Query 006178
Match_columns 658
No_of_seqs 967 out of 4876
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 18:06:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006178.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006178hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gt4_A Tyrosine-protein kinase 100.0 2.8E-57 9.5E-62 462.0 13.8 264 354-637 22-306 (308)
2 4asz_A BDNF/NT-3 growth factor 100.0 1.9E-56 6.5E-61 453.9 14.6 256 362-638 17-290 (299)
3 4aoj_A High affinity nerve gro 100.0 9E-56 3.1E-60 455.1 18.7 257 362-639 45-321 (329)
4 3omv_A RAF proto-oncogene seri 100.0 4.4E-55 1.5E-59 443.7 21.4 260 362-639 40-302 (307)
5 4b9d_A Serine/threonine-protei 100.0 1.3E-53 4.4E-58 439.0 13.5 250 361-631 27-277 (350)
6 4ase_A Vascular endothelial gr 100.0 2.7E-53 9.2E-58 440.2 13.4 261 360-640 66-350 (353)
7 3fpq_A Serine/threonine-protei 100.0 1.7E-51 6E-56 414.3 23.7 249 362-630 30-282 (290)
8 4g3f_A NF-kappa-beta-inducing 100.0 1.6E-52 5.6E-57 428.8 14.6 248 363-637 63-316 (336)
9 4fih_A Serine/threonine-protei 100.0 6.6E-52 2.2E-56 425.6 17.2 245 363-631 79-324 (346)
10 4aw0_A HPDK1, 3-phosphoinositi 100.0 4.4E-52 1.5E-56 420.5 14.8 250 360-630 34-284 (311)
11 3hmm_A TGF-beta receptor type- 100.0 1E-51 3.5E-56 422.0 14.1 262 362-638 7-298 (303)
12 4fie_A Serine/threonine-protei 100.0 1.1E-50 3.6E-55 426.8 18.1 245 363-631 156-401 (423)
13 3hyh_A Carbon catabolite-derep 100.0 2E-50 6.8E-55 403.0 18.8 247 360-631 15-263 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 1.4E-50 4.6E-55 409.7 12.3 242 360-625 26-271 (304)
15 4g31_A Eukaryotic translation 100.0 2.7E-49 9.3E-54 402.0 17.1 249 362-630 9-279 (299)
16 4b99_A Mitogen-activated prote 100.0 7.3E-47 2.5E-51 398.8 18.4 263 361-631 57-345 (398)
17 4f9c_A Cell division cycle 7-r 100.0 4.4E-46 1.5E-50 388.7 18.4 255 361-631 24-353 (361)
18 2nru_A Interleukin-1 receptor- 100.0 1.7E-44 5.9E-49 371.2 24.4 284 347-637 12-306 (307)
19 3v5w_A G-protein coupled recep 100.0 1.8E-45 6E-50 404.0 17.7 246 363-630 194-449 (689)
20 2qkw_B Protein kinase; three-h 100.0 3.5E-45 1.2E-49 378.9 18.8 273 357-639 36-317 (321)
21 3uim_A Brassinosteroid insensi 100.0 1.1E-44 3.7E-49 376.1 20.3 283 346-635 16-309 (326)
22 3uto_A Twitchin; kinase, muscl 100.0 1.5E-44 5.2E-49 399.7 22.3 250 360-631 159-411 (573)
23 2psq_A Fibroblast growth facto 100.0 3.1E-44 1E-48 378.8 18.2 255 362-637 85-364 (370)
24 3p86_A Serine/threonine-protei 100.0 2E-43 7E-48 363.2 18.8 259 362-641 41-302 (309)
25 3kul_A Ephrin type-A receptor 100.0 1E-43 3.5E-48 368.3 15.9 262 360-642 51-318 (325)
26 4hcu_A Tyrosine-protein kinase 100.0 2E-43 7E-48 356.0 15.3 253 362-638 14-267 (269)
27 3cbl_A C-FES, proto-oncogene t 100.0 5.7E-44 1.9E-48 378.0 11.1 255 362-637 118-374 (377)
28 3l9p_A Anaplastic lymphoma kin 100.0 2.2E-43 7.5E-48 371.9 15.5 260 361-640 74-348 (367)
29 3ugc_A Tyrosine-protein kinase 100.0 1.1E-43 3.6E-48 363.2 12.0 268 360-638 12-292 (295)
30 3fxz_A Serine/threonine-protei 100.0 1.6E-42 5.6E-47 354.5 20.5 246 362-631 24-270 (297)
31 3s95_A LIMK-1, LIM domain kina 100.0 6.5E-43 2.2E-47 360.0 17.7 256 362-637 14-282 (310)
32 3soc_A Activin receptor type-2 100.0 5.9E-43 2E-47 362.2 17.3 261 362-637 28-318 (322)
33 2qol_A Ephrin receptor; recept 100.0 2.7E-43 9.4E-48 371.7 15.1 258 361-639 48-311 (373)
34 3lb7_A RAF proto-oncogene seri 100.0 1.8E-42 6E-47 356.0 20.7 262 360-639 38-302 (307)
35 1luf_A Muscle-specific tyrosin 100.0 4.8E-43 1.6E-47 366.3 16.3 258 362-639 51-337 (343)
36 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.2E-43 7.5E-48 355.5 13.1 254 361-638 11-265 (268)
37 2c30_A Serine/threonine-protei 100.0 4.3E-42 1.5E-46 355.4 22.8 260 348-631 23-295 (321)
38 3fe3_A MAP/microtubule affinit 100.0 1.9E-42 6.5E-47 358.5 19.9 245 362-631 19-265 (328)
39 3tt0_A Basic fibroblast growth 100.0 7.5E-43 2.6E-47 370.2 16.6 261 361-641 72-356 (382)
40 1qcf_A Haematopoetic cell kina 100.0 2.7E-43 9.2E-48 382.0 13.4 254 362-639 192-446 (454)
41 3poz_A Epidermal growth factor 100.0 1.2E-42 4E-47 360.8 17.1 254 362-638 19-279 (327)
42 3qup_A Tyrosine-protein kinase 100.0 6.5E-43 2.2E-47 362.2 15.2 267 361-644 26-305 (323)
43 1opk_A P150, C-ABL, proto-onco 100.0 4.1E-43 1.4E-47 384.2 13.7 255 361-639 223-480 (495)
44 3vhe_A Vascular endothelial gr 100.0 7.4E-43 2.5E-47 367.3 15.1 267 353-637 15-355 (359)
45 2ivs_A Proto-oncogene tyrosine 100.0 8.8E-43 3E-47 359.5 15.0 255 362-637 27-311 (314)
46 4eqm_A Protein kinase; transfe 100.0 1E-41 3.5E-46 348.2 22.6 263 362-641 15-279 (294)
47 1k9a_A Carboxyl-terminal SRC k 100.0 2.1E-42 7.1E-47 374.4 18.3 248 362-638 197-446 (450)
48 3gen_A Tyrosine-protein kinase 100.0 1.3E-42 4.6E-47 352.7 15.2 252 362-637 28-280 (283)
49 3zgw_A Maternal embryonic leuc 100.0 2.4E-42 8.4E-47 359.8 17.3 246 362-631 14-261 (347)
50 2yab_A Death-associated protei 100.0 2E-41 6.8E-46 355.1 24.0 252 361-631 15-273 (361)
51 3tki_A Serine/threonine-protei 100.0 3.6E-42 1.2E-46 356.2 17.9 250 362-631 11-262 (323)
52 4f0f_A Serine/threonine-protei 100.0 1.5E-41 5.1E-46 345.7 21.9 253 361-635 22-287 (287)
53 3dtc_A Mitogen-activated prote 100.0 3.9E-42 1.3E-46 346.9 17.1 253 362-635 11-271 (271)
54 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.1E-42 3.9E-47 376.7 13.8 254 362-639 188-442 (452)
55 3op5_A Serine/threonine-protei 100.0 1.1E-42 3.6E-47 366.7 13.1 268 362-638 39-330 (364)
56 3c1x_A Hepatocyte growth facto 100.0 2.1E-42 7.1E-47 364.7 15.0 259 362-641 93-359 (373)
57 2y0a_A Death-associated protei 100.0 4.2E-41 1.4E-45 348.8 24.4 253 360-631 13-272 (326)
58 1csn_A Casein kinase-1; phosph 100.0 2.4E-42 8.2E-47 353.5 14.5 272 362-654 14-298 (298)
59 1rjb_A FL cytokine receptor; k 100.0 6.2E-42 2.1E-46 358.1 17.8 262 361-641 48-338 (344)
60 3og7_A AKAP9-BRAF fusion prote 100.0 8.1E-42 2.8E-46 348.1 18.1 260 360-637 26-288 (289)
61 4euu_A Serine/threonine-protei 100.0 4.9E-41 1.7E-45 347.4 24.1 266 362-636 13-308 (319)
62 3niz_A Rhodanese family protei 100.0 1.3E-41 4.5E-46 350.2 19.6 259 362-631 25-301 (311)
63 3kex_A Receptor tyrosine-prote 100.0 1.1E-41 3.7E-46 353.2 19.0 254 362-638 17-277 (325)
64 3kmu_A ILK, integrin-linked ki 100.0 6.3E-42 2.2E-46 345.1 16.8 252 362-637 14-270 (271)
65 1tki_A Titin; serine kinase, m 100.0 1.5E-41 5.2E-46 351.1 19.9 247 362-631 9-258 (321)
66 1p4o_A Insulin-like growth fac 100.0 1.1E-42 3.7E-47 360.3 11.3 259 362-640 29-302 (322)
67 1t46_A HOMO sapiens V-KIT hard 100.0 6.1E-42 2.1E-46 353.1 16.4 258 360-638 25-308 (313)
68 3lzb_A Epidermal growth factor 100.0 5.2E-42 1.8E-46 355.7 15.9 254 362-638 19-279 (327)
69 3kfa_A Tyrosine-protein kinase 100.0 1.9E-42 6.5E-47 352.5 12.2 255 360-638 15-272 (288)
70 3t9t_A Tyrosine-protein kinase 100.0 3.7E-42 1.3E-46 346.2 14.0 253 362-638 12-265 (267)
71 1o6l_A RAC-beta serine/threoni 100.0 3.2E-41 1.1E-45 350.3 21.1 247 362-631 9-261 (337)
72 1mp8_A Focal adhesion kinase 1 100.0 7.4E-42 2.5E-46 346.9 15.9 254 360-637 17-276 (281)
73 2pvf_A Fibroblast growth facto 100.0 6.7E-42 2.3E-46 356.3 15.8 259 360-638 37-319 (334)
74 1ob3_A PFPK5, cell division co 100.0 1.8E-41 6.2E-46 345.3 18.2 259 362-631 6-281 (288)
75 2bdw_A Hypothetical protein K1 100.0 7.5E-41 2.6E-45 351.6 23.1 251 360-631 31-285 (362)
76 3soa_A Calcium/calmodulin-depe 100.0 9.5E-41 3.3E-45 359.1 24.4 252 360-631 13-268 (444)
77 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.1E-41 3.7E-46 353.6 16.4 245 362-631 13-259 (336)
78 3brb_A Proto-oncogene tyrosine 100.0 1.1E-41 3.9E-46 351.2 16.4 259 362-638 38-309 (313)
79 3gni_B Strad alpha; kinase fol 100.0 2.7E-41 9.4E-46 359.3 19.8 264 361-631 28-334 (389)
80 3f66_A Hepatocyte growth facto 100.0 1.6E-41 5.6E-46 347.4 17.4 257 362-639 29-293 (298)
81 1mqb_A Ephrin type-A receptor 100.0 1.9E-41 6.5E-46 352.5 18.0 258 363-641 49-313 (333)
82 3c0i_A Peripheral plasma membr 100.0 4.8E-41 1.6E-45 352.0 20.6 256 359-631 25-287 (351)
83 3q4u_A Activin receptor type-1 100.0 4.9E-42 1.7E-46 351.8 12.5 254 362-635 12-300 (301)
84 2eva_A TAK1 kinase - TAB1 chim 100.0 4.5E-41 1.5E-45 345.7 19.7 252 362-639 12-265 (307)
85 3dbq_A Dual specificity protei 100.0 3E-41 1E-45 352.6 18.7 250 362-632 13-275 (343)
86 1qpc_A LCK kinase; alpha beta 100.0 8.4E-42 2.9E-46 346.1 13.7 254 361-638 16-270 (279)
87 1u59_A Tyrosine-protein kinase 100.0 2.6E-41 8.8E-46 344.0 16.9 253 364-638 16-273 (287)
88 4e5w_A Tyrosine-protein kinase 100.0 1.7E-42 5.9E-47 355.3 8.1 266 361-636 24-301 (302)
89 2ozo_A Tyrosine-protein kinase 100.0 2.1E-41 7.4E-46 379.3 17.7 251 365-637 343-598 (613)
90 2h8h_A Proto-oncogene tyrosine 100.0 4.3E-42 1.5E-46 379.5 11.8 254 362-639 271-525 (535)
91 4dc2_A Protein kinase C IOTA t 100.0 2.5E-41 8.4E-46 357.7 17.1 243 362-625 56-307 (396)
92 4fl3_A Tyrosine-protein kinase 100.0 2.1E-41 7.3E-46 380.2 17.4 251 364-636 375-630 (635)
93 4fr4_A YANK1, serine/threonine 100.0 6.1E-41 2.1E-45 353.4 19.8 247 362-630 19-271 (384)
94 2zv2_A Calcium/calmodulin-depe 100.0 5.2E-41 1.8E-45 343.8 18.5 251 361-630 16-292 (298)
95 2izr_A Casein kinase I isoform 100.0 2E-41 6.8E-46 352.1 15.6 256 362-637 13-281 (330)
96 3o0g_A Cell division protein k 100.0 1.1E-40 3.8E-45 340.2 20.7 259 362-631 6-283 (292)
97 2w4o_A Calcium/calmodulin-depe 100.0 6.3E-41 2.2E-45 350.7 19.3 246 362-631 57-306 (349)
98 3qd2_B Eukaryotic translation 100.0 2.9E-41 1E-45 350.9 16.7 250 362-631 10-326 (332)
99 2i1m_A Macrophage colony-stimu 100.0 2E-41 6.9E-46 352.5 15.4 256 361-637 49-326 (333)
100 2zmd_A Dual specificity protei 100.0 7.1E-41 2.4E-45 355.5 19.9 250 361-631 59-321 (390)
101 4aw2_A Serine/threonine-protei 100.0 9.2E-42 3.1E-46 365.7 13.0 265 351-631 65-339 (437)
102 2x4f_A Myosin light chain kina 100.0 1.6E-40 5.6E-45 350.4 22.2 246 364-631 95-343 (373)
103 2xir_A Vascular endothelial gr 100.0 1.3E-41 4.6E-46 351.0 13.6 259 362-638 31-311 (316)
104 3a62_A Ribosomal protein S6 ki 100.0 5.5E-41 1.9E-45 348.1 18.1 249 361-631 20-277 (327)
105 3lxl_A Tyrosine-protein kinase 100.0 5.7E-42 2E-46 355.7 10.7 272 361-640 26-306 (327)
106 3pls_A Macrophage-stimulating 100.0 6.1E-41 2.1E-45 343.1 18.1 256 363-639 26-289 (298)
107 1kob_A Twitchin; kinase, intra 100.0 2.2E-40 7.5E-45 350.4 22.7 249 361-631 54-305 (387)
108 4fvq_A Tyrosine-protein kinase 100.0 1.4E-41 4.9E-46 346.2 12.9 252 361-641 11-279 (289)
109 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.8E-41 9.6E-46 353.1 15.3 248 360-630 25-280 (353)
110 3g33_A Cell division protein k 100.0 3.4E-40 1.2E-44 339.3 23.0 266 359-631 10-297 (308)
111 2yfx_A Tyrosine-protein kinase 100.0 4.6E-41 1.6E-45 348.9 16.4 260 360-639 32-306 (327)
112 3lxp_A Non-receptor tyrosine-p 100.0 1.5E-41 5.1E-46 351.1 12.3 268 362-638 35-311 (318)
113 3cc6_A Protein tyrosine kinase 100.0 3.3E-41 1.1E-45 342.1 14.7 253 362-638 16-274 (281)
114 2v62_A Serine/threonine-protei 100.0 5.9E-41 2E-45 350.7 17.0 267 361-637 40-328 (345)
115 1xbb_A Tyrosine-protein kinase 100.0 3.3E-41 1.1E-45 344.0 14.7 252 365-638 24-280 (291)
116 1fot_A TPK1 delta, CAMP-depend 100.0 1.8E-40 6.1E-45 342.2 20.1 244 362-631 10-259 (318)
117 2a2a_A Death-associated protei 100.0 6.1E-40 2.1E-44 339.5 24.2 253 360-631 14-273 (321)
118 3kn6_A Ribosomal protein S6 ki 100.0 8.2E-41 2.8E-45 346.3 17.5 242 364-631 17-271 (325)
119 3uc3_A Serine/threonine-protei 100.0 1.5E-40 5.2E-45 349.3 19.6 247 361-631 23-275 (361)
120 2jii_A Serine/threonine-protei 100.0 1.2E-41 3.9E-46 357.1 10.9 271 361-652 45-349 (352)
121 2yex_A Serine/threonine-protei 100.0 3.3E-40 1.1E-44 333.7 20.9 251 361-631 10-262 (276)
122 1byg_A CSK, protein (C-termina 100.0 2.3E-41 8E-46 342.7 12.4 248 362-637 25-273 (278)
123 3a8x_A Protein kinase C IOTA t 100.0 3E-40 1E-44 344.5 21.0 243 362-625 13-264 (345)
124 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.8E-40 6.1E-45 346.8 19.1 243 363-631 46-294 (350)
125 4hgt_A Casein kinase I isoform 100.0 1.3E-40 4.3E-45 340.3 17.5 271 360-654 11-295 (296)
126 3hko_A Calcium/calmodulin-depe 100.0 4.5E-40 1.5E-44 344.1 21.9 258 360-631 28-331 (345)
127 4eut_A Serine/threonine-protei 100.0 2.1E-40 7.2E-45 353.0 19.7 269 362-639 13-311 (396)
128 1xjd_A Protein kinase C, theta 100.0 7.1E-41 2.4E-45 348.7 15.7 245 362-629 21-268 (345)
129 2h34_A Serine/threonine-protei 100.0 4E-40 1.4E-44 338.9 21.2 262 361-641 37-300 (309)
130 3uzp_A CKI-delta, CKID, casein 100.0 2.1E-40 7.2E-45 338.7 18.7 269 362-654 13-295 (296)
131 1nxk_A MAP kinase-activated pr 100.0 2.9E-40 9.8E-45 351.8 20.3 243 364-631 68-322 (400)
132 3v8s_A RHO-associated protein 100.0 5.9E-41 2E-45 356.7 15.0 259 354-631 63-330 (410)
133 2pmi_A Negative RE, cyclin-dep 100.0 2.3E-40 7.8E-45 342.0 18.8 259 362-631 9-294 (317)
134 3p1a_A MYT1 kinase, membrane-a 100.0 9.8E-41 3.3E-45 343.8 15.8 245 359-630 58-304 (311)
135 2w1i_A JAK2; chromosomal rearr 100.0 1.5E-41 5E-46 352.5 9.5 266 361-637 44-322 (326)
136 3ork_A Serine/threonine protei 100.0 1.8E-40 6.2E-45 341.8 17.3 262 361-637 15-281 (311)
137 3fdn_A Serine/threonine-protei 100.0 2.3E-40 7.9E-45 335.5 17.7 244 363-631 14-258 (279)
138 1fvr_A Tyrosine-protein kinase 100.0 6.8E-41 2.3E-45 347.6 14.0 256 361-639 28-302 (327)
139 2a19_B Interferon-induced, dou 100.0 5.6E-41 1.9E-45 340.7 13.1 250 360-640 13-277 (284)
140 2vd5_A DMPK protein; serine/th 100.0 4E-41 1.4E-45 358.2 12.4 265 350-631 51-328 (412)
141 2qr7_A Ribosomal protein S6 ki 100.0 3.4E-40 1.1E-44 343.7 19.0 248 360-631 24-278 (342)
142 2i0e_A Protein kinase C-beta I 100.0 2.5E-40 8.5E-45 345.7 17.9 248 361-631 23-277 (353)
143 3llt_A Serine/threonine kinase 100.0 2.9E-40 9.8E-45 347.7 18.2 253 362-630 39-355 (360)
144 3dls_A PAS domain-containing s 100.0 1.8E-40 6.1E-45 345.2 16.4 241 362-631 28-275 (335)
145 2ac3_A MAP kinase-interacting 100.0 7.4E-40 2.5E-44 338.1 20.9 246 364-631 19-296 (316)
146 3bhy_A Death-associated protei 100.0 1.3E-39 4.5E-44 330.6 22.3 258 360-636 7-273 (283)
147 2y94_A 5'-AMP-activated protei 100.0 2.4E-40 8.3E-45 358.3 17.9 247 361-631 19-267 (476)
148 3kk8_A Calcium/calmodulin depe 100.0 1.6E-39 5.6E-44 330.1 22.7 249 362-631 10-262 (284)
149 3lm5_A Serine/threonine-protei 100.0 1.3E-39 4.5E-44 337.8 22.3 249 364-631 35-288 (327)
150 2w5a_A Serine/threonine-protei 100.0 3.9E-41 1.3E-45 341.2 10.5 254 362-634 10-271 (279)
151 2eue_A Carbon catabolite derep 100.0 3.7E-40 1.3E-44 333.3 17.6 245 362-631 17-263 (275)
152 3ttj_A Mitogen-activated prote 100.0 9.2E-40 3.1E-44 354.2 21.9 256 362-631 66-356 (464)
153 3oz6_A Mitogen-activated prote 100.0 2.9E-40 1E-44 351.2 17.7 262 361-631 12-329 (388)
154 3f3z_A Calcium/calmodulin-depe 100.0 1.8E-39 6E-44 328.6 22.5 243 360-630 11-261 (277)
155 1u5q_A Serine/threonine protei 100.0 4.5E-40 1.5E-44 343.8 18.4 246 363-633 59-308 (348)
156 3is5_A Calcium-dependent prote 100.0 9.9E-40 3.4E-44 331.9 20.5 249 360-630 24-278 (285)
157 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.7E-40 9.1E-45 348.6 16.5 248 362-638 69-340 (365)
158 1x8b_A WEE1HU, WEE1-like prote 100.0 2.9E-40 9.9E-45 336.1 16.2 243 361-631 14-280 (289)
159 2wtk_C Serine/threonine-protei 100.0 2.7E-40 9.1E-45 339.5 15.9 254 361-631 8-264 (305)
160 3gxj_A TGF-beta receptor type- 100.0 1.3E-41 4.3E-46 349.0 6.0 259 361-639 6-299 (303)
161 4agu_A Cyclin-dependent kinase 100.0 4.4E-40 1.5E-44 338.9 17.6 259 362-631 7-285 (311)
162 3cok_A Serine/threonine-protei 100.0 5.2E-40 1.8E-44 332.7 17.7 248 362-631 15-263 (278)
163 2r5t_A Serine/threonine-protei 100.0 3.2E-40 1.1E-44 347.3 16.8 247 362-631 42-290 (373)
164 2acx_A G protein-coupled recep 100.0 3.9E-40 1.3E-44 361.4 18.0 249 363-631 189-445 (576)
165 2buj_A Serine/threonine-protei 100.0 3.2E-40 1.1E-44 341.0 16.4 261 361-641 32-310 (317)
166 2wqm_A Serine/threonine-protei 100.0 2.3E-39 8E-44 333.4 22.6 261 361-638 35-298 (310)
167 3mdy_A Bone morphogenetic prot 100.0 5.6E-40 1.9E-44 342.1 18.0 266 357-639 36-333 (337)
168 2rku_A Serine/threonine-protei 100.0 7.9E-40 2.7E-44 334.3 18.7 247 362-631 19-266 (294)
169 1t4h_A Serine/threonine-protei 100.0 3.6E-39 1.2E-43 328.7 23.4 248 362-631 30-283 (290)
170 3i6u_A CDS1, serine/threonine- 100.0 1.2E-39 4E-44 349.5 20.4 251 360-631 137-400 (419)
171 2owb_A Serine/threonine-protei 100.0 6.9E-40 2.4E-44 341.1 18.2 247 362-631 45-292 (335)
172 3rp9_A Mitogen-activated prote 100.0 6.9E-40 2.4E-44 356.1 18.8 263 361-631 56-397 (458)
173 2vgo_A Serine/threonine-protei 100.0 4.3E-40 1.5E-44 334.4 15.9 246 361-631 17-263 (284)
174 4ejn_A RAC-alpha serine/threon 100.0 2.9E-40 1E-44 357.6 14.9 247 362-631 152-405 (446)
175 3g2f_A Bone morphogenetic prot 100.0 2.9E-40 9.9E-45 344.2 14.3 272 362-647 17-328 (336)
176 1cm8_A Phosphorylated MAP kina 100.0 1.4E-39 4.9E-44 342.7 19.6 260 362-635 29-314 (367)
177 2jam_A Calcium/calmodulin-depe 100.0 4.1E-39 1.4E-43 330.6 22.5 248 360-631 11-262 (304)
178 1vzo_A Ribosomal protein S6 ki 100.0 2.4E-40 8.4E-45 347.2 13.4 252 362-632 58-323 (355)
179 2r3i_A Cell division protein k 100.0 1E-39 3.4E-44 334.2 17.6 258 363-630 8-283 (299)
180 1b6c_B TGF-B superfamily recep 100.0 7.3E-40 2.5E-44 342.0 16.6 266 353-638 37-337 (342)
181 2y7j_A Phosphorylase B kinase 100.0 1E-38 3.5E-43 336.0 25.2 250 363-631 99-360 (365)
182 3gbz_A Kinase, CMGC CDK; ssgci 100.0 8.1E-40 2.8E-44 339.7 16.4 257 362-630 38-318 (329)
183 3eqc_A Dual specificity mitoge 100.0 1.4E-39 4.7E-44 342.5 18.1 257 362-631 37-325 (360)
184 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.8E-39 6.2E-44 355.3 19.5 248 364-630 191-448 (543)
185 1ua2_A CAK, cell division prot 100.0 1.9E-39 6.6E-44 339.3 18.5 262 361-631 13-292 (346)
186 3mwu_A Calmodulin-domain prote 100.0 6.6E-39 2.3E-43 350.9 23.6 250 360-631 24-277 (486)
187 3n9x_A Phosphotransferase; mal 100.0 3.6E-39 1.2E-43 347.3 21.0 199 361-567 29-252 (432)
188 4aaa_A Cyclin-dependent kinase 100.0 1.8E-39 6.2E-44 337.4 18.0 259 362-631 29-307 (331)
189 1u46_A ACK-1, activated CDC42 100.0 3.8E-40 1.3E-44 335.9 12.6 261 361-640 21-287 (291)
190 3mtl_A Cell division protein k 100.0 2.8E-40 9.7E-45 342.4 11.4 258 362-631 6-282 (324)
191 2y4i_B KSR2, HKSR2, kinase sup 100.0 7.8E-40 2.7E-44 338.3 14.6 256 362-639 37-304 (319)
192 3a7i_A MST3 kinase, serine/thr 100.0 2E-39 6.9E-44 332.7 17.2 245 363-632 27-272 (303)
193 3rgf_A Cyclin-dependent kinase 100.0 3E-39 1E-43 345.4 19.2 258 364-631 27-334 (405)
194 3ll6_A Cyclin G-associated kin 100.0 1.1E-39 3.6E-44 339.9 15.3 255 361-638 31-309 (337)
195 2clq_A Mitogen-activated prote 100.0 3.2E-39 1.1E-43 329.8 18.5 247 364-631 28-279 (295)
196 3lij_A Calcium/calmodulin depe 100.0 8.9E-39 3.1E-43 350.4 23.2 250 360-631 39-292 (494)
197 3sv0_A Casein kinase I-like; t 100.0 9.6E-40 3.3E-44 354.2 15.2 272 362-654 11-293 (483)
198 3com_A Serine/threonine-protei 100.0 4.2E-39 1.4E-43 332.1 19.3 247 361-631 32-279 (314)
199 3eb0_A Putative uncharacterize 100.0 1.3E-39 4.6E-44 345.4 15.9 255 362-631 11-322 (383)
200 3mi9_A Cell division protein k 100.0 3.2E-39 1.1E-43 338.4 18.6 264 361-631 20-312 (351)
201 3kvw_A DYRK2, dual specificity 100.0 6.1E-39 2.1E-43 344.8 21.1 195 361-571 100-303 (429)
202 3pg1_A Mitogen-activated prote 100.0 2.7E-39 9.2E-44 340.6 18.0 273 351-631 13-317 (362)
203 2pml_X PFPK7, Ser/Thr protein 100.0 3E-39 1E-43 338.2 18.3 259 362-631 35-323 (348)
204 3cek_A Dual specificity protei 100.0 4.2E-39 1.4E-43 332.0 19.0 249 362-631 32-293 (313)
205 2x7f_A TRAF2 and NCK-interacti 100.0 7.5E-40 2.6E-44 339.6 13.5 248 363-631 29-287 (326)
206 3nsz_A CK II alpha, casein kin 100.0 8E-39 2.7E-43 332.4 20.8 252 362-631 40-320 (330)
207 2vwi_A Serine/threonine-protei 100.0 8.6E-40 2.9E-44 335.3 13.1 258 362-631 19-288 (303)
208 1j1b_A Glycogen synthase kinas 100.0 1.7E-39 6E-44 348.3 16.0 255 362-631 58-337 (420)
209 2xrw_A Mitogen-activated prote 100.0 1.2E-38 4E-43 336.5 21.9 256 362-631 29-319 (371)
210 3q5i_A Protein kinase; CDPK, m 100.0 1.3E-38 4.4E-43 350.1 22.7 250 362-631 40-302 (504)
211 3byv_A Rhoptry kinase; malaria 100.0 2E-40 6.9E-45 350.9 8.1 240 363-630 78-359 (377)
212 2h6d_A 5'-AMP-activated protei 100.0 2.4E-39 8.3E-44 327.4 15.4 246 362-631 15-262 (276)
213 2j7t_A Serine/threonine-protei 100.0 4.2E-39 1.4E-43 330.2 17.4 248 362-631 23-276 (302)
214 3fme_A Dual specificity mitoge 100.0 2.4E-39 8.2E-44 329.8 15.3 249 362-630 11-266 (290)
215 4e7w_A Glycogen synthase kinas 100.0 1.8E-39 6.1E-44 345.4 14.8 260 361-635 43-328 (394)
216 3q60_A ROP5B; pseudokinase, tr 100.0 7.9E-40 2.7E-44 345.7 12.0 253 362-630 66-352 (371)
217 3nyv_A Calmodulin-domain prote 100.0 1.1E-38 3.6E-43 349.3 21.1 252 359-631 27-282 (484)
218 2j0j_A Focal adhesion kinase 1 100.0 2E-39 6.8E-44 365.5 15.4 255 360-637 392-651 (656)
219 2fst_X Mitogen-activated prote 100.0 3.8E-39 1.3E-43 339.1 15.4 256 362-631 33-312 (367)
220 1blx_A Cyclin-dependent kinase 100.0 1E-38 3.5E-43 331.0 18.4 261 362-631 15-297 (326)
221 2ycf_A Serine/threonine-protei 100.0 8.3E-39 2.9E-43 331.1 17.5 251 359-630 11-274 (322)
222 3pfq_A PKC-B, PKC-beta, protei 100.0 3E-39 1E-43 365.2 15.2 247 361-630 344-597 (674)
223 1z57_A Dual specificity protei 100.0 1.2E-38 4.2E-43 332.0 18.1 256 360-631 16-329 (339)
224 1phk_A Phosphorylase kinase; g 100.0 3.3E-38 1.1E-42 322.8 20.8 249 363-630 22-283 (298)
225 1wak_A Serine/threonine-protei 100.0 1.4E-38 4.8E-43 339.3 18.4 259 360-631 39-392 (397)
226 4exu_A Mitogen-activated prote 100.0 4.3E-38 1.5E-42 332.3 21.7 255 362-631 46-324 (371)
227 3e3p_A Protein kinase, putativ 100.0 1.7E-38 5.9E-43 334.1 18.4 262 363-636 28-322 (360)
228 3an0_A Dual specificity mitoge 100.0 8.4E-39 2.9E-43 333.8 15.8 248 363-631 56-311 (340)
229 3qyz_A Mitogen-activated prote 100.0 4.6E-38 1.6E-42 331.3 21.1 260 362-631 31-314 (364)
230 2wei_A Calmodulin-domain prote 100.0 7.5E-38 2.6E-42 318.4 21.7 252 358-631 22-277 (287)
231 2i6l_A Mitogen-activated prote 100.0 4.6E-38 1.6E-42 325.0 19.5 258 363-631 16-306 (320)
232 3coi_A Mitogen-activated prote 100.0 4.9E-38 1.7E-42 329.7 20.0 255 362-631 28-306 (353)
233 1zy4_A Serine/threonine-protei 100.0 5.2E-38 1.8E-42 321.8 19.7 251 361-631 9-284 (303)
234 2b9h_A MAP kinase FUS3, mitoge 100.0 1.4E-38 4.9E-43 333.8 15.8 260 362-631 15-306 (353)
235 2rio_A Serine/threonine-protei 100.0 2.7E-38 9.1E-43 340.5 17.2 246 364-630 21-295 (434)
236 3fhr_A MAP kinase-activated pr 100.0 1.5E-38 5.2E-43 331.0 14.7 246 364-631 35-288 (336)
237 2vx3_A Dual specificity tyrosi 100.0 1E-37 3.4E-42 330.8 21.1 196 362-571 58-262 (382)
238 3a99_A Proto-oncogene serine/t 100.0 1.5E-38 5.3E-43 328.7 10.8 241 361-631 46-294 (320)
239 2eu9_A Dual specificity protei 100.0 2E-37 6.7E-42 325.1 19.0 256 360-631 21-334 (355)
240 3aln_A Dual specificity mitoge 100.0 1E-37 3.5E-42 323.7 16.6 250 363-631 27-286 (327)
241 2iwi_A Serine/threonine-protei 100.0 2.8E-38 9.7E-43 325.6 11.1 242 360-631 33-284 (312)
242 2dyl_A Dual specificity mitoge 100.0 2.6E-37 8.8E-42 319.2 18.3 249 362-631 29-284 (318)
243 1q8y_A SR protein kinase; tran 100.0 1.3E-37 4.5E-42 329.0 16.3 259 360-631 21-334 (373)
244 3p23_A Serine/threonine-protei 100.0 1E-37 3.5E-42 335.1 15.4 244 363-630 29-283 (432)
245 3uqc_A Probable conserved tran 100.0 5.3E-37 1.8E-41 311.5 16.9 230 361-639 34-267 (286)
246 3m2w_A MAP kinase-activated pr 100.0 1E-36 3.4E-41 312.0 18.3 221 364-631 24-257 (299)
247 3qa8_A MGC80376 protein; kinas 100.0 2.8E-37 9.6E-42 341.8 13.7 270 360-639 16-311 (676)
248 2pzi_A Probable serine/threoni 100.0 3.1E-36 1.1E-40 342.8 15.1 240 360-636 82-327 (681)
249 2vuw_A Serine/threonine-protei 100.0 2.1E-36 7.1E-41 315.0 10.2 242 359-629 21-329 (336)
250 3dzo_A Rhoptry kinase domain; 100.0 7.3E-36 2.5E-40 319.4 13.9 240 363-630 83-363 (413)
251 1ogq_A PGIP-2, polygalacturona 100.0 6.6E-30 2.3E-34 262.8 15.4 219 23-246 2-235 (313)
252 4azs_A Methyltransferase WBDD; 100.0 3.8E-30 1.3E-34 284.6 7.3 190 364-566 240-437 (569)
253 3rgz_A Protein brassinosteroid 99.9 4.4E-27 1.5E-31 271.4 15.5 214 24-246 9-261 (768)
254 4eco_A Uncharacterized protein 99.9 1.1E-26 3.6E-31 262.2 10.7 216 26-245 29-366 (636)
255 3en9_A Glycoprotease, O-sialog 99.9 3.7E-27 1.3E-31 259.2 5.9 187 364-568 342-539 (540)
256 4ecn_A Leucine-rich repeat pro 99.9 4.3E-26 1.5E-30 262.1 13.1 212 25-245 267-608 (876)
257 4fcg_A Uncharacterized protein 99.9 3.3E-26 1.1E-30 236.7 9.6 219 24-248 24-269 (328)
258 1zar_A RIO2 kinase; serine kin 99.9 1.3E-23 4.5E-28 211.8 7.3 133 363-514 95-241 (282)
259 2o6q_A Variable lymphocyte rec 99.9 1.1E-20 3.7E-25 189.7 19.3 174 71-246 38-219 (270)
260 3rgz_A Protein brassinosteroid 99.8 1.4E-21 4.7E-26 225.5 12.1 115 70-184 442-556 (768)
261 2o6s_A Variable lymphocyte rec 99.8 4.9E-21 1.7E-25 184.3 12.1 176 57-236 6-190 (208)
262 3m19_A Variable lymphocyte rec 99.8 2.2E-20 7.7E-25 185.3 15.8 184 56-247 3-194 (251)
263 1ogq_A PGIP-2, polygalacturona 99.8 2.2E-21 7.5E-26 199.2 8.4 174 70-246 76-258 (313)
264 3e6j_A Variable lymphocyte rec 99.8 1.4E-19 4.8E-24 176.8 15.2 153 54-228 15-176 (229)
265 1ozn_A Reticulon 4 receptor; N 99.8 6E-19 2E-23 178.5 17.6 177 69-247 31-216 (285)
266 4fcg_A Uncharacterized protein 99.8 1.7E-19 5.7E-24 186.3 13.3 175 70-250 104-295 (328)
267 1zth_A RIO1 serine protein kin 99.8 8.7E-20 3E-24 181.6 10.4 138 362-515 51-219 (258)
268 2v70_A SLIT-2, SLIT homolog 2 99.8 5E-19 1.7E-23 171.7 13.9 112 72-183 34-146 (220)
269 2v9t_B SLIT homolog 2 protein 99.8 9E-19 3.1E-23 169.9 14.3 147 58-225 11-166 (220)
270 1ozn_A Reticulon 4 receptor; N 99.8 1.4E-18 4.8E-23 175.8 15.2 178 69-248 55-241 (285)
271 3zyi_A Leucine-rich repeat-con 99.8 1.7E-18 5.9E-23 187.2 15.9 187 60-247 56-257 (452)
272 2z66_A Variable lymphocyte rec 99.8 6E-19 2.1E-23 180.4 11.7 189 57-248 6-215 (306)
273 3rfs_A Internalin B, repeat mo 99.8 1.1E-18 3.8E-23 175.2 12.5 173 69-249 62-239 (272)
274 1p9a_G Platelet glycoprotein I 99.8 3.8E-18 1.3E-22 172.8 15.5 172 70-247 31-210 (290)
275 3v47_A TOLL-like receptor 5B a 99.8 8.1E-19 2.8E-23 190.0 10.0 150 56-206 6-168 (455)
276 3rfs_A Internalin B, repeat mo 99.8 8.2E-18 2.8E-22 168.9 16.5 174 70-249 41-222 (272)
277 2z62_A TOLL-like receptor 4, v 99.8 2E-18 6.7E-23 173.8 11.8 110 71-180 29-138 (276)
278 4eco_A Uncharacterized protein 99.8 5.5E-19 1.9E-23 199.1 8.4 176 69-249 205-419 (636)
279 3zyj_A Leucine-rich repeat-con 99.8 6.3E-18 2.2E-22 182.1 16.0 187 60-247 45-246 (440)
280 2z62_A TOLL-like receptor 4, v 99.8 4.8E-18 1.7E-22 170.9 13.9 179 69-249 51-241 (276)
281 2z66_A Variable lymphocyte rec 99.7 2.4E-18 8.3E-23 175.9 11.3 173 71-246 79-262 (306)
282 3oja_B Anopheles plasmodium-re 99.7 4.7E-18 1.6E-22 190.3 14.3 112 72-183 53-164 (597)
283 2xot_A Amphoterin-induced prot 99.7 1.5E-18 5E-23 181.9 9.5 173 58-248 18-205 (361)
284 2ft3_A Biglycan; proteoglycan, 99.7 2E-17 6.7E-22 171.3 17.6 185 58-248 33-233 (332)
285 1wwl_A Monocyte differentiatio 99.7 5E-19 1.7E-23 181.5 5.2 173 72-245 65-266 (312)
286 2v70_A SLIT-2, SLIT homolog 2 99.7 1.6E-17 5.3E-22 161.1 14.9 151 74-248 15-169 (220)
287 2z81_A CD282 antigen, TOLL-lik 99.7 3.5E-18 1.2E-22 189.7 10.9 188 57-247 3-211 (549)
288 2z80_A TOLL-like receptor 2, v 99.7 3.2E-18 1.1E-22 178.8 9.8 188 55-247 27-237 (353)
289 1xku_A Decorin; proteoglycan, 99.7 2.3E-17 8E-22 170.5 16.2 185 57-246 30-230 (330)
290 2xwt_C Thyrotropin receptor; s 99.7 9.2E-18 3.1E-22 165.1 12.5 175 70-248 31-221 (239)
291 2v9t_B SLIT homolog 2 protein 99.7 2.5E-17 8.7E-22 159.6 14.8 150 74-247 15-167 (220)
292 4glp_A Monocyte differentiatio 99.7 4.9E-18 1.7E-22 174.0 10.2 174 71-246 92-286 (310)
293 4ecn_A Leucine-rich repeat pro 99.7 3.2E-18 1.1E-22 196.8 9.2 173 69-247 447-659 (876)
294 2id5_A Lingo-1, leucine rich r 99.7 2.1E-17 7.3E-22 180.0 15.0 183 59-243 12-211 (477)
295 3vq2_A TLR4, TOLL-like recepto 99.7 7.8E-18 2.7E-22 189.2 11.8 174 69-244 31-216 (606)
296 3e6j_A Variable lymphocyte rec 99.7 4.3E-17 1.5E-21 159.0 15.2 160 60-249 14-176 (229)
297 4g8a_A TOLL-like receptor 4; l 99.7 1.1E-17 3.7E-22 188.8 11.8 143 70-233 52-195 (635)
298 3cvr_A Invasion plasmid antige 99.7 8.7E-18 3E-22 184.7 10.5 176 47-247 33-222 (571)
299 3m19_A Variable lymphocyte rec 99.7 5.2E-17 1.8E-21 161.0 14.9 156 70-227 35-195 (251)
300 3o6n_A APL1; leucine-rich repe 99.7 2.9E-17 1E-21 174.0 13.8 171 70-244 45-217 (390)
301 1wwl_A Monocyte differentiatio 99.7 4.3E-18 1.5E-22 174.6 6.9 175 70-247 95-289 (312)
302 3oja_A Leucine-rich immune mol 99.7 1.5E-17 5E-22 181.2 11.3 173 71-246 35-228 (487)
303 3j0a_A TOLL-like receptor 5; m 99.7 3.3E-17 1.1E-21 190.8 15.0 190 57-249 13-221 (844)
304 3zyi_A Leucine-rich repeat-con 99.7 5.8E-17 2E-21 175.2 15.7 173 69-245 98-279 (452)
305 1w8a_A SLIT protein; signaling 99.7 4.7E-17 1.6E-21 154.1 13.0 131 74-228 12-143 (192)
306 3zyj_A Leucine-rich repeat-con 99.7 6.3E-17 2.2E-21 174.3 15.6 173 70-246 88-269 (440)
307 3v47_A TOLL-like receptor 5B a 99.7 3.8E-17 1.3E-21 176.8 13.5 177 70-248 103-387 (455)
308 1ziw_A TOLL-like receptor 3; i 99.7 5.1E-17 1.8E-21 185.1 14.5 163 69-233 24-193 (680)
309 3t6q_A CD180 antigen; protein- 99.7 4.2E-17 1.4E-21 183.2 13.5 160 70-232 33-200 (606)
310 3a79_B TLR6, VLRB.59, TOLL-lik 99.7 4.5E-17 1.5E-21 181.2 13.6 154 91-249 350-514 (562)
311 2o6q_A Variable lymphocyte rec 99.7 2E-16 6.7E-21 158.6 16.3 156 70-227 61-221 (270)
312 1w8a_A SLIT protein; signaling 99.7 3.4E-17 1.2E-21 155.1 10.0 126 58-183 8-143 (192)
313 4b8c_D Glucose-repressible alc 99.7 3.4E-18 1.2E-22 194.8 3.3 195 26-247 131-356 (727)
314 2z7x_B TOLL-like receptor 1, v 99.7 3.1E-17 1.1E-21 180.7 10.7 152 91-247 321-483 (520)
315 2o6s_A Variable lymphocyte rec 99.7 1.4E-16 4.8E-21 153.0 13.7 166 73-247 10-180 (208)
316 3t6q_A CD180 antigen; protein- 99.7 1E-16 3.4E-21 180.1 14.6 176 70-247 325-515 (606)
317 3vq2_A TLR4, TOLL-like recepto 99.7 4.8E-17 1.6E-21 182.7 11.9 174 70-246 350-535 (606)
318 2z80_A TOLL-like receptor 2, v 99.7 4E-17 1.4E-21 170.4 10.3 133 69-204 75-210 (353)
319 1p9a_G Platelet glycoprotein I 99.7 2.2E-16 7.4E-21 159.9 15.1 171 69-247 9-187 (290)
320 3j0a_A TOLL-like receptor 5; m 99.7 3.3E-17 1.1E-21 190.8 9.9 85 71-155 291-375 (844)
321 2o6r_A Variable lymphocyte rec 99.7 1.3E-16 4.4E-21 149.0 11.1 126 58-183 7-141 (177)
322 4ezg_A Putative uncharacterize 99.7 1.7E-16 5.8E-21 151.0 11.3 149 70-244 44-193 (197)
323 2id5_A Lingo-1, leucine rich r 99.7 1.7E-16 5.8E-21 172.8 12.7 178 70-247 80-287 (477)
324 4gyi_A RIO2 kinase; protein ki 99.7 8E-17 2.7E-21 166.3 9.2 137 362-513 99-263 (397)
325 1ziw_A TOLL-like receptor 3; i 99.7 9.9E-17 3.4E-21 182.7 11.0 113 71-183 50-162 (680)
326 1xku_A Decorin; proteoglycan, 99.7 4.7E-16 1.6E-20 160.7 14.6 170 69-246 75-254 (330)
327 4glp_A Monocyte differentiatio 99.7 4.1E-17 1.4E-21 167.1 6.5 176 71-246 65-265 (310)
328 2ell_A Acidic leucine-rich nuc 99.7 1.6E-16 5.5E-21 147.0 9.5 139 70-229 24-164 (168)
329 3o53_A Protein LRIM1, AGAP0063 99.7 9.9E-17 3.4E-21 164.8 8.5 165 70-246 58-228 (317)
330 1h6u_A Internalin H; cell adhe 99.6 6.2E-16 2.1E-20 158.0 13.3 165 70-246 63-231 (308)
331 2z63_A TOLL-like receptor 4, v 99.6 4E-16 1.4E-20 173.8 12.4 177 70-249 347-535 (570)
332 2z63_A TOLL-like receptor 4, v 99.6 3.5E-16 1.2E-20 174.3 11.8 162 69-232 27-198 (570)
333 2ft3_A Biglycan; proteoglycan, 99.6 8.5E-16 2.9E-20 158.9 13.7 168 69-245 77-254 (332)
334 2je0_A Acidic leucine-rich nuc 99.6 1.9E-16 6.6E-21 143.3 7.0 131 70-220 17-149 (149)
335 2o6r_A Variable lymphocyte rec 99.6 2E-15 7E-20 140.8 14.0 132 73-228 10-141 (177)
336 3oja_B Anopheles plasmodium-re 99.6 8.2E-16 2.8E-20 172.1 13.1 173 70-247 75-247 (597)
337 2wfh_A SLIT homolog 2 protein 99.6 2.3E-15 7.8E-20 142.5 13.8 127 74-225 14-140 (193)
338 1h6u_A Internalin H; cell adhe 99.6 2.3E-15 7.8E-20 153.8 14.8 166 70-247 41-210 (308)
339 2z81_A CD282 antigen, TOLL-lik 99.6 3.3E-16 1.1E-20 173.7 9.1 175 69-245 49-236 (549)
340 2z7x_B TOLL-like receptor 1, v 99.6 7.5E-16 2.6E-20 169.6 11.7 155 69-228 323-485 (520)
341 2xot_A Amphoterin-induced prot 99.6 2.2E-15 7.6E-20 157.6 14.1 151 74-248 22-179 (361)
342 2wfh_A SLIT homolog 2 protein 99.6 1.3E-15 4.5E-20 144.2 11.1 122 58-180 10-140 (193)
343 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 1.3E-15 4.5E-20 169.3 12.9 155 69-228 352-514 (562)
344 3o6n_A APL1; leucine-rich repe 99.6 2E-15 6.7E-20 159.9 13.2 171 70-246 69-240 (390)
345 1jl5_A Outer protein YOPM; leu 99.6 5E-16 1.7E-20 167.4 8.1 164 71-245 12-228 (454)
346 3cvr_A Invasion plasmid antige 99.6 3E-15 1E-19 164.5 14.3 155 70-247 80-245 (571)
347 3oja_A Leucine-rich immune mol 99.6 6.6E-16 2.3E-20 168.1 8.2 109 70-183 99-208 (487)
348 1h6t_A Internalin B; cell adhe 99.6 3.6E-15 1.2E-19 151.0 12.8 163 71-246 47-214 (291)
349 4ay9_X Follicle-stimulating ho 99.6 2.2E-15 7.6E-20 156.9 11.4 189 58-247 9-217 (350)
350 4ezg_A Putative uncharacterize 99.6 3.2E-15 1.1E-19 142.1 10.9 130 70-225 66-195 (197)
351 3g06_A SSPH2 (leucine-rich rep 99.6 1.7E-15 5.8E-20 168.5 9.6 155 46-224 11-174 (622)
352 1o6v_A Internalin A; bacterial 99.6 6.1E-15 2.1E-19 159.9 13.7 165 71-246 200-389 (466)
353 3bz5_A Internalin-J, INLJ; leu 99.6 1.4E-14 4.7E-19 156.3 16.2 159 71-246 43-205 (457)
354 3bz5_A Internalin-J, INLJ; leu 99.6 1.7E-14 5.9E-19 155.5 16.7 140 70-225 64-205 (457)
355 1h6t_A Internalin B; cell adhe 99.6 6.7E-15 2.3E-19 149.0 12.3 145 70-226 68-215 (291)
356 1m9s_A Internalin B; cell inva 99.6 1.3E-14 4.4E-19 161.2 14.4 145 70-226 65-212 (605)
357 4b8c_D Glucose-repressible alc 99.6 5.5E-16 1.9E-20 176.6 3.4 112 69-184 223-334 (727)
358 1jl5_A Outer protein YOPM; leu 99.6 1.9E-14 6.6E-19 155.0 15.2 159 70-247 111-272 (454)
359 2je0_A Acidic leucine-rich nuc 99.6 5E-15 1.7E-19 133.9 8.7 123 92-237 15-142 (149)
360 2ell_A Acidic leucine-rich nuc 99.6 1E-14 3.4E-19 134.8 10.3 131 92-244 22-159 (168)
