMYNYFHDRKRIYLML--EFAPRGELYKELQ--KHGRFDEQRSATFMEELADALHYCHE 133
Query: 481 ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLE 540
I N Y E K+ DF W ++ A S + G+ + P +E
Sbjct: 134 RKVIHRDIKPENLLMGYKGE---LKIADF-GW-SVHAPSLRRRXMCGTLDYLP--PEMIE 186
Query: 541 ARHLDVQGNIYAFGVLLLEIISGRPP 566
+ D + +++ GVL E + G PP
Sbjct: 187 GKTHDEKVDLWCAGVLCYEFLVGMPP 212
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 102/254 (40%), Gaps = 31/254 (12%)
Query: 333 EKDHIYID-SEILKDVV-RFSRQELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISL 390
+ ++ Y+D E D+ F R+ LE S G ++ Y G K G I V
Sbjct: 23 DNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAY-GISKTGVSIQVAVK 81
Query: 391 CIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYE 449
+KE+ + E E+ + ++ +HEN LLG C S P L+F+Y G L
Sbjct: 82 MLKEKADSSEREA-LMSELKMMTQLGSHENIVNLLGACTLSGPI--YLIFEYCCYGDLLN 138
Query: 450 HLHYG------ERCQVSWTRRMK---------------IVIGIARGLKYLHTELGPPFTI 488
+L + + +R++ +A+G+++L +
Sbjct: 139 YLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVH 195
Query: 489 SELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQG 548
+L + V +T K+ DF + I++ S + P SL ++
Sbjct: 196 RDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKS 255
Query: 549 NIYAFGVLLLEIIS 562
+++++G+LL EI S
Sbjct: 256 DVWSYGILLWEIFS 269
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 5/159 (3%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
FQRE+ L ++ + K G + LV +Y +G L + L R ++ +R
Sbjct: 59 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-HRARLDASRL 117
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI-LARSEKNP 523
+ I +G++YL + +L + + + + K+ DF K + L +
Sbjct: 118 LLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 174
Query: 524 GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
G P SL Q ++++FGV+L E+ +
Sbjct: 175 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 78/206 (37%), Gaps = 11/206 (5%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
D +G VY K I + + K + +E +RE+ + + H N
Sbjct: 17 DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNI 76
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
++ Y + ML ++A G LY+ L + + R + +A L Y H
Sbjct: 77 LRMYNYFHDRKRIYLML--EFAPRGELYKELQ--KHGRFDEQRSATFMEELADALHYCHE 132
Query: 481 ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLE 540
I N Y E K+ DF W ++ A S + G+ + P +E
Sbjct: 133 RKVIHRDIKPENLLMGYKGE---LKIADF-GW-SVHAPSLRRRXMCGTLDYLP--PEMIE 185
Query: 541 ARHLDVQGNIYAFGVLLLEIISGRPP 566
+ D + +++ GVL E + G PP
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 70/167 (41%), Gaps = 11/167 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
+RE+ +L H + KL Y S+P +V +Y S G L++++ R +RR
Sbjct: 63 IRREIQNLKLFRHPHIIKL--YQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRR 120
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ I G+ Y H + +L V L + K+ DF +++ E
Sbjct: 121 L--FQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADF-GLSNMMSDGEFLRX 174
Query: 525 TLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKD 570
+ GS P + R + + +I++ GV+L ++ G P D
Sbjct: 175 SCGSPNYAA--PEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD 219
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 17/165 (10%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
FQRE+ L ++ + K G + LV +Y +G L + L R ++ +R
Sbjct: 58 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-HRARLDASRL 116
Query: 465 MKIVIGIARGLKYL------HTELGPPFTISELNSSAVYLTEDFS-PKLVDFDSWKTILA 517
+ I +G++YL H +L + E S A DF KL+ D ++
Sbjct: 117 LLYSSQICKGMEYLGSRRCVHRDLAARNILVE--SEAHVKIADFGLAKLLPLDKDYYVVR 174
Query: 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
++P P SL Q ++++FGV+L E+ +
Sbjct: 175 EPGQSP-------IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 17/165 (10%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
FQRE+ L ++ + K G + LV +Y +G L + L R ++ +R
Sbjct: 71 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-HRARLDASRL 129
Query: 465 MKIVIGIARGLKYL------HTELGPPFTISELNSSAVYLTEDFS-PKLVDFDSWKTILA 517
+ I +G++YL H +L + E S A DF KL+ D ++
Sbjct: 130 LLYSSQICKGMEYLGSRRCVHRDLAARNILVE--SEAHVKIADFGLAKLLPLDKDYYVVR 187
Query: 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS 562
++P P SL Q ++++FGV+L E+ +
Sbjct: 188 EPGQSP-------IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 15/162 (9%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFD--YASNGTLYEHLHYGERCQVSWTRR 464
RE+ L + HEN ++G +P T + F+ Y + L+ +CQ
Sbjct: 99 RELRLLKHMKHEN---VIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 155
Query: 465 MKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNP 523
++ +I I RGLKY+H+ +L S + + ED K++DF LAR +
Sbjct: 156 VQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHTDDE 207
Query: 524 GTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
T P L H ++ +I++ G ++ E+++GR
Sbjct: 208 MTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495
V +Y + G L H+ + R I +A L YLH E G +L
Sbjct: 86 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLH-ERG--IIYRDLKLDN 140
Query: 496 VYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGV 555
V L + KL D+ K L + G+ I P L + +A GV
Sbjct: 141 VLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA--PEILRGEDYGFSVDWWALGV 198
Query: 556 LLLEIISGRPP 566
L+ E+++GR P
Sbjct: 199 LMFEMMAGRSP 209
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495
V +Y + G L H+ + R I +A L YLH E G +L
Sbjct: 97 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLH-ERG--IIYRDLKLDN 151
Query: 496 VYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGV 555
V L + KL D+ K L + G+ I P L + +A GV
Sbjct: 152 VLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA--PEILRGEDYGFSVDWWALGV 209
Query: 556 LLLEIISGRPP 566
L+ E+++GR P
Sbjct: 210 LMFEMMAGRSP 220
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495
V +Y + G L H+ + R I +A L YLH E G +L
Sbjct: 129 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLH-ERG--IIYRDLKLDN 183
Query: 496 VYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGV 555
V L + KL D+ K L + G+ I P L + +A GV
Sbjct: 184 VLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIA--PEILRGEDYGFSVDWWALGV 241
Query: 556 LLLEIISGRPP 566
L+ E+++GR P
Sbjct: 242 LMFEMMAGRSP 252
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 79/210 (37%), Gaps = 19/210 (9%)
Query: 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT 420
D +G VY K I + + K + +E +RE+ + + H N
Sbjct: 17 DIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNI 76
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLH----YGERCQVSWTRRMKIVIGIARGLK 476
++ Y + ML ++A G LY+ L + E+ ++ + + K
Sbjct: 77 LRMYNYFHDRKRIYLML--EFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILP 536
+H ++ P + K+ DF W ++ A S + G+ + P
Sbjct: 135 VIHRDIKPENLLMGYKGEL---------KIADF-GW-SVHAPSLRRRXMCGTLDYLP--P 181
Query: 537 SSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
+E + D + +++ GVL E + G PP
Sbjct: 182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/135 (19%), Positives = 63/135 (46%), Gaps = 13/135 (9%)
Query: 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAV 496
++ ++ + G+L + L E + + + IA G+ ++ + +L ++ +
Sbjct: 86 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANI 142
Query: 497 YLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICIL----PSSLEARHLDVQGNIYA 552
++ K+ DF LAR ++ +GA + P ++ ++ ++++
Sbjct: 143 LVSASLVCKIADFG-----LARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWS 197
Query: 553 FGVLLLEIIS-GRPP 566
FG+LL+EI++ GR P
Sbjct: 198 FGILLMEIVTYGRIP 212
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495
V +Y + G L H+ + R I +A L YLH E G +L
Sbjct: 82 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLH-ERG--IIYRDLKLDN 136
Query: 496 VYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGV 555
V L + KL D+ K L + G+ I P L + +A GV
Sbjct: 137 VLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA--PEILRGEDYGFSVDWWALGV 194
Query: 556 LLLEIISGRPP 566
L+ E+++GR P
Sbjct: 195 LMFEMMAGRSP 205
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/135 (19%), Positives = 63/135 (46%), Gaps = 13/135 (9%)
Query: 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAV 496
++ ++ + G+L + L E + + + IA G+ ++ + +L ++ +
Sbjct: 259 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANI 315
Query: 497 YLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICIL----PSSLEARHLDVQGNIYA 552
++ K+ DF LAR ++ +GA + P ++ ++ ++++
Sbjct: 316 LVSASLVCKIADFG-----LARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWS 370
Query: 553 FGVLLLEIIS-GRPP 566
FG+LL+EI++ GR P
Sbjct: 371 FGILLMEIVTYGRIP 385
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 61/153 (39%), Gaps = 12/153 (7%)
Query: 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAV 496
LVF+ G++ H+H +R + +V +A L +LH + + N
Sbjct: 88 LVFEKMRGGSILSHIH--KRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCE 145
Query: 497 YLTEDFSPKLVDFDSWKTILARSEKNP----------GTLGSQGAICILPSSLEARHLDV 546
+ + K+ DFD I + +P G+ + S EA D
Sbjct: 146 HPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDK 205
Query: 547 QGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK 579
+ ++++ GV+L ++SG PP G+ W +
Sbjct: 206 RCDLWSLGVILYILLSGYPPFVGRCGSDCGWDR 238
>pdb|2Y3U|A Chain A, Crystal Structure Of Apo Collagenase G From Clostridium
Histolyticum At 2.55 Angstrom Resolution
Length = 785
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 20/106 (18%)
Query: 141 LTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSG--YTANIHGMY 198
LT L+K N++ N + G G+ ++ D+NR+Q + A SG YTAN
Sbjct: 37 LTNLIK-NIKWNQINGLFNYSTGS----QKFFGDKNRVQAIINALQESGRTYTAN----- 86
Query: 199 ASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCL 244
+ G+ +++ A F++G L YL +FQ C+
Sbjct: 87 ----DXKGIETFTEVLRA----GFYLGYYNDGLSYLNDRNFQDKCI 124
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 93/247 (37%), Gaps = 39/247 (15%)
Query: 408 EVADLARINHENTGKLLGYCRESSPFTR-----------MLVFDYASNGTLYEHLHYGER 456
EV LA +NH+ + E F + + +Y N TLY+ +H E
Sbjct: 52 EVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIH-SEN 110
Query: 457 CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT-- 514
++ I L Y+H++ +L +++ E + K+ DF K
Sbjct: 111 LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVH 167
Query: 515 ----ILARSEKN-PG-----TLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISG 563
IL +N PG T A+ + L+ H + + ++Y+ G++ E+I
Sbjct: 168 RSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP 227
Query: 564 RPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRP 623
+ L +E P P+ F + +KV +++ L ++ D KRP
Sbjct: 228 FSTGMERVNILKKLRSVSIEFP--------PD---FDDNKMKVEKKIIRLLIDHDPNKRP 276
Query: 624 SMQELCT 630
+ L
Sbjct: 277 GARTLLN 283
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 75 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 129 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFG-----LARHT 180
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 70 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 175
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 176 DDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 71/164 (43%), Gaps = 10/164 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
++E+ A +NHEN K G+ RE + + L +Y S G L++ + +
Sbjct: 52 IKKEICINAMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE--PDIGMPEPDA 107
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + G+ YLH G T ++ + L E + K+ DF T+ + +
Sbjct: 108 QRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF-GLATVFRYNNRERL 163
Query: 525 TLGSQGAI-CILPSSLEARHLDVQG-NIYAFGVLLLEIISGRPP 566
G + + P L+ R + ++++ G++L +++G P
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 81 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 134
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 135 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFG-----LARHT 186
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 187 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 75 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 129 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFG-----LARHT 180
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 70 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF-----YLARHT 175
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 24/162 (14%)
Query: 416 NHENTGKLLGYC-RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVI----- 469
+H N LLG C + P M++ ++ G L +L V + K +
Sbjct: 89 HHLNVVNLLGACTKPGGPL--MVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 470 -----GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+A+G+++L + +L + + L+E K+ DF + I K+P
Sbjct: 147 IXYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIY----KDPD 199