361 4fmz_A Internalin; leucine ric 99.6 1.8E-14 6.2E-19 149.8 13.3 169 69-249 154-328 (347)
362 1dce_A Protein (RAB geranylger 99.5 7.5E-15 2.6E-19 162.1 10.2 109 71-184 442-551 (567)
363 1m9s_A Internalin B; cell inva 99.5 1.3E-14 4.6E-19 161.1 12.2 166 69-247 42-212 (605)
364 4g8a_A TOLL-like receptor 4; l 99.5 1.4E-14 4.6E-19 163.4 12.0 176 71-249 398-584 (635)
365 3g39_A Variable lymphocyte rec 99.5 2.7E-14 9.1E-19 132.2 11.7 107 74-183 13-119 (170)
366 3o53_A Protein LRIM1, AGAP0063 99.5 5.1E-15 1.7E-19 152.0 7.2 158 70-235 99-262 (317)
367 1xeu_A Internalin C; cellular 99.5 2.7E-14 9.2E-19 142.2 11.4 142 70-224 41-185 (263)
368 1o6v_A Internalin A; bacterial 99.5 4.3E-14 1.5E-18 153.2 13.7 167 69-247 176-346 (466)
369 2ca6_A RAN GTPase-activating p 99.5 4.7E-16 1.6E-20 164.4 -2.4 41 91-131 91-135 (386)
370 2r9u_A Variable lymphocyte rec 99.5 5.3E-14 1.8E-18 130.7 11.8 106 73-181 15-120 (174)
371 4fmz_A Internalin; leucine ric 99.5 5.2E-14 1.8E-18 146.3 12.1 168 69-248 131-303 (347)
372 1a9n_A U2A', U2A'; complex (nu 99.5 1.9E-14 6.6E-19 134.1 7.6 132 70-224 19-153 (176)
373 2ca6_A RAN GTPase-activating p 99.5 1.7E-15 5.7E-20 160.2 -1.4 177 70-246 32-258 (386)
374 3goz_A Leucine-rich repeat-con 99.5 3.5E-15 1.2E-19 156.2 1.0 176 71-246 23-239 (362)
375 2ast_B S-phase kinase-associat 99.5 1.7E-15 5.7E-20 156.9 -1.4 170 70-242 70-257 (336)
376 2xwt_C Thyrotropin receptor; s 99.5 6E-14 2E-18 137.7 9.7 169 69-242 54-236 (239)
377 3g06_A SSPH2 (leucine-rich rep 99.5 2.5E-13 8.6E-18 151.1 15.5 53 71-131 62-114 (622)
378 1xeu_A Internalin C; cellular 99.5 8.3E-14 2.8E-18 138.7 10.2 161 71-246 20-186 (263)
379 1ds9_A Outer arm dynein; leuci 99.5 1.4E-16 4.8E-21 151.7 -9.7 134 71-229 19-158 (198)
380 3g39_A Variable lymphocyte rec 99.5 2.4E-13 8.1E-18 125.8 12.1 109 96-228 11-119 (170)
381 3goz_A Leucine-rich repeat-con 99.5 4.9E-15 1.7E-19 155.1 0.0 172 75-246 3-210 (362)
382 2ast_B S-phase kinase-associat 99.5 8.4E-15 2.9E-19 151.6 1.2 171 70-242 93-282 (336)
383 1dce_A Protein (RAB geranylger 99.4 2E-13 6.8E-18 150.7 11.8 107 96-228 443-550 (567)
384 2ifg_A High affinity nerve gro 99.4 1.9E-13 6.4E-18 142.1 11.0 108 58-180 8-117 (347)
385 2r9u_A Variable lymphocyte rec 99.4 5.9E-13 2E-17 123.5 12.3 106 97-226 15-120 (174)
386 1a9n_A U2A', U2A'; complex (nu 99.4 6.2E-13 2.1E-17 123.7 8.2 131 88-243 13-151 (176)
387 4ay9_X Follicle-stimulating ho 99.4 1.6E-12 5.3E-17 135.3 11.3 171 69-242 53-233 (350)
388 2ifg_A High affinity nerve gro 99.3 1.2E-11 4.1E-16 128.4 10.6 105 97-225 11-117 (347)
389 3tm0_A Aminoglycoside 3'-phosp 99.2 1.9E-11 6.4E-16 121.6 10.6 137 362-512 18-211 (263)
390 1z7x_W Ribonuclease inhibitor; 99.2 1.2E-13 4.2E-18 149.4 -5.9 177 70-246 3-213 (461)
391 1z7x_W Ribonuclease inhibitor; 99.2 2.4E-13 8.2E-18 147.1 -4.4 175 70-246 199-412 (461)
392 1ds9_A Outer arm dynein; leuci 99.2 1E-13 3.4E-18 131.8 -8.4 131 90-246 14-154 (198)
393 1nd4_A Aminoglycoside 3'-phosp 99.1 1.3E-10 4.6E-15 115.1 11.1 130 365-513 26-213 (264)
394 3dxp_A Putative acyl-COA dehyd 99.1 3E-10 1E-14 118.4 12.2 143 364-514 44-248 (359)
395 3sb4_A Hypothetical leucine ri 99.0 1.9E-09 6.5E-14 110.8 10.7 38 93-131 100-137 (329)
396 3un9_A NLR family member X1; l 98.9 4.2E-11 1.4E-15 125.1 -2.3 111 70-180 72-197 (372)
397 3sg8_A APH(2'')-ID; antibiotic 98.9 8.3E-10 2.8E-14 112.2 5.4 188 364-567 26-287 (304)
398 3rw6_A Nuclear RNA export fact 98.8 2E-10 6.8E-15 112.9 -1.3 127 56-184 76-238 (267)
399 3r70_A Aminoglycoside phosphot 98.7 1.4E-07 4.7E-12 96.4 12.7 130 364-513 43-236 (320)
400 3ogk_B Coronatine-insensitive 98.7 3.2E-09 1.1E-13 118.4 0.5 111 70-180 112-234 (592)
401 3rw6_A Nuclear RNA export fact 98.6 6.9E-09 2.3E-13 101.9 1.1 80 91-172 167-257 (267)
402 3un9_A NLR family member X1; l 98.6 6.9E-09 2.4E-13 108.2 1.2 137 70-206 101-253 (372)
403 3ogk_B Coronatine-insensitive 98.6 4.9E-09 1.7E-13 116.9 -1.3 167 71-240 139-326 (592)
404 3tdw_A Gentamicin resistance p 98.5 1.4E-06 5E-11 88.1 14.0 135 364-513 25-223 (306)
405 3d1u_A Putative fructosamine-3 98.4 4.8E-07 1.6E-11 90.6 9.5 75 364-448 21-98 (288)
406 4gkh_A Aminoglycoside 3'-phosp 98.4 9.9E-07 3.4E-11 87.6 11.5 135 364-513 30-222 (272)
407 1io0_A Tropomodulin; LRR prote 98.4 1.3E-08 4.3E-13 95.1 -3.5 92 88-179 30-136 (185)
408 2p1m_B Transport inhibitor res 98.3 1.2E-07 4.2E-12 105.5 2.6 107 70-176 105-221 (594)
409 1io0_A Tropomodulin; LRR prote 98.3 6.6E-08 2.3E-12 90.2 0.0 111 69-179 35-164 (185)
410 3sb4_A Hypothetical leucine ri 98.3 1E-06 3.4E-11 90.3 7.8 89 93-184 225-314 (329)
411 2p1m_B Transport inhibitor res 98.3 3.2E-08 1.1E-12 110.3 -3.9 154 70-225 338-520 (594)
412 3ats_A Putative uncharacterize 98.3 3.5E-06 1.2E-10 87.3 11.7 85 364-449 26-122 (357)
413 2ra8_A Uncharacterized protein 98.2 2.6E-07 8.9E-12 95.5 2.0 171 71-244 108-319 (362)
414 3ovc_A Hygromycin-B 4-O-kinase 98.2 3.4E-06 1.2E-10 87.4 10.5 74 364-448 47-122 (362)
415 2ra8_A Uncharacterized protein 98.2 5.4E-07 1.9E-11 93.1 3.4 154 70-226 139-322 (362)
416 4fdw_A Leucine rich hypothetic 98.1 1.5E-05 5.1E-10 83.8 12.0 143 72-224 137-284 (401)
417 4fdw_A Leucine rich hypothetic 98.0 3.7E-05 1.3E-09 80.7 13.0 167 72-245 159-358 (401)
418 2olc_A MTR kinase, methylthior 98.0 1.9E-05 6.5E-10 83.0 10.7 78 364-445 36-120 (397)
419 2q83_A YTAA protein; 2635576, 97.9 6.7E-05 2.3E-09 76.9 12.7 138 364-512 38-250 (346)
420 3jr1_A Putative fructosamine-3 97.9 7.5E-05 2.6E-09 75.3 12.3 136 364-510 42-232 (312)
421 3f7w_A Putative fructosamine-3 97.7 0.00014 4.7E-09 72.7 10.6 74 364-447 21-97 (288)
422 2pyw_A Uncharacterized protein 97.6 0.00031 1E-08 74.3 12.2 80 483-564 231-313 (420)
423 3e4g_A ATP synthase subunit S, 97.4 6.5E-05 2.2E-09 68.2 2.5 83 95-177 62-150 (176)
424 2ppq_A HSK, HK, homoserine kin 97.3 0.0012 3.9E-08 67.0 11.9 140 364-512 28-215 (322)
425 3csv_A Aminoglycoside phosphot 97.3 0.00061 2.1E-08 69.5 9.7 31 483-513 182-216 (333)
426 3dxq_A Choline/ethanolamine ki 97.2 0.0016 5.3E-08 65.4 11.3 70 364-447 24-95 (301)
427 1zyl_A Hypothetical protein YI 97.2 0.0051 1.8E-07 62.3 14.8 139 365-513 33-222 (328)
428 1nw1_A Choline kinase (49.2 KD 97.1 0.0016 5.3E-08 68.9 9.8 72 364-447 79-159 (429)
429 3e4g_A ATP synthase subunit S, 97.1 0.00015 5.1E-09 65.8 1.6 84 70-153 61-150 (176)
430 3feg_A Choline/ethanolamine ki 96.9 0.0044 1.5E-07 64.1 11.3 139 364-513 56-253 (379)
431 2qg7_A Ethanolamine kinase PV0 96.8 0.0064 2.2E-07 64.6 12.0 73 364-447 114-188 (458)
432 2yle_A Protein spire homolog 1 96.8 0.0043 1.5E-07 57.7 9.1 103 445-566 33-135 (229)
433 3rfe_A Platelet glycoprotein I 96.8 0.0021 7.3E-08 55.4 6.5 56 122-179 12-68 (130)
434 3rfe_A Platelet glycoprotein I 96.7 0.0023 7.7E-08 55.2 6.2 56 74-131 12-68 (130)
435 3c5i_A Choline kinase; choline 96.7 0.0029 9.8E-08 65.5 8.0 73 364-447 39-121 (369)
436 3i1a_A Spectinomycin phosphotr 96.7 0.0095 3.3E-07 60.7 11.5 30 484-513 206-235 (339)
437 4gt6_A Cell surface protein; l 96.4 0.0095 3.3E-07 62.1 9.5 110 89-223 260-369 (394)
438 1pgv_A TMD-1, tropomodulin TMD 96.1 0.0011 3.9E-08 61.2 0.5 110 69-178 40-169 (197)
439 4h09_A Hypothetical leucine ri 96.1 0.016 5.5E-07 59.9 9.3 109 72-185 219-327 (379)
440 4h09_A Hypothetical leucine ri 95.9 0.03 1E-06 57.8 10.5 94 87-184 210-303 (379)
441 4gt6_A Cell surface protein; l 95.9 0.018 6.2E-07 60.0 8.7 103 72-178 267-369 (394)
442 1pgv_A TMD-1, tropomodulin TMD 95.6 0.0051 1.7E-07 56.8 2.7 89 89-177 36-137 (197)
443 3f2s_A CK, chetk-alpha, cholin 95.6 0.044 1.5E-06 56.8 9.9 143 364-512 58-278 (401)
444 3mes_A Choline kinase; malaria 95.5 0.07 2.4E-06 55.8 11.4 138 364-513 76-290 (424)
445 4fs7_A Uncharacterized protein 95.3 0.059 2E-06 56.0 10.0 141 71-221 231-376 (394)
446 4fs7_A Uncharacterized protein 94.4 0.04 1.4E-06 57.3 5.8 107 71-185 254-360 (394)
447 3g15_A CK, chetk-alpha, cholin 93.3 0.22 7.5E-06 51.8 9.1 29 485-513 245-279 (401)
448 4ann_A ESSB; membrane protein, 91.7 0.62 2.1E-05 43.2 8.7 116 416-568 43-158 (215)
449 4ano_A ESSB; membrane protein, 86.6 1.9 6.5E-05 40.1 7.9 114 416-567 48-162 (219)
450 2ks1_B Epidermal growth factor 85.9 0.14 4.8E-06 34.0 -0.1 28 292-319 13-40 (44)
451 2l2t_A Receptor tyrosine-prote 83.7 0.17 5.7E-06 33.6 -0.5 28 292-319 12-39 (44)
452 3cxl_A N-chimerin; SH2, RHO-GA 81.3 0.21 7.1E-06 53.0 -1.2 61 364-429 148-215 (463)
453 2k1k_A Ephrin type-A receptor 60.6 1.6 5.4E-05 28.0 -0.3 13 295-307 15-27 (38)
454 2jwa_A Receptor tyrosine-prote 53.1 1.9 6.6E-05 28.4 -0.8 23 296-318 17-39 (44)
455 2k9y_A Ephrin type-A receptor 49.8 3 0.0001 27.1 -0.3 7 295-301 18-24 (41)
456 1cja_A Protein (actin-fragmin 23.7 2.8E+02 0.0095 27.3 8.7 75 435-513 157-236 (342)
457 3hhm_A Phosphatidylinositol-4, 22.9 3.3E+02 0.011 31.5 10.3 47 459-512 911-960 (1091)
458 2lz0_A Uncharacterized protein 22.6 1.5E+02 0.0051 23.2 5.5 38 112-150 14-51 (100)
No 1
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.8e-57 Score=461.98 Aligned_cols=264 Identities=21% Similarity=0.319 Sum_probs=213.1
Q ss_pred HHHHHHhhhcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEE
Q 006178 354 ELEVACEDFSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427 (658)
Q Consensus 354 ~l~~~~~~f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~ 427 (658)
|+..++..|.+.||+|+||+||+|++. +++.||||++.... .....++|.+|+.++++++|||||+++|+|
T Consensus 22 ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~---~~~~~~~f~~E~~il~~l~HpNIV~l~g~~ 98 (308)
T 4gt4_A 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA---EGPLREEFRHEAMLRARLQHPNVVCLLGVV 98 (308)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C---CC-CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc---ChHHHHHHHHHHHHHHhCCCCCCCCcceEE
Confidence 334445567789999999999999973 46789999985432 223456899999999999999999999999
Q ss_pred ecCCCCceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCC
Q 006178 428 RESSPFTRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493 (658)
Q Consensus 428 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp 493 (658)
.+.+ ..+||||||++|||.++|..+. ...++|.++.+|+.|||+||+|||++ +||||||||
T Consensus 99 ~~~~--~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~ 173 (308)
T 4gt4_A 99 TKDQ--PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLAT 173 (308)
T ss_dssp CSSS--SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred EECC--EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccc
Confidence 9877 6699999999999999996432 23589999999999999999999999 999999999
Q ss_pred cceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCC
Q 006178 494 SAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKG 572 (658)
Q Consensus 494 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~ 572 (658)
+|||+++++++||+|||+|+.+.............+++.|||||++.++.|+.++|||||||++|||+| |+.||.+...
T Consensus 174 ~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~ 253 (308)
T 4gt4_A 174 RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN 253 (308)
T ss_dssp GGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH
T ss_pred cceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999987754433333333445678999999999999999999999999999999 8999975442
Q ss_pred cHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 573 NLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
.+...... .....+.+..++..+.+|+.+||+.||++||||.||++.|+...+
T Consensus 254 --~~~~~~i~----------~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~n 306 (308)
T 4gt4_A 254 --QDVVEMIR----------NRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGN 306 (308)
T ss_dssp --HHHHHHHH----------TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCC
T ss_pred --HHHHHHHH----------cCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhccC
Confidence 12221111 111223344566778999999999999999999999999987643
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.9e-56 Score=453.86 Aligned_cols=256 Identities=20% Similarity=0.302 Sum_probs=207.4
Q ss_pred hcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 362 FSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+.+.||+|+||+||+|++. ++..||||++... .....++|.+|+++|++++|||||+++|+|.+.+ ..
T Consensus 17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~--~~ 90 (299)
T 4asz_A 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA----SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD--PL 90 (299)
T ss_dssp EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SE
T ss_pred EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC----ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC--EE
Confidence 4589999999999999874 3678999998432 2344678999999999999999999999999877 67
Q ss_pred EEEEEecCCCChhhhhccCC-----------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCc
Q 006178 436 MLVFDYASNGTLYEHLHYGE-----------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP 504 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~ 504 (658)
+||||||++|||.++|+..+ ...++|.++++|+.|||+||+|||++ +||||||||+|||+++++.+
T Consensus 91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcE
Confidence 99999999999999997532 34699999999999999999999999 99999999999999999999
Q ss_pred eeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhc
Q 006178 505 KLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLE 583 (658)
Q Consensus 505 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~ 583 (658)
||+|||+|+...............+++.|||||++.+..|+.++|||||||++|||+| |+.||...... +.......
T Consensus 168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~~i~~ 245 (299)
T 4asz_A 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EVIECITQ 245 (299)
T ss_dssp EECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHH
T ss_pred EECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHc
Confidence 9999999987654332222222335678999999999999999999999999999999 89999764322 22111111
Q ss_pred CCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 584 LPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
......|..+++++.+|+.+||+.||++||||+||++.|+++.+.
T Consensus 246 ----------~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 246 ----------GRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp ----------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----------CCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 111123344567789999999999999999999999999987653
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=9e-56 Score=455.14 Aligned_cols=257 Identities=18% Similarity=0.264 Sum_probs=202.1
Q ss_pred hcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 362 FSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+.++||+|+||+||+|+++ ++..||||++... .....++|.+|+++|++++|||||+++|+|.+.+ ..
T Consensus 45 l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~--~~ 118 (329)
T 4aoj_A 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREAELLTMLQHQHIVRFFGVCTEGR--PL 118 (329)
T ss_dssp EEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC----SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SE
T ss_pred EEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC----CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EE
Confidence 4588999999999999875 4678999998432 2344578999999999999999999999999877 67
Q ss_pred EEEEEecCCCChhhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC
Q 006178 436 MLVFDYASNGTLYEHLHYGE-------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~ 502 (658)
+||||||++|+|.++++... ..+++|.++++|+.|||+||+|||++ +||||||||+|||+++++
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTT
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCC
Confidence 99999999999999997532 23699999999999999999999999 999999999999999999
Q ss_pred CceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHh
Q 006178 503 SPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDY 581 (658)
Q Consensus 503 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~ 581 (658)
.+||+|||+|+.+.............+++.|||||++.+..|+.++|||||||++|||+| |+.||...... +.....
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~~i 273 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT--EAIDCI 273 (329)
T ss_dssp EEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH--HHHHHH
T ss_pred cEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH--HHHHHH
Confidence 999999999987654333333333445678999999999999999999999999999999 89999754321 111111
Q ss_pred hcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 582 LELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
... .....+..+++++.+|+.+||+.||++||||.||++.|+.+.+.+
T Consensus 274 ~~g----------~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 274 TQG----------RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp HHT----------CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred HcC----------CCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 111 111233345577899999999999999999999999999987654
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=4.4e-55 Score=443.68 Aligned_cols=260 Identities=23% Similarity=0.341 Sum_probs=203.4
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
|.+.||+|+||+||+|++++ .||||.+.... ......+.|.+|++++++++|||||+++|++.++ ..+|||||
T Consensus 40 l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~--~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~---~~~iVmEy 112 (307)
T 3omv_A 40 LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVD--PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD---NLAIVTQW 112 (307)
T ss_dssp EEEECCCCSSSEEEEEESSS--EEEEEECCCSS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEEEC
T ss_pred EeeEEeeCCCcEEEEEEECC--cEEEEEEEecC--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECC---eEEEEEEc
Confidence 56899999999999999764 58999875332 2234457899999999999999999999998653 46999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
|++|+|.++++.... .++|.++..|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+|+........
T Consensus 113 ~~gGsL~~~l~~~~~-~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 113 CEGSSLYKHLHVQET-KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CSSCBHHHHHHTSCC-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred CCCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 999999999975433 599999999999999999999999 9999999999999999999999999999876433322
Q ss_pred CCCcccccCccccCCccccc---CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 522 NPGTLGSQGAICILPSSLEA---RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~---~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
.......+++.|||||++.+ +.|+.++|||||||++|||+||+.||........ +...... ....|....
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~--~~~~~~~-----~~~~p~~~~ 261 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ--IIFMVGR-----GYASPDLSK 261 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH--HHHHHHT-----TCCCCCSTT
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH--HHHHHhc-----CCCCCCccc
Confidence 22333456788999999864 4699999999999999999999999975433211 1111111 112233333
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
.+..++..+.+|+.+||+.||++||||.||++.|+.+....
T Consensus 262 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 262 LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp SCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 44556678899999999999999999999999998876543
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.3e-53 Score=438.97 Aligned_cols=250 Identities=17% Similarity=0.199 Sum_probs=199.2
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||+||+|++. +|+.||||++..... .....+.+.+|+++|++++|||||++++++.+.+ ..||||
T Consensus 27 ~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~--~~yiVm 102 (350)
T 4b9d_A 27 VRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM--SSKEREESRREVAVLANMKHPNIVQYRESFEENG--SLYIVM 102 (350)
T ss_dssp EEEEEC------CEEEEEETTTCCEEEEEEEECTTS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred EEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC--CHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECC--EEEEEE
Confidence 34488999999999999986 688999999865432 2334568999999999999999999999999887 889999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
|||++|+|.+++...+...+++.+++.|+.||+.||+|||++ +||||||||+|||+++++.+||+|||+|+.+....
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence 999999999999866655689999999999999999999999 99999999999999999999999999998754321
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.. .....+++.|||||++.+..|+.++|||||||++|||+||+.||.... ..+........ .....
T Consensus 180 ~~--~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~--~~~~~~~i~~~----------~~~~~ 245 (350)
T 4b9d_A 180 EL--ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS--MKNLVLKIISG----------SFPPV 245 (350)
T ss_dssp HH--HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHT----------CCCCC
T ss_pred cc--ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHHHHHHcC----------CCCCC
Confidence 11 112346778999999999999999999999999999999999997543 22222222211 11112
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+.++.+|+.+||+.||++|||++|+++.
T Consensus 246 ~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 246 SLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 23344678899999999999999999999863
No 6
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.7e-53 Score=440.16 Aligned_cols=261 Identities=20% Similarity=0.247 Sum_probs=206.3
Q ss_pred hhhcccccCCCCeeEEEEEecC------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccC-CCccceeeEEecCCC
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINH-ENTGKLLGYCRESSP 432 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~ 432 (658)
..+.+.||+|+||+||+|++.+ ++.||||++.... .....+.|.+|+++|.+++| ||||+++|+|.+.+.
T Consensus 66 ~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~---~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~ 142 (353)
T 4ase_A 66 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 142 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred eEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc---ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC
Confidence 3445899999999999999753 2468888874322 22345679999999999955 999999999976532
Q ss_pred CceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL 498 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl 498 (658)
..+||||||++|+|.++|+... +..+++.++..|+.|||+||+|||++ +||||||||+|||+
T Consensus 143 -~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NILl 218 (353)
T 4ase_A 143 -PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILL 218 (353)
T ss_dssp -CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred -EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccceee
Confidence 4699999999999999997532 23589999999999999999999999 99999999999999
Q ss_pred cCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc--HH
Q 006178 499 TEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN--LV 575 (658)
Q Consensus 499 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~--~~ 575 (658)
++++.+||+|||+|+.+.............+++.|||||++.+..|+.++|||||||++|||+| |+.||.+.... +.
T Consensus 219 ~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~ 298 (353)
T 4ase_A 219 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 298 (353)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHH
T ss_pred CCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 9999999999999987643332222222345677999999999999999999999999999998 99999764432 11
Q ss_pred HHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCc
Q 006178 576 DWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640 (658)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 640 (658)
..+.... ....+..+++++.+++.+||+.||++|||+.||+++|+++++...
T Consensus 299 ~~i~~g~-------------~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~ 350 (353)
T 4ase_A 299 RRLKEGT-------------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 350 (353)
T ss_dssp HHHHHTC-------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred HHHHcCC-------------CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhh
Confidence 1111110 112233345678899999999999999999999999999876443
No 7
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.7e-51 Score=414.30 Aligned_cols=249 Identities=21% Similarity=0.239 Sum_probs=194.6
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecC--CCCceEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES--SPFTRMLV 438 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~~~lv 438 (658)
|.++||+|+||+||+|++. ++..||+|++..... .....+.|.+|++++++++|||||++++++.+. +....+||
T Consensus 30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL--TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 4578999999999999986 577899998864432 233456799999999999999999999998652 11257999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC-CCCceeccccchhhhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKLVDFDSWKTILA 517 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla~~~~~ 517 (658)
||||++|+|.+++++.. .+++..+..|+.||+.||+|||++ +++||||||||+|||++. ++.+||+|||+|+....
T Consensus 108 mEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 99999999999998654 599999999999999999999998 123999999999999984 78999999999975321
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
.......+++.|||||++.+ .|+.++|||||||++|||+||+.||..... ............ ....
T Consensus 185 ----~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~-~~~~~~~i~~~~--~~~~------ 250 (290)
T 3fpq_A 185 ----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-AAQIYRRVTSGV--KPAS------ 250 (290)
T ss_dssp ----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-HHHHHHHHTTTC--CCGG------
T ss_pred ----CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-HHHHHHHHHcCC--CCCC------
Confidence 12233456788999998864 699999999999999999999999965432 222222221110 0000
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.+...++++.+|+.+||+.||++|||++|+++
T Consensus 251 -~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 251 -FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11112346789999999999999999999976
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.6e-52 Score=428.83 Aligned_cols=248 Identities=16% Similarity=0.170 Sum_probs=199.6
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.++||+|+||.||+|++. +|+.||||++..... ..+|+.++++++|||||++++++.+.+ ..||||||
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---------~~~E~~il~~l~HpnIV~l~~~~~~~~--~~~ivmEy 131 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---------RVEELVACAGLSSPRIVPLYGAVREGP--WVNIFMEL 131 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---------CTHHHHTTTTCCCTTBCCEEEEEEETT--EEEEEECC
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh---------HHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEec
Confidence 478999999999999986 578999999853221 246999999999999999999999887 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC-CceeccccchhhhhhcCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKLVDFDSWKTILARSE 520 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~~~~~~ 520 (658)
|++|+|.++++..+ .+++.++..|+.||+.||+|||++ +||||||||+|||++.++ .+||+|||+|+.+.....
T Consensus 132 ~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~ 206 (336)
T 4g3f_A 132 LEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206 (336)
T ss_dssp CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred cCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc
Confidence 99999999998654 499999999999999999999999 999999999999999987 699999999987643321
Q ss_pred CC---CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCCcccccccCCcC
Q 006178 521 KN---PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 521 ~~---~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
.. ......+++.|||||++.+..|+.++|||||||++|||+||+.||..... .+...+.. .+. ..
T Consensus 207 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~---~~~--------~~ 275 (336)
T 4g3f_A 207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIAS---EPP--------PI 275 (336)
T ss_dssp -------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHH---SCC--------GG
T ss_pred ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHc---CCC--------Cc
Confidence 11 11223467889999999999999999999999999999999999975432 22211111 111 11
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
...++..+..+.+++.+||+.||++|||+.|+++.|.....
T Consensus 276 ~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~ 316 (336)
T 4g3f_A 276 REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ 316 (336)
T ss_dssp GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 12233445678899999999999999999999999887653
No 9
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=6.6e-52 Score=425.58 Aligned_cols=245 Identities=16% Similarity=0.242 Sum_probs=199.9
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||+||+|++. +|+.||||++...... ..+.+.+|+++|++++|||||++++++.+.+ ..||||||
T Consensus 79 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--~~~ivmEy 152 (346)
T 4fih_A 79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEF 152 (346)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS----SGGGGHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEECC
T ss_pred eEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh----HHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEeC
Confidence 478999999999999986 6889999998644322 2345789999999999999999999999888 88999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
|++|+|.+++... .+++.++..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+......
T Consensus 153 ~~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 226 (346)
T 4fih_A 153 LEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 226 (346)
T ss_dssp CTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC
T ss_pred CCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCc
Confidence 9999999999753 499999999999999999999999 9999999999999999999999999999876433222
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
.....+++.|||||++.+..|+.++|||||||++|||+||+.||..... .+........ ..+.. ....
T Consensus 227 --~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~-------~~~~~-~~~~ 294 (346)
T 4fih_A 227 --RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDN-------LPPRL-KNLH 294 (346)
T ss_dssp --BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHS-------SCCCC-SCGG
T ss_pred --ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHcC-------CCCCC-Cccc
Confidence 2233467889999999999999999999999999999999999975432 1111111111 01111 1122
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..++++.+|+.+||+.||++|||+.|+++.
T Consensus 295 ~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 295 KVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 344678899999999999999999999874
No 10
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=4.4e-52 Score=420.47 Aligned_cols=250 Identities=20% Similarity=0.217 Sum_probs=204.4
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+++.+.||+|+||+||+|++. +++.||+|.+..... ......+.+.+|+++|++++|||||++++++.+.+ ..|+|
T Consensus 34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~-~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~yiv 110 (311)
T 4aw0_A 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE--KLYFG 110 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEE
Confidence 344589999999999999986 678999998854321 12233567999999999999999999999999887 88999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
||||++|+|.+++.+.+ .+++.++..|+.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+.+...
T Consensus 111 mEy~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp ECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence 99999999999998654 499999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
..........+++.|||||++.+..|+.++||||+||++|||+||+.||.... ..+.......... .
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~~i~~~~~-----------~ 252 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--EGLIFAKIIKLEY-----------D 252 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHTCC-----------C
T ss_pred CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHcCCC-----------C
Confidence 33333333456788999999999999999999999999999999999997543 2222222222111 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
++...++++.+|+.+||+.||++|||++|++.
T Consensus 253 ~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 253 FPEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp CCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred CCcccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence 22233456889999999999999999998743
No 11
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1e-51 Score=421.96 Aligned_cols=262 Identities=18% Similarity=0.244 Sum_probs=197.5
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC--CceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP--FTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~--~~~~lv~ 439 (658)
+.+.||+|+||+||+|++ +|+.||||++.... .....+.+|+..+.+++|||||+++|++.+++. ...+|||
T Consensus 7 L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~-----~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 7 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp EEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred EEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc-----hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 357899999999999998 57899999884321 112233456666678899999999999986542 2479999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-----GPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-----~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
|||++|+|.++++.. .++|..+.+|+.|+++||+|||+++ .++||||||||+|||+|+++++||+|||+|+.