Query: 525 TLGSQGAICIL----PSSLEARHLDVQGNIYAFGVLLLEIIS 562
+ A L P ++ R +Q ++++FGVLL EI S
Sbjct: 200 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 72 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 125
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 126 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 177
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 70 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 175
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FOT|A Chain A, Structural And Functional Characterization Of Tri3
Trichothecene 15-O- Acetyltransferase From Fusarium
Sporotrichioides
pdb|3FP0|A Chain A, Structural And Functional Characterization Of Tri3
Trichothecene 15-O-Acetyltransferase From Fusarium
Sporotrichioides
Length = 519
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 53/129 (41%), Gaps = 31/129 (24%)
Query: 431 SPFTRMLVFDYASNGTLYEHLHYGERC---QVSWTRRMKIVIGIARGLKYLHTELGPPFT 487
+ +T LV +Y S G ++ RC ++S + IV K + T LGP FT
Sbjct: 253 TEYTSALVANYKSRGMKFQPGLALPRCVIHKLSADESIDIV-------KAVKTRLGPGFT 305
Query: 488 ISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHL--- 544
IS L +A+ L L+D P L S + I P+S++ R
Sbjct: 306 ISHLTQAAIVLA------LLD-----------HLKPNDL-SDDEVFISPTSVDGRRWLRE 347
Query: 545 DVQGNIYAF 553
D+ N YA
Sbjct: 348 DIASNFYAM 356
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 72 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 125
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 126 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFG-----LARHT 177
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 70 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 175
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 70 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 175
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 75 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 129 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 180
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 81 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 134
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 135 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 186
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 187 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 72 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 125
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 126 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 177
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 75 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 129 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 180
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 69 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 122
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 123 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 174
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 175 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 70 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 175
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 82 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 135
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 136 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 187
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 188 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 76 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 129
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 130 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFG-----LARHT 181
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 76 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 129
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 130 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 181
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 72 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 125
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 126 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 177
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 70 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 175
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 77 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 131 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 182
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 183 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 82 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 135
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 136 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 187
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 188 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 67 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 120
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 121 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 172
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 173 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 82 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 135
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 136 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 187
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 188 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 67 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 120
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 121 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 172
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 173 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 70 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 175
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 70 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 175
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 90 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 143
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 144 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 195
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 196 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 89 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 142
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 143 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 194
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 195 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 70 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 124 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 175
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 11/162 (6%)
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRM 465
+RE+ +L H + KL Y S+P +V +Y S G L++++ R + RR+
Sbjct: 59 KREIQNLKLFRHPHIIKL--YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRL 116
Query: 466 KIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGT 525
I + Y H + +L V L + K+ DF +++ E +
Sbjct: 117 --FQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADF-GLSNMMSDGEFLRDS 170
Query: 526 LGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPP 566
GS P + R + + +I++ GV+L ++ G P
Sbjct: 171 CGSPNYAA--PEVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 93 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 146
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 147 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 198
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 199 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 77 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 131 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 182
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 66 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 119
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 120 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 171
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 172 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 80 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 133
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 134 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 185
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 186 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 68 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 121
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 122 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 173
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 174 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 66 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 119
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 120 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 171
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 172 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 89 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 142
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 143 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 194
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 195 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 90 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 143
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 144 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 195
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 196 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 77 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 131 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 182
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 77 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 131 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 182
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 76 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 129
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 130 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 181
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 21/165 (12%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-----RCQVSW 461
RE+ L + HEN LL FT + ++ L HL + +CQ
Sbjct: 76 RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 129
Query: 462 TRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520
++ +I I RGLKY+H+ +L S + + ED K++DF LAR
Sbjct: 130 DDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG-----LARHT 181
Query: 521 KNPGTLGSQGAICILPS-SLEARHLDVQGNIYAFGVLLLEIISGR 564
+ T P L H + +I++ G ++ E+++GR
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176
N LT +P EI NL+ L ++L N LT LPAELG+ L+ + N
Sbjct: 257 NSLTE-LPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFDN 303
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 144 LVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184
L ++ L N LT LPAE+ NL +L L L NRL ++PA
Sbjct: 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRL-TSLPA 287
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 104/247 (42%), Gaps = 36/247 (14%)
Query: 335 DHIYIDSEILKDVVRFSRQELEVAC----EDFSNI--IGSSP-DSLVYKGTMKGGPEIAV 387
+++Y S ++ F RQEL E + N+ +GS S+ K G +AV
Sbjct: 16 ENLYFQSNASQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAV 75
Query: 388 ISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTL 447
L + Y RE+ L + HEN LL FT + ++ L
Sbjct: 76 KKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLLDV------FTPARSLEEFNDVYL 127
Query: 448 YEHLHYGE-----RCQVSWTRRMKIVI-GIARGLKYLHTELGPPFTISELNSSAVYLTED 501
HL + +CQ ++ +I I RGLKY+H+ +L S + + ED
Sbjct: 128 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 184
Query: 502 FSPKLVDFDSWKTILAR--SEKNPGTLGSQ--GAICILPSSLEARHLDVQGNIYAFGVLL 557
K++DF LAR ++ G + ++ A I+ L H + +I++ G ++
Sbjct: 185 CELKILDFG-----LARHTDDEMXGYVATRWYRAPEIM---LNWMHYNQTVDIWSVGCIM 236
Query: 558 LEIISGR 564
E+++GR
Sbjct: 237 AELLTGR 243
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Query: 408 EVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLY----EHLHYGERCQVSWTR 463
E+A L+R+ H N K+L E+ F ++++ + S L+ H E R
Sbjct: 79 EIAILSRVEHANIIKVLDIF-ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFR 137
Query: 464 RMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDS 511
++ +G R +H ++ + + EDF+ KL+DF S
Sbjct: 138 QLVSAVGYLRLKDIIH---------RDIKDENIVIAEDFTIKLIDFGS 176
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 11/162 (6%)
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRM 465
+RE+ +L H + KL Y S+P +V +Y S G L++++ R + RR+
Sbjct: 59 KREIQNLKLFRHPHIIKL--YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRL 116