T Consensus 81 Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 157 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp ECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred cCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence 999999999999854 4899999999999999999999763 45899999999999999999999999999987
Q ss_pred hhhcCCC--CCCcccccCccccCCcccccC------CCCccccchhhHHHHHHHHhCCCCCCCCCC-------------c
Q 006178 515 ILARSEK--NPGTLGSQGAICILPSSLEAR------HLDVQGNIYAFGVLLLEIISGRPPCCKDKG-------------N 573 (658)
Q Consensus 515 ~~~~~~~--~~~~~~~~~~~~~aPE~~~~~------~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-------------~ 573 (658)
....... .......+++.|||||++.+. .++.++|||||||++|||+||++||..... .
T Consensus 158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~ 237 (303)
T 3hmm_A 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237 (303)
T ss_dssp EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence 6433221 111223467889999998764 478899999999999999999887642211 1
Q ss_pred HHHHHHHhhcCCcccccccCCcCCC--CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 574 LVDWAKDYLELPEVMSYVVDPELKH--FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
......... ....+|.+.. .+.+.+..+.+|+.+||+.||++||||.||++.|+++.+.
T Consensus 238 ~~~~~~~~~------~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 238 VEEMRKVVC------EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHHT------TSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHh------cccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 111111111 1112222221 1235667899999999999999999999999999987653
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.1e-50 Score=426.80 Aligned_cols=245 Identities=17% Similarity=0.239 Sum_probs=199.7
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|++. +|+.||||++...... ..+.+.+|+.+|++++|||||++++++.+.+ ..||||||
T Consensus 156 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--~~~iVmEy 229 (423)
T 4fie_A 156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEF 229 (423)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS----SGGGHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred eeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh----HHHHHHHHHHHHHhCCCCCCCceEEEEEECC--EEEEEEeC
Confidence 478999999999999986 5889999998644322 2345889999999999999999999999887 88999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
|++|+|.++++.. .+++.++..|+.||+.||+|||++ +||||||||+||||+.++.+||+|||+|+.+......
T Consensus 230 ~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~ 303 (423)
T 4fie_A 230 LEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 303 (423)
T ss_dssp CTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC
T ss_pred CCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCcc
Confidence 9999999999754 499999999999999999999999 9999999999999999999999999999876433222
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
.....+++.|||||++.+..|+.++|||||||++|||++|+.||.+.... +........ ..+.+. ...
T Consensus 304 --~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~i~~~-------~~~~~~-~~~ 371 (423)
T 4fie_A 304 --RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDN-------LPPRLK-NLH 371 (423)
T ss_dssp --BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHS-------CCCCCS-CTT
T ss_pred --ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHHHcC-------CCCCCc-ccc
Confidence 22334677899999999999999999999999999999999999754321 111111111 011111 112
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+.++.+|+.+||+.||++|||+.|+++.
T Consensus 372 ~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 372 KVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp SSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 234668899999999999999999999874
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2e-50 Score=402.96 Aligned_cols=247 Identities=14% Similarity=0.169 Sum_probs=189.6
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||+||+|++. +++.||+|.+...... .....+.+.+|++++++++|||||++++++.+.+ ..|+|
T Consensus 15 Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~iv 91 (275)
T 3hyh_A 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLA-KSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD--EIIMV 91 (275)
T ss_dssp CEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcC-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EEEEE
Confidence 445589999999999999975 6889999988644322 2234567999999999999999999999999887 88999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||+ +|+|.+++.+++ .+++.++..++.||+.||+|||++ +|+||||||+|||+++++++||+|||+|+.....
T Consensus 92 mEy~-~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp EECC-CEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred EeCC-CCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 9999 689999998654 499999999999999999999999 9999999999999999999999999999875432
Q ss_pred CCCCCCcccccCccccCCcccccCCC-CccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHL-DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
. ......+++.|||||++.+..+ +.++||||+||++|||+||+.||.... .............
T Consensus 166 ~---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~--~~~~~~~i~~~~~----------- 229 (275)
T 3hyh_A 166 N---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--IPVLFKNISNGVY----------- 229 (275)
T ss_dssp ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHTCC-----------
T ss_pred C---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHHcCCC-----------
Confidence 2 1222346788999999998876 589999999999999999999997543 2222222222111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.++...++++.+|+.+||+.||++|||++|+++.
T Consensus 230 ~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 230 TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 1122234668899999999999999999999873
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.4e-50 Score=409.72 Aligned_cols=242 Identities=16% Similarity=0.134 Sum_probs=189.0
Q ss_pred hhhcccccCCCCeeEEEEEec----CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+++.+.||+|+||+||+|+.. .++.||+|.+....... ....++.+|++++++++|||||++++++.+++ ..
T Consensus 26 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~ 101 (304)
T 3ubd_A 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV--RDRVRTKMERDILVEVNHPFIVKLHYAFQTEG--KL 101 (304)
T ss_dssp EEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE--EECC------CCCCCCCCTTEECEEEEEEETT--EE
T ss_pred cEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh--HHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EE
Confidence 344589999999999999863 36789999886443221 12235889999999999999999999999887 88
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
|+|||||++|+|.+++.+.+ .+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+..
T Consensus 102 ~ivmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EEEECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 99999999999999998654 499999999999999999999999 9999999999999999999999999999865
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
...... .....+++.|||||++.+..|+.++||||+||++|||+||+.||..... .+..........
T Consensus 177 ~~~~~~--~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--~~~~~~i~~~~~--------- 243 (304)
T 3ubd_A 177 IDHEKK--AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR--KETMTMILKAKL--------- 243 (304)
T ss_dssp ----CC--CCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCC---------
T ss_pred cCCCcc--ccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH--HHHHHHHHcCCC---------
Confidence 433222 2223467889999999999999999999999999999999999975432 222222222111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSM 625 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~ 625 (658)
.++...++++.+|+.+||+.||++|||+
T Consensus 244 --~~p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 244 --GMPQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred --CCCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 1222344668899999999999999985
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.7e-49 Score=402.01 Aligned_cols=249 Identities=15% Similarity=0.215 Sum_probs=185.9
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC--------
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP-------- 432 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-------- 432 (658)
+.+.||+|+||+||+|++. +++.||||++.... .....+.+.+|+++|++++|||||++++++.+.+.
T Consensus 9 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 9 PIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp EEEEEEECC--EEEEEEETTTCCEEEEEEEEECS---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred EeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence 3489999999999999976 68899999986443 23345679999999999999999999999875442
Q ss_pred --CceEEEEEecCCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccc
Q 006178 433 --FTRMLVFDYASNGTLYEHLHYGER-CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDF 509 (658)
Q Consensus 433 --~~~~lv~E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DF 509 (658)
.+.|+|||||++|+|.+++..... ...++..++.|+.||++||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~DF 162 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDF 162 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC
T ss_pred CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEccC
Confidence 136899999999999999986543 3456778899999999999999999 9999999999999999999999999
Q ss_pred cchhhhhhcCCCCC----------CcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHH
Q 006178 510 DSWKTILARSEKNP----------GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK 579 (658)
Q Consensus 510 Gla~~~~~~~~~~~----------~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~ 579 (658)
|+|+.+........ .....+++.|||||++.+..|+.++|||||||++|||++ ||....... ....
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~-~~~~ 238 (299)
T 4g31_A 163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERV-RTLT 238 (299)
T ss_dssp CCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHH-HHHH
T ss_pred ccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHH-HHHH
Confidence 99987654322111 112346788999999999999999999999999999996 775321111 1111
Q ss_pred HhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 580 DYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.. .............+...+|+.+||+.||++|||+.|+++
T Consensus 239 ~~----------~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 239 DV----------RNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HH----------HTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HH----------hcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11 111111112233455778999999999999999999987
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.3e-47 Score=398.77 Aligned_cols=263 Identities=14% Similarity=0.135 Sum_probs=196.6
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC----CCce
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTR 435 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----~~~~ 435 (658)
.+.+.||+|+||+||+|++. +|+.||||++..... .....+.+.+|+++|++++|||||++++++.... ....
T Consensus 57 ~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~ 134 (398)
T 4b99_A 57 EIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD--VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV 134 (398)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCE
T ss_pred EEEEEEecccCeEEEEEEECCCCCEEEEEEECcccc--chHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEE
Confidence 34589999999999999986 688999999853322 2334567889999999999999999999986432 1268
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
|||||||+ |+|.+++...+ .+++.++..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+
T Consensus 135 ~ivmE~~~-g~L~~~i~~~~--~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 135 YVVLDLME-SDLHQIIHSSQ--PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EEEEECCS-EEHHHHHTSSS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEeCCC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 99999995 68999997654 599999999999999999999999 9999999999999999999999999999876
Q ss_pred hhcCC--CCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCC-ccccc
Q 006178 516 LARSE--KNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELP-EVMSY 590 (658)
Q Consensus 516 ~~~~~--~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~-~~~~~ 590 (658)
..... ........++..|||||++.+. .++.++||||+||++|||+||++||.+.... ....+......+ .....
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~ 288 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ 288 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence 43221 1122234567889999998875 5699999999999999999999999765421 111111111111 00000
Q ss_pred cc-----------CCcCCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 591 VV-----------DPELKHFS-----YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 591 ~~-----------~~~~~~~~-----~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. -+.....+ +..+.++.+|+.+||+.||++|||+.|++++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 289 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp -----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00 00000111 1224568899999999999999999999875
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4.4e-46 Score=388.74 Aligned_cols=255 Identities=16% Similarity=0.178 Sum_probs=190.8
Q ss_pred hhcccccCCCCeeEEEEEec----CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCce
Q 006178 361 DFSNIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~ 435 (658)
.+.+.||+|+||+||+|+++ .++.||+|++.... ...++.+|+++|+++ +|||||++++++.+.+ +.
T Consensus 24 ~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~------~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~--~~ 95 (361)
T 4f9c_A 24 KIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS------HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND--HV 95 (361)
T ss_dssp EEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS------CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT--EE
T ss_pred EEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc------CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC--EE
Confidence 34589999999999999864 35789999874332 234678999999998 7999999999999887 88
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC-CCceeccccchhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKLVDFDSWKT 514 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~~ 514 (658)
|+||||+++|+|.++++ .+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.
T Consensus 96 ~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~ 167 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQG 167 (361)
T ss_dssp EEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence 99999999999999984 489999999999999999999999 99999999999999977 7999999999975
Q ss_pred hhhcCCC--------------------------CCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCC
Q 006178 515 ILARSEK--------------------------NPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPC 567 (658)
Q Consensus 515 ~~~~~~~--------------------------~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~ 567 (658)
....... .......+++.|+|||++.+. .|+.++||||+||++|||+||+.||
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf 247 (361)
T 4f9c_A 168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247 (361)
T ss_dssp CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence 4321100 001122467789999999875 5899999999999999999999999
Q ss_pred CCCCCcHHHHHHHh--hc----------CCcc-----------ccc---------ccCCcCC----------CCCHHHHH
Q 006178 568 CKDKGNLVDWAKDY--LE----------LPEV-----------MSY---------VVDPELK----------HFSYDDLK 605 (658)
Q Consensus 568 ~~~~~~~~~~~~~~--~~----------~~~~-----------~~~---------~~~~~~~----------~~~~~~~~ 605 (658)
.....+........ .. .... ... ...+... ......++
T Consensus 248 ~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~ 327 (361)
T 4f9c_A 248 YKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPD 327 (361)
T ss_dssp SCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCH
T ss_pred CCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCH
Confidence 75544322211100 00 0000 000 0000000 00112345
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 606 VICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 606 ~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
++.+|+.+||+.||++|||++|++++
T Consensus 328 ~a~DLl~~lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 328 EAYDLLDKLLDLNPASRITAEEALLH 353 (361)
T ss_dssp HHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 68899999999999999999998863
No 18
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.7e-44 Score=371.21 Aligned_cols=284 Identities=25% Similarity=0.428 Sum_probs=230.9
Q ss_pred cccccHHHHHHHHhhhc--------ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCC
Q 006178 347 VVRFSRQELEVACEDFS--------NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE 418 (658)
Q Consensus 347 ~~~~~~~~l~~~~~~f~--------~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~ 418 (658)
...|++.++..++.+|. +.||+|+||.||+|+. +++.+|+|++............+.+.+|+.++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 45799999999999997 4699999999999997 56889999986544333344567899999999999999
Q ss_pred CccceeeEEecCCCCceEEEEEecCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCccee
Q 006178 419 NTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVY 497 (658)
Q Consensus 419 nIv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NIL 497 (658)
||+++++++.+.+ ..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+
T Consensus 91 ~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil 165 (307)
T 2nru_A 91 NLVELLGFSSDGD--DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANIL 165 (307)
T ss_dssp TBCCEEEEECSSS--SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CeEEEEEEEecCC--ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEE
Confidence 9999999998877 6799999999999999987432 34699999999999999999999999 9999999999999
Q ss_pred ecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC--cHH
Q 006178 498 LTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG--NLV 575 (658)
Q Consensus 498 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~--~~~ 575 (658)
+++++.+||+|||+++...............++..|+|||.+.+ .++.++||||||+++|||+||+.||..... ...
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 244 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTT
T ss_pred EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHH
Confidence 99999999999999876533222111222335677999998764 589999999999999999999999975432 223
Q ss_pred HHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 576 DWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
.+..........+...+++.+...+...+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 245 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 33333333334445556666666788889999999999999999999999999999998754
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.8e-45 Score=403.96 Aligned_cols=246 Identities=15% Similarity=0.133 Sum_probs=193.6
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccc--cchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH--WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~--~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.++||+|+||+||+|++. +|+.||+|++...... ..........+++.+++.++|||||++++++.+.+ ..|+||
T Consensus 194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~--~lylVm 271 (689)
T 3v5w_A 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD--KLSFIL 271 (689)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC--EEEEEE
Confidence 389999999999999986 5789999988644311 11111122334567777889999999999999988 889999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
|||+||+|.++|.+.+ .+++..+..|+.||+.||+|||++ +||||||||+||||+.+|.+||+|||+|+.+....
T Consensus 272 Ey~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~ 346 (689)
T 3v5w_A 272 DLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 346 (689)
T ss_dssp CCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCC
T ss_pred ecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecCCCC
Confidence 9999999999998654 499999999999999999999999 99999999999999999999999999998754221
Q ss_pred CCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCCcccccccCCcCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
.....+++.|||||++.. ..|+.++||||+||++|||+||+.||..... +.............
T Consensus 347 ----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~----------- 411 (689)
T 3v5w_A 347 ----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV----------- 411 (689)
T ss_dssp ----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCC-----------
T ss_pred ----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC-----------
Confidence 223356788999999975 5799999999999999999999999975332 22222222222111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPS-----MQELCT 630 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs-----~~evl~ 630 (658)
.++...+.++.+|+.+||+.||++|++ ++||.+
T Consensus 412 ~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 412 ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp CCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred CCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 122234466889999999999999998 677764
No 20
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.5e-45 Score=378.89 Aligned_cols=273 Identities=27% Similarity=0.462 Sum_probs=220.3
Q ss_pred HHHhhhc--ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCc
Q 006178 357 VACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFT 434 (658)
Q Consensus 357 ~~~~~f~--~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 434 (658)
..+.+|. +.||+|+||.||+|++++++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+ .
T Consensus 36 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~ 109 (321)
T 2qkw_B 36 EATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES----SQGIEEFETEIETLSFCRHPHLVSLIGFCDERN--E 109 (321)
T ss_dssp CCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC----SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT--C
T ss_pred HHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC----hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC--e
Confidence 3344443 7899999999999999889999999875432 223567899999999999999999999998877 6
Q ss_pred eEEEEEecCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccch
Q 006178 435 RMLVFDYASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSW 512 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 512 (658)
.++||||+++|+|.+++.... ...+++.++..++.|+++||+|||++ +|+||||||+||++++++.+||+|||++
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 186 (321)
T 2qkw_B 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGIS 186 (321)
T ss_dssp CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTC
T ss_pred EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccc
Confidence 799999999999999997543 23589999999999999999999999 9999999999999999999999999998
Q ss_pred hhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCC----CcHHHHHHHhhcCCccc
Q 006178 513 KTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDK----GNLVDWAKDYLELPEVM 588 (658)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~----~~~~~~~~~~~~~~~~~ 588 (658)
+...............++..|+|||.+.+..++.++|||||||++|||+||+.||.... .....|....... ...
T Consensus 187 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~ 265 (321)
T 2qkw_B 187 KKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN-GQL 265 (321)
T ss_dssp EECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTT-TCC
T ss_pred cccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccc-ccH
Confidence 76432222222222334667999999999999999999999999999999999996432 2344444333222 233
Q ss_pred ccccCCcCC-CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 589 SYVVDPELK-HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 589 ~~~~~~~~~-~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
....++... ..+...+..+.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp CSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred HHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 444454443 456788899999999999999999999999999999887543
No 21
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.1e-44 Score=376.05 Aligned_cols=283 Identities=31% Similarity=0.521 Sum_probs=230.1
Q ss_pred ccccccHHHHHHHHhhhc--ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccce
Q 006178 346 DVVRFSRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKL 423 (658)
Q Consensus 346 ~~~~~~~~~l~~~~~~f~--~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l 423 (658)
....|++.++...+.+|. +.||+|+||.||+|+..+++.||+|++...... .....+.+|++++++++||||+++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~ 92 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ---GGELQFQTEVEMISMAVHRNLLRL 92 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC--------CCCHHHHHHHGGGTCCCTTBCCC
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc---hHHHHHHHHHHHHHhccCCCccce
Confidence 456789999999988886 899999999999999888999999998543321 112358899999999999999999
Q ss_pred eeEEecCCCCceEEEEEecCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC
Q 006178 424 LGYCRESSPFTRMLVFDYASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED 501 (658)
Q Consensus 424 ~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~ 501 (658)
++++.+.+ ..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+++.++|+||||||+|||++++
T Consensus 93 ~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~ 170 (326)
T 3uim_A 93 RGFCMTPT--ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE 170 (326)
T ss_dssp CEEECCSS--CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTT
T ss_pred EEEEecCC--ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCC
Confidence 99998877 6799999999999999998653 2359999999999999999999999877899999999999999999
Q ss_pred CCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCC------CCCCcHH
Q 006178 502 FSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCC------KDKGNLV 575 (658)
Q Consensus 502 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~------~~~~~~~ 575 (658)
+.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||+||+.||. .......
T Consensus 171 ~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 249 (326)
T 3uim_A 171 FEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249 (326)
T ss_dssp CCEEECCCSSCEECCSSSSC-EECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHH
T ss_pred CCEEeccCccccccCccccc-ccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHH
Confidence 99999999999765322211 1112235677999999998899999999999999999999999995 2233455
Q ss_pred HHHHHhhcCCcccccccCCcCC-CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 576 DWAKDYLELPEVMSYVVDPELK-HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
.|....... .......+.... ..+...+..+.+++.+||+.||++|||+.||+++|++.
T Consensus 250 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 250 DWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp HHHTTTTSS-CCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHhhc-hhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 555444333 233344444433 45778889999999999999999999999999999874
No 22
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.5e-44 Score=399.74 Aligned_cols=250 Identities=14% Similarity=0.208 Sum_probs=200.3
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||.||+|+++ +|+.||+|++.... ....+.+.+|+++|++++|||||++++++.+.+ ..|||
T Consensus 159 Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~----~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~--~~~iv 232 (573)
T 3uto_A 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH----ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN--EMVMI 232 (573)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSS--EEEEE
T ss_pred cEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc----hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEE
Confidence 344589999999999999986 68899999885433 223467889999999999999999999999887 88999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC--CCceeccccchhhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED--FSPKLVDFDSWKTIL 516 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~--~~~kl~DFGla~~~~ 516 (658)
||||++|+|.+++..... .+++.++..|+.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+.
T Consensus 233 ~E~~~gg~L~~~i~~~~~-~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 233 YEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp EECCCCCBHHHHHTCTTS-CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred EeecCCCcHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 999999999999975432 599999999999999999999999 99999999999999854 789999999998764
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
... ......+++.|||||++.+..|+.++||||+||++|||++|+.||.+... .+............. .+..
T Consensus 309 ~~~---~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~--~~~~~~i~~~~~~~~---~~~~ 380 (573)
T 3uto_A 309 PKQ---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND--DETLRNVKSCDWNMD---DSAF 380 (573)
T ss_dssp TTS---EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHTTCCCCC---SGGG
T ss_pred CCC---ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHhCCCCCC---cccc
Confidence 221 11223456789999999999999999999999999999999999975432 222222221111111 1111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+..+.+|+.+||+.||++|||+.|++++
T Consensus 381 ----~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 381 ----SGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp ----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----cCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1233567899999999999999999999874
No 23
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3.1e-44 Score=378.78 Aligned_cols=255 Identities=22% Similarity=0.257 Sum_probs=205.8
Q ss_pred hcccccCCCCeeEEEEEec--------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCC
Q 006178 362 FSNIIGSSPDSLVYKGTMK--------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSP 432 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~--------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 432 (658)
+.+.||+|+||.||+|++. ++..||+|.+... ......+.+.+|+++++++ +||||+++++++.+.+
T Consensus 85 ~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~- 160 (370)
T 2psq_A 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD---ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG- 160 (370)
T ss_dssp EEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT---CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS-
T ss_pred eeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC---cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC-
Confidence 4589999999999999863 3446888887432 1233456799999999999 8999999999998877
Q ss_pred CceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL 498 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl 498 (658)
..++||||+++|+|.+++.... ...+++.++..++.||++||+|||++ +|+||||||+|||+
T Consensus 161 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 161 -PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp -SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred -CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 6799999999999999997543 13589999999999999999999999 99999999999999
Q ss_pred cCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcH-HH
Q 006178 499 TEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNL-VD 576 (658)
Q Consensus 499 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~-~~ 576 (658)
+.++.+||+|||+++.+...........+.++..|+|||++.+..++.++|||||||++|||+| |+.||....... ..
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~ 316 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 316 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 9999999999999986644333233333445567999999999999999999999999999999 999997544321 11
Q ss_pred HHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 577 WAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
.... ......+...+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 317 ~~~~-------------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 317 LLKE-------------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp HHHT-------------TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhc-------------CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1111 01112233445678899999999999999999999999998865
No 24
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2e-43 Score=363.19 Aligned_cols=259 Identities=21% Similarity=0.299 Sum_probs=198.3
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|+. +++.||+|.+..... .....+++.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 41 i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~ 115 (309)
T 3p86_A 41 IKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDF--HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP--NLSIVTEY 115 (309)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCC--SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT--CCEEEEEC
T ss_pred eeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--ceEEEEec
Confidence 348999999999999987 567899998854432 2334567899999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 442 ASNGTLYEHLHYGER-CQVSWTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
+++|+|.+++..... ..+++..+..++.|++.||+|||++ + |+||||||+||+++.++.+||+|||+++.....
T Consensus 116 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~ 192 (309)
T 3p86_A 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST 192 (309)
T ss_dssp CTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred CCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence 999999999986432 2489999999999999999999998 8 999999999999999999999999998764332
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
... .....++..|+|||.+.+..++.++|||||||++|||+||+.||........ ....... .....
T Consensus 193 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~--~~~~~~~---------~~~~~ 259 (309)
T 3p86_A 193 FLS--SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV--VAAVGFK---------CKRLE 259 (309)
T ss_dssp -----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHH--HHHHHHS---------CCCCC
T ss_pred ccc--cccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhc---------CCCCC
Confidence 211 1223346679999999999999999999999999999999999975432211 1111000 00011
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCch
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 641 (658)
.+...+..+.+++.+||+.||++|||+.|+++.|+.+......
T Consensus 260 ~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p 302 (309)
T 3p86_A 260 IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302 (309)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence 2233446688999999999999999999999999998876443
No 25
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1e-43 Score=368.27 Aligned_cols=262 Identities=19% Similarity=0.298 Sum_probs=205.1
Q ss_pred hhhcccccCCCCeeEEEEEec----CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+.+.+.||+|+||.||+|++. .+..||+|++.... .....+.+.+|++++++++||||+++++++.+.+ ..
T Consensus 51 y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~ 125 (325)
T 3kul_A 51 IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY---TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR--LA 125 (325)
T ss_dssp EEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGG--CC
T ss_pred eEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--cc
Confidence 334589999999999999985 33459999885322 2334567999999999999999999999998877 67
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
++||||+++|+|.++++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTHDG-QFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTTT-CSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EEEeeCCCCCcHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 999999999999999975433 599999999999999999999999 9999999999999999999999999999875
Q ss_pred hhcCCCCC-CcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccC
Q 006178 516 LARSEKNP-GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 516 ~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (658)
........ ...+.++..|+|||.+.+..++.++|||||||++|||++ |+.||...... .........
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~~~--------- 270 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--DVISSVEEG--------- 270 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--HHHHHHHTT---------
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHcC---------
Confidence 43322111 112233456999999999999999999999999999999 99999654322 111111111
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCchh
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISV 642 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 642 (658)
.....+...+..+.+++.+||+.||++|||+.||++.|+.+.....+.
T Consensus 271 -~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~~ 318 (325)
T 3kul_A 271 -YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESL 318 (325)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC--
T ss_pred -CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcccc
Confidence 001122234467889999999999999999999999999998765543
No 26
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2e-43 Score=356.00 Aligned_cols=253 Identities=19% Similarity=0.260 Sum_probs=203.8
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|++.+++.||+|++..... ..+++.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 86 (269)
T 4hcu_A 14 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVFEF 86 (269)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEEEC
T ss_pred eeheecCCCccEEEEEEecCCCeEEEEEeccccc-----CHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--ceEEEEEe
Confidence 4589999999999999998888999998853322 2356899999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++..... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++........
T Consensus 87 ~~~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 162 (269)
T 4hcu_A 87 MEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 162 (269)
T ss_dssp CTTCBHHHHHHTTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred CCCCcHHHHHHhcCc-ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccc
Confidence 999999999975433 589999999999999999999999 9999999999999999999999999999765322111
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
......++..|+|||.+.+..++.++||||||+++|||+| |+.||...... ......... .....+
T Consensus 163 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--~~~~~~~~~----------~~~~~~ 229 (269)
T 4hcu_A 163 -SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTG----------FRLYKP 229 (269)
T ss_dssp -STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTT----------CCCCCC
T ss_pred -cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHhcC----------ccCCCC
Confidence 1111223456999999999999999999999999999999 99999754322 221111111 000112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
...+..+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 230 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 22346688999999999999999999999999988754
No 27
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=5.7e-44 Score=377.99 Aligned_cols=255 Identities=19% Similarity=0.272 Sum_probs=202.6
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.||+|.+.... .....+.|.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 118 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e 192 (377)
T 3cbl_A 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL---PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ--PIYIVME 192 (377)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS---CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS--SCEEEEE
T ss_pred EeeEeccCCCCeEEEEEEecCCeEEEEEEccccC---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC--CcEEEEE
Confidence 4589999999999999987 67889999874321 2233456889999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.++++..+ ..+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++.......
T Consensus 193 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp CCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred cCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 999999999997543 2589999999999999999999999 999999999999999999999999999875432211
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.........+..|+|||.+.+..++.++|||||||++|||+| |+.||........ ........ ....
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~---~~~~~~~~---------~~~~ 336 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT---REFVEKGG---------RLPC 336 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH---HHHHHTTC---------CCCC
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHHHcCC---------CCCC
Confidence 111111122456999999999999999999999999999999 9999975442211 11111111 0112
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
+..++..+.+++.+||+.||++|||+.++++.|+++.+
T Consensus 337 ~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 337 PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 23345678899999999999999999999999998754
No 28
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-43 Score=371.94 Aligned_cols=260 Identities=18% Similarity=0.219 Sum_probs=207.0
Q ss_pred hhcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCc
Q 006178 361 DFSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFT 434 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 434 (658)
.+.+.||+|+||.||+|++. ++..||||++... .......++.+|+.++++++||||+++++++.+.. .
T Consensus 74 ~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~ 148 (367)
T 3l9p_A 74 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV---CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL--P 148 (367)
T ss_dssp EEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS---CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--S
T ss_pred EEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc---cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--C
Confidence 34589999999999999953 3567999987422 12334557899999999999999999999998877 6
Q ss_pred eEEEEEecCCCChhhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC---Ccee
Q 006178 435 RMLVFDYASNGTLYEHLHYGE-----RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF---SPKL 506 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~kl 506 (658)
.++||||+++|+|.+++.... ...+++.+++.++.||++||+|||++ +|+||||||+|||++.++ .+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEE
Confidence 699999999999999997532 23589999999999999999999999 999999999999999554 5999
Q ss_pred ccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCC
Q 006178 507 VDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELP 585 (658)
Q Consensus 507 ~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~ 585 (658)
+|||+++.+.............++..|+|||.+.+..++.++|||||||++|||+| |+.||...... .........
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--~~~~~i~~~- 302 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSG- 302 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHTT-
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC-
Confidence 99999987755444444444445677999999999999999999999999999998 99999754422 111111111
Q ss_pred cccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCc
Q 006178 586 EVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640 (658)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 640 (658)
. ....+...+..+.+++.+||+.||++|||+.||++.|+.+.....
T Consensus 303 ~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 303 G---------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp C---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred C---------CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 0 111122334668899999999999999999999999998876543
No 29
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.1e-43 Score=363.19 Aligned_cols=268 Identities=19% Similarity=0.266 Sum_probs=202.0
Q ss_pred hhhcccccCCCCeeEEEEEe-----cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCc
Q 006178 360 EDFSNIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFT 434 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 434 (658)
+.+.+.||+|+||.||+|++ .+++.||+|++... .....+.+.+|++++++++||||+++++++...+...
T Consensus 12 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (295)
T 3ugc_A 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87 (295)
T ss_dssp EEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred hhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC----CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence 34458999999999999984 25788999987432 2334567899999999999999999999986543225
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 435 RMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
.++||||+++|+|.+++..... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 88 LKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp CEEEEECCTTCBHHHHHHHCGG-GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred eEEEEEeCCCCCHHHHHHhccc-ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 7999999999999999976533 599999999999999999999999 999999999999999999999999999987
Q ss_pred hhhcCCCC-CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCC-------c
Q 006178 515 ILARSEKN-PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELP-------E 586 (658)
Q Consensus 515 ~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~-------~ 586 (658)
........ ......++..|+|||.+.+..++.++||||||+++|||+||..|+.......... ..... .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 240 (295)
T 3ugc_A 164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM---IGNDKQGQMIVFH 240 (295)
T ss_dssp ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHH---HCTTCCTHHHHHH
T ss_pred ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhh---hcCccccchhHHH
Confidence 64332211 1222334456999999999999999999999999999999999985422111110 00000 0
Q ss_pred ccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 587 VMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
.............+...+..+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 241 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 0000111111223344557789999999999999999999999999988754
No 30
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.6e-42 Score=354.54 Aligned_cols=246 Identities=18% Similarity=0.248 Sum_probs=198.4
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.||+|++...... ..+.+.+|+.++++++||||+++++++...+ ..++|||
T Consensus 24 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e 97 (297)
T 3fxz_A 24 RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP----KKELIINEILVMRENKNPNIVNYLDSYLVGD--ELWVVME 97 (297)
T ss_dssp CCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS----CHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred eeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc----HHHHHHHHHHHHhcCCCCCCCeEeEEEEECC--EEEEEEE
Confidence 3478999999999999974 6788999988544322 2456889999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++... .+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 98 ~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 171 (297)
T 3fxz_A 98 YLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (297)
T ss_dssp CCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred CCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc
Confidence 99999999999754 489999999999999999999999 999999999999999999999999999876543222
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
......++..|+|||.+.+..++.++|||||||++|||+||+.||.................+ . ...+
T Consensus 172 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~---------~-~~~~ 239 (297)
T 3fxz_A 172 --KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP---------E-LQNP 239 (297)
T ss_dssp --CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSC---------C-CSCG
T ss_pred --ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC---------C-CCCc
Confidence 122234567799999999999999999999999999999999999754422111111111000 0 0112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+..+.+++.+||+.||++|||+.|+++.
T Consensus 240 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 240 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 2344668899999999999999999999874
No 31
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.5e-43 Score=359.99 Aligned_cols=256 Identities=20% Similarity=0.256 Sum_probs=200.9
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.+|+|++... .....+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 14 ~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e 87 (310)
T 3s95_A 14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF----DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK--RLNFITE 87 (310)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEESCC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred ccceecCCCCEEEEEEEECCCCcEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC--eeEEEEE
Confidence 3489999999999999986 5778888877332 2344568999999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++..... .+++.++..++.|+++||+|||++ +|+||||||+||++++++.+||+|||+++.......
T Consensus 88 ~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 163 (310)
T 3s95_A 88 YIKGGTLRGIIKSMDS-QYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163 (310)
T ss_dssp CCTTCBHHHHHHHCCT-TSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC----
T ss_pred ecCCCcHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccccc
Confidence 9999999999986433 599999999999999999999999 999999999999999999999999999976543222
Q ss_pred CCC------------CcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccc
Q 006178 521 KNP------------GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVM 588 (658)
Q Consensus 521 ~~~------------~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 588 (658)
... .....++..|+|||.+.+..++.++||||||+++|||++|..|+.......... ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~-------~~~~ 236 (310)
T 3s95_A 164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF-------GLNV 236 (310)
T ss_dssp ----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS-------SBCH
T ss_pred cccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH-------hhhh
Confidence 111 012335667999999999999999999999999999999999986432110000 0000
Q ss_pred ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
....+. ..+...+..+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 237 ~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~ 282 (310)
T 3s95_A 237 RGFLDR---YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282 (310)
T ss_dssp HHHHHH---TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hccccc---cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 000000 0112233457899999999999999999999999998764
No 32
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=5.9e-43 Score=362.22 Aligned_cols=261 Identities=21% Similarity=0.291 Sum_probs=201.7
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC--CceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP--FTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~--~~~~lv~ 439 (658)
+.+.||+|+||.||+|++. ++.||||++.... .....+.+|+.++++++||||+++++++.+... ...++||
T Consensus 28 ~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 28 LLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-----KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp EEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhheecccCceEEEEEEEC-CCEEEEEEeecCc-----hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 4489999999999999986 6889999884322 223456679999999999999999999987542 2469999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC-------CCCeeeccCCCcceeecCCCCceeccccch
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-------GPPFTISELNSSAVYLTEDFSPKLVDFDSW 512 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-------~~~ivHrDlkp~NILl~~~~~~kl~DFGla 512 (658)
||+++|+|.++++.. .+++..+..++.|+++||+|||+.+ .++|+||||||+|||++.++.+||+|||++
T Consensus 102 e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a 178 (322)
T 3soc_A 102 AFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178 (322)
T ss_dssp ECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred ecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence 999999999999754 4899999999999999999999852 348999999999999999999999999999
Q ss_pred hhhhhcCCCCCCcccccCccccCCccccc-----CCCCccccchhhHHHHHHHHhCCCCCCCCCC--------------c
Q 006178 513 KTILARSEKNPGTLGSQGAICILPSSLEA-----RHLDVQGNIYAFGVLLLEIISGRPPCCKDKG--------------N 573 (658)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-----~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~--------------~ 573 (658)
+.+.............++..|+|||.+.+ ..++.++|||||||++|||+||+.||..... .
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 258 (322)
T 3soc_A 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS 258 (322)
T ss_dssp EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCC
T ss_pred cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCc
Confidence 87654333322333445778999999886 3566789999999999999999999965322 1
Q ss_pred HHHHHHHhhcCCcccccccCCcCCC--CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 574 LVDWAKDYLELPEVMSYVVDPELKH--FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
...+...... ....+.... .....+..+.+++.+||+.||++|||+.||++.|+++.+
T Consensus 259 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 259 LEDMQEVVVH------KKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp HHHHHHHHTT------SCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhc------ccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1111111110 011111111 123456779999999999999999999999999998764
No 33
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.7e-43 Score=371.74 Aligned_cols=258 Identities=21% Similarity=0.314 Sum_probs=195.1
Q ss_pred hhcccccCCCCeeEEEEEec----CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
.+.+.||+|+||.||+|++. ++..||+|++.... .....++|.+|++++++++||||+++++++.+.+ ..+
T Consensus 48 ~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~ 122 (373)
T 2qol_A 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY---TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PVM 122 (373)
T ss_dssp CCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SCE
T ss_pred eeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC--ceE
Confidence 34589999999999999975 46779999874322 2334567999999999999999999999998877 679
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++|+|.++++... ..+++.++..++.||++||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 123 lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 198 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLE 198 (373)
T ss_dssp EEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence 9999999999999998543 3599999999999999999999999 99999999999999999999999999998765
Q ss_pred hcCCCCCC-cccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 517 ARSEKNPG-TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 517 ~~~~~~~~-~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
........ ..+..+..|+|||.+.+..++.++|||||||++|||++ |+.||...... ......... .
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--~~~~~i~~~-~-------- 267 (373)
T 2qol_A 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIKAVDEG-Y-------- 267 (373)
T ss_dssp ---------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--HHHHHHHTT-E--------
T ss_pred cCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC-C--------
Confidence 33221111 12223456999999999999999999999999999998 99999654322 111111110 0
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
....+...+..+.+++.+||+.||++||++.||++.|+++....
T Consensus 268 -~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 268 -RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp -ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred -CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 00112234467889999999999999999999999999987543
No 34
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.8e-42 Score=355.97 Aligned_cols=262 Identities=23% Similarity=0.327 Sum_probs=200.3
Q ss_pred hhhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.+.||+|+||.||+|++.+ .+|+|.+..... .....+.+.+|++++++++||||+++++++... ..++||
T Consensus 38 ~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~lv~ 110 (307)
T 3lb7_A 38 VMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDP--TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD---NLAIVT 110 (307)
T ss_dssp CCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEE
T ss_pred eEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCC--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC---cEEEEE
Confidence 3455899999999999998754 578887644322 233456799999999999999999999987654 468999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++.... ..+++.++..|+.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++......
T Consensus 111 e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~ 186 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp ECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC-----
T ss_pred ecCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceeccccc
Confidence 9999999999997443 3699999999999999999999999 99999999999999999999999999987654322
Q ss_pred CCCCCcccccCccccCCcccc---cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 520 EKNPGTLGSQGAICILPSSLE---ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~---~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
.........++..|+|||.+. +..++.++|||||||++|||+||+.||.......... ..... ....+..
T Consensus 187 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~-~~~~~------~~~~~~~ 259 (307)
T 3lb7_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQII-FMVGR------GYASPDL 259 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH-HHHHH------TCCCCCS
T ss_pred ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHH-HHHhc------CCCCcch
Confidence 222222334567799999986 5678999999999999999999999997544321111 11100 0111222
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
......++..+.+++.+||+.||++||++.||++.|+.+....
T Consensus 260 ~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 260 SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 2222334567889999999999999999999999999887654
No 35
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-43 Score=366.31 Aligned_cols=258 Identities=22% Similarity=0.303 Sum_probs=205.2
Q ss_pred hcccccCCCCeeEEEEEecC------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 362 FSNIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+.+.||+|+||.||+|++.+ ++.||+|.+.... .....+.+.+|+.++++++||||+++++++.+.+ ..
T Consensus 51 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~ 125 (343)
T 1luf_A 51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA---SADMQADFQREAALMAEFDNPNIVKLLGVCAVGK--PM 125 (343)
T ss_dssp EEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SC
T ss_pred eeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC--ce
Confidence 34899999999999999853 3678888874322 2334567999999999999999999999998877 67
Q ss_pred EEEEEecCCCChhhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCC
Q 006178 436 MLVFDYASNGTLYEHLHYGE----------------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp 493 (658)
++||||+++|+|.+++.... ...+++.+++.++.||++||+|||++ +|+||||||
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp 202 (343)
T 1luf_A 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLAT 202 (343)
T ss_dssp EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCc
Confidence 99999999999999997532 14699999999999999999999999 999999999
Q ss_pred cceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCC
Q 006178 494 SAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKG 572 (658)
Q Consensus 494 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~ 572 (658)
+||++++++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||+| |+.||.....
T Consensus 203 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 282 (343)
T 1luf_A 203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 282 (343)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred ceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh
Confidence 999999999999999999987654332222223334567999999999999999999999999999999 9999975432
Q ss_pred cHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 573 NLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
. +....... ......+...+..+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 283 ~--~~~~~~~~----------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 283 E--EVIYYVRD----------GNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp H--HHHHHHHT----------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred H--HHHHHHhC----------CCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 2 11111111 1111223334567889999999999999999999999999987654
No 36
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.2e-43 Score=355.55 Aligned_cols=254 Identities=19% Similarity=0.257 Sum_probs=203.0
Q ss_pred hhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.+.+.||+|+||.||+|+..++..||+|.+..... ..+++.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 83 (268)
T 3sxs_A 11 TLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-----SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY--PIYIVTE 83 (268)
T ss_dssp EEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SEEEEEE
T ss_pred eeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-----cHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--ceEEEEE
Confidence 34589999999999999999888999998854332 2356899999999999999999999998877 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++..... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 84 ~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 84 YISNGCLLNYLRSHGK-GLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp CCTTCBHHHHHHHHGG-GCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred ccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 9999999999975432 599999999999999999999999 999999999999999999999999999876532211
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
. ......++..|+|||.+.+..++.++||||||+++|||+| |+.||....... ......... ....