Query: 466 KIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGT 525
I + Y H + +L V L + K+ DF +++ E +
Sbjct: 117 --FQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADF-GLSNMMSDGEFLRTS 170
Query: 526 LGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPP 566
GS P + R + + +I++ GV+L ++ G P
Sbjct: 171 CGSPNYAA--PEVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
++E+ +NHEN K G+ RE + + L +Y S G L++ + +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE--PDIGMPEPDA 106
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + G+ YLH G T ++ + L E + K+ DF T+ + +
Sbjct: 107 QRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF-GLATVFRYNNRERL 162
Query: 525 TLGSQGAI-CILPSSLEARHLDVQG-NIYAFGVLLLEIISGRPP 566
G + + P L+ R + ++++ G++L +++G P
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 23/211 (10%)
Query: 366 IGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWT----GYLELYFQREVADLARINHENT 420
+GS ++V K KG G E A + IK+ + G +REV L I H N
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYA--AKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 77
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
L + +L+ + S G L++ L E+ ++ + + I G+ YLH+
Sbjct: 78 ITLHDIFENKTDV--VLILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVHYLHS 133
Query: 481 ELGPPFTISELNSSAVYLTEDFSP----KLVDFDSWKTILARSE-KNPGTLGSQGAICIL 535
+ F +L + L + P KL+DF I A +E KN G+ +
Sbjct: 134 KRIAHF---DLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--IFGTPEFVA-- 186
Query: 536 PSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
P + L ++ ++++ GV+ ++SG P
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 23/211 (10%)
Query: 366 IGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWT----GYLELYFQREVADLARINHENT 420
+GS ++V K KG G E A + IK+ + G +REV L I H N
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYA--AKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 70
Query: 421 GKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT 480
L + +L+ + S G L++ L E+ ++ + + I G+ YLH+
Sbjct: 71 ITLHDIFENKTDV--VLILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVHYLHS 126
Query: 481 ELGPPFTISELNSSAVYLTEDFSP----KLVDFDSWKTILARSE-KNPGTLGSQGAICIL 535
+ F +L + L + P KL+DF I A +E KN G+ +
Sbjct: 127 KRIAHF---DLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--IFGTPEFVA-- 179
Query: 536 PSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
P + L ++ ++++ GV+ ++SG P
Sbjct: 180 PEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 360 EDFSNIIGSSPDSL---VYKGTMKGGPEIA---VISLCIKEEHWTGYLELYFQREVADLA 413
EDF IIG D VYK K +A VI +EE LE Y E+ LA
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE-----LEDYMV-EIDILA 89
Query: 414 RINHENTGKLL-GYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIA 472
+H N KLL + E++ + ++ ++ + G + + ER ++ ++ +
Sbjct: 90 SCDHPNIVKLLDAFYYENNLW---ILIEFCAGGAVDAVMLELER-PLTESQIQVVCKQTL 145
Query: 473 RGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDF----DSWKTILARSEKNPGTLGS 528
L YLH +L + + T D KL DF + +TI R + GT
Sbjct: 146 DALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-QRRDSFIGTPYW 201
Query: 529 QGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
++ + + R D + ++++ G+ L+E+ PP
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
++E+ +NHEN K G+ RE + + L +Y S G L++ + +
Sbjct: 52 IKKEIXINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE--PDIGMPEPDA 107
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + G+ YLH G T ++ + L E + K+ DF T+ + +
Sbjct: 108 QRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF-GLATVFRYNNRERL 163
Query: 525 TLGSQGAI-CILPSSLEARHLDVQG-NIYAFGVLLLEIISGRPP 566
G + + P L+ R + ++++ G++L +++G P
Sbjct: 164 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
++E+ +NHEN K G+ RE + + L +Y S G L++ + +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE--PDIGMPEPDA 106
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + G+ YLH G T ++ + L E + K+ DF T+ + +
Sbjct: 107 QRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF-GLATVFRYNNRERL 162
Query: 525 TLGSQGAI-CILPSSLEARHLDVQG-NIYAFGVLLLEIISGRPP 566
G + + P L+ R + ++++ G++L +++G P
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
++E+ +NHEN K G+ RE + + L +Y S G L++ + +
Sbjct: 51 IKKEIXINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE--PDIGMPEPDA 106
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + G+ YLH G T ++ + L E + K+ DF T+ + +
Sbjct: 107 QRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF-GLATVFRYNNRERL 162
Query: 525 TLGSQGAI-CILPSSLEARHLDVQG-NIYAFGVLLLEIISGRPP 566
G + + P L+ R + ++++ G++L +++G P
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
++E+ +NHEN K G+ RE + + L +Y S G L++ + +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE--PDIGMPEPDA 106
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + G+ YLH G T ++ + L E + K+ DF T+ + +
Sbjct: 107 QRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF-GLATVFRYNNRERL 162
Query: 525 TLGSQGAI-CILPSSLEARHLDVQG-NIYAFGVLLLEIISGRPP 566
G + + P L+ R + ++++ G++L +++G P
Sbjct: 163 LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 23/217 (10%)
Query: 360 EDFSNIIGSSPDSL---VYKGTMKGGPEIA---VISLCIKEEHWTGYLELYFQREVADLA 413
EDF IIG D VYK K +A VI +EE LE Y E+ LA
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE-----LEDYMV-EIDILA 89
Query: 414 RINHENTGKLL-GYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIA 472
+H N KLL + E++ + ++ ++ + G + + ER ++ ++ +
Sbjct: 90 SCDHPNIVKLLDAFYYENNLW---ILIEFCAGGAVDAVMLELER-PLTESQIQVVCKQTL 145
Query: 473 RGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFD-SWKTI--LARSEKNPGTLGSQ 529
L YLH +L + + T D KL DF S K + R + GT
Sbjct: 146 DALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWM 202
Query: 530 GAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
++ + + R D + ++++ G+ L+E+ PP
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 16/166 (9%)
Query: 406 QREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRM 465
+REV L I H N L + +L+ + S G L++ L E+ ++
Sbjct: 77 EREVNILREIRHPNIITLHDIFENKTDV--VLILELVSGGELFDFL--AEKESLTEDEAT 132
Query: 466 KIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP----KLVDFDSWKTILARSE- 520
+ + I G+ YLH++ F +L + L + P KL+DF I A +E
Sbjct: 133 QFLKQILDGVHYLHSKRIAHF---DLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 189
Query: 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
KN G+ + P + L ++ ++++ GV+ ++SG P
Sbjct: 190 KN--IFGTPEFVA--PEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 22/223 (9%)
Query: 359 CEDFSNI---IGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWT--GYLELYFQREVADL 412
EDF +I +GS ++V K K G E A + ++ + G +REV+ L
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 413 ARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIA 472
++ H N L + +L+ + S G L++ L ++ +S + I
Sbjct: 70 RQVLHHNVITLHDVYENRTDV--VLILELVSGGELFDFL--AQKESLSEEEATSFIKQIL 125
Query: 473 RGLKYLHTELGPPFTISELNSSAVYLTEDFSP----KLVDFDSWKTILARSE-KNPGTLG 527
G+ YLHT+ F +L + L + P KL+DF I E KN G
Sbjct: 126 DGVNYLHTKKIAHF---DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFG 180
Query: 528 SQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKD 570
+ + P + L ++ ++++ GV+ ++SG P D
Sbjct: 181 TPEFVA--PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 23/217 (10%)
Query: 360 EDFSNIIGSSPDSL---VYKGTMKGGPEIA---VISLCIKEEHWTGYLELYFQREVADLA 413
EDF IIG D VYK K +A VI +EE LE Y E+ LA
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE-----LEDYMV-EIDILA 89
Query: 414 RINHENTGKLL-GYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIA 472
+H N KLL + E++ + ++ ++ + G + + ER ++ ++ +
Sbjct: 90 SCDHPNIVKLLDAFYYENNLW---ILIEFCAGGAVDAVMLELER-PLTESQIQVVCKQTL 145
Query: 473 RGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFD-SWKTI--LARSEKNPGTLGSQ 529
L YLH +L + + T D KL DF S K + R + GT
Sbjct: 146 DALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWM 202
Query: 530 GAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
++ + + R D + ++++ G+ L+E+ PP
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
++E+ +NHEN K G+ RE + + L +Y S G L++ + +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE--PDIGMPEPDA 106
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + G+ YLH G T ++ + L E + K+ DF T+ + +
Sbjct: 107 QRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF-GLATVFRYNNRERL 162
Query: 525 TLGSQGAI-CILPSSLEARHLDVQG-NIYAFGVLLLEIISGRPP 566
G + + P L+ R + ++++ G++L +++G P
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
++E+ +NHEN K G+ RE + + L +Y S G L++ + +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE--PDIGMPEPDA 106
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + G+ YLH G T ++ + L E + K+ DF T+ + +
Sbjct: 107 QRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF-GLATVFRYNNRERL 162
Query: 525 TLGSQGAI-CILPSSLEARHLDVQG-NIYAFGVLLLEIISGRPP 566
G + + P L+ R + ++++ G++L +++G P
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
++E+ +NHEN K G+ RE + + L +Y S G L++ + +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE--PDIGMPEPDA 106
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + G+ YLH G T ++ + L E + K+ DF T+ + +
Sbjct: 107 QRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF-GLATVFRYNNRERL 162
Query: 525 TLGSQGAI-CILPSSLEARHLDVQG-NIYAFGVLLLEIISGRPP 566
G + + P L+ R + ++++ G++L +++G P
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
++E+ +NHEN K G+ RE + + L +Y S G L++ + +
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE--PDIGMPEPDA 107
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + G+ YLH G T ++ + L E + K+ DF T+ + +
Sbjct: 108 QRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF-GLATVFRYNNRERL 163
Query: 525 TLGSQGAI-CILPSSLEARHLDVQG-NIYAFGVLLLEIISGRPP 566
G + + P L+ R + ++++ G++L +++G P
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
++E+ +NHEN K G+ RE + + L +Y S G L++ + +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE--PDIGMPEPDA 106
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + G+ YLH G T ++ + L E + K+ DF T+ + +
Sbjct: 107 QRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF-GLATVFRYNNRERL 162
Query: 525 TLGSQGAI-CILPSSLEARHLDVQG-NIYAFGVLLLEIISGRPP 566
G + + P L+ R + ++++ G++L +++G P
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1HWM|B Chain B, Ebulin,Orthorhombic Crystal Form Model
pdb|1HWN|B Chain B, Ebulin Complexed With Galactose, Trigonal Crystal Form
pdb|1HWO|B Chain B, Ebulin Complexed With Lactose, Trigonal Crystal Form
pdb|1HWP|B Chain B, Ebulin Complexed With Pteroic Acid, Trigonal Crystal Form
Length = 266
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 50/136 (36%), Gaps = 24/136 (17%)
Query: 427 CRESSPFTRMLV----------FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK 476
C +PFTR +V Y ++GT + G + WT I
Sbjct: 5 CAIPAPFTRRIVGRDGLCVDVRNGYDTDGTPIQLWPCGTQRNQQWTFYNDKTI------- 57
Query: 477 YLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILP 536
+G T + LNS + + D S D W+ ++ S NP S G + P
Sbjct: 58 ---RSMGKCMTANGLNSGSYIMITDCSTAAEDATKWEVLIDGSIINP----SSGLVMTAP 110
Query: 537 SSLEARHLDVQGNIYA 552
S L ++ NI+A
Sbjct: 111 SGASRTTLLLENNIHA 126
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 22/223 (9%)
Query: 359 CEDFSNI---IGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWT--GYLELYFQREVADL 412
EDF +I +GS ++V K K G E A + ++ + G +REV+ L
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 413 ARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIA 472
++ H N L + +L+ + S G L++ L ++ +S + I
Sbjct: 70 RQVLHHNVITLHDVYENRTDV--VLILELVSGGELFDFL--AQKESLSEEEATSFIKQIL 125
Query: 473 RGLKYLHTELGPPFTISELNSSAVYLTEDFSP----KLVDFDSWKTILARSE-KNPGTLG 527
G+ YLHT+ F +L + L + P KL+DF I E KN G
Sbjct: 126 DGVNYLHTKKIAHF---DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFG 180
Query: 528 SQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKD 570
+ + P + L ++ ++++ GV+ ++SG P D
Sbjct: 181 TPEFVA--PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 22/223 (9%)
Query: 359 CEDFSNI---IGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWT--GYLELYFQREVADL 412
EDF +I +GS ++V K K G E A + ++ + G +REV+ L
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 413 ARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIA 472
++ H N L + +L+ + S G L++ L ++ +S + I
Sbjct: 70 RQVLHHNVITLHDVYENRTDV--VLILELVSGGELFDFL--AQKESLSEEEATSFIKQIL 125
Query: 473 RGLKYLHTELGPPFTISELNSSAVYLTEDFSP----KLVDFDSWKTILARSE-KNPGTLG 527
G+ YLHT+ F +L + L + P KL+DF I E KN G
Sbjct: 126 DGVNYLHTKKIAHF---DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFG 180
Query: 528 SQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKD 570