T Consensus 160 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~~~~----------~~~~ 226 (268)
T 3sxs_A 160 V-SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE--VVLKVSQGH----------RLYR 226 (268)
T ss_dssp E-ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHHHHHTTC----------CCCC
T ss_pred h-cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH--HHHHHHcCC----------CCCC
Confidence 1 1111122346999999999899999999999999999999 999996543221 111111110 0011
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
+...+..+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 227 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 227 PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 122235688999999999999999999999999998764
No 37
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4.3e-42 Score=355.41 Aligned_cols=260 Identities=19% Similarity=0.258 Sum_probs=207.5
Q ss_pred ccccHHHHHHHHhh----------h--cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHh
Q 006178 348 VRFSRQELEVACED----------F--SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLAR 414 (658)
Q Consensus 348 ~~~~~~~l~~~~~~----------f--~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~ 414 (658)
..|++++++.++.. | .+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+.++++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~----~~~~~~~~E~~~l~~ 98 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ----QRRELLFNEVVIMRD 98 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CSHHHHHHHHHHHTT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch----hHHHHHHHHHHHHHh
Confidence 46888888888864 2 268999999999999987 688999998854332 234568899999999
Q ss_pred ccCCCccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCc
Q 006178 415 INHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSS 494 (658)
Q Consensus 415 l~H~nIv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~ 494 (658)
++||||+++++++...+ ..++||||+++|+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+
T Consensus 99 l~h~niv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~ 170 (321)
T 2c30_A 99 YQHFNVVEMYKSYLVGE--ELWVLMEFLQGGALTDIVSQV---RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSD 170 (321)
T ss_dssp CCCTTBCCEEEEEEETT--EEEEEECCCCSCBHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGG
T ss_pred CCCCCcceEEEEEEECC--EEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHH
Confidence 99999999999999877 789999999999999998743 489999999999999999999999 9999999999
Q ss_pred ceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcH
Q 006178 495 AVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL 574 (658)
Q Consensus 495 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~ 574 (658)
||+++.++.+||+|||+++........ .....++..|+|||.+.+..++.++|||||||++|||+||+.||.....
T Consensus 171 NIll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~-- 246 (321)
T 2c30_A 171 SILLTLDGRVKLSDFGFCAQISKDVPK--RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP-- 246 (321)
T ss_dssp GEEECTTCCEEECCCTTCEECCSSSCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--
T ss_pred HEEECCCCcEEEeeeeeeeecccCccc--cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--
Confidence 999999999999999998765432211 1223456779999999999999999999999999999999999965432
Q ss_pred HHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 575 VDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
........... .+... .....+..+.+++.+||+.||++|||+.|+++.
T Consensus 247 ~~~~~~~~~~~-------~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 247 VQAMKRLRDSP-------PPKLK-NSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHHHHHHSS-------CCCCT-TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHhcCC-------CCCcC-ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11111111110 01110 112234568899999999999999999999875
No 38
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.9e-42 Score=358.52 Aligned_cols=245 Identities=17% Similarity=0.193 Sum_probs=199.0
Q ss_pred hcccccCCCCeeEEEEEe-cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++ .+|+.||+|++..... .....+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 19 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~lv~e 94 (328)
T 3fe3_A 19 LLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL--NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK--TLYLIME 94 (328)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--EEEEEEE
Confidence 348999999999999998 4788999998854332 2334567889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++...+ .+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 95 ~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 168 (328)
T 3fe3_A 95 YASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG- 168 (328)
T ss_dssp CCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC-
T ss_pred CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC-
Confidence 999999999997654 499999999999999999999999 99999999999999999999999999997653221
Q ss_pred CCCCcccccCccccCCcccccCCCC-ccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLD-VQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~-~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
......++..|+|||.+.+..++ .++||||+||++|||+||+.||..... ............ ..
T Consensus 169 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~-----------~~ 233 (328)
T 3fe3_A 169 --KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL--KELRERVLRGKY-----------RI 233 (328)
T ss_dssp --GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCC-----------CC
T ss_pred --ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCCC-----------CC
Confidence 11223456779999999988775 899999999999999999999975432 222222221111 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+++.+||+.||.+|||++|+++.
T Consensus 234 p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 234 PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 22234567899999999999999999999875
No 39
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.5e-43 Score=370.17 Aligned_cols=261 Identities=23% Similarity=0.246 Sum_probs=207.6
Q ss_pred hhcccccCCCCeeEEEEEec--------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCC
Q 006178 361 DFSNIIGSSPDSLVYKGTMK--------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESS 431 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~--------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~ 431 (658)
.+.+.||+|+||.||+|++. .+..||+|++.... .....+++.+|+++++++ +||||+++++++.+.+
T Consensus 72 ~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 72 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA---TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp EEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred EeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc---CHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 34589999999999999963 23468888874322 233456789999999999 9999999999998877
Q ss_pred CCceEEEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCccee
Q 006178 432 PFTRMLVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVY 497 (658)
Q Consensus 432 ~~~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NIL 497 (658)
..++||||+++|+|.+++.... ...+++.+++.|+.||+.||+|||++ +|+||||||+|||
T Consensus 149 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 149 --PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 223 (382)
T ss_dssp --SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred --ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEE
Confidence 6799999999999999997543 23599999999999999999999999 9999999999999
Q ss_pred ecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHH
Q 006178 498 LTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVD 576 (658)
Q Consensus 498 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~ 576 (658)
+++++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||+| |+.||..... .+
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~--~~ 301 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--EE 301 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HH
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HH
Confidence 99999999999999986643332233333444567999999999999999999999999999999 9999975432 22
Q ss_pred HHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCch
Q 006178 577 WAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 641 (658)
........ . ....+...+..+.+++.+||+.||++|||+.||++.|+++......
T Consensus 302 ~~~~~~~~-~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 356 (382)
T 3tt0_A 302 LFKLLKEG-H---------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 356 (382)
T ss_dssp HHHHHHTT-C---------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHcC-C---------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 22211111 0 0111223346688999999999999999999999999998765443
No 40
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.7e-43 Score=381.99 Aligned_cols=254 Identities=14% Similarity=0.247 Sum_probs=204.5
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|.+.++..||||++.... ...+.|.+|++++++++||||+++++++.. + ..++||||
T Consensus 192 ~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~-~--~~~lv~e~ 263 (454)
T 1qcf_A 192 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-E--PIYIITEF 263 (454)
T ss_dssp EEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-----BCHHHHHHHHHHHTTCCCTTBCCEEEEECS-S--SCEEEECC
T ss_pred EEEEcccCCceEEEEEEECCccEEEEEEecCCC-----ccHHHHHHHHHHHhhCCCCCEeeEEEEEeC-C--ccEEEEee
Confidence 458999999999999999888899999985432 125679999999999999999999999863 3 46999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.++++......+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 264 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 340 (454)
T 1qcf_A 264 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 340 (454)
T ss_dssp CTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH
T ss_pred cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee
Confidence 9999999999865444589999999999999999999999 9999999999999999999999999999875322111
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
.......+..|+|||.+....++.++|||||||++|||+| |+.||...... +........ . ....+
T Consensus 341 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~-~---------~~~~~ 407 (454)
T 1qcf_A 341 -AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERG-Y---------RMPRP 407 (454)
T ss_dssp -TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHHT-C---------CCCCC
T ss_pred -ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC-C---------CCCCC
Confidence 1111223456999999999999999999999999999999 99999754321 111111111 0 01122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
..++..+.+++.+||+.||++|||+.+|++.|+++....
T Consensus 408 ~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 408 ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 334567889999999999999999999999999987654
No 41
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.2e-42 Score=360.82 Aligned_cols=254 Identities=18% Similarity=0.217 Sum_probs=196.9
Q ss_pred hcccccCCCCeeEEEEEec-CCCe----EEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPE----IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~----vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.||+|+||.||+|++. +++. ||+|.+.... .....+.+.+|+.++++++||||+++++++.+.. .+
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~ 92 (327)
T 3poz_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTST---VQ 92 (327)
T ss_dssp EEEEEEEETTEEEEEEEECC----CCEEEEEEEC----------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS---EE
T ss_pred cceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC---eE
Confidence 3489999999999999975 3443 4666553221 2234567999999999999999999999998754 68
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+|+||+++|+|.+++..... .+++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 168 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTT-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred EEEEecCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence 99999999999999986443 599999999999999999999999 99999999999999999999999999998875
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHH-HHHHHhhcCCcccccccCC
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLV-DWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 594 (658)
............++..|+|||.+.+..++.++|||||||++|||+| |+.||........ .......
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~------------ 236 (327)
T 3poz_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE------------ 236 (327)
T ss_dssp TTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC------------
T ss_pred CCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCC------------
Confidence 4433333333444567999999999999999999999999999999 9999976543222 1111110
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
....+...+..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 237 -~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 237 -RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred -CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 0112223446688999999999999999999999999987653
No 42
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=6.5e-43 Score=362.16 Aligned_cols=267 Identities=19% Similarity=0.278 Sum_probs=193.3
Q ss_pred hhcccccCCCCeeEEEEEecCCC----eEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCC---
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGGP----EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF--- 433 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~~----~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~--- 433 (658)
.+.+.||+|+||.||+|++..+. .||+|.+..... .....+.+.+|++++++++||||+++++++......
T Consensus 26 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 103 (323)
T 3qup_A 26 TLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII--ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRL 103 (323)
T ss_dssp EEEEEEEEETTEEEEEEEC-------CEEEEEEC--------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC------
T ss_pred EEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc--CHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCC
Confidence 34589999999999999976543 789988754322 223356799999999999999999999999876521
Q ss_pred -ceEEEEEecCCCChhhhhccCC----CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceecc
Q 006178 434 -TRMLVFDYASNGTLYEHLHYGE----RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVD 508 (658)
Q Consensus 434 -~~~lv~E~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~D 508 (658)
..++||||+++|+|.+++.... ...+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|
T Consensus 104 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl~D 180 (323)
T 3qup_A 104 PIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVAD 180 (323)
T ss_dssp -CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECC
T ss_pred CccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEEee
Confidence 2389999999999999986322 22589999999999999999999999 999999999999999999999999
Q ss_pred ccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcc
Q 006178 509 FDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEV 587 (658)
Q Consensus 509 FGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 587 (658)
||+++...............++..|+|||.+.+..++.++|||||||++|||+| |+.||......... .....
T Consensus 181 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~--~~~~~---- 254 (323)
T 3qup_A 181 FGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIY--NYLIG---- 254 (323)
T ss_dssp CCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH--HHHHT----
T ss_pred ccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHH--HHHhc----
Confidence 999987644332222233334567999999999999999999999999999999 99999754432111 11111
Q ss_pred cccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCchhhh
Q 006178 588 MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVEL 644 (658)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~ 644 (658)
......+...+..+.+++.+||+.||++|||+.|+++.|+++.........
T Consensus 255 ------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~ 305 (323)
T 3qup_A 255 ------GNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLST 305 (323)
T ss_dssp ------TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC------
T ss_pred ------CCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCC
Confidence 111112233446788999999999999999999999999999876544333
No 43
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=4.1e-43 Score=384.21 Aligned_cols=255 Identities=21% Similarity=0.289 Sum_probs=207.0
Q ss_pred hhcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|++.. +..||||.+..... ..++|.+|++++++++||||+++++++.+.+ ..++||
T Consensus 223 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~lv~ 295 (495)
T 1opk_A 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYIIT 295 (495)
T ss_dssp EEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEEEE
T ss_pred eeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-----chHHHHHHHHHHHhcCCCCEeeEEEEEecCC--cEEEEE
Confidence 345899999999999999875 77899998753321 2467999999999999999999999998877 679999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++......
T Consensus 296 E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 372 (495)
T 1opk_A 296 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372 (495)
T ss_dssp ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred EccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence 999999999999876555799999999999999999999999 99999999999999999999999999998653221
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc-HHHHHHHhhcCCcccccccCCcCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN-LVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
. ........+..|+|||.+....++.++|||||||++|||+| |+.||...... ....+.... ..
T Consensus 373 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-------------~~ 438 (495)
T 1opk_A 373 Y-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY-------------RM 438 (495)
T ss_dssp E-ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC-------------CC
T ss_pred e-eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-------------CC
Confidence 1 11111223456999999999999999999999999999999 99999764432 222111100 01
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
..+..++..+.+|+.+||+.||++|||+.||++.|+.+....
T Consensus 439 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~ 480 (495)
T 1opk_A 439 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 480 (495)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSS
T ss_pred CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhcc
Confidence 123344567889999999999999999999999999987644
No 44
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=7.4e-43 Score=367.30 Aligned_cols=267 Identities=19% Similarity=0.220 Sum_probs=205.5
Q ss_pred HHHHHHHhhh--cccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccce
Q 006178 353 QELEVACEDF--SNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKL 423 (658)
Q Consensus 353 ~~l~~~~~~f--~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l 423 (658)
.+++...++| .+.||+|+||.||+|++. +++.||||++.... .....+.+.+|++++.++ +||||+++
T Consensus 15 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 15 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC---CHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 3333334444 489999999999999842 45689999884322 223356799999999999 89999999
Q ss_pred eeEEecCCCCceEEEEEecCCCChhhhhccCCC-----------------------------------------------
Q 006178 424 LGYCRESSPFTRMLVFDYASNGTLYEHLHYGER----------------------------------------------- 456 (658)
Q Consensus 424 ~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~----------------------------------------------- 456 (658)
++++.+.+. ..++||||+++|+|.+++.....
T Consensus 92 ~~~~~~~~~-~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 92 LGACTKPGG-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEECSTTS-CCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeecCCC-ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 999987653 47999999999999999975432
Q ss_pred -----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 457 -----------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 457 -----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.+....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 1289999999999999999999999 99999999999999999999999999998654332
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
.........++..|+|||.+.+..++.++|||||||++|||+| |+.||............. ... . ...
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~~~-~---------~~~ 316 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEG-T---------RMR 316 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHH-HHT-C---------CCC
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHH-HcC-C---------CCC
Confidence 2222222234566999999999999999999999999999999 999997654322111111 110 0 001
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
.+...+..+.+++.+||+.||++|||+.|++++|++++.
T Consensus 317 ~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 317 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 122234568899999999999999999999999998764
No 45
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=8.8e-43 Score=359.55 Aligned_cols=255 Identities=20% Similarity=0.266 Sum_probs=204.5
Q ss_pred hcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 362 FSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+.+.||+|+||.||+|++. ++..||+|.+.... .....+.+.+|++++++++||||+++++++.+.+ ..
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~ 101 (314)
T 2ivs_A 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA---SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG--PL 101 (314)
T ss_dssp EEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SC
T ss_pred eeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC---CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC--ce
Confidence 3488999999999999862 34678888874322 2334567899999999999999999999998877 67
Q ss_pred EEEEEecCCCChhhhhccCCC----------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCC
Q 006178 436 MLVFDYASNGTLYEHLHYGER----------------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNS 493 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp 493 (658)
++||||+++|+|.+++..... ..+++.++..++.||++||+|||++ +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 999999999999999975432 2489999999999999999999999 999999999
Q ss_pred cceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCC
Q 006178 494 SAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKG 572 (658)
Q Consensus 494 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~ 572 (658)
+||++++++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||+| |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999876543322222233344567999999999999999999999999999999 9999975443
Q ss_pred c-HHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 573 N-LVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 573 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
. ........ .....+...+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 259 ~~~~~~~~~~-------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 259 ERLFNLLKTG-------------HRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp GGHHHHHHTT-------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhhcC-------------CcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 2 22111110 0111222344678899999999999999999999999998765
No 46
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1e-41 Score=348.17 Aligned_cols=263 Identities=18% Similarity=0.235 Sum_probs=205.3
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. ++..||+|.+...... .....+.+.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus 15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e 91 (294)
T 4eqm_A 15 IVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPRE-KEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD--CYYLVME 91 (294)
T ss_dssp EEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSC-CHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccc-cHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC--eEEEEEe
Confidence 4589999999999999976 5788999988554322 3344567999999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++...+ .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 92 ~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 166 (294)
T 4eqm_A 92 YIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166 (294)
T ss_dssp CCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred CCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence 999999999997654 499999999999999999999999 999999999999999999999999999986543221
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
. ......++..|+|||.+.+..++.++||||||+++|||+||+.||....... ......... ..... ....
T Consensus 167 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~--~~~~~~~~~--~~~~~----~~~~ 237 (294)
T 4eqm_A 167 T-QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS--IAIKHIQDS--VPNVT----TDVR 237 (294)
T ss_dssp ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH--HHHHHHSSC--CCCHH----HHSC
T ss_pred c-ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHhhcc--CCCcc----hhcc
Confidence 1 1122235677999999999999999999999999999999999997543221 111111110 00000 0111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhhccCCCch
Q 006178 601 YDDLKVICEVVNLCVNPDITKRP-SMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~~~~ 641 (658)
...+..+.+++.+||+.||++|| +++++.+.|+.+......
T Consensus 238 ~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~ 279 (294)
T 4eqm_A 238 KDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRA 279 (294)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSST
T ss_pred cCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccC
Confidence 22346688999999999999998 899999999998765543
No 47
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.1e-42 Score=374.39 Aligned_cols=248 Identities=22% Similarity=0.309 Sum_probs=202.0
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|.+. ++.||||.+.... ..+.|.+|++++++++||||+++++++.+.+. ..++||||
T Consensus 197 ~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~iv~e~ 268 (450)
T 1k9a_A 197 LLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEY 268 (450)
T ss_dssp EEEEEEECSSEEEEEEEET-TEEEEEEEESSCT------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTS-CEEEEEEC
T ss_pred EEeeecCcCCeeEEEEEec-CCeEEEEEeCCch------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCC-ceEEEEEe
Confidence 3489999999999999986 6789999885322 24579999999999999999999999876542 57999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++...+...+++..+..++.||++||+|||++ +|+||||||+|||+++++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 342 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc---
Confidence 9999999999876555689999999999999999999999 9999999999999999999999999998753221
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc-HHHHHHHhhcCCcccccccCCcCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN-LVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
...+..+..|+|||.+.+..++.++|||||||++|||+| |+.||...... ....+... .....
T Consensus 343 --~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-------------~~~~~ 407 (450)
T 1k9a_A 343 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-------------YKMDA 407 (450)
T ss_dssp ------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTT-------------CCCCC
T ss_pred --ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-------------CCCCC
Confidence 112234567999999999999999999999999999999 99999754322 22211110 01122
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
+..++..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 408 p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 408 PDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 334457788999999999999999999999999987653
No 48
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.3e-42 Score=352.74 Aligned_cols=252 Identities=18% Similarity=0.263 Sum_probs=199.7
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|.+.++..||+|++..... ..+++.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 100 (283)
T 3gen_A 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-----SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR--PIFIITEY 100 (283)
T ss_dssp EEEECC---CEEEEEEEETTTEEEEEEEECTTSB-----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEECC
T ss_pred hHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-----CHHHHHHHHHHHhcCCCCCEeeEEEEEecCC--CeEEEEec
Confidence 4489999999999999999888999998853322 2356899999999999999999999998877 77999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++........
T Consensus 101 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 176 (283)
T 3gen_A 101 MANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 176 (283)
T ss_dssp CTTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH
T ss_pred cCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccccccc
Confidence 99999999997533 2599999999999999999999999 9999999999999999999999999999765322111
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
......++..|+|||.+.+..++.++||||||+++|||+| |+.||...... .......... ....+
T Consensus 177 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~----------~~~~~ 243 (283)
T 3gen_A 177 -SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHIAQGL----------RLYRP 243 (283)
T ss_dssp -STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHTTC----------CCCCC
T ss_pred -cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--HHHHHHhccc----------CCCCC
Confidence 1111223456999999999999999999999999999999 99999754322 1111111110 00111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
...++.+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 244 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 244 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 2223568899999999999999999999999998764
No 49
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-42 Score=359.80 Aligned_cols=246 Identities=15% Similarity=0.202 Sum_probs=191.6
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.||+|++...... ...+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 14 i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~---~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~--~~~lv~E 88 (347)
T 3zgw_A 14 LHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG---SDLPRIKTEIEALKNLRHQHICQLYHVLETAN--KIFMVLE 88 (347)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC------CCHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc---hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC--EEEEEEe
Confidence 3489999999999999975 6788999988544322 12346889999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||++........
T Consensus 89 ~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 163 (347)
T 3zgw_A 89 YCPGGELFDYIISQD--RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD 163 (347)
T ss_dssp CCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC
Confidence 999999999997554 499999999999999999999999 999999999999999999999999999876432221
Q ss_pred CCCCcccccCccccCCcccccCCC-CccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHL-DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
. ......++..|+|||.+.+..+ +.++||||+||++|||++|+.||.... ............. ..
T Consensus 164 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~--~~~~~~~i~~~~~-----------~~ 229 (347)
T 3zgw_A 164 Y-HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN--VMALYKKIMRGKY-----------DV 229 (347)
T ss_dssp ---------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHTCC-----------CC
T ss_pred c-cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHHcCCC-----------CC
Confidence 1 1122335677999999988775 899999999999999999999997543 2222222221111 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 230 p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 230 PKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 22233567899999999999999999999975
No 50
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2e-41 Score=355.13 Aligned_cols=252 Identities=20% Similarity=0.239 Sum_probs=199.3
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeecccc--chhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW--TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
.+.+.||+|+||.||+|+.. +|+.+|+|.+....... .....+.+.+|+.++++++||||+++++++.+.+ ..++
T Consensus 15 ~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~l 92 (361)
T 2yab_A 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT--DVVL 92 (361)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred EEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC--EEEE
Confidence 34589999999999999986 57889999886544221 1223467899999999999999999999998877 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC----Cceeccccchh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF----SPKLVDFDSWK 513 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGla~ 513 (658)
||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||+++++ .+||+|||+++
T Consensus 93 v~e~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~ 167 (361)
T 2yab_A 93 ILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (361)
T ss_dssp EEECCCSCBHHHHHTTCS--CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred EEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence 999999999999997543 599999999999999999999999 999999999999998876 79999999998
Q ss_pred hhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccC
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (658)
.+.... ......+++.|+|||.+.+..++.++|||||||++|||++|..||..... .................
T Consensus 168 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~--~~~~~~i~~~~~~~~~~-- 240 (361)
T 2yab_A 168 EIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLANITAVSYDFDEE-- 240 (361)
T ss_dssp ECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHTTCCCCCHH--
T ss_pred EcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhcCCCCCch--
Confidence 654321 11223356779999999999999999999999999999999999975432 12222211111000000
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.....+..+.+++.+||+.||++|||+.|+++.
T Consensus 241 -----~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 241 -----FFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp -----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -----hccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 001123568899999999999999999999863
No 51
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=3.6e-42 Score=356.17 Aligned_cols=250 Identities=15% Similarity=0.182 Sum_probs=196.4
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.||+|.+..+... ...+.+.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus 11 i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~e 85 (323)
T 3tki_A 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLFLE 85 (323)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----------CHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred eeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc---chHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--eEEEEEE
Confidence 3489999999999999987 6788999988544321 22356889999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+.....
T Consensus 86 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 160 (323)
T 3tki_A 86 YCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (323)
T ss_dssp CCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred cCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCc
Confidence 999999999997554 499999999999999999999999 999999999999999999999999999976543222
Q ss_pred CCCCcccccCccccCCcccccCCC-CccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHL-DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
........++..|+|||.+.+..+ +.++|||||||++|||+||+.||.........+....... ... ..
T Consensus 161 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~-~~~---------~~ 230 (323)
T 3tki_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK-TYL---------NP 230 (323)
T ss_dssp ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTC-TTS---------TT
T ss_pred ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccc-ccC---------Cc
Confidence 222223345677999999988775 7899999999999999999999976543322221111110 000 00
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
....+..+.+|+.+||+.||++|||+.|+++.
T Consensus 231 ~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 231 WKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 11234567899999999999999999999875
No 52
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.5e-41 Score=345.74 Aligned_cols=253 Identities=21% Similarity=0.335 Sum_probs=199.1
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhh---HHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYL---ELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
.+.+.||+|+||.||+|++. +++.||+|++........... .+.+.+|++++++++||||+++++++.+.. +
T Consensus 22 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~ 97 (287)
T 4f0f_A 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP----R 97 (287)
T ss_dssp EEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT----E
T ss_pred eehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC----e
Confidence 34588999999999999985 678899998865443222211 167899999999999999999999987644 7
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeeccCCCcceeecCCCC-----ceeccc
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLTEDFS-----PKLVDF 509 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDlkp~NILl~~~~~-----~kl~DF 509 (658)
+||||+++|+|.+++..... .+++..+..++.|++.||+|||++ + |+||||||+||+++.++. +||+||
T Consensus 98 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 98 MVMEFVPCGDLYHRLLDKAH-PIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp EEEECCTTCBHHHHHHCTTS-CCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred EEEEecCCCCHHHHHhcccC-CccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 99999999999998875443 699999999999999999999998 8 999999999999988776 999999
Q ss_pred cchhhhhhcCCCCCCcccccCccccCCcccc--cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcc
Q 006178 510 DSWKTILARSEKNPGTLGSQGAICILPSSLE--ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEV 587 (658)
Q Consensus 510 Gla~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 587 (658)
|+++..... .....++..|+|||.+. ...++.++|||||||++|||++|+.||...................
T Consensus 174 g~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~- 247 (287)
T 4f0f_A 174 GLSQQSVHS-----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL- 247 (287)
T ss_dssp TTCBCCSSC-----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCC-
T ss_pred Ccccccccc-----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCC-
Confidence 998743221 12233456799999984 4567899999999999999999999997655443333222221110
Q ss_pred cccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 588 MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
. ...+...+..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 248 -----~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 248 -----R---PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp -----C---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred -----C---CCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 0 112233446788999999999999999999999999864
No 53
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3.9e-42 Score=346.90 Aligned_cols=253 Identities=22% Similarity=0.300 Sum_probs=190.3
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|++. ++.+|+|.+............+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 11 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 87 (271)
T 3dtc_A 11 LEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP--NLCLVMEF 87 (271)
T ss_dssp EEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC----CEEEEEC
T ss_pred eeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC--ceEEEEEc
Confidence 4589999999999999985 78899998765443322334567899999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC--------CCCceeccccchh
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE--------DFSPKLVDFDSWK 513 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~--------~~~~kl~DFGla~ 513 (658)
+++++|.+++... .+++..+..++.|+++||+|||++...+|+||||||+||+++. ++.+||+|||+++
T Consensus 88 ~~~~~L~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~ 164 (271)
T 3dtc_A 88 ARGGPLNRVLSGK---RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164 (271)
T ss_dssp CTTEEHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred CCCCCHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence 9999999998643 5899999999999999999999992122999999999999986 6789999999997
Q ss_pred hhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccC
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (658)
....... ....++..|+|||.+.+..++.++||||||+++|||+||+.||.........+.... . .
T Consensus 165 ~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~--~-~------- 230 (271)
T 3dtc_A 165 EWHRTTK----MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM--N-K------- 230 (271)
T ss_dssp ---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHT--S-C-------
T ss_pred ccccccc----cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhc--C-C-------
Confidence 6543221 122346679999999999999999999999999999999999975443222211111 1 0
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
.....+...+..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 231 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 231 -LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 00112233446788999999999999999999999999864
No 54
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.1e-42 Score=376.69 Aligned_cols=254 Identities=17% Similarity=0.250 Sum_probs=200.8
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|++.++..||||++..... ..+.|.+|++++++++||||+++++++.+ + ..++||||
T Consensus 188 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~--~~~iv~e~ 259 (452)
T 1fmk_A 188 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIYIVTEY 259 (452)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCEEEECC
T ss_pred eeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-----CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-C--ceEEEehh
Confidence 4588999999999999999888899998753321 24579999999999999999999999876 4 46999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.......+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++.......
T Consensus 260 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~- 335 (452)
T 1fmk_A 260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY- 335 (452)
T ss_dssp CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred hcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCce-
Confidence 9999999999754434589999999999999999999999 999999999999999999999999999987543211
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
........+..|+|||.+.+..++.++|||||||++|||+| |+.||...... +........ .....+
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~----------~~~~~~ 403 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVLDQVERG----------YRMPCP 403 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTT----------CCCCCC
T ss_pred ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC----------CCCCCC
Confidence 11111223456999999999999999999999999999999 99999754321 111111111 011123
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
..++..+.+++.+||+.||++|||++++++.|+.+....
T Consensus 404 ~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 344567889999999999999999999999999987644
No 55
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.1e-42 Score=366.71 Aligned_cols=268 Identities=13% Similarity=0.107 Sum_probs=198.9
Q ss_pred hcccccCCCCeeEEEEEecC------CCeEEEEEEeeeccccc-------hhhHHHHHHHHHHHHhccCCCccceeeEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKG------GPEIAVISLCIKEEHWT-------GYLELYFQREVADLARINHENTGKLLGYCR 428 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~------~~~vavk~~~~~~~~~~-------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 428 (658)
+.+.||+|+||.||+|.+.. ++.||+|.+........ ......+..|+..++.++||||+++++++.
T Consensus 39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~ 118 (364)
T 3op5_A 39 VGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGL 118 (364)
T ss_dssp EEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEE
T ss_pred EEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeee
Confidence 45899999999999999865 36889998754321100 011123445666777888999999999987
Q ss_pred cCCC--CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec--CCCCc
Q 006178 429 ESSP--FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT--EDFSP 504 (658)
Q Consensus 429 ~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~--~~~~~ 504 (658)
.... ...++||||+ +++|.+++.... ..+++.+++.|+.||+.||+|||++ +|+||||||+|||++ .++.+
T Consensus 119 ~~~~~~~~~~lv~e~~-g~~L~~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~~~~~ 193 (364)
T 3op5_A 119 HDKNGKSYRFMIMDRF-GSDLQKIYEANA-KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQV 193 (364)
T ss_dssp EEETTEEEEEEEEECE-EEEHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSCTTCE
T ss_pred eccCCcceEEEEEeCC-CCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCCCCeE
Confidence 6421 2579999999 999999997643 3599999999999999999999999 999999999999999 88999
Q ss_pred eeccccchhhhhhcCCCCC-----CcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc--HHHH
Q 006178 505 KLVDFDSWKTILARSEKNP-----GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN--LVDW 577 (658)
Q Consensus 505 kl~DFGla~~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~--~~~~ 577 (658)
||+|||+++.+........ .....++..|+|||.+.+..++.++|||||||++|||+||+.||...... ....
T Consensus 194 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~ 273 (364)
T 3op5_A 194 YLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRD 273 (364)
T ss_dssp EECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHH
T ss_pred EEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHH
Confidence 9999999987653322111 12223567899999999999999999999999999999999999743222 2211
Q ss_pred HHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 578 AKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
...... .......++.+. ....+.++.+++..||+.||++||++.+|++.|+++...
T Consensus 274 ~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 274 SKIRYR--ENIASLMDKCFP--AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp HHHHHH--HCHHHHHHHHSC--TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHhh--hhHHHHHHHhcc--cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 111111 111222222111 012245688999999999999999999999999987753
No 56
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-42 Score=364.68 Aligned_cols=259 Identities=23% Similarity=0.328 Sum_probs=193.4
Q ss_pred hcccccCCCCeeEEEEEecC--C--CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG--G--PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~--~--~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
+.+.||+|+||.||+|++.+ + ..+|+|.+... ......++|.+|+.++++++||||+++++++.+.+. ..++
T Consensus 93 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~-~~~l 168 (373)
T 3c1x_A 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLV 168 (373)
T ss_dssp EEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC---SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSS-CCEE
T ss_pred cCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC---CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCC-CeEE
Confidence 45789999999999999742 2 25677766422 223345679999999999999999999999765432 5689
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+++|+|.+++..... .+++.++..++.||++||+|||++ +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 169 v~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 244 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 244 (373)
T ss_dssp EEECCTTCBHHHHHHCTTC-CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEECCCCCCHHHHHhhccc-CCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccccc
Confidence 9999999999999975433 589999999999999999999999 999999999999999999999999999986543
Q ss_pred cCCCC--CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCC-cHHHHHHHhhcCCcccccccC
Q 006178 518 RSEKN--PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKG-NLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 518 ~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 593 (658)
..... ......++..|+|||.+.+..++.++|||||||++|||+| |.+||..... .........
T Consensus 245 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~------------ 312 (373)
T 3c1x_A 245 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG------------ 312 (373)
T ss_dssp -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTT------------
T ss_pred cccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcC------------
Confidence 22111 1112223456999999999999999999999999999999 6778764432 222221111
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCch
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 641 (658)
.....+...+..+.+++.+||+.||++|||+.|+++.|+++......
T Consensus 313 -~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~ 359 (373)
T 3c1x_A 313 -RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 359 (373)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred -CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccc
Confidence 00111223446788999999999999999999999999998876544
No 57
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.2e-41 Score=348.79 Aligned_cols=253 Identities=18% Similarity=0.214 Sum_probs=199.8
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeecccc--chhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW--TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.+.||+|+||.||+|+.. ++..+|+|.+....... .....+.+.+|+.++++++||||+++++++.+.. ..+
T Consensus 13 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~ 90 (326)
T 2y0a_A 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVI 90 (326)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEE
T ss_pred eEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEE
Confidence 445689999999999999986 57889999886544221 1223567999999999999999999999999877 789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC----Cceeccccch
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF----SPKLVDFDSW 512 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGla 512 (658)
+||||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||++++++ .+||+|||++
T Consensus 91 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp EEEECCCSCBHHHHHTTSS--CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEcCCCCCHHHHHHhcC--CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 9999999999999997543 599999999999999999999999 999999999999999887 7999999999
Q ss_pred hhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccccccc
Q 006178 513 KTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVV 592 (658)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (658)
+....... .....++..|+|||.+.+..++.++|||||||++|||+||+.||...... ................
T Consensus 166 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~~~~~~~~~~~~- 239 (326)
T 2y0a_A 166 HKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ETLANVSAVNYEFEDE- 239 (326)
T ss_dssp EECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHHHHTCCCCCHH-
T ss_pred eECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--HHHHHHHhcCCCcCcc-
Confidence 86532221 12233567799999999999999999999999999999999999654321 1111111110000000
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.....+..+.+++.+||+.||++|||+.|+++.
T Consensus 240 ------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 240 ------YFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp ------HHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ------ccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 001123568899999999999999999999874
No 58
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.4e-42 Score=353.53 Aligned_cols=272 Identities=13% Similarity=0.134 Sum_probs=208.8
Q ss_pred hcccccCCCCeeEEEEEe-cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.||+|+||.||+|++ .+++.||+|.+..... .+.+.+|+.+++++ +|+|++++++++.+.. ..++||
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~--~~~lv~ 85 (298)
T 1csn_A 14 VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD------APQLRDEYRTYKLLAGCTGIPNVYYFGQEGL--HNVLVI 85 (298)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT------SCCHHHHHHHHHHTTTCTTCCCEEEEEEETT--EEEEEE
T ss_pred EEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc------cHHHHHHHHHHHHHhcCCCCCeEEeecCCCc--eeEEEE
Confidence 448899999999999997 4678899998743322 23478899999999 8999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC-----ceeccccchhh
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS-----PKLVDFDSWKT 514 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~-----~kl~DFGla~~ 514 (658)
||+ +++|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||+++.
T Consensus 86 e~~-~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~ 160 (298)
T 1csn_A 86 DLL-GPSLEDLLDLCGR-KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160 (298)
T ss_dssp ECC-CCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred Eec-CCCHHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence 999 8999999986533 599999999999999999999999 9999999999999987776 99999999987
Q ss_pred hhhcCCC-----CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCCccc
Q 006178 515 ILARSEK-----NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELPEVM 588 (658)
Q Consensus 515 ~~~~~~~-----~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~ 588 (658)
....... .......++..|+|||.+.+..++.++|||||||++|||+||+.||...... .............
T Consensus 161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-- 238 (298)
T 1csn_A 161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ-- 238 (298)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH--
T ss_pred cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhcc--
Confidence 6433221 1122234567799999999999999999999999999999999999764321 1111111110000
Q ss_pred ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCchhhhccchhHHhhh
Q 006178 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVELKASSLAWAEL 654 (658)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~l 654 (658)
...........+..+.+++.+||+.||++|||+++|++.|+++...... ....+.+|.+|
T Consensus 239 ----~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~--~~~~~~dw~~l 298 (298)
T 1csn_A 239 ----STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT--TEDENFDWNLL 298 (298)
T ss_dssp ----HSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC--CSCSCCGGGCC
T ss_pred ----CccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCC--CCCCccccCCC
Confidence 0000000112346788999999999999999999999999998764322 23467888764
No 59
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.2e-42 Score=358.11 Aligned_cols=262 Identities=21% Similarity=0.296 Sum_probs=201.2
Q ss_pred hhcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCC
Q 006178 361 DFSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPF 433 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~ 433 (658)
.+.+.||+|+||.||+|++. ++..||+|.+..... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus 48 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~-- 122 (344)
T 1rjb_A 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD---SSEREALMSELKMMTQLGSHENIVNLLGACTLSG-- 122 (344)
T ss_dssp EEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred eeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC---HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC--
Confidence 34589999999999999962 345799998854321 22346789999999999 9999999999998877
Q ss_pred ceEEEEEecCCCChhhhhccCCC---------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCC
Q 006178 434 TRMLVFDYASNGTLYEHLHYGER---------------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELN 492 (658)
Q Consensus 434 ~~~lv~E~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlk 492 (658)
..++||||+++|+|.+++..... ..+++..+..++.||+.||+|||++ +|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence 67999999999999999975432 2389999999999999999999999 99999999
Q ss_pred CcceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCC
Q 006178 493 SSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDK 571 (658)
Q Consensus 493 p~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~ 571 (658)
|+||+++.++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999987643322211112223456999999999999999999999999999998 999997654
Q ss_pred CcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCch
Q 006178 572 GNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 641 (658)
...... ....... . ...+...+..+.+++.+||+.||.+|||+.|+++.|+.+.....+
T Consensus 280 ~~~~~~--~~~~~~~------~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 338 (344)
T 1rjb_A 280 VDANFY--KLIQNGF------K---MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEE 338 (344)
T ss_dssp CSHHHH--HHHHTTC------C---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred cHHHHH--HHHhcCC------C---CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHH
Confidence 322111 1111100 0 011223346788999999999999999999999999998775443
No 60
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=8.1e-42 Score=348.11 Aligned_cols=260 Identities=24% Similarity=0.359 Sum_probs=193.1
Q ss_pred hhhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.+.||+|+||.||+|++.+ .+|+|++..... .....+.+.+|++++++++||||+++++++... ..++||
T Consensus 26 y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~lv~ 98 (289)
T 3og7_A 26 ITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAP--TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP---QLAIVT 98 (289)
T ss_dssp CEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEE
T ss_pred eeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCC--CHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCC---ccEEEE
Confidence 3345899999999999998754 589988754432 234456799999999999999999999976543 468999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++++|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 99 e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 174 (289)
T 3og7_A 99 QWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174 (289)
T ss_dssp ECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC---------
T ss_pred EecCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccccc
Confidence 9999999999997543 3599999999999999999999999 99999999999999999999999999987654322
Q ss_pred CCCCCcccccCccccCCcccc---cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 520 EKNPGTLGSQGAICILPSSLE---ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~---~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
.........++..|+|||.+. +..++.++||||||+++|||+||+.||....... ......... ...+..
T Consensus 175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~------~~~~~~ 247 (289)
T 3og7_A 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIEMVGRG------SLSPDL 247 (289)
T ss_dssp ---------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH-HHHHHHHHT------SCCCCT
T ss_pred ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH-HHHHHhccc------ccCcch
Confidence 222222234567799999986 5678999999999999999999999997543321 111111110 011122
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
.......+..+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 248 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 248 SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 22233445678899999999999999999999999998764
No 61
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.9e-41 Score=347.44 Aligned_cols=266 Identities=16% Similarity=0.196 Sum_probs=205.9
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++.. ++.||+|++..... ....+.+.+|++++++++||||+++++++........++|||
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 89 (319)
T 4euu_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (319)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEE
T ss_pred EEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc---cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEe
Confidence 45899999999999999874 78899998753322 122456789999999999999999999998766556799999
Q ss_pred ecCCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee----cCCCCceeccccchhhh
Q 006178 441 YASNGTLYEHLHYGER-CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL----TEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl----~~~~~~kl~DFGla~~~ 515 (658)
|+++|+|.+++..... ..+++.++..++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++..
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~ 166 (319)
T 4euu_A 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (319)
T ss_dssp CCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEEC
T ss_pred CCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCceec
Confidence 9999999999985432 2499999999999999999999999 99999999999999 77888999999999765
Q ss_pred hhcCCCCCCcccccCccccCCcccc--------cCCCCccccchhhHHHHHHHHhCCCCCCCCCC--cHHHHHHHhhc-C
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLE--------ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG--NLVDWAKDYLE-L 584 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~--------~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~--~~~~~~~~~~~-~ 584 (658)
..... .....++..|+|||.+. +..++.++|||||||++|||+||+.||..... ........... .
T Consensus 167 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 243 (319)
T 4euu_A 167 EDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243 (319)
T ss_dssp CTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHC
T ss_pred CCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCC
Confidence 43221 12223567799999986 57899999999999999999999999964321 11222222111 1
Q ss_pred C-ccccccc---------C---CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 585 P-EVMSYVV---------D---PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 585 ~-~~~~~~~---------~---~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
+ ....... . +............+.+++.+||+.||++|||++|+++...+..
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred CcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 1 1111000 0 1112346778889999999999999999999999999988654
No 62
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.3e-41 Score=350.23 Aligned_cols=259 Identities=17% Similarity=0.167 Sum_probs=195.6
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|++.+++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 25 ~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~ 100 (311)
T 3niz_A 25 KLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE--DEGIPSTAIREISLLKELHHPNIVSLIDVIHSER--CLTLVFEF 100 (311)
T ss_dssp EEEEEEECSSCEEEEEEETTSCEEEEEEEC--------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS--CEEEEEEC
T ss_pred hhhhccCCCCeEEEEEEECCCCEEEEEEEecccc--cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC--EEEEEEcC
Confidence 3488999999999999998899999999854432 2233467889999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
++ |+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 101 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 175 (311)
T 3niz_A 101 ME-KDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS 175 (311)
T ss_dssp CS-EEHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred CC-CCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCccc
Confidence 97 48888887544 3599999999999999999999999 9999999999999999999999999999865422221
Q ss_pred CCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCCc--cccccc-----
Q 006178 522 NPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELPE--VMSYVV----- 592 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~~--~~~~~~----- 592 (658)
.....++..|+|||.+.+ ..++.++|||||||++|||+||+.||..... .....+......+. ......
T Consensus 176 --~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3niz_A 176 --YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253 (311)
T ss_dssp ----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred --ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchh
Confidence 122334677999999876 5689999999999999999999999975432 22222222211110 000000
Q ss_pred -CCcC---CCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 593 -DPEL---KHF-----SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 593 -~~~~---~~~-----~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.... ... .+..+.++.+|+.+||+.||++|||++|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0000 000 11223568899999999999999999999863
No 63
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.1e-41 Score=353.21 Aligned_cols=254 Identities=17% Similarity=0.192 Sum_probs=196.0
Q ss_pred hcccccCCCCeeEEEEEecC-CCe----EEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPE----IAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~----vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.||+|+||.||+|++.. +.. +|+|.+..... ....+.+.+|+.++++++||||+++++++.+. ..+
T Consensus 17 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~ 90 (325)
T 3kex_A 17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG---RQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGS---SLQ 90 (325)
T ss_dssp EEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS---CSCBCSCCHHHHHHHTCCCTTBCCEEEEECBS---SEE
T ss_pred eeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc---HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC---ccE
Confidence 34889999999999999753 444 56665532221 11223577899999999999999999998643 578
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 91 ~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 166 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLP 166 (325)
T ss_dssp EEEECCTTCBSHHHHHSSG-GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred EEEEeCCCCCHHHHHHHcc-ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccC
Confidence 9999999999999997543 3689999999999999999999999 99999999999999999999999999998765
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcH-HHHHHHhhcCCcccccccCC
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNL-VDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 594 (658)
............++..|+|||.+.+..++.++|||||||++|||+| |+.||....... ......... ..
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~------- 237 (325)
T 3kex_A 167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGER--LA------- 237 (325)
T ss_dssp CCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCB--CC-------
T ss_pred cccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC--CC-------
Confidence 4333222233334457999999999999999999999999999999 999997654322 222111100 00
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
.+...+..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 238 ----~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 238 ----QPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp ----CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred ----CCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 1111223466999999999999999999999999987643
No 64
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=6.3e-42 Score=345.15 Aligned_cols=252 Identities=22% Similarity=0.355 Sum_probs=201.1
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|+++ ++.+|+|.+..... .....+.+.+|+.++++++||||+++++++.+.+....++||||
T Consensus 14 ~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 90 (271)
T 3kmu_A 14 FLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDW--STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHW 90 (271)
T ss_dssp EEEEEEEETTEEEEEEEET-TEEEEEEEECCTTC--CHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEEC
T ss_pred HHHHhcCCCcceEEEEEEC-CeeEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecc
Confidence 4589999999999999986 78899998855432 23345679999999999999999999999988743377999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
+++|+|.+++.......+++.++..++.|++.||+|||++ + |+||||||+||++++++.+||+|||++.....
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-- 165 (271)
T 3kmu_A 91 MPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-- 165 (271)
T ss_dssp CTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC--
T ss_pred cCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeecc--
Confidence 9999999999876655699999999999999999999998 7 99999999999999999999998887653211
Q ss_pred CCCCCcccccCccccCCcccccCCCCc---cccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDV---QGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~---ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
....++..|+|||.+.+..++. ++||||||+++|||+||+.||........ ........ ..
T Consensus 166 -----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~~~~------~~--- 229 (271)
T 3kmu_A 166 -----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI--GMKVALEG------LR--- 229 (271)
T ss_dssp -----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH--HHHHHHSC------CC---
T ss_pred -----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH--HHHHHhcC------CC---
Confidence 1123456799999998765544 89999999999999999999975432211 11111110 00
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
...+...+..+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 230 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 230 PTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 11222344668899999999999999999999999998764
No 65
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-41 Score=351.09 Aligned_cols=247 Identities=11% Similarity=0.159 Sum_probs=196.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.+|+|.+.... .....+.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus 9 ~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~e 81 (321)
T 1tki_A 9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-----TDQVLVKKEISILNIARHRNILHLHESFESME--ELVMIFE 81 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-----HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT--EEEEEEC
T ss_pred eeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-----ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC--EEEEEEE
Confidence 4588999999999999987 46778888774322 23456889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC--CCCceeccccchhhhhhc
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE--DFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~--~~~~kl~DFGla~~~~~~ 518 (658)
|+++|+|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+|||++. ++.+||+|||+++.+...
T Consensus 82 ~~~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~ 157 (321)
T 1tki_A 82 FISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157 (321)
T ss_dssp CCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred eCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC
Confidence 999999999997543 3599999999999999999999999 9999999999999997 789999999998765321
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
. ......+++.|+|||.+.+..++.++|||||||++|||++|+.||..... ................. ..
T Consensus 158 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~~~~~~~~~---~~-- 227 (321)
T 1tki_A 158 D---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN--QQIIENIMNAEYTFDEE---AF-- 227 (321)
T ss_dssp C---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHHTCCCCCHH---HH--
T ss_pred C---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH--HHHHHHHHcCCCCCChh---hh--
Confidence 1 11223356679999999988899999999999999999999999975432 22222221111100000 00
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+.++.+++.+||+.||++|||+.|+++.
T Consensus 228 --~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 228 --KEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp --TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1124568899999999999999999999985
No 66
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.1e-42 Score=360.30 Aligned_cols=259 Identities=20% Similarity=0.315 Sum_probs=205.7
Q ss_pred hcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 362 FSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+.+.||+|+||.||+|++. .++.||+|.+.... .......+.+|++++++++||||+++++++.+.+ ..
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~ 103 (322)
T 1p4o_A 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ--PT 103 (322)
T ss_dssp EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS---CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS--SC
T ss_pred eeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc---CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC--cc
Confidence 4589999999999999875 36778888874322 2234457899999999999999999999998877 67
Q ss_pred EEEEEecCCCChhhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceec
Q 006178 436 MLVFDYASNGTLYEHLHYGE--------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLV 507 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~ 507 (658)
++||||+++|+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl~ 180 (322)
T 1p4o_A 104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIG 180 (322)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEEC
Confidence 99999999999999987421 13579999999999999999999999 99999999999999999999999
Q ss_pred cccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCc
Q 006178 508 DFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPE 586 (658)
Q Consensus 508 DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 586 (658)
|||+++...............++..|+|||.+.+..++.++||||||+++|||+| |+.||...... .........
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~-- 256 (322)
T 1p4o_A 181 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE--QVLRFVMEG-- 256 (322)
T ss_dssp CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH--HHHHHHHTT--
T ss_pred cCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH--HHHHHHHcC--
Confidence 9999987644332222223334567999999999999999999999999999999 89998654321 111111111
Q ss_pred ccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCc
Q 006178 587 VMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640 (658)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 640 (658)
.....+...+..+.+++.+||+.||++|||+.|+++.|+++.....
T Consensus 257 --------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~ 302 (322)
T 1p4o_A 257 --------GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 302 (322)
T ss_dssp --------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTH
T ss_pred --------CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCC
Confidence 1111223344668899999999999999999999999999877543
No 67
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=6.1e-42 Score=353.11 Aligned_cols=258 Identities=18% Similarity=0.269 Sum_probs=204.4
Q ss_pred hhhcccccCCCCeeEEEEEe------cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCC
Q 006178 360 EDFSNIIGSSPDSLVYKGTM------KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSP 432 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~------~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 432 (658)
+.+.+.||+|+||.||+|++ .++..||+|.+.... .....+.+.+|+.+++++ +||||+++++++.+.+
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~- 100 (313)
T 1t46_A 25 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA---HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG- 100 (313)
T ss_dssp EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred hhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch---hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC-
Confidence 34458999999999999985 245688888875322 223456799999999999 9999999999998877
Q ss_pred CceEEEEEecCCCChhhhhccCCC----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcce
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGER----------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAV 496 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NI 496 (658)
..++||||+++|+|.+++..... ..+++.++..++.|+++||+|||++ +|+||||||+||
T Consensus 101 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Ni 176 (313)
T 1t46_A 101 -PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNI 176 (313)
T ss_dssp -SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred -CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceE
Confidence 67999999999999999975432 2489999999999999999999999 999999999999
Q ss_pred eecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHH
Q 006178 497 YLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLV 575 (658)
Q Consensus 497 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~ 575 (658)
++++++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||+| |+.||........
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 256 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH
Confidence 999999999999999886543322111112223456999999999999999999999999999999 9999976543221
Q ss_pred --HHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 576 --DWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 576 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
........ . ..+...+..+.+++.+||+.||.+|||+.|+++.|+++...
T Consensus 257 ~~~~~~~~~~----------~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 257 FYKMIKEGFR----------M---LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp HHHHHHHTCC----------C---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHhccCCC----------C---CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 11111100 0 11122346688999999999999999999999999987653
No 68
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.2e-42 Score=355.73 Aligned_cols=254 Identities=19% Similarity=0.228 Sum_probs=194.5
Q ss_pred hcccccCCCCeeEEEEEec-CCCeE----EEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEI----AVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~v----avk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.||+|+||.||+|++. +++.+ ++|.+.... .....+.+.+|+.++++++||||+++++++.... .+
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~---~~ 92 (327)
T 3lzb_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTST---VQ 92 (327)
T ss_dssp EEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS---SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS---EE
T ss_pred EEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc---CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC---ce
Confidence 3489999999999999975 44444 555443221 2234567899999999999999999999998754 68
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+|+||+++|+|.+++..... .+++..++.|+.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred EEEEecCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 99999999999999976543 599999999999999999999999 99999999999999999999999999998765
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHH-HHHHHhhcCCcccccccCC
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLV-DWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 594 (658)
............++..|+|||.+.+..++.++|||||||++|||+| |+.||........ ......
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~------------- 235 (327)
T 3lzb_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG------------- 235 (327)
T ss_dssp -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-------------
T ss_pred CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC-------------
Confidence 4333333333344567999999999999999999999999999999 9999976543322 111111
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
.....+...+..+.+++.+||+.||.+|||+.|+++.|+++...
T Consensus 236 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 236 ERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 01112223445688999999999999999999999999998754
No 69
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.9e-42 Score=352.52 Aligned_cols=255 Identities=21% Similarity=0.287 Sum_probs=205.6
Q ss_pred hhhcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||.||+|.+.. +..+|+|.+.... ...+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 15 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~~v 87 (288)
T 3kfa_A 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYII 87 (288)
T ss_dssp EEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-----THHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SEEEE
T ss_pred eeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-----HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CEEEE
Confidence 3345899999999999999875 6778888874322 23467899999999999999999999998877 67999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||+++|+|.+++.......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 164 (288)
T 3kfa_A 88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164 (288)
T ss_dssp EECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred EEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence 9999999999999876666799999999999999999999999 9999999999999999999999999998765322
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc-HHHHHHHhhcCCcccccccCCcC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN-LVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
.. .......++..|+|||.+.+..++.++||||||+++|||++ |..||...... ......... .
T Consensus 165 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~-------------~ 230 (288)
T 3kfa_A 165 TY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY-------------R 230 (288)
T ss_dssp SS-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC-------------C
T ss_pred cc-ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccC-------------C
Confidence 11 11111222456999999999999999999999999999999 99999754432 221111110 0
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
...+...+..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 231 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 112223346788999999999999999999999999987753
No 70
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.7e-42 Score=346.22 Aligned_cols=253 Identities=19% Similarity=0.248 Sum_probs=203.2
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|++.+++.+|+|.+..... ..+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 84 (267)
T 3t9t_A 12 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVTEF 84 (267)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SCEEEECC
T ss_pred eeeEecCCCceeEEEEEecCCCeEEEEEccccCC-----CHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CeEEEEeC
Confidence 4588999999999999998888999998854322 2357899999999999999999999998877 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++++|.+++..... .+++..+..++.|++.||+|||++ +++||||||+||++++++.+||+|||+++........
T Consensus 85 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 160 (267)
T 3t9t_A 85 MEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 160 (267)
T ss_dssp CTTCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred CCCCcHHHHHhhCcc-cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccc
Confidence 999999999976533 589999999999999999999999 9999999999999999999999999998765321110
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
......++..|+|||.+.+..++.++||||||+++|||+| |+.||...... .......... ....+
T Consensus 161 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~i~~~~----------~~~~~ 227 (267)
T 3t9t_A 161 -SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTGF----------RLYKP 227 (267)
T ss_dssp -STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTC----------CCCCC
T ss_pred -ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH--HHHHHHhcCC----------cCCCC
Confidence 1111223456999999998999999999999999999999 89999654321 1111111110 00112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
...+..+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 228 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 22346688999999999999999999999999988653
No 71
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=3.2e-41 Score=350.35 Aligned_cols=247 Identities=17% Similarity=0.139 Sum_probs=198.3
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.||+|.+..... ......+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 9 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~--~~~lv~E 85 (337)
T 1o6l_A 9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI-IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--RLCFVME 85 (337)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHh-hhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC--EEEEEEe
Confidence 3489999999999999986 578899998854321 11223457889999999999999999999999887 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 86 ~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 86 YANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp CCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred CCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 999999999997543 489999999999999999999999 999999999999999999999999999875322211
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
......++..|+|||.+.+..++.++|||||||++|||++|+.||..... ............ .++
T Consensus 161 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~~~-----------~~p 225 (337)
T 1o6l_A 161 --TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELILMEEI-----------RFP 225 (337)
T ss_dssp --CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCC-----------CCC
T ss_pred --cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH--HHHHHHHHcCCC-----------CCC
Confidence 12223356779999999999999999999999999999999999975432 222222111110 122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRP-----SMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 631 (658)
...+..+.+++.+||+.||++|| +++|+++.
T Consensus 226 ~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 226 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 23346688999999999999999 89998764
No 72
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=7.4e-42 Score=346.93 Aligned_cols=254 Identities=18% Similarity=0.267 Sum_probs=191.9
Q ss_pred hhhcccccCCCCeeEEEEEecC----CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+.+.+.||+|+||.||+|++.. +..+|+|..... ......+.+.+|+.++++++||||+++++++.+ + ..
T Consensus 17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~--~~ 90 (281)
T 1mp8_A 17 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC---TSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N--PV 90 (281)
T ss_dssp EEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT---TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-S--SC
T ss_pred eEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc---CCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc-C--cc
Confidence 3345899999999999999753 345777776322 223445679999999999999999999999854 3 46
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp EEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred EEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccccc
Confidence 89999999999999997553 3589999999999999999999999 9999999999999999999999999999876
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc-HHHHHHHhhcCCcccccccC
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN-LVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 593 (658)
..... .....+.++..|+|||.+.+..++.++||||||+++|||++ |..||...... ....+..
T Consensus 167 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~------------- 232 (281)
T 1mp8_A 167 EDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN------------- 232 (281)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-------------
T ss_pred Ccccc-cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHc-------------
Confidence 43221 12223334567999999999999999999999999999997 99999754432 1111111
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
......+...+..+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 233 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 233 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 11111223345678899999999999999999999999998764
No 73
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=6.7e-42 Score=356.30 Aligned_cols=259 Identities=22% Similarity=0.248 Sum_probs=204.4
Q ss_pred hhhcccccCCCCeeEEEEEec--------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecC
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK--------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRES 430 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~--------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~ 430 (658)
+.+.+.||+|+||.||+|++. ++..||+|.+.... .....+.+.+|+++++++ +||||+++++++.+.
T Consensus 37 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp EEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred eEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC---cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 334589999999999999874 45679998874322 233456789999999999 999999999999887
Q ss_pred CCCceEEEEEecCCCChhhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcce
Q 006178 431 SPFTRMLVFDYASNGTLYEHLHYGER--------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAV 496 (658)
Q Consensus 431 ~~~~~~lv~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NI 496 (658)
+ ..++||||+++|+|.+++..... ..+++.+++.++.||++||+|||++ +|+||||||+||
T Consensus 114 ~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 188 (334)
T 2pvf_A 114 G--PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV 188 (334)
T ss_dssp S--CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred C--ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceE
Confidence 7 67999999999999999975432 2489999999999999999999999 999999999999
Q ss_pred eecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHH
Q 006178 497 YLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLV 575 (658)
Q Consensus 497 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~ 575 (658)
+++.++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||+| |+.||......
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-- 266 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-- 266 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH--
Confidence 999999999999999876543322222233334567999999998899999999999999999999 99999654322
Q ss_pred HHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 576 DWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
+......... ....+...+..+.+++.+||+.||.+|||+.|+++.|+++...
T Consensus 267 ~~~~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~ 319 (334)
T 2pvf_A 267 ELFKLLKEGH----------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319 (334)
T ss_dssp HHHHHHHHTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC----------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 2111111110 0111223346688999999999999999999999999998754
No 74
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.8e-41 Score=345.34 Aligned_cols=259 Identities=17% Similarity=0.185 Sum_probs=195.2
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|+..+++.+|+|++...... ....+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 81 (288)
T 1ob3_A 6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED--EGIPSTTIREISILKELKHSNIVKLYDVIHTKK--RLVLVFEH 81 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGG--GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS--CEEEEEEC
T ss_pred hhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccc--cccchhHHHHHHHHHhcCCCCEeeeeeEEccCC--eEEEEEEe
Confidence 34789999999999999988999999998544321 223356889999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++ +|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++........
T Consensus 82 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 156 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK 156 (288)
T ss_dssp CSE-EHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred cCC-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccccc
Confidence 975 9999987543 3589999999999999999999999 9999999999999999999999999999875422211
Q ss_pred CCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcH-HHHHHHhhcCCc--cccc-----cc
Q 006178 522 NPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-VDWAKDYLELPE--VMSY-----VV 592 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-~~~~~~~~~~~~--~~~~-----~~ 592 (658)
.....++..|+|||.+.+ ..++.++|||||||++|||+||+.||....... ..........+. .... ..
T Consensus 157 --~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 157 --YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred --cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccc
Confidence 122234667999999876 458999999999999999999999997543211 111111111100 0000 00
Q ss_pred CCcCC--------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 593 DPELK--------HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 593 ~~~~~--------~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
++... ......+..+.+++.+||+.||++|||+.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 11110 1112244668899999999999999999998763
No 75
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=7.5e-41 Score=351.64 Aligned_cols=251 Identities=19% Similarity=0.184 Sum_probs=198.3
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||.||+|.+. ++..||+|.+..... .....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 31 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~lv 106 (362)
T 2bdw_A 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYLV 106 (362)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred eEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEE
Confidence 444589999999999999986 578899998854432 2334567899999999999999999999999887 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC---Cceeccccchhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF---SPKLVDFDSWKTI 515 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGla~~~ 515 (658)
|||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||++.++ .+||+|||+++..
T Consensus 107 ~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 107 FDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp ECCCCSCBHHHHHTTCS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred EecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 99999999999997553 589999999999999999999999 999999999999998654 5999999998765
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
..... .....++..|+|||++.+..++.++|||||||++|||+||+.||..... ............. ...+.
T Consensus 182 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--~~~~~~i~~~~~~---~~~~~ 253 (362)
T 2bdw_A 182 NDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYAQIKAGAYD---YPSPE 253 (362)
T ss_dssp TTCCS---CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTCCC---CCTTG
T ss_pred cCCcc---cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhCCCC---CCccc
Confidence 42211 1223356679999999999999999999999999999999999975432 1221111111000 00111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 254 ~----~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 254 W----DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp G----GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred c----cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1 1234568899999999999999999999865
No 76
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=9.5e-41 Score=359.13 Aligned_cols=252 Identities=17% Similarity=0.169 Sum_probs=197.9
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||.||+|... +++.+|+|++..+.. .....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 13 Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~lv 88 (444)
T 3soa_A 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL--SARDHQKLEREARICRLLKHPNIVRLHDSISEEG--HHYLI 88 (444)
T ss_dssp EEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC--HHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS--EEEEE
T ss_pred eEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC--EEEEE
Confidence 344589999999999999975 678889988765432 2334567899999999999999999999999887 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec---CCCCceeccccchhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT---EDFSPKLVDFDSWKTI 515 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~---~~~~~kl~DFGla~~~ 515 (658)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++ +++.+||+|||+++..
T Consensus 89 ~E~~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp ECCCBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 99999999999998654 499999999999999999999999 999999999999998 4578999999999765
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
....... ....+++.|+|||++.+..++.++||||+||++|||++|+.||...... ........... ....+.
T Consensus 164 ~~~~~~~--~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~--~~~~~i~~~~~---~~~~~~ 236 (444)
T 3soa_A 164 EGEQQAW--FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH--RLYQQIKAGAY---DFPSPE 236 (444)
T ss_dssp CTTCCBC--CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHTCC---CCCTTT
T ss_pred cCCCcee--ecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH--HHHHHHHhCCC---CCCccc
Confidence 4322211 2233567799999999999999999999999999999999999654321 21121111110 111111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. ..+..+.+++.+||+.||++|||+.|+++.
T Consensus 237 ~~----~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 237 WD----TVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cc----cCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 11 234568899999999999999999999874
No 77
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-41 Score=353.56 Aligned_cols=245 Identities=14% Similarity=0.192 Sum_probs=196.4
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.||+|.+...... .....+.+.+|+++++.++||||+++++++.+.+ ..++|||
T Consensus 13 i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~lv~E 89 (336)
T 3h4j_B 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLK-KSDMHMRVEREISYLKLLRHPHIIKLYDVITTPT--DIVMVIE 89 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHcc-chhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEEEE
Confidence 4589999999999999974 6788999988543211 1223357889999999999999999999999887 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+ +|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||++........
T Consensus 90 ~~-~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~ 163 (336)
T 3h4j_B 90 YA-GGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF 163 (336)
T ss_dssp CC-CEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT
T ss_pred CC-CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCcc
Confidence 99 789999987554 499999999999999999999999 999999999999999999999999999986543221
Q ss_pred CCCCcccccCccccCCcccccCCC-CccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHL-DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.....++..|+|||.+.+..+ ++++|||||||++|||++|+.||...... ..... +.......
T Consensus 164 ---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~------------~~~~~-i~~~~~~~ 227 (336)
T 3h4j_B 164 ---LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP------------NLFKK-VNSCVYVM 227 (336)
T ss_dssp ---TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST------------TCBCC-CCSSCCCC
T ss_pred ---cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH------------HHHHH-HHcCCCCC
Confidence 122335677999999988776 78999999999999999999999643211 11111 11111123
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+++.+||+.||.+|||++|+++.
T Consensus 228 p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 228 PDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 33445678899999999999999999999875
No 78
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.1e-41 Score=351.20 Aligned_cols=259 Identities=24% Similarity=0.347 Sum_probs=193.7
Q ss_pred hcccccCCCCeeEEEEEecC----CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCC---c
Q 006178 362 FSNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF---T 434 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~---~ 434 (658)
+.+.||+|+||.||+|+... +..||+|.+..... .....+.+.+|+.++++++||||+++++++.+.+.. .
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 115 (313)
T 3brb_A 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS--SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPK 115 (313)
T ss_dssp EEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC--CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------C
T ss_pred eccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc--chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcc
Confidence 34889999999999998653 34789998754332 233456789999999999999999999999875522 3
Q ss_pred eEEEEEecCCCChhhhhccC----CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceecccc
Q 006178 435 RMLVFDYASNGTLYEHLHYG----ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFD 510 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 510 (658)
.++||||+++|+|.+++... ....+++..++.++.|+++||+|||++ +|+||||||+||++++++.+||+|||
T Consensus 116 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~Dfg 192 (313)
T 3brb_A 116 PMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFG 192 (313)
T ss_dssp EEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEECSCS
T ss_pred cEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEeecC
Confidence 59999999999999998532 234699999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc-HHHHHHHhhcCCccc
Q 006178 511 SWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN-LVDWAKDYLELPEVM 588 (658)
Q Consensus 511 la~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~ 588 (658)
+++.+.............++..|+|||.+.+..++.++||||||+++|||+| |..||...... ...... ..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~---~~---- 265 (313)
T 3brb_A 193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLL---HG---- 265 (313)
T ss_dssp CC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH---TT----
T ss_pred cceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHH---cC----
Confidence 9987644332222333344567999999999999999999999999999999 89998654432 111111 11
Q ss_pred ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
.....+...+..+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 266 ------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 266 ------HRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp ------CCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ------CCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 11112223446788999999999999999999999999988654
No 79
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.7e-41 Score=359.30 Aligned_cols=264 Identities=15% Similarity=0.183 Sum_probs=199.4
Q ss_pred hhcccccCC--CCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 361 DFSNIIGSS--PDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 361 ~f~~~lG~G--~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
.+.+.||+| +||.||+|++. +++.||+|++..... .....+.+.+|+.++++++|||||++++++.+.+ ..++
T Consensus 28 ~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~l 103 (389)
T 3gni_B 28 ELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC--SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN--ELWV 103 (389)
T ss_dssp EEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEE
T ss_pred EEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc--ChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC--EEEE
Confidence 345899999 99999999987 688999998865432 2344567889999999999999999999999887 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+++|+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 99999999999999876555699999999999999999999999 999999999999999999999999998765432
Q ss_pred cCC-----CCCCcccccCccccCCccccc--CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHH--HHHhhcC----
Q 006178 518 RSE-----KNPGTLGSQGAICILPSSLEA--RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDW--AKDYLEL---- 584 (658)
Q Consensus 518 ~~~-----~~~~~~~~~~~~~~aPE~~~~--~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~--~~~~~~~---- 584 (658)
... ........++..|+|||.+.+ ..++.++|||||||++|||+||+.||.......... .......
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 260 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccc
Confidence 111 111122244567999999987 679999999999999999999999997543221110 0000000
Q ss_pred C----cc-------------ccccc----------CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 585 P----EV-------------MSYVV----------DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 585 ~----~~-------------~~~~~----------~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. .. ..... +......+...+..+.+|+.+||+.||++|||+.|+++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 0 00 00000 000001223345678999999999999999999999865
No 80
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.6e-41 Score=347.40 Aligned_cols=257 Identities=23% Similarity=0.310 Sum_probs=196.7
Q ss_pred hcccccCCCCeeEEEEEecCC----CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGG----PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
+.+.||+|+||.||+|++.++ ..+|+|.+... ......+.+.+|+.++++++||||+++++++.+.+. ..++
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~ 104 (298)
T 3f66_A 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLV 104 (298)
T ss_dssp EEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC---CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CCEE
T ss_pred hcceeeecCCceEEEEEEecCCCceeEEEEEecccC---CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC-ceEE
Confidence 458999999999999997532 24677766422 223345678999999999999999999999765432 5799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+++|+|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++....
T Consensus 105 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEECCTTCBHHHHHHCTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEeCCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccc
Confidence 999999999999997543 3589999999999999999999999 999999999999999999999999999986543
Q ss_pred cCCC--CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc-HHHHHHHhhcCCcccccccC
Q 006178 518 RSEK--NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN-LVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 518 ~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 593 (658)
.... .......++..|+|||.+.+..++.++||||||+++|||+| |.+||...... ....... .
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~---~--------- 248 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ---G--------- 248 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHT---T---------
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhc---C---------
Confidence 2211 11122223456999999999999999999999999999999 55666543321 1111111 1
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
.....+...+..+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 249 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 249 -RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred -CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 001112223456889999999999999999999999999987654
No 81
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-41 Score=352.53 Aligned_cols=258 Identities=20% Similarity=0.327 Sum_probs=198.1
Q ss_pred cccccCCCCeeEEEEEecCC-----CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 363 SNIIGSSPDSLVYKGTMKGG-----PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~~-----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
.+.||+|+||.||+|++... ..||+|.+.... .......+.+|++++++++||||+++++++.+.+ ..++
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~l 123 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY---TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK--PMMI 123 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEE
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC--CcEE
Confidence 47899999999999997532 358888874322 2334567899999999999999999999998877 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+++|+|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++....
T Consensus 124 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 199 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199 (333)
T ss_dssp EEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence 999999999999997543 2599999999999999999999999 999999999999999999999999999987643
Q ss_pred cCCCC-CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 518 RSEKN-PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 518 ~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
..... ....+.++..|+|||.+.+..++.++|||||||++|||+| |+.||...... ......... .
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~~~~~~~~~-~--------- 267 (333)
T 1mqb_A 200 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--EVMKAINDG-F--------- 267 (333)
T ss_dssp -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTT-C---------
T ss_pred ccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHCC-C---------
Confidence 32211 1122233457999999999999999999999999999999 99999654321 111111111 0
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCch
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 641 (658)
....+...+..+.+++.+||+.||++||++.|+++.|+++......
T Consensus 268 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 313 (333)
T 1mqb_A 268 RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS 313 (333)
T ss_dssp CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence 0111223446788999999999999999999999999998765443
No 82
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=4.8e-41 Score=351.99 Aligned_cols=256 Identities=16% Similarity=0.159 Sum_probs=198.3
Q ss_pred HhhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeecc-ccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 359 CEDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEE-HWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 359 ~~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~-~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
.+.+.+.||+|+||.||+|++. +++.||+|.+..... .......+.+.+|++++++++||||+++++++.+.+ ..+
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~ 102 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG--MLY 102 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEE
T ss_pred ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEE
Confidence 3455689999999999999986 578899998854321 111223567899999999999999999999999877 789
Q ss_pred EEEEecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC---ceeccccc
Q 006178 437 LVFDYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS---PKLVDFDS 511 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGl 511 (658)
+||||+++|+|.+++... ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999999887643 223589999999999999999999999 9999999999999986654 99999999
Q ss_pred hhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccc
Q 006178 512 WKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYV 591 (658)
Q Consensus 512 a~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (658)
++........ .....++..|+|||.+.+..++.++|||||||++|||+||+.||......... ...........
T Consensus 180 a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~---~i~~~~~~~~~- 253 (351)
T 3c0i_A 180 AIQLGESGLV--AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFE---GIIKGKYKMNP- 253 (351)
T ss_dssp CEECCTTSCB--CCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHH---HHHHTCCCCCH-
T ss_pred eeEecCCCee--ecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHH---HHHcCCCCCCc-
Confidence 9765432211 11223567799999999999999999999999999999999999754322111 11111000000
Q ss_pred cCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 592 VDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
... ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 254 --~~~----~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 254 --RQW----SHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp --HHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --ccc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000 1123568899999999999999999999863
No 83
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4.9e-42 Score=351.76 Aligned_cols=254 Identities=19% Similarity=0.254 Sum_probs=193.9
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHh--ccCCCccceeeEEecCC--CCceEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLAR--INHENTGKLLGYCRESS--PFTRML 437 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~--~~~~~l 437 (658)
+.+.||+|+||.||+|++ +++.||||++... ..+.+.+|.+++.. ++||||+++++++.+.. ....++
T Consensus 12 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 12 LLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 458999999999999998 5788999987432 23456667777766 79999999999875432 125799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhh--------hcCCCCeeeccCCCcceeecCCCCceeccc
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH--------TELGPPFTISELNSSAVYLTEDFSPKLVDF 509 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH--------~~~~~~ivHrDlkp~NILl~~~~~~kl~DF 509 (658)
||||+++|+|.++++.. .+++..+..++.|++.||+||| +. +|+||||||+|||++.++.+||+||
T Consensus 84 v~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp EECCCTTCBHHHHHTTC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCC
T ss_pred ehhhccCCCHHHHHhhc---ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeC
Confidence 99999999999999643 5899999999999999999999 77 9999999999999999999999999
Q ss_pred cchhhhhhcCCCC--CCcccccCccccCCcccccC------CCCccccchhhHHHHHHHHhC----------CCCCCCCC
Q 006178 510 DSWKTILARSEKN--PGTLGSQGAICILPSSLEAR------HLDVQGNIYAFGVLLLEIISG----------RPPCCKDK 571 (658)
Q Consensus 510 Gla~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~------~~~~ksDVwS~Gvvl~elltG----------~~p~~~~~ 571 (658)
|+++......... ......++..|+|||.+.+. .+++++|||||||++|||+|| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 9987654322111 11122456779999999876 456799999999999999999 88885422
Q ss_pred ---CcHHHHHHHhhcCCcccccccCCcCC--CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006178 572 ---GNLVDWAKDYLELPEVMSYVVDPELK--HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGR 635 (658)
Q Consensus 572 ---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~ 635 (658)
............. . ..+... ..+...+..+.+++.+||+.||++|||+.||++.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 238 PNDPSFEDMRKVVCVD-Q-----QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CSSCCHHHHHHHHTTS-C-----CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCcchhhhhHHHhcc-C-----CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1222221111111 0 011111 12345678899999999999999999999999999875
No 84
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.5e-41 Score=345.66 Aligned_cols=252 Identities=22% Similarity=0.331 Sum_probs=194.7
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|++. ++.||+|++... ...+.+.+|++++++++||||+++++++.+ ..++||||
T Consensus 12 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----~~~lv~e~ 80 (307)
T 2eva_A 12 VEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE------SERKAFIVELRQLSRVNHPNIVKLYGACLN----PVCLVMEY 80 (307)
T ss_dssp EEEEEECCSSSEEEEEEET-TEEEEEEECSST------THHHHHHHHHHHHHHCCCTTBCCEEEBCTT----TTEEEEEC
T ss_pred eeeEeecCCCceEEEEEEC-CeeEEEEEecCh------hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC----CcEEEEEc
Confidence 3488999999999999985 578999987321 234678999999999999999999998864 35899999
Q ss_pred cCCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC-ceeccccchhhhhhcC
Q 006178 442 ASNGTLYEHLHYGER-CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS-PKLVDFDSWKTILARS 519 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~-~kl~DFGla~~~~~~~ 519 (658)
+++|+|.+++..... ..+++..++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~ 160 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM 160 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc
Confidence 999999999986543 34789999999999999999999932129999999999999998886 7999999987653221
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
....++..|+|||.+.+..++.++||||||+++|||+||+.||................. .....
T Consensus 161 -----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~----------~~~~~ 225 (307)
T 2eva_A 161 -----TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNG----------TRPPL 225 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTT----------CCCCC
T ss_pred -----ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcC----------CCCCc
Confidence 122345679999999999999999999999999999999999975544332222111111 00111
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
+...+..+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 226 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 226 IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred ccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 1223456889999999999999999999999999887543
No 85
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3e-41 Score=352.61 Aligned_cols=250 Identities=16% Similarity=0.199 Sum_probs=192.6
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccC--CCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH--ENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.||+|+||.||++...+++.||+|++..... .....+.+.+|+.++++++| |||+++++++.+.+ ..++||
T Consensus 13 i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv~ 88 (343)
T 3dbq_A 13 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVM 88 (343)
T ss_dssp EEEEESCCSSEEEEEEECTTSCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEecCCCeEEEEEEeCCCCEEEEEEeecccc--chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC--EEEEEE
Confidence 4589999999999999998899999999864432 23345678999999999976 99999999999877 889999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
|+ .+|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||++ ++.+||+|||+++.+....
T Consensus 89 e~-~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 89 EC-GNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp CC-CSEEHHHHHHHSC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred eC-CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 95 5789999998654 489999999999999999999999 999999999999997 5789999999998764333
Q ss_pred CCCCCcccccCccccCCccccc-----------CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccc
Q 006178 520 EKNPGTLGSQGAICILPSSLEA-----------RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVM 588 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~-----------~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 588 (658)
.........++..|+|||++.+ ..++.++|||||||++|||+||+.||............ .......
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~-~~~~~~~- 239 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA-IIDPNHE- 239 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH-HHCTTSC-
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHH-HhcCCcc-
Confidence 2222223345678999999865 67899999999999999999999999754433322211 1111000
Q ss_pred ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006178 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTML 632 (658)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 632 (658)
..++...+..+.+++.+||+.||.+|||+.|+++.-
T Consensus 240 --------~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 240 --------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp --------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred --------cCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 011222235678999999999999999999998763
No 86
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=8.4e-42 Score=346.09 Aligned_cols=254 Identities=17% Similarity=0.278 Sum_probs=202.1
Q ss_pred hhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.+.+.||+|+||.||+|+..++..||+|.+..... ..+.+.+|++++++++||||+++++++.+. ..++|||
T Consensus 16 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~v~e 87 (279)
T 1qpc_A 16 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-----SPDAFLAEANLMKQLQHQRLVRLYAVVTQE---PIYIITE 87 (279)
T ss_dssp EEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEEE
T ss_pred hheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-----cHHHHHHHHHHHHhCCCcCcceEEEEEcCC---CcEEEEe
Confidence 34589999999999999998888999998743321 245789999999999999999999998743 4689999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.......+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.......
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T 1qpc_A 88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (279)
T ss_dssp CCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence 99999999999754433599999999999999999999999 999999999999999999999999999876532211
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
. ......++..|+|||.+.+..++.++||||||+++|||+| |+.||...... +......... ....
T Consensus 165 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~----------~~~~ 231 (279)
T 1qpc_A 165 T-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERGY----------RMVR 231 (279)
T ss_dssp E-CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTC----------CCCC
T ss_pred c-cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--HHHHHHhccc----------CCCC
Confidence 1 1111223456999999998899999999999999999999 99999654321 1211111110 0011
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
+...+..+.+++.+||+.||++|||+.++++.|+++...
T Consensus 232 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 223346788999999999999999999999999987653
No 87
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-41 Score=344.03 Aligned_cols=253 Identities=18% Similarity=0.233 Sum_probs=201.7
Q ss_pred ccccCCCCeeEEEEEec---CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 364 NIIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.||+|+||.||+|.+. ++..||+|.+.... .....+.+.+|++++++++||||+++++++.. + ..++|||
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~--~~~lv~e 89 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E--ALMLVME 89 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-S--SEEEEEE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCcc---chhHHHHHHHHHHHHHhCCCCCEeEEEEEecC-C--CcEEEEE
Confidence 48999999999999864 56678998875432 23345679999999999999999999999954 3 5799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 90 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 165 (287)
T 1u59_A 90 MAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165 (287)
T ss_dssp CCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred eCCCCCHHHHHHhCC-ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence 999999999997443 3599999999999999999999999 999999999999999999999999999886543221
Q ss_pred C-CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 521 K-NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 521 ~-~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
. .......++..|+|||.+.+..++.++||||||+++|||+| |+.||....... ........ ....
T Consensus 166 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~i~~~----------~~~~ 233 (287)
T 1u59_A 166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAFIEQG----------KRME 233 (287)
T ss_dssp EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH--HHHHHHTT----------CCCC
T ss_pred eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHhcC----------CcCC
Confidence 1 11122233567999999998899999999999999999999 999997544321 11111111 0112
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
.+...+..+.+++.+||+.||++||++.|+++.|+++...
T Consensus 234 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 273 (287)
T 1u59_A 234 CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 273 (287)
T ss_dssp CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 2334456788999999999999999999999999988653
No 88
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.7e-42 Score=355.33 Aligned_cols=266 Identities=18% Similarity=0.238 Sum_probs=199.6
Q ss_pred hhcccccCCCCeeEEEEEe-----cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 361 DFSNIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
...+.||+|+||.||+|++ .+++.||+|++..... ....+.+.+|++++++++||||+++++++.+.+....
T Consensus 24 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 24 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG---GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp EEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC--------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc---chhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 3458899999999999984 3678899998854332 2234678999999999999999999999987744468
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
++||||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 176 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKN-KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTT-TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEeCCCCcHHHHHHhccc-cCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccccc
Confidence 999999999999999964432 599999999999999999999999 9999999999999999999999999998765
Q ss_pred hhcCCC-CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCc------cc
Q 006178 516 LARSEK-NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPE------VM 588 (658)
Q Consensus 516 ~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~------~~ 588 (658)
...... .......++..|+|||.+.+..++.++||||||+++|||+||..|+.... ..+......... ..