+ + P + L ++ ++++ GV+ ++SG P D
Sbjct: 181 TPEFVA--PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
++E+ +NHEN K G+ RE + + L +Y S G L++ + +
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE--PDIGMPEPDA 107
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + G+ YLH G T ++ + L E + K+ DF T+ + +
Sbjct: 108 QRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF-GLATVFRYNNRERL 163
Query: 525 TLGSQGAI-CILPSSLEARHLDVQG-NIYAFGVLLLEIISGRPP 566
G + + P L+ R + ++++ G++L +++G P
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
++E+ +NHEN K G+ RE + + L +Y S G L++ + +
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE--PDIGMPEPDA 107
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + G+ YLH G T ++ + L E + K+ DF T+ + +
Sbjct: 108 QRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF-GLATVFRYNNRERL 163
Query: 525 TLGSQGAI-CILPSSLEARHLDVQG-NIYAFGVLLLEIISGRPP 566
G + + P L+ R + ++++ G++L +++G P
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
++E+ +NHEN K G+ RE + + L +Y S G L++ + +
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE--PDIGMPEPDA 107
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + G+ YLH G T ++ + L E + K+ DF T+ + +
Sbjct: 108 QRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF-GLATVFRYNNRERL 163
Query: 525 TLGSQGAI-CILPSSLEARHLDVQG-NIYAFGVLLLEIISGRPP 566
G + + P L+ R + ++++ G++L +++G P
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
++E+ +NHEN K G+ RE + + L +Y S G L++ + +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE--PDIGMPEPDA 106
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + G+ YLH G T ++ + L E + K+ DF T+ + +
Sbjct: 107 QRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF-GLATVFRYNNRERL 162
Query: 525 TLGSQGAI-CILPSSLEARHLDVQG-NIYAFGVLLLEIISGRPP 566
G + + P L+ R + ++++ G++L +++G P
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
++E+ +NHEN K G+ RE + + L +Y S G L++ + +
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE--PDIGMPEPDA 107
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + G+ YLH G T ++ + L E + K+ DF T+ + +
Sbjct: 108 QRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF-GLATVFRYNNRERL 163
Query: 525 TLGSQGAI-CILPSSLEARHLDVQG-NIYAFGVLLLEIISGRPP 566
G + + P L+ R + ++++ G++L +++G P
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 12/153 (7%)
Query: 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAV 496
LVF+ G++ H+H +R + +V +A L +LH + + N
Sbjct: 88 LVFEKMRGGSILSHIH--KRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCE 145
Query: 497 YLTEDFSPKLVDFDSWKTILARSEKNP----------GTLGSQGAICILPSSLEARHLDV 546
+ + K+ DF I + +P G+ + S EA D
Sbjct: 146 HPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDK 205
Query: 547 QGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK 579
+ ++++ GV+L ++SG PP G+ W +
Sbjct: 206 RCDLWSLGVILYILLSGYPPFVGRCGSDCGWDR 238
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
++E+ +NHEN K G+ RE + + L +Y S G L++ + +
Sbjct: 50 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE--PDIGMPEPDA 105
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + G+ YLH G T ++ + L E + K+ DF T+ + +
Sbjct: 106 QRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF-GLATVFRYNNRERL 161
Query: 525 TLGSQGAI-CILPSSLEARHLDVQG-NIYAFGVLLLEIISGRPP 566
G + + P L+ R + ++++ G++L +++G P
Sbjct: 162 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 22/223 (9%)
Query: 359 CEDFSNI---IGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWT--GYLELYFQREVADL 412
EDF +I +GS ++V K K G E A + ++ + G +REV+ L
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 413 ARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIA 472
++ H N L + +L+ + S G L++ L ++ +S + I
Sbjct: 70 RQVLHHNVITLHDVYENRTDV--VLILELVSGGELFDFL--AQKESLSEEEATSFIKQIL 125
Query: 473 RGLKYLHTELGPPFTISELNSSAVYLTEDFSP----KLVDFDSWKTILARSE-KNPGTLG 527
G+ YLHT+ F +L + L + P KL+DF I E KN G
Sbjct: 126 DGVNYLHTKKIAHF---DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFG 180
Query: 528 SQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKD 570
+ + P + L ++ ++++ GV+ ++SG P D
Sbjct: 181 TPEFVA--PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 22/223 (9%)
Query: 359 CEDFSNI---IGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWT--GYLELYFQREVADL 412
EDF +I +GS ++V K K G E A + ++ + G +REV+ L
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 413 ARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIA 472
++ H N L + +L+ + S G L++ L ++ +S + I
Sbjct: 70 RQVLHHNVITLHDVYENRTDV--VLILELVSGGELFDFL--AQKESLSEEEATSFIKQIL 125
Query: 473 RGLKYLHTELGPPFTISELNSSAVYLTEDFSP----KLVDFDSWKTILARSE-KNPGTLG 527
G+ YLHT+ F +L + L + P KL+DF I E KN G
Sbjct: 126 DGVNYLHTKKIAHF---DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFG 180
Query: 528 SQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKD 570
+ + P + L ++ ++++ GV+ ++SG P D
Sbjct: 181 TPEFVA--PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
++E+ +NHEN K G+ RE + + L +Y S G L++ + +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE--PDIGMPEPDA 106
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + G+ YLH G T ++ + L E + K+ DF T+ + +
Sbjct: 107 QRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF-GLATVFRYNNRERL 162
Query: 525 TLGSQGAI-CILPSSLEARHLDVQG-NIYAFGVLLLEIISGRPP 566
G + + P L+ R + ++++ G++L +++G P
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
++E+ +NHEN K G+ RE + + L +Y S G L++ + +
Sbjct: 51 IKKEIXINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE--PDIGMPEPDA 106
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + G+ YLH G T ++ + L E + K+ DF T+ + +
Sbjct: 107 QRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF-GLATVFRYNNRERL 162
Query: 525 TLGSQGAI-CILPSSLEARHLDVQG-NIYAFGVLLLEIISGRPP 566
G + + P L+ R + ++++ G++L +++G P
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLY 448
RE L ++NH+N KL E++ ++L+ ++ G+LY
Sbjct: 56 REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLY 97
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELY--FQREVADLARINHEN 419
S+I+G + V++G K ++ IK + +L RE L ++NH+N
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDL----FAIKVFNNISFLRPVDVQMREFEVLKKLNHKN 68
Query: 420 TGKLLGYCRESSPFTRMLVFDYASNGTLY 448
KL E++ ++L+ ++ G+LY
Sbjct: 69 IVKLFAIEEETTTRHKVLIMEFCPCGSLY 97