T Consensus 177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~~~~~~~~ 253 (302)
T 4e5w_A 177 ETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPM---ALFLKMIGPTHGQMTVTRLV 253 (302)
T ss_dssp CTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH---HHHHHHHCSCCGGGHHHHHH
T ss_pred cCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchh---hHHhhccCCcccccCHHHHH
Confidence 432211 11112233456999999999999999999999999999999999864211 000000000000 00
Q ss_pred ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
...........+...+..+.+++.+||+.||++|||+.|+++.|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 254 NTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 001111111233345577889999999999999999999999999875
No 89
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.1e-41 Score=379.26 Aligned_cols=251 Identities=18% Similarity=0.243 Sum_probs=198.3
Q ss_pred cccCCCCeeEEEEEec---CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 365 IIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 365 ~lG~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.||+|+||.||+|.+. ++..||||.+.... .....++|.+|++++++++|||||++++++.. + ..++||||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~--~~~lv~E~ 416 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E--ALMLVMEM 416 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCC---SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-S--SEEEEEEC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-C--CeEEEEEe
Confidence 7999999999999875 45578999875432 12345679999999999999999999999976 3 57999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++.+......
T Consensus 417 ~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 492 (613)
T 2ozo_A 417 AGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY 492 (613)
T ss_dssp CTTCBHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----
T ss_pred CCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce
Confidence 99999999997543 3699999999999999999999999 9999999999999999999999999999875432211
Q ss_pred -CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 522 -NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 522 -~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.....+..+..|+|||++.+..++.++|||||||++|||+| |+.||........ ....... .....
T Consensus 493 ~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~--~~~i~~~----------~~~~~ 560 (613)
T 2ozo_A 493 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV--MAFIEQG----------KRMEC 560 (613)
T ss_dssp ---------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHH--HHHHHTT----------CCCCC
T ss_pred eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH--HHHHHcC----------CCCCC
Confidence 11122333467999999999999999999999999999998 9999976543221 1111111 11122
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
+..++..+.+|+.+||+.||++||++.+|++.|+.+..
T Consensus 561 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 598 (613)
T 2ozo_A 561 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 598 (613)
T ss_dssp CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 33455778899999999999999999999999998653
No 90
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=4.3e-42 Score=379.50 Aligned_cols=254 Identities=17% Similarity=0.250 Sum_probs=203.8
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|++.++..||||++..... ..++|.+|++++++++||||+++++++.+ + ..++||||
T Consensus 271 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~--~~~lv~e~ 342 (535)
T 2h8h_A 271 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIYIVTEY 342 (535)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCEEEECC
T ss_pred hheecccCCCeEEEEEEECCCceEEEEEeCCCCC-----CHHHHHHHHHHHHhCCCCCEeeEEEEEee-c--cceEeeeh
Confidence 4589999999999999999888899998854321 24579999999999999999999999876 4 56999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.++++......+++.++..|+.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++.+......
T Consensus 343 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 419 (535)
T 2h8h_A 343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 419 (535)
T ss_dssp CTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHH
T ss_pred hcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCcee
Confidence 9999999999754334589999999999999999999999 9999999999999999999999999999865321100
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
.......+..|+|||.+....++.++|||||||++|||+| |+.||...... +........ . ....+
T Consensus 420 -~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~--~~~~~i~~~-~---------~~~~~ 486 (535)
T 2h8h_A 420 -ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVLDQVERG-Y---------RMPCP 486 (535)
T ss_dssp -TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH--HHHHHHHTT-C---------CCCCC
T ss_pred -cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC-C---------CCCCC
Confidence 1111223456999999999999999999999999999999 99999654321 111111111 0 01122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
..++..+.+|+.+||+.||++|||+.+|++.|+.+....
T Consensus 487 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 487 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 334567889999999999999999999999999987643
No 91
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.5e-41 Score=357.67 Aligned_cols=243 Identities=19% Similarity=0.167 Sum_probs=190.7
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.++||+|+||.||+|+... ++.+|+|++...... .....+.+.+|..++.++ +||||+++++++.+.+ ..++||
T Consensus 56 ~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~-~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--~~~lV~ 132 (396)
T 4dc2_A 56 LLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVN-DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFFVI 132 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC-----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhcc-CHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC--EEEEEE
Confidence 34899999999999999874 667888887543322 222334678999999888 8999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+......
T Consensus 133 E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~ 207 (396)
T 4dc2_A 133 EYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 207 (396)
T ss_dssp ECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred EcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccCC
Confidence 9999999999997654 499999999999999999999999 99999999999999999999999999987532221
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC-------cHHHHHHHhhcCCccccccc
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-------NLVDWAKDYLELPEVMSYVV 592 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 592 (658)
. ......++..|+|||++.+..++.++|||||||++|||++|+.||..... .............
T Consensus 208 ~--~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~------- 278 (396)
T 4dc2_A 208 D--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ------- 278 (396)
T ss_dssp C--CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC-------
T ss_pred C--ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc-------
Confidence 1 12223456789999999999999999999999999999999999964321 1111111111111
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSM 625 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~ 625 (658)
..++...+..+.+|+.+||+.||++||++
T Consensus 279 ----~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 279 ----IRIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ----cCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 11233344678899999999999999995
No 92
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.1e-41 Score=380.17 Aligned_cols=251 Identities=22% Similarity=0.296 Sum_probs=198.5
Q ss_pred ccccCCCCeeEEEEEec---CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 364 NIIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.||+|+||.||+|.+. .++.||||++.... ......+++.+|++++++++|||||++++++... ..++|||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~---~~~lv~E 449 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA--NDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVME 449 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG--GCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS---SEEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CEEEEEE
Confidence 57999999999999764 45689999875432 2233456899999999999999999999999754 4689999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++.... .+++..+..|+.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++.+.....
T Consensus 450 ~~~~g~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~ 524 (635)
T 4fl3_A 450 MAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524 (635)
T ss_dssp CCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---
T ss_pred ccCCCCHHHHHhhCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcc
Confidence 999999999997654 489999999999999999999999 999999999999999999999999999987653322
Q ss_pred C-CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 521 K-NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 521 ~-~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
. .....+.++..|+|||++.+..++.++|||||||++|||+| |+.||........ ....... ....
T Consensus 525 ~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~--~~~i~~~----------~~~~ 592 (635)
T 4fl3_A 525 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV--TAMLEKG----------ERMG 592 (635)
T ss_dssp ----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--HHHHHTT----------CCCC
T ss_pred ccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHHHcC----------CCCC
Confidence 1 12222334567999999999999999999999999999999 9999976543211 1111111 1112
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRI 636 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~ 636 (658)
.+..++..+.+++.+||+.||++||++.+|++.|+++.
T Consensus 593 ~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 593 CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 23344577889999999999999999999999998764
No 93
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=6.1e-41 Score=353.43 Aligned_cols=247 Identities=13% Similarity=0.126 Sum_probs=196.1
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.||+|.+..... ......+.+.+|++++++++|||||++++++.+.+ ..++|||
T Consensus 19 i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~-~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~--~~~lv~e 95 (384)
T 4fr4_A 19 ILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKC-VERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE--DMFMVVD 95 (384)
T ss_dssp EEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhc-ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEEEe
Confidence 4589999999999999986 467788888754321 12233467889999999999999999999999887 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+...
T Consensus 96 ~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-- 168 (384)
T 4fr4_A 96 LLLGGDLRYHLQQNV--HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-- 168 (384)
T ss_dssp CCTTEEHHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT--
T ss_pred cCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC--
Confidence 999999999998654 499999999999999999999999 9999999999999999999999999999865322
Q ss_pred CCCCcccccCccccCCccccc---CCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCCcccccccCCcC
Q 006178 521 KNPGTLGSQGAICILPSSLEA---RHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~---~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
.......++..|+|||++.. ..++.++|||||||++|||+||+.||..... .............
T Consensus 169 -~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~----------- 236 (384)
T 4fr4_A 169 -TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTV----------- 236 (384)
T ss_dssp -CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCC-----------
T ss_pred -CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcc-----------
Confidence 11222345677999999874 4589999999999999999999999975432 2222222221111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPS-MQELCT 630 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs-~~evl~ 630 (658)
..++...+..+.+|+.+||+.||++||+ ++++.+
T Consensus 237 ~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 237 VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 1122334467889999999999999998 666654
No 94
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.2e-41 Score=343.75 Aligned_cols=251 Identities=16% Similarity=0.163 Sum_probs=189.8
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccc----------------------hhhHHHHHHHHHHHHhccC
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWT----------------------GYLELYFQREVADLARINH 417 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~----------------------~~~~~~~~~E~~~l~~l~H 417 (658)
.+.+.||+|+||.||+|++. +++.||+|.+........ ....+.+.+|++++++++|
T Consensus 16 ~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 95 (298)
T 2zv2_A 16 TLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDH 95 (298)
T ss_dssp EEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCC
T ss_pred EEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCC
Confidence 34589999999999999976 577899998865431110 1123468899999999999
Q ss_pred CCccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCccee
Q 006178 418 ENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVY 497 (658)
Q Consensus 418 ~nIv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NIL 497 (658)
|||+++++++.+......++||||+++|+|.+++... .+++.++..++.||++||+|||++ +|+||||||+|||
T Consensus 96 ~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil 169 (298)
T 2zv2_A 96 PNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK---PLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLL 169 (298)
T ss_dssp TTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred CCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEE
Confidence 9999999999875444789999999999999876532 599999999999999999999999 9999999999999
Q ss_pred ecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCC---CCccccchhhHHHHHHHHhCCCCCCCCCCcH
Q 006178 498 LTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARH---LDVQGNIYAFGVLLLEIISGRPPCCKDKGNL 574 (658)
Q Consensus 498 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~---~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~ 574 (658)
++.++.+||+|||+++........ .....++..|+|||.+.+.. ++.++|||||||++|||++|+.||.....
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-- 245 (298)
T 2zv2_A 170 VGEDGHIKIADFGVSNEFKGSDAL--LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI-- 245 (298)
T ss_dssp ECTTSCEEECCCTTCEECSSSSCE--ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH--
T ss_pred ECCCCCEEEecCCCcccccccccc--ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH--
Confidence 999999999999998765432211 11223567799999998755 47899999999999999999999965432
Q ss_pred HHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 575 VDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
..+.......... .+.. ...+..+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~-----~~~~----~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 246 MCLHSKIKSQALE-----FPDQ----PDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHHHHHCCCC-----CCSS----SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHHhcccCC-----CCCc----cccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 2222111111000 0111 122356889999999999999999999875
No 95
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2e-41 Score=352.07 Aligned_cols=256 Identities=11% Similarity=0.120 Sum_probs=199.8
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.||+|+||.||+|+.. +++.||+|.+..... .+.+.+|+++++++ +||||+++++++.+.+ ..++||
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~--~~~lv~ 84 (330)
T 2izr_A 13 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR------APQLHLEYRFYKQLGSGDGIPQVYYFGPCGK--YNAMVL 84 (330)
T ss_dssp EEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS------SCCHHHHHHHHHHHCSCTTSCCEEEEEEETT--EEEEEE
T ss_pred EEEEeeccCCceEEEEEECCCCcEEEEEEeccccc------hHHHHHHHHHHHHhhCCCCCCEEEEEEecCC--ccEEEE
Confidence 3489999999999999974 678899998754322 13478999999999 9999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC-----ceeccccchhh
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS-----PKLVDFDSWKT 514 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~-----~kl~DFGla~~ 514 (658)
||+ +++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|||+++.
T Consensus 85 e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~ 159 (330)
T 2izr_A 85 ELL-GPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159 (330)
T ss_dssp ECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred EeC-CCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence 999 899999998643 3699999999999999999999999 9999999999999998887 99999999987
Q ss_pred hhhcCCCC-----CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCCccc
Q 006178 515 ILARSEKN-----PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELPEVM 588 (658)
Q Consensus 515 ~~~~~~~~-----~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~ 588 (658)
+....... ......++..|+|||.+.+..++.++|||||||++|||+||+.||..... ...+............
T Consensus 160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~ 239 (330)
T 2izr_A 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT 239 (330)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS
T ss_pred eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC
Confidence 54322211 11233456789999999999999999999999999999999999976432 2222222111100000
Q ss_pred ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
. .... ....+ ++.+++.+||+.||.+||++.+|.+.|+++..
T Consensus 240 ~---~~~~---~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~ 281 (330)
T 2izr_A 240 P---IEVL---CENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFD 281 (330)
T ss_dssp C---HHHH---TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred C---HHHH---hccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence 0 0000 00122 78899999999999999999999999987754
No 96
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.1e-40 Score=340.24 Aligned_cols=259 Identities=13% Similarity=0.122 Sum_probs=195.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||+||+|++. +++.||+|++..... .....+.+.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 81 (292)
T 3o0g_A 6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DEGVPSSALREICLLKELKHKNIVRLHDVLHSDK--KLTLVFE 81 (292)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS--STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred eeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC--cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCC--EEEEEEe
Confidence 3478999999999999986 578899998864432 2334467889999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++ ++.+.+.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~-~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR 156 (292)
T ss_dssp CCSE-EHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS
T ss_pred cCCC-CHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCccc
Confidence 9975 6666665433 2599999999999999999999999 999999999999999999999999999976532222
Q ss_pred CCCCcccccCccccCCcccccCC-CCccccchhhHHHHHHHHhCCCCCCCCCCcHHHH--HHHhhcCC--ccccccc---
Q 006178 521 KNPGTLGSQGAICILPSSLEARH-LDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDW--AKDYLELP--EVMSYVV--- 592 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~-~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~--~~~~~~~~--~~~~~~~--- 592 (658)
. .....++..|+|||.+.+.. ++.++|||||||++|||+||..||.......... +......+ .......
T Consensus 157 ~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 157 C--YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp C--CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred c--ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccc
Confidence 1 22233466799999998765 8999999999999999999988864433221111 11111110 0000000
Q ss_pred ----------CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 593 ----------DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 593 ----------~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...........+..+.+++.+||+.||++|||++|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 001111223345678899999999999999999999863
No 97
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=6.3e-41 Score=350.66 Aligned_cols=246 Identities=17% Similarity=0.212 Sum_probs=184.3
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.||+|.+.... ..+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 57 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e 128 (349)
T 2w4o_A 57 VESELGRGATSIVYRCKQKGTQKPYALKVLKKTV------DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT--EISLVLE 128 (349)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------------CHHHHHCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred EeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch------hHHHHHHHHHHHHhCCCCCCcceeeeEecCC--eEEEEEE
Confidence 3488999999999999987 46789999875332 2346889999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC---CCCceeccccchhhhhh
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKLVDFDSWKTILA 517 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~~~~ 517 (658)
|+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+|||++. ++.+||+|||+++....
T Consensus 129 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 129 LVTGGELFDRIVEKG--YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp CCCSCBHHHHHTTCS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred eCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 999999999997554 489999999999999999999999 9999999999999975 88999999999886532
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
.. ......++..|+|||.+.+..++.++|||||||++|||+||+.||.........+ ........ ....+
T Consensus 204 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-~~i~~~~~---~~~~~--- 273 (349)
T 2w4o_A 204 QV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMF-RRILNCEY---YFISP--- 273 (349)
T ss_dssp ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHH-HHHHTTCC---CCCTT---
T ss_pred cc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHH-HHHHhCCC---ccCCc---
Confidence 21 1122335677999999999999999999999999999999999997654432211 11111110 01111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.....+..+.+++.+||+.||++|||+.|+++.
T Consensus 274 -~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 274 -WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp -TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -hhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 112234568899999999999999999999874
No 98
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.9e-41 Score=350.88 Aligned_cols=250 Identities=16% Similarity=0.217 Sum_probs=193.5
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC--------
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP-------- 432 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-------- 432 (658)
+.+.||+|+||.||+|++. +++.||+|++.... .....+.+.+|++++++++||||+++++++.+...
T Consensus 10 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 86 (332)
T 3qd2_B 10 PIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMD 86 (332)
T ss_dssp EEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS---TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHH
T ss_pred eeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC---chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhh
Confidence 3489999999999999987 78899999986433 22345679999999999999999999999865432
Q ss_pred -----------------------------------------------CceEEEEEecCCCChhhhhccCCC-CCCCHHHH
Q 006178 433 -----------------------------------------------FTRMLVFDYASNGTLYEHLHYGER-CQVSWTRR 464 (658)
Q Consensus 433 -----------------------------------------------~~~~lv~E~~~~gsL~~~l~~~~~-~~l~~~~~ 464 (658)
...++||||+++|+|.+++..... ...++..+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~ 166 (332)
T 3qd2_B 87 EIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVC 166 (332)
T ss_dssp C--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHH
T ss_pred hhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHH
Confidence 137999999999999999986542 34677789
Q ss_pred HHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC----------CCCcccccCcccc
Q 006178 465 MKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK----------NPGTLGSQGAICI 534 (658)
Q Consensus 465 ~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~----------~~~~~~~~~~~~~ 534 (658)
+.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++........ .......++..|+
T Consensus 167 ~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~ 243 (332)
T 3qd2_B 167 LHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYM 243 (332)
T ss_dssp HHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGS
T ss_pred HHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCcc
Confidence 99999999999999999 9999999999999999999999999999876433211 1112234567799
Q ss_pred CCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHc
Q 006178 535 LPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLC 614 (658)
Q Consensus 535 aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 614 (658)
|||.+.+..++.++|||||||++|||++|..|+.. ........ ...............+.+++.+|
T Consensus 244 aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~----~~~~~~~~----------~~~~~~~~~~~~~~~~~~li~~~ 309 (332)
T 3qd2_B 244 SPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME----RVRIITDV----------RNLKFPLLFTQKYPQEHMMVQDM 309 (332)
T ss_dssp CHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----HHHHHHHH----------HTTCCCHHHHHHCHHHHHHHHHH
T ss_pred ChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH----HHHHHHHh----------hccCCCcccccCChhHHHHHHHH
Confidence 99999999999999999999999999999877421 11111111 11111111233446678999999
Q ss_pred cCCCCCCCCCHHHHHHH
Q 006178 615 VNPDITKRPSMQELCTM 631 (658)
Q Consensus 615 l~~dP~~RPs~~evl~~ 631 (658)
|+.||++|||+.|+++.
T Consensus 310 l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 310 LSPSPTERPEATDIIEN 326 (332)
T ss_dssp HCSSGGGSCCHHHHHHS
T ss_pred ccCCCCcCCCHHHHhhc
Confidence 99999999999999863
No 99
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2e-41 Score=352.51 Aligned_cols=256 Identities=22% Similarity=0.319 Sum_probs=201.5
Q ss_pred hhcccccCCCCeeEEEEEecC-C-----CeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCC
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG-G-----PEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPF 433 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~-~-----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~ 433 (658)
.+.+.||+|+||.||+|.+.. + ..||+|.+.... .....+.+.+|+.+++++ +||||+++++++.+.+
T Consensus 49 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-- 123 (333)
T 2i1m_A 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA---HADEKEALMSELKIMSHLGQHENIVNLLGACTHGG-- 123 (333)
T ss_dssp EEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred eeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc---ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC--
Confidence 345899999999999999753 2 368888874322 223456789999999999 8999999999998877
Q ss_pred ceEEEEEecCCCChhhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC
Q 006178 434 TRMLVFDYASNGTLYEHLHYGE------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED 501 (658)
Q Consensus 434 ~~~lv~E~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~ 501 (658)
..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCC
Confidence 6799999999999999987431 23589999999999999999999999 99999999999999999
Q ss_pred CCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHH--HHH
Q 006178 502 FSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLV--DWA 578 (658)
Q Consensus 502 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~--~~~ 578 (658)
+.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||+| |..||........ ...
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~ 280 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV 280 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHH
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHH
Confidence 9999999999986643322111112223456999999999999999999999999999999 9999975443221 111
Q ss_pred HHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 579 KDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
...... ..+...+..+.+++.+||+.||.+|||+.|+++.|+++..
T Consensus 281 ~~~~~~-------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 281 KDGYQM-------------AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp HHTCCC-------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcCCCC-------------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 111100 1112224568899999999999999999999999998764
No 100
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=7.1e-41 Score=355.47 Aligned_cols=250 Identities=16% Similarity=0.205 Sum_probs=192.9
Q ss_pred hhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc--CCCccceeeEEecCCCCceEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN--HENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~~~lv 438 (658)
.+.+.||+|+||.||+|...+++.||||++..... .....+.+.+|++++++++ ||||+++++++...+ ..++|
T Consensus 59 ~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv 134 (390)
T 2zmd_A 59 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMV 134 (390)
T ss_dssp EEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc--cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC--EEEEE
Confidence 34589999999999999998889999998865432 2344567999999999996 599999999999877 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|| +.+++|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||++ ++.+||+|||+++.+...
T Consensus 135 ~E-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~ 207 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 207 (390)
T ss_dssp EE-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC---
T ss_pred Ee-cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCC
Confidence 99 45789999998654 589999999999999999999999 999999999999995 578999999999876433
Q ss_pred CCCCCCcccccCccccCCccccc-----------CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcc
Q 006178 519 SEKNPGTLGSQGAICILPSSLEA-----------RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEV 587 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~-----------~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 587 (658)
..........++..|+|||++.+ ..++.++|||||||++|||++|+.||......... ..........
T Consensus 208 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~-~~~~~~~~~~ 286 (390)
T 2zmd_A 208 TTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK-LHAIIDPNHE 286 (390)
T ss_dssp ------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH-HHHHHCTTSC
T ss_pred CccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHH-HHHHhCcccc
Confidence 22222223345678999999865 46899999999999999999999999754332222 1221111100
Q ss_pred cccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 588 MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. .++...+..+.+|+.+||+.||++|||+.|+++.
T Consensus 287 ------~---~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 287 ------I---EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp ------C---CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ------C---CCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 0 1111123568899999999999999999999865
No 101
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=9.2e-42 Score=365.68 Aligned_cols=265 Identities=14% Similarity=0.149 Sum_probs=201.7
Q ss_pred cHHHHHHHHhhhc--ccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEE
Q 006178 351 SRQELEVACEDFS--NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYC 427 (658)
Q Consensus 351 ~~~~l~~~~~~f~--~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~ 427 (658)
.+.++...+++|. ++||+|+||+||+|++.+ ++.+|+|++...... .....+.+.+|+.++..++||||+++++++
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 143 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML-KRAETACFREERDVLVNGDSKWITTLHYAF 143 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH-HTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhh-hHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 3445555556665 899999999999999875 667888887542211 112233488999999999999999999999
Q ss_pred ecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceec
Q 006178 428 RESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLV 507 (658)
Q Consensus 428 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~ 507 (658)
.+.+ ..++||||+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 144 ~~~~--~~~lV~Ey~~gg~L~~~l~~~~-~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~ 217 (437)
T 4aw2_A 144 QDDN--NLYLVMDYYVGGDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLA 217 (437)
T ss_dssp ECSS--EEEEEECCCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred eeCC--EEEEEEecCCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEc
Confidence 9887 7899999999999999998633 2599999999999999999999999 99999999999999999999999
Q ss_pred cccchhhhhhcCCCCCCcccccCccccCCcccc-----cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhh
Q 006178 508 DFDSWKTILARSEKNPGTLGSQGAICILPSSLE-----ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYL 582 (658)
Q Consensus 508 DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~ 582 (658)
|||+|+........ ......+++.|+|||++. ...++.++|||||||++|||+||+.||...... +......
T Consensus 218 DFGla~~~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~--~~~~~i~ 294 (437)
T 4aw2_A 218 DFGSCLKLMEDGTV-QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV--ETYGKIM 294 (437)
T ss_dssp CCTTCEECCTTSCE-ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHH
T ss_pred chhhhhhcccCCCc-ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh--HHHHhhh
Confidence 99999765332211 112234567899999987 467999999999999999999999999754321 1111111
Q ss_pred cCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 006178 583 ELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITK--RPSMQELCTM 631 (658)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~--RPs~~evl~~ 631 (658)
.... .. .........+..+.+|+.+||+.+|++ ||+++|+++.
T Consensus 295 ~~~~---~~---~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 295 NHKE---RF---QFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp THHH---HC---CCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred hccc---cc---cCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 1000 00 000111123356889999999998888 9999999875
No 102
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=350.35 Aligned_cols=246 Identities=15% Similarity=0.202 Sum_probs=191.0
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
+.||+|+||.||+|+.. ++..||+|.+.... ....+.+.+|++++++++||||+++++++.+.+ ..++||||+
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~E~~ 168 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRG----MKDKEEVKNEISVMNQLDHANLIQLYDAFESKN--DIVLVMEYV 168 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEECC
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEcccc----cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEEEeCC
Confidence 67999999999999975 57889999875432 123567899999999999999999999999877 789999999
Q ss_pred CCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee--cCCCCceeccccchhhhhhcCC
Q 006178 443 SNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL--TEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl--~~~~~~kl~DFGla~~~~~~~~ 520 (658)
++|+|.+++.... ..+++..+..++.||++||+|||+. +|+||||||+|||+ ++++.+||+|||+++.+.....
T Consensus 169 ~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~ 244 (373)
T 2x4f_A 169 DGGELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK 244 (373)
T ss_dssp TTCEEHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB
T ss_pred CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc
Confidence 9999999987543 3589999999999999999999999 99999999999999 5678899999999986543221
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
.....++..|+|||.+.+..++.++|||||||++|||+||+.||...... ............. ......
T Consensus 245 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--~~~~~i~~~~~~~---~~~~~~--- 313 (373)
T 2x4f_A 245 ---LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA--ETLNNILACRWDL---EDEEFQ--- 313 (373)
T ss_dssp ---CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHHTCCCS---CSGGGT---
T ss_pred ---cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhccCCC---Chhhhc---
Confidence 12223567799999999889999999999999999999999999754321 1222221111000 011111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+..+.+|+.+||+.||++|||+.|+++.
T Consensus 314 -~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 314 -DISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp -TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -cCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 223568899999999999999999999873
No 103
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.3e-41 Score=351.04 Aligned_cols=259 Identities=19% Similarity=0.231 Sum_probs=201.8
Q ss_pred hcccccCCCCeeEEEEEe------cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCc
Q 006178 362 FSNIIGSSPDSLVYKGTM------KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFT 434 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~------~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 434 (658)
+.+.||+|+||.||+|++ .+++.||+|.+.... .....+.+.+|+.++.++ +||||+++++++...+. .
T Consensus 31 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~-~ 106 (316)
T 2xir_A 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-P 106 (316)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS-C
T ss_pred eeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC---CcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC-c
Confidence 348999999999999985 245788888874322 223446789999999999 79999999999877542 4
Q ss_pred eEEEEEecCCCChhhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC
Q 006178 435 RMLVFDYASNGTLYEHLHYGER--------------CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE 500 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~ 500 (658)
.++||||+++|+|.+++..... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.
T Consensus 107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~ 183 (316)
T 2xir_A 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSE 183 (316)
T ss_dssp CEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECG
T ss_pred eEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECC
Confidence 7999999999999999986542 1289999999999999999999999 9999999999999999
Q ss_pred CCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHH
Q 006178 501 DFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAK 579 (658)
Q Consensus 501 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~ 579 (658)
++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||+| |+.||.......... .
T Consensus 184 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~-~ 262 (316)
T 2xir_A 184 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC-R 262 (316)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHH-H
T ss_pred CCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHH-H
Confidence 99999999999976543222111112223456999999999999999999999999999999 999997544322111 1
Q ss_pred HhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 580 DYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
..... .. ...+...+..+.+++.+||+.||.+|||+.|+++.|+.+.+.
T Consensus 263 ~~~~~-~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 263 RLKEG-TR---------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp HHHHT-CC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhccC-cc---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 11111 00 011122345688999999999999999999999999988753
No 104
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=5.5e-41 Score=348.05 Aligned_cols=249 Identities=14% Similarity=0.143 Sum_probs=188.3
Q ss_pred hhcccccCCCCeeEEEEEe----cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 361 DFSNIIGSSPDSLVYKGTM----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
.+.+.||+|+||.||+|+. .+++.+|+|.+..............+.+|++++++++||||+++++++.+.+ ..+
T Consensus 20 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~ 97 (327)
T 3a62_A 20 ELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG--KLY 97 (327)
T ss_dssp EEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS--CEE
T ss_pred EEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC--EEE
Confidence 3458999999999999997 4688999998865432222233456889999999999999999999999877 789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 98 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 98 LILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp EEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred EEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 9999999999999997544 489999999999999999999999 99999999999999999999999999987643
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
...... ....++..|+|||.+.+..++.++|||||||++|||++|+.||..... ............
T Consensus 173 ~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~~~~~---------- 238 (327)
T 3a62_A 173 HDGTVT--HTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR--KKTIDKILKCKL---------- 238 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHTCC----------
T ss_pred cCCccc--cccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhCCC----------
Confidence 222111 122346679999999999999999999999999999999999975432 122222211110
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRP-----SMQELCTM 631 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 631 (658)
.++...+..+.+++.+||+.||++|| ++.|+++.
T Consensus 239 -~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 239 -NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp -CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred -CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 11223346688999999999999999 77787764
No 105
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=5.7e-42 Score=355.70 Aligned_cols=272 Identities=18% Similarity=0.237 Sum_probs=203.2
Q ss_pred hhcccccCCCCeeEEEEEe-----cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 361 DFSNIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
.+.+.||+|+||.||+|++ .++..||+|++... .....+.+.+|++++++++||||+++++++...+....
T Consensus 26 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 26 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS----GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp EEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC----CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 3458999999999999984 35778999987433 22345678999999999999999999999875544478
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
++||||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRA-RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGG-GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEEEeecCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceec
Confidence 999999999999999975332 599999999999999999999999 9999999999999999999999999998865
Q ss_pred hhcCCC-CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcC---Ccccccc
Q 006178 516 LARSEK-NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLEL---PEVMSYV 591 (658)
Q Consensus 516 ~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~---~~~~~~~ 591 (658)
...... .......++..|+|||.+.+..++.++||||||+++|||+||+.||................. .......
T Consensus 178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (327)
T 3lxl_A 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL 257 (327)
T ss_dssp CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH
T ss_pred ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh
Confidence 422211 112223345569999999999999999999999999999999999853221110000000000 0000001
Q ss_pred cCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCc
Q 006178 592 VDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640 (658)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 640 (658)
........+...+..+.+++.+||+.||++|||+.|+++.|+.+.....
T Consensus 258 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 258 EEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred hcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 1111112234455778899999999999999999999999999876544
No 106
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.1e-41 Score=343.07 Aligned_cols=256 Identities=20% Similarity=0.267 Sum_probs=199.0
Q ss_pred cccccCCCCeeEEEEEecCC-C---eEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 363 SNIIGSSPDSLVYKGTMKGG-P---EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~~-~---~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
.+.||+|+||.||+|++.++ . .+|+|.+... ......+.+.+|+.++++++||||+++++++.+.+. ..++|
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~v 101 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI---TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG-LPHVL 101 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC---CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CCEEE
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeecccc---ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCC-CcEEE
Confidence 37899999999999996432 2 5788876422 223345678999999999999999999999986652 34899
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||+.+|+|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.+...
T Consensus 102 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp ECCCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred EecccCCCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 99999999999997643 3689999999999999999999999 9999999999999999999999999999865432
Q ss_pred CC--CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCC-CCCCC-cHHHHHHHhhcCCcccccccCC
Q 006178 519 SE--KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPC-CKDKG-NLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 519 ~~--~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
.. ........++..|+|||.+.+..++.++||||||+++|||+||..|+ ..... ..........
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~------------ 245 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR------------ 245 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTC------------
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCC------------
Confidence 21 11222233456799999999999999999999999999999965554 33222 1221111110
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
....+...+..+.+++.+||+.||.+|||+.|+++.|+++....
T Consensus 246 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l 289 (298)
T 3pls_A 246 -RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289 (298)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence 01112223466889999999999999999999999999987643
No 107
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-40 Score=350.35 Aligned_cols=249 Identities=14% Similarity=0.183 Sum_probs=196.4
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|+.. +++.+|+|.+.... ......+.+|++++++++||||+++++++.+.. ..++||
T Consensus 54 ~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~lv~ 127 (387)
T 1kob_A 54 DILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY----PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY--EMVLIL 127 (387)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc----hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCC--EEEEEE
Confidence 34589999999999999986 56778887774332 123457889999999999999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC--CCCceeccccchhhhhh
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE--DFSPKLVDFDSWKTILA 517 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~--~~~~kl~DFGla~~~~~ 517 (658)
||+++|+|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+|||++. ++.+||+|||+++.+..
T Consensus 128 E~~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 128 EFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp ECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred EcCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 9999999999997543 2589999999999999999999999 9999999999999974 46799999999876532
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
. .......++..|+|||++.+..++.++|||||||++|||+||+.||..... ............. .++.
T Consensus 204 ~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--~~~~~~i~~~~~~----~~~~-- 272 (387)
T 1kob_A 204 D---EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD--LETLQNVKRCDWE----FDED-- 272 (387)
T ss_dssp T---SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHHCCCC----CCSS--
T ss_pred C---cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH--HHHHHHHHhCCCC----CCcc--
Confidence 2 112223456779999999999999999999999999999999999975432 1111111111000 0110
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.....+..+.+++.+||+.||++|||+.|+++.
T Consensus 273 -~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 273 -AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp -TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred -ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 111234568899999999999999999999875
No 108
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.4e-41 Score=346.22 Aligned_cols=252 Identities=16% Similarity=0.251 Sum_probs=193.5
Q ss_pred hhcccccCCCCeeEEEEEecCC--------CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGG--------PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP 432 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~--------~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 432 (658)
.+.+.||+|+||.||+|++... ..||+|.+.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 85 (289)
T 4fvq_A 11 IFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH----RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD- 85 (289)
T ss_dssp EEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG----GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT-
T ss_pred eeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC-
Confidence 3458999999999999997642 358888774322 234567999999999999999999999998877
Q ss_pred CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC--------c
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS--------P 504 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~--------~ 504 (658)
..++||||+++|+|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++. +
T Consensus 86 -~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 160 (289)
T 4fvq_A 86 -ENILVQEFVKFGSLDTYLKKNKN-CINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFI 160 (289)
T ss_dssp -CCEEEEECCTTCBHHHHHHHTGG-GCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred -CCEEEEECCCCCCHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccccccccee
Confidence 66999999999999999986533 489999999999999999999999 9999999999999998887 9
Q ss_pred eeccccchhhhhhcCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhc
Q 006178 505 KLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLE 583 (658)
Q Consensus 505 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~ 583 (658)
||+|||++...... ....++..|+|||.+.+ ..++.++|||||||++|||+||..|+......... ... ..
T Consensus 161 kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~-~~~-~~ 232 (289)
T 4fvq_A 161 KLSDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK-LQF-YE 232 (289)
T ss_dssp EECCCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-HHH-HH
T ss_pred eeccCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHH-HHH-hh
Confidence 99999988654211 11223456999999987 67999999999999999999965544332221111 111 11
Q ss_pred CCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCch
Q 006178 584 LPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 641 (658)
........ .+..+.+++.+||+.||++|||+.|+++.|+++......
T Consensus 233 ~~~~~~~~-----------~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~ 279 (289)
T 4fvq_A 233 DRHQLPAP-----------KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV 279 (289)
T ss_dssp TTCCCCCC-----------SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-----
T ss_pred ccCCCCCC-----------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCC
Confidence 11111111 123467999999999999999999999999998875443
No 109
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.8e-41 Score=353.09 Aligned_cols=248 Identities=18% Similarity=0.159 Sum_probs=195.4
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~l 437 (658)
+.+.+.||+|+||.||+|++. +++.||+|++..... ......+.+.+|.++++.+ +||||+++++++.+.+ ..++
T Consensus 25 y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~-~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--~~~l 101 (353)
T 3txo_A 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVI-LQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD--RLFF 101 (353)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-HHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEE
T ss_pred eEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHh-cchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC--EEEE
Confidence 334589999999999999986 578899998854321 1223345688999999998 7999999999999887 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+....
T Consensus 102 v~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 999999999999997654 499999999999999999999999 999999999999999999999999999875322
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
... ......++..|+|||++.+..++.++|||||||++|||+||+.||..... ............
T Consensus 177 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~i~~~~~----------- 241 (353)
T 3txo_A 177 NGV--TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE--DDLFEAILNDEV----------- 241 (353)
T ss_dssp -----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCC-----------
T ss_pred CCc--cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH--HHHHHHHHcCCC-----------
Confidence 211 12223456779999999998999999999999999999999999975432 222222221111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCH------HHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSM------QELCT 630 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~------~evl~ 630 (658)
.++...+..+.+++.+||+.||++||++ .|+++
T Consensus 242 ~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 242 VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1222234568899999999999999998 66664
No 110
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-40 Score=339.30 Aligned_cols=266 Identities=19% Similarity=0.171 Sum_probs=198.4
Q ss_pred HhhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccc-cchhhHHHHHHHHHHHHhcc---CCCccceeeEEecCCCC
Q 006178 359 CEDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARIN---HENTGKLLGYCRESSPF 433 (658)
Q Consensus 359 ~~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~ 433 (658)
.+.+.+.||+|+||.||+|++. +++.||+|++...... ........+.+|++++++++ ||||+++++++......
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~ 89 (308)
T 3g33_A 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTD 89 (308)
T ss_dssp CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSS
T ss_pred ceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCC
Confidence 3444589999999999999974 6788999998654421 11222345678888887775 99999999999765421
Q ss_pred ---ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceecccc
Q 006178 434 ---TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFD 510 (658)
Q Consensus 434 ---~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 510 (658)
..++||||+. |+|.+++.......+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 90 ~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg 165 (308)
T 3g33_A 90 REIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFG 165 (308)
T ss_dssp SEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEECSCS
T ss_pred CceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEeeCc
Confidence 4689999996 5999999877665699999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcH-HHHHHHhhcCCc--c
Q 006178 511 SWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-VDWAKDYLELPE--V 587 (658)
Q Consensus 511 la~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-~~~~~~~~~~~~--~ 587 (658)
+++..... .......++..|+|||.+.+..++.++|||||||++|||+||+.||....... ...+......+. .
T Consensus 166 ~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 242 (308)
T 3g33_A 166 LARIYSYQ---MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 242 (308)
T ss_dssp CTTTSTTC---CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred cccccCCC---cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 99765322 12223345677999999999999999999999999999999999997644221 111111111100 0
Q ss_pred ccc-------ccCCcCC----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 588 MSY-------VVDPELK----HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 588 ~~~-------~~~~~~~----~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
... ...+... ...++.+..+.+++.+||+.||++|||+.|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 243 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp SCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 000 0000000 0011234678899999999999999999999863
No 111
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=4.6e-41 Score=348.87 Aligned_cols=260 Identities=19% Similarity=0.224 Sum_probs=200.5
Q ss_pred hhhcccccCCCCeeEEEEEec------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCC
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 433 (658)
+.+.+.||+|+||.||+|++. ++..||+|.+.... ......++.+|+.++++++||||+++++++.+.+
T Consensus 32 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 106 (327)
T 2yfx_A 32 ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL-- 106 (327)
T ss_dssp CEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred eEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc---chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC--
Confidence 334589999999999999843 46689999874321 2334567899999999999999999999998877
Q ss_pred ceEEEEEecCCCChhhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC---CCCce
Q 006178 434 TRMLVFDYASNGTLYEHLHYGER-----CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPK 505 (658)
Q Consensus 434 ~~~lv~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~k 505 (658)
..++||||+++|+|.+++..... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++. +..+|
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEE
Confidence 67999999999999999985432 3589999999999999999999999 9999999999999994 44699
Q ss_pred eccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcC
Q 006178 506 LVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLEL 584 (658)
Q Consensus 506 l~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 584 (658)
|+|||+++...............++..|+|||.+.+..++.++||||||+++|||+| |+.||...... .........
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~ 261 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSG 261 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHTT
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--HHHHHHhcC
Confidence 999999987654333223333344567999999999999999999999999999999 99999654321 111111111
Q ss_pred CcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 585 PEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
. ....+...+..+.+++.+||+.||.+|||+.|+++.|+.+....
T Consensus 262 -~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 262 -G---------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp -C---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred -C---------CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 0 01112233466889999999999999999999999999887643
No 112
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.5e-41 Score=351.08 Aligned_cols=268 Identities=18% Similarity=0.233 Sum_probs=203.5
Q ss_pred hcccccCCCCeeEEEEEec-----CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-----GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-----~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.||+|+||.||++.+. +++.||+|++.... .....+.+.+|++++++++||||+++++++.+.+....+
T Consensus 35 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 35 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA---GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp EEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred hhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc---ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 3488999999999998753 57789999885332 233456799999999999999999999999876544789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++|+|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 112 lv~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp EEECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred EEEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 999999999999999754 389999999999999999999999 99999999999999999999999999988754
Q ss_pred hcCCC-CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHH---hhcCCccccccc
Q 006178 517 ARSEK-NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKD---YLELPEVMSYVV 592 (658)
Q Consensus 517 ~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~ 592 (658)
..... .......++..|+|||.+.+..++.++||||||+++|||+||+.||............. ............
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 32211 11122334556999999999999999999999999999999999986422111100000 000000000001
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
.......+...+..+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 266 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 311 (318)
T 3lxp_A 266 RGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 311 (318)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHh
Confidence 1111123334456789999999999999999999999999987654
No 113
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=3.3e-41 Score=342.10 Aligned_cols=253 Identities=17% Similarity=0.208 Sum_probs=197.3
Q ss_pred hcccccCCCCeeEEEEEecCC----CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGG----PEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~----~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
+.+.||+|+||.||+|++.+. ..||+|.+.... .....+.+.+|+.++++++||||+++++++.+. ..++
T Consensus 16 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~ 89 (281)
T 3cc6_A 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC---TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE---PTWI 89 (281)
T ss_dssp EEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS---CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS---SCEE
T ss_pred EEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc---CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC---CCEE
Confidence 348999999999999986532 248888764322 223456799999999999999999999998754 3589
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+++++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 90 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 999999999999997543 2589999999999999999999999 999999999999999999999999999886543
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCc-HHHHHHHhhcCCcccccccCCc
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGN-LVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
.... ......++..|+|||.+.+..++.++||||||+++|||+| |+.||...... ..........
T Consensus 166 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~------------ 232 (281)
T 3cc6_A 166 EDYY-KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDR------------ 232 (281)
T ss_dssp --------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCC------------
T ss_pred cccc-ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCC------------
Confidence 2211 1122233456999999999999999999999999999999 99999654322 2222111100
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
...+...++.+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 233 -~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 233 -LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 011222345688999999999999999999999999988653
No 114
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=5.9e-41 Score=350.67 Aligned_cols=267 Identities=12% Similarity=0.072 Sum_probs=194.5
Q ss_pred hhcccccCCCCeeEEEEEec----CCCeEEEEEEeeecccc-------chhhHHHHHHHHHHHHhccCCCccceeeEEec
Q 006178 361 DFSNIIGSSPDSLVYKGTMK----GGPEIAVISLCIKEEHW-------TGYLELYFQREVADLARINHENTGKLLGYCRE 429 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~----~~~~vavk~~~~~~~~~-------~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 429 (658)
.+.+.||+|+||.||+|++. .+..+|+|+........ .....+.+.+|+..++.++||||+++++++..
T Consensus 40 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~ 119 (345)
T 2v62_A 40 VLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLT 119 (345)
T ss_dssp EEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEE
T ss_pred EEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccccc
Confidence 34589999999999999986 56788998876443211 01122347788999999999999999999877
Q ss_pred C--CCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC--Cce
Q 006178 430 S--SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF--SPK 505 (658)
Q Consensus 430 ~--~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~--~~k 505 (658)
. +....++||||+ +++|.+++...+ .+++.+++.|+.||+.||+|||++ +|+||||||+|||++.++ .+|
T Consensus 120 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~k 193 (345)
T 2v62_A 120 EFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQVY 193 (345)
T ss_dssp ESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTSEE
T ss_pred ccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCcEE
Confidence 2 122789999999 999999998654 599999999999999999999999 999999999999999887 999
Q ss_pred eccccchhhhhhcCCCCC-----CcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHH--H
Q 006178 506 LVDFDSWKTILARSEKNP-----GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDW--A 578 (658)
Q Consensus 506 l~DFGla~~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~--~ 578 (658)
|+|||+++.+........ .....++..|+|||.+.+..++.++|||||||++|||+||+.||.......... .
T Consensus 194 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~ 273 (345)
T 2v62_A 194 LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTA 273 (345)
T ss_dssp ECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHH
T ss_pred EEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHH
Confidence 999999987643322111 122345677999999999999999999999999999999999996432222111 1
Q ss_pred HHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 579 KDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
..... ............ ....+..+.+++.+||+.||++|||+.+|++.|+++..
T Consensus 274 ~~~~~--~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 274 KTNLL--DELPQSVLKWAP--SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHH--HTTTHHHHHHSC--TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHhhc--ccccHHHHhhcc--ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 11110 001110000000 00233568899999999999999999999999998653
No 115
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.3e-41 Score=343.97 Aligned_cols=252 Identities=22% Similarity=0.296 Sum_probs=197.7
Q ss_pred cccCCCCeeEEEEEec---CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 365 IIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 365 ~lG~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.||+|+||.||+|.+. .++.||+|.+..... .....+++.+|++++++++||||+++++++.. + ..++||||
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~--~~~lv~e~ 98 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN--DPALKDELLAEANVMQQLDNPYIVRMIGICEA-E--SWMLVMEM 98 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-S--SEEEEEEC
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC-C--CcEEEEEe
Confidence 8999999999999653 357889988754322 23345679999999999999999999999943 3 57999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++........
T Consensus 99 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 173 (291)
T 1xbb_A 99 AELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 173 (291)
T ss_dssp CTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred CCCCCHHHHHHhCc--CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCc
Confidence 99999999998654 489999999999999999999999 9999999999999999999999999998765332211
Q ss_pred -CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 522 -NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 522 -~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.....+.++..|+|||.+.+..++.++||||||+++|||+| |+.||........ ....... . ....
T Consensus 174 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~--~~~~~~~-~---------~~~~ 241 (291)
T 1xbb_A 174 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV--TAMLEKG-E---------RMGC 241 (291)
T ss_dssp EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--HHHHHTT-C---------CCCC
T ss_pred ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH--HHHHHcC-C---------CCCC
Confidence 11122333467999999998889999999999999999999 9999975443211 1111111 0 1112
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
+...+..+.+++.+||+.||++||++.|+++.|+++...
T Consensus 242 ~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 242 PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 233456788999999999999999999999999988654
No 116
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-40 Score=342.20 Aligned_cols=244 Identities=15% Similarity=0.175 Sum_probs=197.5
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.+|+|.+...... .....+.+.+|+.+++.++||||+++++++.+.+ ..++|||
T Consensus 10 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~--~~~lv~e 86 (318)
T 1fot_A 10 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV-RLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ--QIFMIMD 86 (318)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC--EEEEEEe
Confidence 3489999999999999986 6788999988543211 1223456889999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 87 ~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~-- 159 (318)
T 1fot_A 87 YIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-- 159 (318)
T ss_dssp CCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC--
T ss_pred CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCc--
Confidence 999999999998654 489999999999999999999999 9999999999999999999999999999764321
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
.....++..|+|||.+.+..++.++|||||||++|||++|+.||..... ............ .++
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~-----------~~p 223 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT--MKTYEKILNAEL-----------RFP 223 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHHCCC-----------CCC
T ss_pred ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCCC-----------CCC
Confidence 1223356679999999999999999999999999999999999965432 222222221110 122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRP-----SMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 631 (658)
...+..+.+++.+||+.||++|| +++|+++.
T Consensus 224 ~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 224 PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 23346688999999999999999 88888853
No 117
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=6.1e-40 Score=339.48 Aligned_cols=253 Identities=20% Similarity=0.232 Sum_probs=200.1
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeecccc--chhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW--TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.+.||+|+||.||+|++. +++.+|+|.+....... .....+.+.+|+.++++++||||+++++++.+.+ ..+
T Consensus 14 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~ 91 (321)
T 2a2a_A 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT--DVV 91 (321)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEE
T ss_pred EEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--EEE
Confidence 445689999999999999986 57889999886544221 1223567999999999999999999999998877 789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC----Cceeccccch
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF----SPKLVDFDSW 512 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGla 512 (658)
+||||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||++++++ .+||+|||++
T Consensus 92 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEECCCCSCBHHHHHHTCS--CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 9999999999999997543 589999999999999999999999 999999999999999887 7999999998
Q ss_pred hhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccccccc
Q 006178 513 KTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVV 592 (658)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (658)
+....... .....++..|+|||.+.+..++.++||||||+++|||+||+.||..... ..................
T Consensus 167 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~ 241 (321)
T 2a2a_A 167 HEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLANITSVSYDFDEEF 241 (321)
T ss_dssp EECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHTTCCCCCHHH
T ss_pred eecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhcccccChhh
Confidence 76543211 1222356679999999999999999999999999999999999965432 122222111110000000
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
....+..+.+++.+||+.||++|||+.|+++.
T Consensus 242 -------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 242 -------FSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp -------HTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred -------hcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 01123568899999999999999999999874
No 118
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=8.2e-41 Score=346.32 Aligned_cols=242 Identities=18% Similarity=0.217 Sum_probs=177.9
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.||+|+||.||+|++. +++.||+|.+... ....+.+|+.+++++. ||||+++++++.+.. ..++||||
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~--~~~lv~e~ 87 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR-------MEANTQKEITALKLCEGHPNIVKLHEVFHDQL--HTFLVMEL 87 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG-------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEECC
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh-------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC--EEEEEEEc
Confidence 68999999999999986 5788999987432 2356789999999996 999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC---Cceeccccchhhhhhc
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF---SPKLVDFDSWKTILAR 518 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGla~~~~~~ 518 (658)
+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||+++.....
T Consensus 88 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 88 LNGGELFERIKKKK--HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp CCSCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 99999999998654 599999999999999999999999 999999999999998765 7999999998754322
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC-----cHHHHHHHhhcCCcccccccC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-----NLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 593 (658)
... .....++..|+|||.+.+..++.++|||||||++|||++|+.||..... ...+........
T Consensus 163 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~--------- 231 (325)
T 3kn6_A 163 NQP--LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG--------- 231 (325)
T ss_dssp -----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTT---------
T ss_pred CCc--ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcC---------
Confidence 211 1222346679999999999999999999999999999999999975432 112222221111
Q ss_pred CcCCCCC---HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 594 PELKHFS---YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 594 ~~~~~~~---~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...... ...+..+.+|+.+||+.||++|||+.|+++.
T Consensus 232 -~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 232 -DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp -CCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred -CCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 111011 1234678899999999999999999998754
No 119
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.5e-40 Score=349.33 Aligned_cols=247 Identities=19% Similarity=0.223 Sum_probs=189.1
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+++.. +++.||+|++..... ..+.+.+|+.++++++||||+++++++.+.+ ..++||
T Consensus 23 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~ 95 (361)
T 3uc3_A 23 DFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-----IDENVQREIINHRSLRHPNIVRFKEVILTPT--HLAIIM 95 (361)
T ss_dssp EEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-----SCHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-----ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCC--EEEEEE
Confidence 34589999999999999987 678899998854322 2346889999999999999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC--ceeccccchhhhhh
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS--PKLVDFDSWKTILA 517 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~--~kl~DFGla~~~~~ 517 (658)
||+++|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|||+++....
T Consensus 96 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 96 EYASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred EeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 9999999999997544 499999999999999999999999 9999999999999987765 99999999875322
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCcc-ccchhhHHHHHHHHhCCCCCCCCC--CcHHHHHHHhhcCCcccccccCC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQ-GNIYAFGVLLLEIISGRPPCCKDK--GNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~k-sDVwS~Gvvl~elltG~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
.. ......++..|+|||.+.+..++.+ +|||||||++|||++|+.||.... ..................
T Consensus 171 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~----- 242 (361)
T 3uc3_A 171 HS---QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIP----- 242 (361)
T ss_dssp -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCC-----
T ss_pred cC---CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCC-----
Confidence 11 1122335677999999988887655 899999999999999999997533 223333332222111110
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. ....+..+.+|+.+||+.||++|||+.|+++.
T Consensus 243 ~----~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 243 D----DIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp T----TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred C----cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 0 01123567899999999999999999999875
No 120
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=357.14 Aligned_cols=271 Identities=10% Similarity=0.114 Sum_probs=204.1
Q ss_pred hhcccccCCCCeeEEEEEecC---------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccc---------
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG---------GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGK--------- 422 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~---------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~--------- 422 (658)
.+.+.||+|+||.||+|++.. ++.||+|.+... +.+.+|++++++++||||++
T Consensus 45 ~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---------~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 45 KLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---------GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp EEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---------STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred EEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---------chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 345899999999999999874 788999987432 24789999999999999988
Q ss_pred ------eeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcce
Q 006178 423 ------LLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAV 496 (658)
Q Consensus 423 ------l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NI 496 (658)
+++++...+. ..++||||+ +++|.+++.......+++.++..++.||+.||+|||++ +|+||||||+||
T Consensus 116 ~~~i~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NI 190 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDK-YRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENI 190 (352)
T ss_dssp TCSCCCCCEEEEETTT-EEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGE
T ss_pred ccCccchhhccccCCc-EEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHE
Confidence 5667665222 789999999 99999999866445699999999999999999999999 999999999999
Q ss_pred eecCCC--CceeccccchhhhhhcCCCCC-----CcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCC
Q 006178 497 YLTEDF--SPKLVDFDSWKTILARSEKNP-----GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCK 569 (658)
Q Consensus 497 Ll~~~~--~~kl~DFGla~~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~ 569 (658)
+++.++ .+||+|||+++.+........ .....++..|+|||.+.+..++.++|||||||++|||+||+.||..
T Consensus 191 l~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 270 (352)
T 2jii_A 191 FVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTN 270 (352)
T ss_dssp EEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred EEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 999998 899999999987654322111 1222456779999999999999999999999999999999999975
Q ss_pred CCCcHH---HHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCchhhhcc
Q 006178 570 DKGNLV---DWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVELKA 646 (658)
Q Consensus 570 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~ 646 (658)
...... .......... ....+.... ....+..+.+++.+||+.||++|||+.|+++.|+++...... ...
T Consensus 271 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~--~~~ 343 (352)
T 2jii_A 271 CLPNTEDIMKQKQKFVDKP---GPFVGPCGH--WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV--SPY 343 (352)
T ss_dssp GTTCHHHHHHHHHHHHHSC---CCEECTTSC--EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC--CTT
T ss_pred CCcCHHHHHHHHHhccCCh---hhhhhhccc--cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC--CcC
Confidence 432221 1211111111 111111100 011235688999999999999999999999999998754322 123
Q ss_pred chhHHh
Q 006178 647 SSLAWA 652 (658)
Q Consensus 647 ~~~~~~ 652 (658)
.+.+|.
T Consensus 344 ~~~dw~ 349 (352)
T 2jii_A 344 DPIGLP 349 (352)
T ss_dssp SCCCCC
T ss_pred ccccCc
Confidence 455554
No 121
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=3.3e-40 Score=333.71 Aligned_cols=251 Identities=16% Similarity=0.191 Sum_probs=197.9
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|+.. +++.||+|.+..... ....+.+.+|+.++++++||||+++++++.+.+ ..++||
T Consensus 10 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 84 (276)
T 2yex_A 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLFL 84 (276)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC---TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred EEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc---hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCC--EEEEEE
Confidence 34589999999999999986 678899998754332 223467899999999999999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..+....
T Consensus 85 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 159 (276)
T 2yex_A 85 EYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (276)
T ss_dssp ECCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred EecCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCc
Confidence 9999999999997543 489999999999999999999999 99999999999999999999999999987654322
Q ss_pred CCCCCcccccCccccCCcccccCCC-CccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHL-DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
.........++..|+|||.+.+..+ +.++||||||+++|||+||+.||.........+.... ...... .
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~---------~ 229 (276)
T 2yex_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK-EKKTYL---------N 229 (276)
T ss_dssp EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHH-TTCTTS---------T
T ss_pred chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhh-hccccc---------C
Confidence 2111222334667999999987765 7899999999999999999999976543322221111 110000 0
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.....+..+.+++.+||+.||++|||+.|+++.
T Consensus 230 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 230 PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred chhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 011234567899999999999999999999763
No 122
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2.3e-41 Score=342.66 Aligned_cols=248 Identities=23% Similarity=0.299 Sum_probs=193.7
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|+.. ++.||+|.+.... ..+.+.+|++++++++||||+++++++.+.+. ..++||||
T Consensus 25 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~lv~e~ 96 (278)
T 1byg_A 25 LLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEY 96 (278)
T ss_dssp EEEEEEECSSCEEEEEEET-TEEEEEEECCCCC--------HHHHHTHHHHTTCCCTTBCCEEEEECCC---CCEEEECC
T ss_pred EEeEEecCCCceEEEEEEc-CCEEEEEEecchh------HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCC-ceEEEEec
Confidence 4589999999999999885 6789999874322 24578999999999999999999999765432 57999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.......+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 171 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 171 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccc--
Confidence 9999999999765443489999999999999999999999 99999999999999999999999999987643221
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
.....+..|+|||.+.+..++.++||||||+++|||+| |+.||........ ....... .....+
T Consensus 172 ---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~--~~~~~~~----------~~~~~~ 236 (278)
T 1byg_A 172 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--VPRVEKG----------YKMDAP 236 (278)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH--HHHHTTT----------CCCCCC
T ss_pred ---cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHHhcC----------CCCCCc
Confidence 12233566999999999999999999999999999999 9999975432211 1111110 011122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
...+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 237 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 237 DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 3345678899999999999999999999999998764
No 123
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=3e-40 Score=344.55 Aligned_cols=243 Identities=19% Similarity=0.160 Sum_probs=192.6
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.||+|+||.||+|++. +++.+|+|++..... ......+.+.+|..++.++ +||||+++++++.+.+ ..++||
T Consensus 13 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--~~~lv~ 89 (345)
T 3a8x_A 13 LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELV-NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFFVI 89 (345)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGS-CSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHh-cchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC--EEEEEE
Confidence 3489999999999999986 467888888754332 2233456788999999998 8999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 90 e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 90 EYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp CCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 9999999999997544 499999999999999999999999 99999999999999999999999999987532211
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC-------cHHHHHHHhhcCCccccccc
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-------NLVDWAKDYLELPEVMSYVV 592 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 592 (658)
. ......++..|+|||.+.+..++.++|||||||++|||++|+.||..... .............
T Consensus 165 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~------- 235 (345)
T 3a8x_A 165 D--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ------- 235 (345)
T ss_dssp C--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC-------
T ss_pred C--cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC-------
Confidence 1 12223456779999999999999999999999999999999999964221 1111111111110
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSM 625 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~ 625 (658)
..++...+..+.+++.+||+.||++||++
T Consensus 236 ----~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 236 ----IRIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred ----CCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 11223344678899999999999999995
No 124
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.8e-40 Score=346.77 Aligned_cols=243 Identities=17% Similarity=0.178 Sum_probs=197.3
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|++. +++.||+|.+...... .....+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e~ 122 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEY 122 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhc-cHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC--EEEEEEcC
Confidence 489999999999999986 5788999988543211 1223457889999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 123 ~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~-- 195 (350)
T 1rdq_E 123 VAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-- 195 (350)
T ss_dssp CTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB--
T ss_pred CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCCc--
Confidence 99999999998644 489999999999999999999999 99999999999999999999999999998653221
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
....++..|+|||.+.+..++.++|||||||++|||++|+.||..... ............ .++.
T Consensus 196 ---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~~~-----------~~p~ 259 (350)
T 1rdq_E 196 ---WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--IQIYEKIVSGKV-----------RFPS 259 (350)
T ss_dssp ---CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCC-----------CCCT
T ss_pred ---ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--HHHHHHHHcCCC-----------CCCC
Confidence 122356779999999999999999999999999999999999975432 222222221110 1222
Q ss_pred HHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPS-----MQELCTM 631 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs-----~~evl~~ 631 (658)
..+..+.+++.+||+.||++||+ ++||++.
T Consensus 260 ~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 260 HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 33466889999999999999998 7887753
No 125
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.3e-40 Score=340.28 Aligned_cols=271 Identities=14% Similarity=0.188 Sum_probs=204.4
Q ss_pred hhhcccccCCCCeeEEEEEe-cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||.||+|++ .+++.||+|.+...... +.+.+|++++++++|++++..++++...+. ..++|
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~~~lv 83 (296)
T 4hgt_A 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH------PQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVMV 83 (296)
T ss_dssp CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C------CCHHHHHHHHHHHTTSTTCCCEEEEEEETT-EEEEE
T ss_pred eEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc------hHHHHHHHHHHHhcCCCCCCeeeeecCCCC-ceEEE
Confidence 33458999999999999997 46788999876443322 247889999999998888888777654332 67999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee---cCCCCceeccccchhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~ 515 (658)
|||+ +++|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+|||+ ++++.+||+|||+++..
T Consensus 84 ~e~~-~~~L~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~ 158 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp EECC-CCBHHHHHHHTTS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred EEcc-CCCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence 9999 8999999975433 599999999999999999999999 99999999999999 78899999999999875
Q ss_pred hhcCCC-----CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC----c-HHHHHHHhhcCC
Q 006178 516 LARSEK-----NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG----N-LVDWAKDYLELP 585 (658)
Q Consensus 516 ~~~~~~-----~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~----~-~~~~~~~~~~~~ 585 (658)
...... .......++..|+|||.+.+..++.++|||||||++|||+||+.||..... . ...........+
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 238 (296)
T 4hgt_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 238 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch
Confidence 433221 112233456779999999999999999999999999999999999975321 1 111111111110
Q ss_pred cccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCchhhhccchhHHhhh
Q 006178 586 EVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVELKASSLAWAEL 654 (658)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~l 654 (658)
.... ....+..+.+++.+||+.||++|||+.|+++.|+++...... ....+.+|..+
T Consensus 239 ---~~~~-------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~--~~~~~~dw~~~ 295 (296)
T 4hgt_A 239 ---IEVL-------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF--SYDYVFDWNML 295 (296)
T ss_dssp ---HHHH-------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTC--CTTCCCGGGGC
T ss_pred ---hhhh-------hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCC--CccCccchhhc
Confidence 0000 011235688999999999999999999999999998753211 23346778765
No 126
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.5e-40 Score=344.09 Aligned_cols=258 Identities=16% Similarity=0.152 Sum_probs=193.8
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeec-cccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKE-EHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~-~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
+.+.+.||+|+||.||+|+.. ++..+|+|.+.... ........+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 28 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~l 105 (345)
T 3hko_A 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ--YICL 105 (345)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred eeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC--eEEE
Confidence 334589999999999999985 56788888875432 1112334567999999999999999999999998877 7899
Q ss_pred EEEecCCCChhhhhccCC--------------------------------------CCCCCHHHHHHHHHHHHHHHHHhh
Q 006178 438 VFDYASNGTLYEHLHYGE--------------------------------------RCQVSWTRRMKIVIGIARGLKYLH 479 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~--------------------------------------~~~l~~~~~~~i~~qia~gL~yLH 479 (658)
||||+++|+|.+++.... ...+++..+..++.||+.||+|||
T Consensus 106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 185 (345)
T 3hko_A 106 VMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH 185 (345)
T ss_dssp EEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999985210 112467788899999999999999
Q ss_pred hcCCCCeeeccCCCcceeecCCC--CceeccccchhhhhhcCCCC--CCcccccCccccCCccccc--CCCCccccchhh
Q 006178 480 TELGPPFTISELNSSAVYLTEDF--SPKLVDFDSWKTILARSEKN--PGTLGSQGAICILPSSLEA--RHLDVQGNIYAF 553 (658)
Q Consensus 480 ~~~~~~ivHrDlkp~NILl~~~~--~~kl~DFGla~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~--~~~~~ksDVwS~ 553 (658)
++ +|+||||||+||+++.++ .+||+|||+++.+....... ......++..|+|||.+.+ ..++.++|||||
T Consensus 186 ~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diwsl 262 (345)
T 3hko_A 186 NQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSA 262 (345)
T ss_dssp HT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHH
T ss_pred HC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHH
Confidence 99 999999999999998776 89999999998654322111 1223345677999999875 678999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 554 GVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 554 Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
||++|||+||+.||...... ............. ..+.. ...+..+.+++.+||+.||.+|||+.|+++.
T Consensus 263 G~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~---~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 263 GVLLHLLLMGAVPFPGVNDA--DTISQVLNKKLCF---ENPNY----NVLSPLARDLLSNLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp HHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCCT---TSGGG----GGSCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred HHHHHHHHHCCCCCCCCChH--HHHHHHHhccccc---CCccc----ccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 99999999999999654322 1112221111100 01111 1234568899999999999999999999874
No 127
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=353.01 Aligned_cols=269 Identities=16% Similarity=0.182 Sum_probs=208.1
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++.. ++.||+|.+..... ....+.+.+|++++++++||||+++++++.+.+....++|||
T Consensus 13 i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e 89 (396)
T 4eut_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEC
T ss_pred EEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc---cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEe
Confidence 45899999999999999874 78899998853322 122456789999999999999999999998766546799999
Q ss_pred ecCCCChhhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee----cCCCCceeccccchhhh
Q 006178 441 YASNGTLYEHLHYGER-CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL----TEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl----~~~~~~kl~DFGla~~~ 515 (658)
|+++|+|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++..
T Consensus 90 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~ 166 (396)
T 4eut_A 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (396)
T ss_dssp CCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEEC
T ss_pred cCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceEc
Confidence 9999999999975432 2399999999999999999999999 99999999999999 77788999999999765
Q ss_pred hhcCCCCCCcccccCccccCCccccc--------CCCCccccchhhHHHHHHHHhCCCCCCCCC--CcHHHHHHHhhc-C
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEA--------RHLDVQGNIYAFGVLLLEIISGRPPCCKDK--GNLVDWAKDYLE-L 584 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~--------~~~~~ksDVwS~Gvvl~elltG~~p~~~~~--~~~~~~~~~~~~-~ 584 (658)
...... ....++..|+|||.+.+ ..++.++|||||||++|||+||+.||.... ....+....... .
T Consensus 167 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~ 243 (396)
T 4eut_A 167 EDDEQF---VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243 (396)
T ss_dssp CCGGGS---SCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSC
T ss_pred cCCCcc---ccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCC
Confidence 432211 12234667999999865 567889999999999999999999996422 122222222221 1
Q ss_pred Cc-cccccc------------CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 585 PE-VMSYVV------------DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 585 ~~-~~~~~~------------~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
+. ...... -+.....+......+.+++.+||+.||++||++.|+++.++++.+..
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 11 110000 01112345778889999999999999999999999999999987653
No 128
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=7.1e-41 Score=348.71 Aligned_cols=245 Identities=16% Similarity=0.173 Sum_probs=194.9
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.||+|+||.||+|+++ +++.||+|.+...... .....+.+.+|..++..+ +||||+++++++.+.+ ..++||
T Consensus 21 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~--~~~lv~ 97 (345)
T 1xjd_A 21 LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL-MDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE--NLFFVM 97 (345)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhh-hhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC--EEEEEE
Confidence 3489999999999999986 5778999988543211 122345678899999987 9999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 98 E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 172 (345)
T 1xjd_A 98 EYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD 172 (345)
T ss_dssp ECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC
Confidence 9999999999997543 489999999999999999999999 99999999999999999999999999987542211
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
. ......++..|+|||.+.+..++.++|||||||++|||++|+.||..... ............ .+
T Consensus 173 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~~~-----------~~ 237 (345)
T 1xjd_A 173 A--KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--EELFHSIRMDNP-----------FY 237 (345)
T ss_dssp C--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCC-----------CC
T ss_pred C--cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHhCCC-----------CC
Confidence 1 12223456779999999999999999999999999999999999975432 122222111111 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQ-ELC 629 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~-evl 629 (658)
+...+..+.+++.+||+.||++||++. ||+
T Consensus 238 p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 238 PRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 222346688999999999999999997 554
No 129
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4e-40 Score=338.89 Aligned_cols=262 Identities=14% Similarity=0.119 Sum_probs=195.5
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|++. +++.||+|.+.... .......+.+.+|+.++++++||||+++++++.+.+ ..++||
T Consensus 37 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 113 (309)
T 2h34_A 37 RLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETL-SSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG--QLYVDM 113 (309)
T ss_dssp EEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGG-GGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred EEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCccc-ccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC--eEEEEE
Confidence 34589999999999999986 57788888774332 222334567999999999999999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++++|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 114 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 114 RLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp ECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 9999999999998543 489999999999999999999999 99999999999999999999999999987654322
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.. ......++..|+|||.+.+..++.++||||||+++|||+||+.||...... .............. ..
T Consensus 189 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~~~~~~~~~-------~~ 257 (309)
T 2h34_A 189 LT-QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS---VMGAHINQAIPRPS-------TV 257 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH---HHHHHHHSCCCCGG-------GT
T ss_pred cc-cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH---HHHHHhccCCCCcc-------cc
Confidence 11 111223456799999999999999999999999999999999999754322 11111111110000 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhhccCCCch
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRP-SMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~~~~ 641 (658)
+...+..+.+++.+||+.||++|| +++++++.|+........
T Consensus 258 ~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~ 300 (309)
T 2h34_A 258 RPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQ 300 (309)
T ss_dssp STTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC----
T ss_pred CCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhcc
Confidence 222345688999999999999999 999999999988765443
No 130
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.1e-40 Score=338.72 Aligned_cols=269 Identities=14% Similarity=0.185 Sum_probs=205.1
Q ss_pred hcccccCCCCeeEEEEEe-cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++ .+++.||+|.+..... .+++.+|+.++++++|++++..++++...+. ..++|||
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~~~lv~e 85 (296)
T 3uzp_A 13 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK------HPQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVMVME 85 (296)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS------CCHHHHHHHHHHHHTTSTTCCCEEEEEEETT-EEEEEEE
T ss_pred EEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc------hhHHHHHHHHHHHhhcCCCCCccccccCCCC-ceEEEEE
Confidence 348999999999999997 4678899998754332 2358899999999999888777776654332 6799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee---cCCCCceeccccchhhhhh
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~~ 517 (658)
|+ +++|.+++..... .+++.++..++.|++.||+|||++ +|+||||||+||++ ++++.+||+|||+++....
T Consensus 86 ~~-~~~L~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp CC-CCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred ec-CCCHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 99 8899999974433 599999999999999999999999 99999999999999 4788999999999987543
Q ss_pred cCCCC-----CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC----cH-HHHHHHhhcCCcc
Q 006178 518 RSEKN-----PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG----NL-VDWAKDYLELPEV 587 (658)
Q Consensus 518 ~~~~~-----~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~----~~-~~~~~~~~~~~~~ 587 (658)
..... ......++..|+|||.+.+..++.++|||||||++|||+||+.||..... .. ..........+
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-- 238 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-- 238 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC--
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc--
Confidence 32211 12233456779999999999999999999999999999999999975321 11 11111111110
Q ss_pred cccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCchhhhccchhHHhhh
Q 006178 588 MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVELKASSLAWAEL 654 (658)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~l 654 (658)
.... ....+..+.+++.+||+.||++|||+.|+++.|+++...... ....+.+|..+
T Consensus 239 -~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~--~~~~~~dw~~~ 295 (296)
T 3uzp_A 239 -IEVL-------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF--SYDYVFDWNML 295 (296)
T ss_dssp -HHHH-------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC--CSSCCCGGGGC
T ss_pred -hHHH-------HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC--ccccccccccc
Confidence 0000 011235688999999999999999999999999998754322 23446778765
No 131
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.9e-40 Score=351.84 Aligned_cols=243 Identities=16% Similarity=0.205 Sum_probs=185.8
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEec--CCCCceEEEE
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRE--SSPFTRMLVF 439 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~--~~~~~~~lv~ 439 (658)
+.||+|+||.||+|++. +++.||+|++.. ...+.+|++++.++ +||||+++++++.. .+....++||
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~---------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~ 138 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD---------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM 138 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC---------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc---------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEE
Confidence 68999999999999986 577899998742 13467889887555 89999999998865 1112689999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC---CCCceeccccchhhhh
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKLVDFDSWKTIL 516 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~~~ 516 (658)
||+++|+|.+++.......+++.++..|+.||+.||+|||++ +|+||||||+|||++. ++.+||+|||+++...
T Consensus 139 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~ 215 (400)
T 1nxk_A 139 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215 (400)
T ss_dssp ECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence 999999999999876555699999999999999999999999 9999999999999997 7899999999987643
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc-----HHHHHHHhhcCCcccccc
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-----LVDWAKDYLELPEVMSYV 591 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~ 591 (658)
... ......++..|+|||++.+..++.++|||||||++|||+||+.||...... ....+.. ... ..
T Consensus 216 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~---~~~---~~ 286 (400)
T 1nxk_A 216 SHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM---GQY---EF 286 (400)
T ss_dssp --------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHH---TCC---CC
T ss_pred CCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHc---Ccc---cC
Confidence 221 112233466799999999999999999999999999999999999754321 1111111 000 00
Q ss_pred cCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 592 VDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+.. ...+..+.+|+.+||+.||++|||+.|+++.
T Consensus 287 ~~~~~----~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 287 PNPEW----SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp CTTTT----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCccc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01111 1234568899999999999999999999985
No 132
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=5.9e-41 Score=356.68 Aligned_cols=259 Identities=17% Similarity=0.162 Sum_probs=198.3
Q ss_pred HHHHHHhhhc--ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecC
Q 006178 354 ELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES 430 (658)
Q Consensus 354 ~l~~~~~~f~--~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 430 (658)
++.....+|. +.||+|+||.||+|++. +++.+|+|.+...... .....+.+.+|+.+++.++|||||++++++.+.
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~-~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI-KRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhh-hhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 3333444554 89999999999999987 4678888887542211 111223578999999999999999999999987
Q ss_pred CCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceecccc
Q 006178 431 SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFD 510 (658)
Q Consensus 431 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 510 (658)
+ ..++||||+++|+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 142 ~--~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG 213 (410)
T 3v8s_A 142 R--YLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFG 213 (410)
T ss_dssp S--EEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred C--EEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccc
Confidence 7 889999999999999999754 489999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhcCCCCCCcccccCccccCCcccccCC----CCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCc
Q 006178 511 SWKTILARSEKNPGTLGSQGAICILPSSLEARH----LDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPE 586 (658)
Q Consensus 511 la~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~----~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 586 (658)
+|+.+...... ......+++.|+|||++.+.. ++.++|||||||++|||+||+.||..... ............
T Consensus 214 ~a~~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--~~~~~~i~~~~~ 290 (410)
T 3v8s_A 214 TCMKMNKEGMV-RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL--VGTYSKIMNHKN 290 (410)
T ss_dssp TCEECCTTSEE-ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHTHHH
T ss_pred eeEeeccCCcc-cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh--hhHHHHHHhccc
Confidence 99765322111 111234567899999998765 88999999999999999999999975432 111111111000
Q ss_pred ccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 006178 587 VMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITK--RPSMQELCTM 631 (658)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~--RPs~~evl~~ 631 (658)
...-+... ..+..+.+|+.+||+.+|.+ ||+++||+++
T Consensus 291 ---~~~~p~~~----~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 291 ---SLTFPDDN----DISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp ---HCCCCTTC----CCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred ---cccCCCcc----cccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 00011111 12356889999999999988 9999999875
No 133
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.3e-40 Score=341.97 Aligned_cols=259 Identities=17% Similarity=0.194 Sum_probs=186.9
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.||+|++..... ....+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e 83 (317)
T 2pmi_A 9 QLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE---EGTPSTAIREISLMKELKHENIVRLYDVIHTEN--KLTLVFE 83 (317)
T ss_dssp ----------CEEEEEECSSSCCEEEEEEEECCST---TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTT--EEEEEEE
T ss_pred EeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc---cccHHHHHHHHHHHHhcCCCCcceEEEEEEECC--eEEEEEE
Confidence 3478999999999999976 578899998854432 122356889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCC----CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 441 YASNGTLYEHLHYGE----RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
|++ |+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 997 59999886421 23589999999999999999999999 99999999999999999999999999998654
Q ss_pred hcCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCC-ccc-ccc-
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELP-EVM-SYV- 591 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~-~~~-~~~- 591 (658)
..... .....++..|+|||.+.+ ..++.++|||||||++|||+||+.||...... ....+......+ ... ...
T Consensus 160 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 160 IPVNT--FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp SCCCC--CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGG
T ss_pred CCccc--CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhh
Confidence 22211 122334677999999876 46899999999999999999999999755432 111111111110 000 000
Q ss_pred ----cCCcCCC-------------CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 592 ----VDPELKH-------------FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 592 ----~~~~~~~-------------~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+.... .....+..+.+++.+||+.||++|||+.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0000000 011234568899999999999999999999864
No 134
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=9.8e-41 Score=343.77 Aligned_cols=245 Identities=15% Similarity=0.134 Sum_probs=187.7
Q ss_pred HhhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceE
Q 006178 359 CEDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 359 ~~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 436 (658)
.+...++||+|+||+||+|++. +++.||||++...... ......+..|+..+.++ +||||+++++++.+.+ ..+
T Consensus 58 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~--~~~ 133 (311)
T 3p1a_A 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRG--PKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG--ILY 133 (311)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCS--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEE
T ss_pred heeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccC--hHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC--EEE
Confidence 3444589999999999999987 6889999987543222 22334556677666666 9999999999999877 789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+ +++|.+++..... .+++..+..|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 134 lv~e~~-~~~L~~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 134 LQTELC-GPSLQQHCEAWGA-SLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EEEECC-CCBHHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred EEEecc-CCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 999999 6799998875433 599999999999999999999999 99999999999999999999999999987653
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
... ......++..|+|||++.+ .++.++|||||||++|||++|..|+... ..+.. .. . ......
T Consensus 209 ~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~~-~~-~-~~~~~~----- 272 (311)
T 3p1a_A 209 TAG---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----EGWQQ-LR-Q-GYLPPE----- 272 (311)
T ss_dssp ---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHHHH-HT-T-TCCCHH-----
T ss_pred cCC---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHHH-Hh-c-cCCCcc-----
Confidence 221 1222335677999998875 7999999999999999999997766432 11111 11 0 000000
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.+...+..+.+++.+||+.||++|||+.|+++
T Consensus 273 --~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 273 --FTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp --HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --cccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 01123466889999999999999999999986
No 135
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=352.45 Aligned_cols=266 Identities=19% Similarity=0.276 Sum_probs=201.2
Q ss_pred hhcccccCCCCeeEEEEEe-----cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 361 DFSNIIGSSPDSLVYKGTM-----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~-----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
.+.+.||+|+||.||+|++ .+++.||+|++... .....+.+.+|++++++++||||+++++++...+....
T Consensus 44 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 44 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp EEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC----CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred eeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 3458999999999999984 35788999987532 22345679999999999999999999999876553367
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
++||||+++|+|.+++..... .+++.++..++.|+++||+|||++ +|+||||||+||++++++.+||+|||+++..
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTT-SSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEECCCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 999999999999999986533 589999999999999999999999 9999999999999999999999999998865
Q ss_pred hhcCCC-CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCc------cc
Q 006178 516 LARSEK-NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPE------VM 588 (658)
Q Consensus 516 ~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~------~~ 588 (658)
...... .......++..|+|||.+.+..++.++||||||+++|||+||..|+........ ........ .+
T Consensus 196 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 272 (326)
T 2w1i_A 196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM---RMIGNDKQGQMIVFHL 272 (326)
T ss_dssp CSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHH---HHHCTTCCTHHHHHHH
T ss_pred cccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHH---HhhccccchhhhHHHH
Confidence 432211 111222334569999999988999999999999999999999999753211111 00000000 00
Q ss_pred -ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 589 -SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 589 -~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
..+........+...+..+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 273 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0000111112233445678899999999999999999999999998754
No 136
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.8e-40 Score=341.84 Aligned_cols=262 Identities=16% Similarity=0.212 Sum_probs=193.9
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCC--ceEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF--TRML 437 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~--~~~l 437 (658)
.+.+.||+|+||.||+|++. +++.||+|.+..... ......+.+.+|++++++++||||+++++++...... ..++
T Consensus 15 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~l 93 (311)
T 3ork_A 15 ELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLA-RDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93 (311)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTT-TSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EEEEEEccCCCEEEEEEEECCCCceEEEEEeCcccc-CCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEE
Confidence 34589999999999999974 678899998754322 2334456789999999999999999999998765422 3489
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+++|+|.+++...+ .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 94 v~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 94 VMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp EEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred EEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 999999999999997554 489999999999999999999999 999999999999999999999999999987643
Q ss_pred cCCCCC-CcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcC
Q 006178 518 RSEKNP-GTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPEL 596 (658)
Q Consensus 518 ~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (658)
...... .....++..|+|||.+.+..++.++|||||||++|||+||+.||......... ..............
T Consensus 169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~---- 242 (311)
T 3ork_A 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA--YQHVREDPIPPSAR---- 242 (311)
T ss_dssp -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH--HHHHHCCCCCHHHH----
T ss_pred cccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH--HHHhcCCCCCcccc----
Confidence 322111 11223467799999999999999999999999999999999999754432221 11111111100000
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHH-HHHHHhhccC
Q 006178 597 KHFSYDDLKVICEVVNLCVNPDITKRPSMQE-LCTMLEGRID 637 (658)
Q Consensus 597 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~e-vl~~L~~~~~ 637 (658)
....+..+.+++.+||+.||++||++.+ +...+.....
T Consensus 243 ---~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 281 (311)
T 3ork_A 243 ---HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281 (311)
T ss_dssp ---STTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred ---cCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence 0112356889999999999999996555 4455665543
No 137
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.3e-40 Score=335.50 Aligned_cols=244 Identities=20% Similarity=0.247 Sum_probs=194.2
Q ss_pred cccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|++.. +..+|+|.+..... ......+.+.+|+.++++++||||+++++++.+.+ ..++||||
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 90 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL-EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT--RVYLILEY 90 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEECC
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEecccc-chhhHHHHHHHHHHHHHcCCCCCCcchhheEecCC--EEEEEEec
Confidence 4889999999999999874 56788888754321 12223467899999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 91 ~~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~-- 163 (279)
T 3fdn_A 91 APLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-- 163 (279)
T ss_dssp CTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC------
T ss_pred CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCccc--
Confidence 99999999997543 489999999999999999999999 99999999999999999999999999886543221
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
.....++..|+|||.+.+..++.++||||||+++|||++|+.||...... ........... ..+.