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 28/197 (14%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFD--YASNGTLYEHLHYGERCQVSWTRR 464
RE+ L + HEN ++G +P T + F Y + L+ +CQ
Sbjct: 76 RELRLLKHLKHEN---VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEH 132
Query: 465 MK-IVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS--EK 521
++ +V + RGLKY+H+ +L S V + ED +++DF LAR E+
Sbjct: 133 VQFLVYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFG-----LARQADEE 184
Query: 522 NPGTLGSQ--GAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK 579
G + ++ A I+ L H + +I++ G ++ E++ G+ + +D K
Sbjct: 185 MTGYVATRWYRAPEIM---LNWMHYNQTVDIWSVGCIMAELLQGK--ALFPGSDYIDQLK 239
Query: 580 DYLEL-----PEVMSYV 591
+E+ PEV++ +
Sbjct: 240 RIMEVVGTPSPEVLAKI 256
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
++E+ +NHEN K G+ RE + + L +Y S G L++ + +
Sbjct: 52 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE--PDIGMPEPDA 107
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + G+ YLH G T ++ + L E + K+ DF T+ + +
Sbjct: 108 QRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF-GLATVFRYNNRERL 163
Query: 525 TLGSQGAI-CILPSSLEARHLDVQG-NIYAFGVLLLEIISGRPP 566
G + + P L+ R + ++++ G++L +++G P
Sbjct: 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRR 464
++E+ +NHEN K G+ RE + + L +Y S G L++ + +
Sbjct: 51 IKKEICINKMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE--PDIGMPEPDA 106
Query: 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524
+ + G+ YLH G T ++ + L E + K+ DF T+ + +
Sbjct: 107 QRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF-GLATVFRYNNRERL 162
Query: 525 TLGSQGAI-CILPSSLEARHLDVQG-NIYAFGVLLLEIISGRPP 566
G + + P L+ R + ++++ G++L +++G P
Sbjct: 163 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 65/168 (38%), Gaps = 19/168 (11%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL----HYGERCQVS 460
+RE ++ H N +L +E S LVFD + G L+E + Y E
Sbjct: 52 LEREARICRKLQHPNIVRLHDSIQEES--FHYLVFDLVTGGELFEDIVAREFYSEADASH 109
Query: 461 WTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518
+++ I +H L P S+ +AV KL DF +
Sbjct: 110 CIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAV--------KLADF-GLAIEVND 160
Query: 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
SE G G+ G + P L+ +I+A GV+L ++ G PP
Sbjct: 161 SEAWHGFAGTPGYLS--PEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 28/197 (14%)
Query: 407 REVADLARINHENTGKLLGYCRESSPFTRMLVFD--YASNGTLYEHLHYGERCQVSWTRR 464
RE+ L + HEN ++G +P T + F Y + L+ +CQ
Sbjct: 68 RELRLLKHLKHEN---VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEH 124
Query: 465 MK-IVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS--EK 521
++ +V + RGLKY+H+ +L S V + ED +++DF LAR E+
Sbjct: 125 VQFLVYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFG-----LARQADEE 176
Query: 522 NPGTLGSQ--GAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK 579
G + ++ A I+ L H + +I++ G ++ E++ G+ + +D K
Sbjct: 177 MTGYVATRWYRAPEIM---LNWMHYNQTVDIWSVGCIMAELLQGK--ALFPGSDYIDQLK 231
Query: 580 DYLEL-----PEVMSYV 591
+E+ PEV++ +
Sbjct: 232 RIMEVVGTPSPEVLAKI 248
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 65/168 (38%), Gaps = 19/168 (11%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL----HYGERCQVS 460
+RE ++ H N +L +E S LVFD + G L+E + Y E
Sbjct: 51 LEREARICRKLQHPNIVRLHDSIQEES--FHYLVFDLVTGGELFEDIVAREFYSEADASH 108
Query: 461 WTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518
+++ I +H L P S+ +AV KL DF +
Sbjct: 109 CIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAV--------KLADF-GLAIEVND 159
Query: 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
SE G G+ G + P L+ +I+A GV+L ++ G PP
Sbjct: 160 SEAWHGFAGTPGYLS--PEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 65/168 (38%), Gaps = 19/168 (11%)
Query: 405 FQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHL----HYGERCQVS 460
+RE ++ H N +L +E S LVFD + G L+E + Y E
Sbjct: 52 LEREARICRKLQHPNIVRLHDSIQEES--FHYLVFDLVTGGELFEDIVAREFYSEADASH 109
Query: 461 WTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518
+++ I +H L P S+ +AV KL DF +
Sbjct: 110 CIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAV--------KLADF-GLAIEVND 160
Query: 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566
SE G G+ G + P L+ +I+A GV+L ++ G PP
Sbjct: 161 SEAWHGFAGTPGYLS--PEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 12/176 (6%)
Query: 399 GYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQ 458
G +E +Q E+A L +++H N KL+ + + +VF+ + G + E
Sbjct: 78 GPIEQVYQ-EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME---VPTLKP 133
Query: 459 VSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518
+S + + +G++YLH + ++ S + + ED K+ DF
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGS 190
Query: 519 SEKNPGTLGSQGAICILPSSLEARHLDVQG---NIYAFGVLLLEIISGRPPCCKDK 571
T+G+ + P SL G +++A GV L + G+ P ++
Sbjct: 191 DALLSNTVGTPAFMA--PESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 22/223 (9%)
Query: 359 CEDFSNI---IGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWT--GYLELYFQREVADL 412
EDF +I +GS ++V K K G E A + ++ + G +REV+ L
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSIL 69
Query: 413 ARINHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIA 472
++ H N L + +L+ + S G L++ L ++ +S + I
Sbjct: 70 RQVLHPNIITLHDVYENRTDV--VLILELVSGGELFDFL--AQKESLSEEEATSFIKQIL 125
Query: 473 RGLKYLHTELGPPFTISELNSSAVYLTEDFSP----KLVDFDSWKTILARSE-KNPGTLG 527
G+ YLHT+ F +L + L + P KL+DF I E KN G
Sbjct: 126 DGVNYLHTKKIAHF---DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFG 180
Query: 528 SQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKD 570
+ + P + L ++ ++++ GV+ ++SG P D
Sbjct: 181 TPEFVA--PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,604,204
Number of Sequences: 62578
Number of extensions: 765280
Number of successful extensions: 2329
Number of sequences better than 100.0: 425
Number of HSP's better than 100.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 344
Number of HSP's that attempted gapping in prelim test: 2034
Number of HSP's gapped (non-prelim): 457
length of query: 658
length of database: 14,973,337
effective HSP length: 105
effective length of query: 553
effective length of database: 8,402,647
effective search space: 4646663791
effective search space used: 4646663791
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)