T Consensus 164 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~-----------~~~~ 228 (279)
T 3fdn_A 164 --RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--ETYKRISRVEF-----------TFPD 228 (279)
T ss_dssp ------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHHTCC-----------CCCT
T ss_pred --ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH--HHHHHHHhCCC-----------CCCC
Confidence 12223456799999999999999999999999999999999999754321 11111111100 1122
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+..+.+++.+||+.||++|||+.|+++.
T Consensus 229 ~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 229 FVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp TSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred cCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 234567899999999999999999999975
No 138
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=6.8e-41 Score=347.62 Aligned_cols=256 Identities=21% Similarity=0.337 Sum_probs=199.5
Q ss_pred hhcccccCCCCeeEEEEEecC-CCe--EEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG-GPE--IAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~-~~~--vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 436 (658)
.+.+.||+|+||.||+|++.. +.. +|+|.+.... .....+.+.+|+++++++ +||||+++++++.+.+ ..+
T Consensus 28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~~ 102 (327)
T 1fvr_A 28 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YLY 102 (327)
T ss_dssp EEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT--EEE
T ss_pred cceeeeecCCCceEEEEEEccCCcccceeeeeecccc---chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC--ceE
Confidence 345899999999999999764 444 4777764322 122345688999999999 9999999999998877 789
Q ss_pred EEEEecCCCChhhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC
Q 006178 437 LVFDYASNGTLYEHLHYGE--------------RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF 502 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~ 502 (658)
+||||+++|+|.+++.... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCC
Confidence 9999999999999997543 23689999999999999999999999 999999999999999999
Q ss_pred CceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHh
Q 006178 503 SPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDY 581 (658)
Q Consensus 503 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~ 581 (658)
.+||+|||+++..... ........+..|+|||.+.+..++.++||||||+++|||+| |+.||..... .......
T Consensus 180 ~~kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--~~~~~~~ 254 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--AELYEKL 254 (327)
T ss_dssp CEEECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHG
T ss_pred eEEEcccCcCcccccc---ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH--HHHHHHh
Confidence 9999999998743221 11222334567999999998889999999999999999998 9999965432 2222211
Q ss_pred hcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 582 LELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
... .....+...+..+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 255 ~~~----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 255 PQG----------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp GGT----------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred hcC----------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 111 001122234467889999999999999999999999999887643
No 139
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=5.6e-41 Score=340.74 Aligned_cols=250 Identities=16% Similarity=0.226 Sum_probs=198.3
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecC--------
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES-------- 430 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-------- 430 (658)
+...+.||+|+||.||+|++. +++.||+|++.... +.+.+|++++++++||||+++++++...
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp EEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS--------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred cceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc--------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 334589999999999999986 68899999885432 2467899999999999999999988541
Q ss_pred ------CCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCc
Q 006178 431 ------SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSP 504 (658)
Q Consensus 431 ------~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~ 504 (658)
.....++||||+++|+|.+++.......+++..+..++.|++.||+|||++ +|+||||||+||++++++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCE
Confidence 111579999999999999999765445699999999999999999999999 99999999999999999999
Q ss_pred eeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcC
Q 006178 505 KLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLEL 584 (658)
Q Consensus 505 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 584 (658)
||+|||+++....... .....++..|+|||.+.+..++.++||||||+++|||+||..|+... .........
T Consensus 162 kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~~~~~~~~~- 233 (284)
T 2a19_B 162 KIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----SKFFTDLRD- 233 (284)
T ss_dssp EECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----HHHHHHHHT-
T ss_pred EECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----HHHHHHhhc-
Confidence 9999999876543221 12223566799999999999999999999999999999999986321 111111111
Q ss_pred CcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCc
Q 006178 585 PEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640 (658)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 640 (658)
... +...+..+.+++.+||+.||++|||+.|+++.|+.+.....
T Consensus 234 ---------~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 234 ---------GII---SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp ---------TCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred ---------ccc---cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 001 11123557899999999999999999999999998876543
No 140
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=4e-41 Score=358.24 Aligned_cols=265 Identities=16% Similarity=0.134 Sum_probs=200.8
Q ss_pred ccHHHHHHHHhhhc--ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeE
Q 006178 350 FSRQELEVACEDFS--NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGY 426 (658)
Q Consensus 350 ~~~~~l~~~~~~f~--~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~ 426 (658)
+.++++....++|. +.||+|+||.||+|+.+ +++.||+|++...... .....+.+.+|..++.+++||||++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~-~~~~~~~~~~E~~il~~~~hp~Iv~l~~~ 129 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDML-KRGEVSCFREERDVLVNGDRRWITQLHFA 129 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HHGGGCCHHHHHHHHHHSCTTTBCCEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhh-hHHHHHHHHHHHHHHHhcCCCCeeeEEEE
Confidence 34445555556665 89999999999999986 6788999988543211 11223458899999999999999999999
Q ss_pred EecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCcee
Q 006178 427 CRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKL 506 (658)
Q Consensus 427 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl 506 (658)
+.+.+ ..|+||||+++|+|.+++.+.+ ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||
T Consensus 130 ~~~~~--~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL 203 (412)
T 2vd5_A 130 FQDEN--YLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRL 203 (412)
T ss_dssp EECSS--EEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEE
T ss_pred EeeCC--EEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEE
Confidence 99887 8899999999999999997543 2599999999999999999999999 9999999999999999999999
Q ss_pred ccccchhhhhhcCCCCCCcccccCccccCCcccc-------cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHH
Q 006178 507 VDFDSWKTILARSEKNPGTLGSQGAICILPSSLE-------ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK 579 (658)
Q Consensus 507 ~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~-------~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~ 579 (658)
+|||+++.+..... .......++..|+|||++. ...++.++|||||||++|||+||+.||...... +...
T Consensus 204 ~DFGla~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--~~~~ 280 (412)
T 2vd5_A 204 ADFGSCLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA--ETYG 280 (412)
T ss_dssp CCCTTCEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHH
T ss_pred eechhheeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH--HHHH
Confidence 99999976533211 1112234567899999987 356899999999999999999999999754321 1111
Q ss_pred HhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCC---CCHHHHHHH
Q 006178 580 DYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKR---PSMQELCTM 631 (658)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~R---Ps~~evl~~ 631 (658)
........ . .....+...+.++.+|+.+||+ +|.+| |+++|++++
T Consensus 281 ~i~~~~~~---~---~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 281 KIVHYKEH---L---SLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HHHTHHHH---C---CCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred HHHhcccC---c---CCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 11110000 0 0011112234678899999999 99998 589988764
No 141
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=3.4e-40 Score=343.73 Aligned_cols=248 Identities=17% Similarity=0.178 Sum_probs=193.0
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~l 437 (658)
+.+.+.||+|+||.||+|++. +++.+|+|.+..... ...+|++++.++ +||||+++++++.+.+ ..++
T Consensus 24 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~--~~~l 93 (342)
T 2qr7_A 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR--------DPTEEIEILLRYGQHPNIITLKDVYDDGK--YVYV 93 (342)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC--------CCHHHHHHHHHHTTSTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC--------ChHHHHHHHHHhcCCCCcCeEEEEEEcCC--EEEE
Confidence 344589999999999999986 577899998743321 234688889888 7999999999999877 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC----CCceeccccchh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED----FSPKLVDFDSWK 513 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~----~~~kl~DFGla~ 513 (658)
||||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||+.++ +.+||+|||+++
T Consensus 94 v~E~~~gg~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~ 168 (342)
T 2qr7_A 94 VTELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168 (342)
T ss_dssp EECCCCSCBHHHHHHTCT--TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred EEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence 999999999999997654 499999999999999999999999 99999999999998543 349999999998
Q ss_pred hhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCCccccccc
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELPEVMSYVV 592 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~ 592 (658)
........ .....++..|+|||.+.+..++.++|||||||++|||++|+.||..... ...+............ .
T Consensus 169 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~---~ 243 (342)
T 2qr7_A 169 QLRAENGL--LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSL---S 243 (342)
T ss_dssp ECBCTTCC--BCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCC---C
T ss_pred cCcCCCCc--eeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCccc---C
Confidence 65432221 1223346779999999888899999999999999999999999975432 2223222222111100 0
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. ......+..+.+|+.+||+.||++|||+.|+++.
T Consensus 244 ~----~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 244 G----GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp S----TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred c----cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 1112334668899999999999999999999864
No 142
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.5e-40 Score=345.71 Aligned_cols=248 Identities=18% Similarity=0.145 Sum_probs=196.5
Q ss_pred hhcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
.+.+.||+|+||.||+|+... ++.||+|.+...... .....+.+.+|..++..+ +||||+++++++.+.+ ..++|
T Consensus 23 ~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~-~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--~~~lv 99 (353)
T 2i0e_A 23 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI-QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RLYFV 99 (353)
T ss_dssp EEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-cchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC--EEEEE
Confidence 345899999999999999875 678899887543211 122345688999999988 8999999999999877 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 100 ~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 100 MEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp EECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 99999999999997544 499999999999999999999999 9999999999999999999999999998753221
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
.. ......++..|+|||.+.+..++.++|||||||++|||++|+.||..... ............ .
T Consensus 175 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~i~~~~~-----------~ 239 (353)
T 2i0e_A 175 GV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQSIMEHNV-----------A 239 (353)
T ss_dssp TC--CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCC-----------C
T ss_pred Cc--ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH--HHHHHHHHhCCC-----------C
Confidence 11 12223456779999999999999999999999999999999999975432 222222221111 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPS-----MQELCTM 631 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs-----~~evl~~ 631 (658)
++...+..+.+++.+||+.||++||+ ++||++.
T Consensus 240 ~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 240 YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 22234467889999999999999995 4666543
No 143
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.9e-40 Score=347.70 Aligned_cols=253 Identities=19% Similarity=0.161 Sum_probs=193.5
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-----CCCccceeeEEecCCCCce
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-----HENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----H~nIv~l~~~~~~~~~~~~ 435 (658)
+.+.||+|+||.||+|++. +++.||+|.+... ....+.+..|+.+++++. ||||+++++++...+ ..
T Consensus 39 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~--~~ 111 (360)
T 3llt_A 39 VIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-----KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD--HM 111 (360)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETT--EE
T ss_pred EEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-----hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECC--ee
Confidence 3489999999999999985 6778999987421 223456788999999996 999999999999877 78
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC---------------
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE--------------- 500 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~--------------- 500 (658)
++||||+ +++|.+++.......+++.++..++.||+.||+|||++ +|+||||||+|||+++
T Consensus 112 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~ 187 (360)
T 3llt_A 112 CLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRVTD 187 (360)
T ss_dssp EEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEECTTT
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhcccc
Confidence 9999999 88999999876655699999999999999999999999 9999999999999975
Q ss_pred ----------CCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCC
Q 006178 501 ----------DFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKD 570 (658)
Q Consensus 501 ----------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~ 570 (658)
++.+||+|||+++...... ....++..|+|||.+.+..++.++|||||||++|||+||+.||...
T Consensus 188 ~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 188 GKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp CCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence 7889999999987643211 1223466799999999999999999999999999999999999754
Q ss_pred CCc-HHHHHHHhhcC-Cc---------ccccccCC-c----CCCC--C---------------HHHHHHHHHHHHHccCC
Q 006178 571 KGN-LVDWAKDYLEL-PE---------VMSYVVDP-E----LKHF--S---------------YDDLKVICEVVNLCVNP 617 (658)
Q Consensus 571 ~~~-~~~~~~~~~~~-~~---------~~~~~~~~-~----~~~~--~---------------~~~~~~~~~li~~cl~~ 617 (658)
... ....+...... +. ......+. . .... . ....+.+.+|+.+||+.
T Consensus 263 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~ 342 (360)
T 3llt_A 263 EHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQI 342 (360)
T ss_dssp SHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCS
T ss_pred cHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcC
Confidence 321 11111111100 00 00000000 0 0000 0 00125678999999999
Q ss_pred CCCCCCCHHHHHH
Q 006178 618 DITKRPSMQELCT 630 (658)
Q Consensus 618 dP~~RPs~~evl~ 630 (658)
||++|||+.|+++
T Consensus 343 dP~~Rpta~elL~ 355 (360)
T 3llt_A 343 DPTLRPSPAELLK 355 (360)
T ss_dssp SGGGSCCHHHHTT
T ss_pred ChhhCCCHHHHhc
Confidence 9999999999875
No 144
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=345.19 Aligned_cols=241 Identities=18% Similarity=0.205 Sum_probs=193.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeecccc----chhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW----TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.||+|+||.||+|++. +++.||+|.+....... .....+.+.+|++++++++||||+++++++.+.+ ..+
T Consensus 28 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~--~~~ 105 (335)
T 3dls_A 28 TMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG--FFQ 105 (335)
T ss_dssp EEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS--EEE
T ss_pred EEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC--EEE
Confidence 3489999999999999975 57789999886543111 1112335778999999999999999999998877 789
Q ss_pred EEEEecCCC-ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 437 LVFDYASNG-TLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 437 lv~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
+||||+.+| +|.+++.... .+++..+..|+.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++..
T Consensus 106 lv~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 180 (335)
T 3dls_A 106 LVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180 (335)
T ss_dssp EEEECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence 999999777 9999998654 499999999999999999999999 9999999999999999999999999998765
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCC-CccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHL-DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
.... ......++..|+|||.+.+..+ +.++|||||||++|||++|+.||..... ......
T Consensus 181 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------------~~~~~~-- 241 (335)
T 3dls_A 181 ERGK---LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE--------------TVEAAI-- 241 (335)
T ss_dssp CTTC---CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG--------------GTTTCC--
T ss_pred CCCC---ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH--------------HHhhcc--
Confidence 3221 1122335677999999988876 8899999999999999999999954211 000000
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 242 ---~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 242 ---HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ---CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ---CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111234568899999999999999999999985
No 145
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=7.4e-40 Score=338.07 Aligned_cols=246 Identities=20% Similarity=0.243 Sum_probs=189.2
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++.++ +||||+++++++.+.+ ..++||||
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~--~~~lv~e~ 92 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQP----GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEED--RFYLVFEK 92 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCS----SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCc----chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC--EEEEEEEc
Confidence 67999999999999975 67899999885432 12345788999999995 7999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC---ceeccccchhhhhhc
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS---PKLVDFDSWKTILAR 518 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGla~~~~~~ 518 (658)
+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||+++.....
T Consensus 93 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 93 MRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred CCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 99999999997643 489999999999999999999999 9999999999999998775 999999998765322
Q ss_pred CCC-----CCCcccccCccccCCccccc-----CCCCccccchhhHHHHHHHHhCCCCCCCCCCcH-------------H
Q 006178 519 SEK-----NPGTLGSQGAICILPSSLEA-----RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-------------V 575 (658)
Q Consensus 519 ~~~-----~~~~~~~~~~~~~aPE~~~~-----~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-------------~ 575 (658)
... .......++..|+|||.+.+ ..++.++|||||||++|||+||+.||....... .
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 247 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence 110 11112235677999999875 568899999999999999999999997543211 1
Q ss_pred HHHHHhhcCCcccccccCCcCCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 576 DWAKDYLELPEVMSYVVDPELKHFSY----DDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
......... . ..++. ..+..+.+++.+||+.||++|||+.|+++.
T Consensus 248 ~~~~~i~~~----------~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 248 MLFESIQEG----------K-YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHC----------C-CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHhcc----------C-cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 111111111 0 01111 124568899999999999999999999874
No 146
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.3e-39 Score=330.61 Aligned_cols=258 Identities=18% Similarity=0.228 Sum_probs=199.6
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccc--cchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH--WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~--~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.+.||+|+||.||+|+.. +++.+|+|.+...... ......+.+.+|+.++++++||||+++++++.+.+ ..+
T Consensus 7 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~ 84 (283)
T 3bhy_A 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT--DVV 84 (283)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEE
T ss_pred hhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC--eEE
Confidence 445689999999999999987 5789999988654322 11223567999999999999999999999999877 789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC----Cceeccccch
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF----SPKLVDFDSW 512 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGla 512 (658)
+||||+++++|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||++++++ .+||+|||++
T Consensus 85 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEeecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 9999999999999997543 489999999999999999999999 999999999999999877 7999999998
Q ss_pred hhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccccccc
Q 006178 513 KTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVV 592 (658)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (658)
........ .....++..|+|||.+.+..++.++||||||+++|||+||+.||...... ................
T Consensus 160 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~- 233 (283)
T 3bhy_A 160 HKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ--ETLTNISAVNYDFDEE- 233 (283)
T ss_dssp EECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHTTCCCCCHH-
T ss_pred eeccCCCc---ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH--HHHHHhHhcccCCcch-
Confidence 76532211 11223456799999999999999999999999999999999999754321 1111111110000000
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--Hhhcc
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM--LEGRI 636 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~--L~~~~ 636 (658)
.....+..+.+++.+||+.||++|||+.|+++. ++.+.
T Consensus 234 ------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 234 ------YFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp ------HHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred ------hcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 001123568899999999999999999999973 44443
No 147
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.4e-40 Score=358.26 Aligned_cols=247 Identities=17% Similarity=0.205 Sum_probs=198.6
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|++. +|+.||+|.+...... .....+.+.+|+++++.++||||+++++++.+.+ ..++||
T Consensus 19 ~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~--~~~lv~ 95 (476)
T 2y94_A 19 ILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIR-SLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS--DIFMVM 95 (476)
T ss_dssp EEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHH-HTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhcc-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEE
Confidence 34588999999999999986 6889999988543211 1223457899999999999999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++...+ .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 96 E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 96 EYVSGGELFDYICKNG--RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp ECCSSEEHHHHTTSSS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 9999999999997554 499999999999999999999999 99999999999999999999999999988653221
Q ss_pred CCCCCcccccCccccCCcccccCCC-CccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHL-DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
......++..|+|||.+.+..+ +.++|||||||++|||++|+.||...... ........... .
T Consensus 171 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--~~~~~i~~~~~-----------~ 234 (476)
T 2y94_A 171 ---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP--TLFKKICDGIF-----------Y 234 (476)
T ss_dssp ---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH--HHHHHHHTTCC-----------C
T ss_pred ---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH--HHHHHHhcCCc-----------C
Confidence 1122345677999999988776 78999999999999999999999754322 22222111100 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 235 ~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 235 TPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred CCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 122233568899999999999999999999973
No 148
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.6e-39 Score=330.06 Aligned_cols=249 Identities=19% Similarity=0.190 Sum_probs=196.5
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|.+. +++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 10 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~e 85 (284)
T 3kk8_A 10 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYLVFD 85 (284)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred hhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC--CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC--EEEEEEe
Confidence 3488999999999999986 578899998754432 2334467889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC---ceeccccchhhhhh
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS---PKLVDFDSWKTILA 517 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGla~~~~~ 517 (658)
|+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||++.....
T Consensus 86 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 86 LVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred cCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 999999999887553 489999999999999999999999 9999999999999986655 99999999876532
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
... .....++..|+|||.+.+..++.++||||||+++|||++|+.||...... ........... ....+...
T Consensus 161 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~---~~~~~~~~ 232 (284)
T 3kk8_A 161 SEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQIKAGAY---DYPSPEWD 232 (284)
T ss_dssp SCB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCC---CCCTTTTT
T ss_pred Ccc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--HHHHHHHhccc---cCCchhhc
Confidence 221 11233466799999999999999999999999999999999999654322 11111111100 01111111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+..+.+++.+||+.||++|||+.|+++.
T Consensus 233 ----~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 233 ----TVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp ----TSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ----ccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 233568899999999999999999999874
No 149
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.3e-39 Score=337.79 Aligned_cols=249 Identities=15% Similarity=0.157 Sum_probs=195.8
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.||+|+||.||+|+.. +++.||+|.+...... ......+.+|+.+++++ +||||+++++++.+.+ ..++||||
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~--~~~lv~e~ 110 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG--QDCRAEILHEIAVLELAKSCPRVINLHEVYENTS--EIILILEY 110 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETT--EECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcc--hHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC--eEEEEEEe
Confidence 78999999999999987 5789999988654322 22346789999999999 5799999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC---CCCceeccccchhhhhhc
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~~~~~ 518 (658)
+++|+|.+++.......+++.++..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||+++.....
T Consensus 111 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 187 (327)
T 3lm5_A 111 AAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187 (327)
T ss_dssp CTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence 9999999999765555799999999999999999999999 9999999999999997 789999999999865422
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
.. .....++..|+|||.+.+..++.++|||||||++|||+||+.||........ .......... ... .
T Consensus 188 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~i~~~~~~---~~~----~ 255 (327)
T 3lm5_A 188 CE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET--YLNISQVNVD---YSE----E 255 (327)
T ss_dssp ---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHTCCC---CCT----T
T ss_pred cc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH--HHHHHhcccc---cCc----h
Confidence 21 1122356779999999999999999999999999999999999975443211 1111111000 001 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.....+..+.+++.+||+.||++|||++|+++.
T Consensus 256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 256 TFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred hhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 112234568899999999999999999999875
No 150
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=3.9e-41 Score=341.15 Aligned_cols=254 Identities=19% Similarity=0.199 Sum_probs=197.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.+|+|.+..... .....+.+.+|++++++++||||+++++++.+......++|||
T Consensus 10 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 87 (279)
T 2w5a_A 10 VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM--TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME 87 (279)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEE
T ss_pred eehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC--CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEe
Confidence 3488999999999999986 578888888754332 2334567999999999999999999999886533337899999
Q ss_pred ecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC-----eeeccCCCcceeecCCCCceeccccchh
Q 006178 441 YASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPP-----FTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 441 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~-----ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
|+++|+|.+++... ....+++..+..++.|++.||+|||+. + |+||||||+||++++++.+||+|||+++
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 88 YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp CCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred CCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999743 233599999999999999999999998 7 9999999999999999999999999987
Q ss_pred hhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccC
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (658)
....... ......++..|+|||.+.+..++.++||||||+++|||+||+.||...... .........
T Consensus 165 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~i~~~--------- 231 (279)
T 2w5a_A 165 ILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--ELAGKIREG--------- 231 (279)
T ss_dssp HC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHT---------
T ss_pred eeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH--HHHHHHhhc---------
Confidence 6532211 011123456799999999999999999999999999999999999754321 111111111
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEG 634 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~ 634 (658)
.....+...+..+.+++.+||+.||++|||+.|+++.+..
T Consensus 232 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 232 -KFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp -CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred -ccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 1111222344678899999999999999999999987654
No 151
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.7e-40 Score=333.26 Aligned_cols=245 Identities=14% Similarity=0.162 Sum_probs=176.4
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.||+|.+..... ......+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 17 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 93 (275)
T 2eue_A 17 IVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVL-AKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD--EIIMVIE 93 (275)
T ss_dssp CCC---------EEEEECTTTCCEEEEEEECSCC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--CEEEEEE
T ss_pred EEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhc-chHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC--eEEEEeh
Confidence 3478999999999999975 678899998754332 12233567899999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+ +++|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.......
T Consensus 94 ~~-~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 167 (275)
T 2eue_A 94 YA-GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp CC-CEEHHHHHHTSS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred hc-CCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCccc
Confidence 99 678988887554 499999999999999999999999 999999999999999999999999999876543221
Q ss_pred CCCCcccccCccccCCcccccCCC-CccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHL-DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.....++..|+|||.+.+..+ +.++||||||+++|||+||+.||...... ........... ..
T Consensus 168 ---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~-----------~~ 231 (275)
T 2eue_A 168 ---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--VLFKNISNGVY-----------TL 231 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCC-----------CC
T ss_pred ---ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCC-----------CC
Confidence 112234567999999987765 78999999999999999999999754322 22121111111 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 232 ~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 232 PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred CccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 22234568899999999999999999999763
No 152
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=9.2e-40 Score=354.24 Aligned_cols=256 Identities=17% Similarity=0.152 Sum_probs=190.1
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC----CceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----~~~~ 436 (658)
+.+.||+|+||.||+|++. +++.||+|++.... ......+++.+|+.++++++||||+++++++..... ...+
T Consensus 66 ~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 143 (464)
T 3ttj_A 66 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY 143 (464)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG--GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEE
T ss_pred EEEEeecCCCeEEEEEEECCCCCEEEEEEECccc--cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEE
Confidence 3488999999999999976 57889999885432 223345678899999999999999999999975431 2579
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++ +|.+.+.. .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+...
T Consensus 144 lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 215 (464)
T 3ttj_A 144 LVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215 (464)
T ss_dssp EEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred EEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence 99999965 67777753 389999999999999999999999 99999999999999999999999999998654
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHH--HhhcCC--cc-----
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK--DYLELP--EV----- 587 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~--~~~~~~--~~----- 587 (658)
... ......++..|+|||++.+..|+.++||||+||++|||++|+.||.+.+. ...+.. .....+ +.
T Consensus 216 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~-~~~~~~i~~~lg~p~~~~~~~~~ 291 (464)
T 3ttj_A 216 TSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY-IDQWNKVIEQLGTPCPEFMKKLQ 291 (464)
T ss_dssp -CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCHHHHTTSC
T ss_pred CCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCCHHHHHHcc
Confidence 321 12223456779999999999999999999999999999999999975432 111111 111000 00
Q ss_pred --cc---------------cccCCcCCC----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 588 --MS---------------YVVDPELKH----FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 588 --~~---------------~~~~~~~~~----~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. ......... ........+.+|+.+||+.||++|||++|+++.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 000000000 011235678999999999999999999999875
No 153
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.9e-40 Score=351.17 Aligned_cols=262 Identities=17% Similarity=0.210 Sum_probs=187.4
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCceEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~lv 438 (658)
.+.+.||+|+||.||+|.+. +++.||+|++..... .....+.+.+|+.+++++. ||||+++++++...+....++|
T Consensus 12 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv 89 (388)
T 3oz6_A 12 ELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQ--NSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLV 89 (388)
T ss_dssp EEEEC-------CEEEEEETTTCCEEEEEEECC--C--CHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEE
T ss_pred EEEEEeeeCCCeEEEEEEECCCCCEEEEEEeccccc--ChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEE
Confidence 34589999999999999975 678999998854322 2334567889999999996 9999999999986554468999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||++ |+|.+++... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+.+...
T Consensus 90 ~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 162 (388)
T 3oz6_A 90 FDYME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNI 162 (388)
T ss_dssp EECCS-EEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESSSC
T ss_pred ecccC-cCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccccccc
Confidence 99997 6999999753 589999999999999999999999 9999999999999999999999999999865321
Q ss_pred CC-------------------CCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHH
Q 006178 519 SE-------------------KNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDW 577 (658)
Q Consensus 519 ~~-------------------~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~ 577 (658)
.. ........++..|+|||.+.+ ..++.++|||||||++|||++|+.||.+.... ....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~ 242 (388)
T 3oz6_A 163 RRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLER 242 (388)
T ss_dssp CCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred ccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 10 011112345677999999986 67999999999999999999999999754321 1111
Q ss_pred HHHhhcCCcc--ccccc------------------CCcCCCCCH-------------HHHHHHHHHHHHccCCCCCCCCC
Q 006178 578 AKDYLELPEV--MSYVV------------------DPELKHFSY-------------DDLKVICEVVNLCVNPDITKRPS 624 (658)
Q Consensus 578 ~~~~~~~~~~--~~~~~------------------~~~~~~~~~-------------~~~~~~~~li~~cl~~dP~~RPs 624 (658)
+......+.. ...+. ......... ..+..+.+|+.+||+.||++|||
T Consensus 243 i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t 322 (388)
T 3oz6_A 243 IIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRIS 322 (388)
T ss_dssp HHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCC
T ss_pred HHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCC
Confidence 1111111100 00000 000000000 22456889999999999999999
Q ss_pred HHHHHHH
Q 006178 625 MQELCTM 631 (658)
Q Consensus 625 ~~evl~~ 631 (658)
++|+++.
T Consensus 323 ~~e~l~H 329 (388)
T 3oz6_A 323 ANDALKH 329 (388)
T ss_dssp HHHHTTS
T ss_pred HHHHhCC
Confidence 9999886
No 154
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.8e-39 Score=328.64 Aligned_cols=243 Identities=15% Similarity=0.154 Sum_probs=193.8
Q ss_pred hhhcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||.||+|++.. +..+|+|++..... ...+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 84 (277)
T 3f3z_A 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV----EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNT--DIYLV 84 (277)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC----SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc----chHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--eEEEE
Confidence 3445899999999999999875 56788888754322 22457899999999999999999999999877 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee---cCCCCceeccccchhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~ 515 (658)
|||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++...
T Consensus 85 ~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 85 MELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp EECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EeccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 99999999999987544 489999999999999999999999 99999999999999 78889999999998765
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
.... ......++..|+|||.+.+ .++.++||||||+++|||+||+.||...... ...........
T Consensus 160 ~~~~---~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~--------- 224 (277)
T 3f3z_A 160 KPGK---MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS--EVMLKIREGTF--------- 224 (277)
T ss_dssp CTTS---CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCC---------
T ss_pred cCcc---chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhCCC---------
Confidence 3221 1122335667999998865 4999999999999999999999999754322 11111111100
Q ss_pred CCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 596 LKHFSY----DDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 596 ~~~~~~----~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
..+. ..+..+.+++.+||+.||++|||+.|+++
T Consensus 225 --~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 225 --TFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp --CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred --CCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0111 12466889999999999999999999986
No 155
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=4.5e-40 Score=343.75 Aligned_cols=246 Identities=18% Similarity=0.204 Sum_probs=194.5
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|+.. +++.||+|++...... .....+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~e~ 135 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWLVMEY 135 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred eeEEccCCCEEEEEEEEccCCeEEEEEEEcccccc-chHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--eEEEEEec
Confidence 478999999999999974 6788999988543322 2334467899999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+. |+|.+++.... ..+++.++..++.|+++||+|||++ +|+||||||+|||+++++.+||+|||+++.....
T Consensus 136 ~~-g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~--- 207 (348)
T 1u5q_A 136 CL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--- 207 (348)
T ss_dssp CS-EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB---
T ss_pred CC-CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC---
Confidence 96 68888886433 3599999999999999999999999 9999999999999999999999999998765321
Q ss_pred CCCcccccCccccCCcccc---cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 522 NPGTLGSQGAICILPSSLE---ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~---~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
....++..|+|||.+. ...++.++|||||||++|||+||+.||...... .......... .+..
T Consensus 208 ---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~--~~~~~~~~~~-------~~~~-- 273 (348)
T 1u5q_A 208 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SALYHIAQNE-------SPAL-- 273 (348)
T ss_dssp ---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSC-------CCCC--
T ss_pred ---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHhcC-------CCCC--
Confidence 1223567799999984 567999999999999999999999999654321 1111111110 0000
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLE 633 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~ 633 (658)
.+...+..+.+++.+||+.||++|||+.|+++..-
T Consensus 274 ~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~ 308 (348)
T 1u5q_A 274 QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308 (348)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHH
T ss_pred CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence 11123456889999999999999999999987643
No 156
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=9.9e-40 Score=331.94 Aligned_cols=249 Identities=15% Similarity=0.199 Sum_probs=190.8
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||.||+|+.. ++..+|+|++..... ....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv 98 (285)
T 3is5_A 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS---QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH--NMYIV 98 (285)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC---CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred eeecceeccCCCeEEEEEEEccCCceEEEEEeecccc---chhHHHHHHHHHHHHhCCCchHHhHHHheecCC--eEEEE
Confidence 445689999999999999986 577888888754432 223467899999999999999999999998877 78999
Q ss_pred EEecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee---cCCCCceeccccchh
Q 006178 439 FDYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKLVDFDSWK 513 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~ 513 (658)
|||+++|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+++
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 9999999999998642 123599999999999999999999999 99999999999999 456789999999997
Q ss_pred hhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccC
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (658)
....... .....++..|+|||.+. ..++.++||||||+++|||++|+.||......... .......... .
T Consensus 176 ~~~~~~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~--~~~~~~~~~~----~ 245 (285)
T 3is5_A 176 LFKSDEH---STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQ--QKATYKEPNY----A 245 (285)
T ss_dssp C-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHCCCCC----C
T ss_pred ecCCccc---CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHH--hhhccCCccc----c
Confidence 6543221 12233566799999875 57899999999999999999999999754422211 1111110000 0
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
..... .++.+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 246 VECRP----LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp C--CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cccCc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01111 2356789999999999999999999986
No 157
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.7e-40 Score=348.57 Aligned_cols=248 Identities=13% Similarity=0.095 Sum_probs=196.0
Q ss_pred hcccccCCCCeeEEEEE------ecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc---CCCccceeeEEecCCC
Q 006178 362 FSNIIGSSPDSLVYKGT------MKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN---HENTGKLLGYCRESSP 432 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~------~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~ 432 (658)
+.+.||+|+||.||+|. ..+++.||+|++... ...++.+|++++++++ |+||+++++++...+
T Consensus 69 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~- 140 (365)
T 3e7e_A 69 VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-------NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN- 140 (365)
T ss_dssp EEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-------CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS-
T ss_pred EEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-------ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC-
Confidence 34889999999999994 346789999987432 1346778888888886 999999999999887
Q ss_pred CceEEEEEecCCCChhhhhccC---CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC---------
Q 006178 433 FTRMLVFDYASNGTLYEHLHYG---ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE--------- 500 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~--------- 500 (658)
..++||||+++|+|.+++... ....+++..++.|+.||++||+|||++ +|+||||||+|||++.
T Consensus 141 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 141 -GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp -CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC----
T ss_pred -CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccc
Confidence 779999999999999999742 234699999999999999999999999 9999999999999998
Q ss_pred --CCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHH
Q 006178 501 --DFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWA 578 (658)
Q Consensus 501 --~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~ 578 (658)
++.+||+|||+|+.+.............++..|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~----- 291 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG----- 291 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT-----
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC-----
Confidence 8999999999997654222222222334567899999999999999999999999999999999998532110
Q ss_pred HHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCC-CCHHHHHHHHhhccCC
Q 006178 579 KDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKR-PSMQELCTMLEGRIDT 638 (658)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~R-Ps~~evl~~L~~~~~~ 638 (658)
........+..+ ..+.+.+++..|++.+|.+| |+++++.+.|++....
T Consensus 292 ----------~~~~~~~~~~~~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 292 ----------ECKPEGLFRRLP--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp ----------EEEECSCCTTCS--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ----------ceeechhccccC--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 001111122221 23556789999999999999 6889999998887654
No 158
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.9e-40 Score=336.07 Aligned_cols=243 Identities=16% Similarity=0.217 Sum_probs=191.6
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
.+.+.||+|+||.||+|++. +++.||+|.+...... .....++.+|+..+.++ +||||+++++++.+.+ ..++|
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~--~~~lv 89 (289)
T 1x8b_A 14 HELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG--SVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD--HMLIQ 89 (289)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTT--SHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT--EEEEE
T ss_pred hhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC--eEEEE
Confidence 34489999999999999987 6889999987643322 23456788999999999 9999999999998877 78999
Q ss_pred EEecCCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC---------------
Q 006178 439 FDYASNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED--------------- 501 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~--------------- 501 (658)
|||+++|+|.+++.... ...+++.++..++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 99999999999997542 13589999999999999999999999 99999999999999844
Q ss_pred ----CCceeccccchhhhhhcCCCCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHHH
Q 006178 502 ----FSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVD 576 (658)
Q Consensus 502 ----~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~ 576 (658)
..+||+|||.+....... ...++..|+|||.+.+. .+++++|||||||++|||++|.+|+.... .
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--~-- 236 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD--Q-- 236 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH--H--
T ss_pred cCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh--H--
Confidence 478999999987653221 12356779999999876 57789999999999999999998764321 1
Q ss_pred HHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 577 WAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+.. .. .......+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 237 ~~~-~~----------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 237 WHE-IR----------QGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp HHH-HH----------TTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHH-HH----------cCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 111 01 111111222334668899999999999999999998764
No 159
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.7e-40 Score=339.55 Aligned_cols=254 Identities=15% Similarity=0.138 Sum_probs=195.9
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|.+. ++..+|+|.+............+.+.+|++++++++||||+++++++...+....++||
T Consensus 8 ~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 87 (305)
T 2wtk_C 8 LMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVM 87 (305)
T ss_dssp CCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEE
T ss_pred eEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEe
Confidence 34589999999999999985 57789999886543222223456799999999999999999999998654433789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||++++ |.+++.......+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 88 e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 163 (305)
T 2wtk_C 88 EYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163 (305)
T ss_dssp ECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC
T ss_pred hhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccccCccc
Confidence 999875 87877765555799999999999999999999999 99999999999999999999999999987653222
Q ss_pred CCCCCcccccCccccCCcccccCC--CCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARH--LDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~--~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
.........++..|+|||.+.+.. ++.++||||||+++|||+||+.||.... .............
T Consensus 164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~i~~~~~----------- 230 (305)
T 2wtk_C 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN--IYKLFENIGKGSY----------- 230 (305)
T ss_dssp SSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHCCC-----------
T ss_pred cccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch--HHHHHHHHhcCCC-----------
Confidence 222222233567799999987644 4789999999999999999999997543 2222221111100
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 231 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1122234568899999999999999999999975
No 160
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.3e-41 Score=348.97 Aligned_cols=259 Identities=19% Similarity=0.240 Sum_probs=183.0
Q ss_pred hhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHh--ccCCCccceeeEEecCCCC--ceE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLAR--INHENTGKLLGYCRESSPF--TRM 436 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~~~--~~~ 436 (658)
.+.+.||+|+||.||+|++. ++.||||.+... ....+.+|.+++.. ++||||+++++++.+.... ..+
T Consensus 6 ~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 6 VLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp CCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T-------THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred eehhhccCCCCeEEEEEEEc-CcceEEEEeccc-------chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 34589999999999999875 789999987422 23457788888887 7999999999999876532 579
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhh--------hcCCCCeeeccCCCcceeecCCCCceecc
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH--------TELGPPFTISELNSSAVYLTEDFSPKLVD 508 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH--------~~~~~~ivHrDlkp~NILl~~~~~~kl~D 508 (658)
+||||+++|+|.+++... .+++..+..++.|++.||+||| +. +|+||||||+|||++.++.+||+|
T Consensus 78 lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~D 151 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEECCTTCCHHHHHHHC---CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCC
T ss_pred EEEeccCCCCHHHHHhcc---CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEee
Confidence 999999999999999754 4788999999999999999999 77 999999999999999999999999
Q ss_pred ccchhhhhhcCCCC--CCcccccCccccCCcccccC------CCCccccchhhHHHHHHHHhC----------CCCCCCC
Q 006178 509 FDSWKTILARSEKN--PGTLGSQGAICILPSSLEAR------HLDVQGNIYAFGVLLLEIISG----------RPPCCKD 570 (658)
Q Consensus 509 FGla~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~------~~~~ksDVwS~Gvvl~elltG----------~~p~~~~ 570 (658)
||+++......... ......++..|+|||.+.+. .++.++|||||||++|||+|| +.||...
T Consensus 152 Fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~ 231 (303)
T 3gxj_A 152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 231 (303)
T ss_dssp CCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTT
T ss_pred cCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccccc
Confidence 99987654322211 11222456779999998776 445789999999999999999 6666432
Q ss_pred CC---cHHHHHHHhhcCCcccccccCCcCCC--CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 571 KG---NLVDWAKDYLELPEVMSYVVDPELKH--FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 571 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
.. .......... .....+.... .....+..+.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 232 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 232 VPSDPSVEEMRKVVC------EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CC-CCCCC-CHHHHT------TSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred CCCCccHHHHHHHHH------HhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 11 0000000000 0011111111 12366778999999999999999999999999999987654
No 161
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.4e-40 Score=338.92 Aligned_cols=259 Identities=19% Similarity=0.190 Sum_probs=194.3
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 82 (311)
T 4agu_A 7 KIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESED--DPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR--RLHLVFE 82 (311)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred EeeEEeecCCeEEEEEEeCCCCcEEEEEEeecccc--chHHHHHHHHHHHHHHhCCCCCccchhheeecCC--eEEEEEE
Confidence 3488999999999999986 478899998754332 2334567889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~~~~~l~~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 83 YCDHTVLHELDRYQR--GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp CCSEEHHHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred eCCCchHHHHHhhhc--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 999999999887543 489999999999999999999999 999999999999999999999999999876543222
Q ss_pred CCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHH-HHHHHhhcC-----------Ccc
Q 006178 521 KNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV-DWAKDYLEL-----------PEV 587 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~-~~~~~~~~~-----------~~~ 587 (658)
.. ....++..|+|||.+.+ ..++.++||||||+++|||+||+.||........ ......... ...
T Consensus 158 ~~--~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 158 YY--DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred cc--CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccc
Confidence 11 12234567999999876 6789999999999999999999999976542211 111111100 000
Q ss_pred cccccCCcCCCC------CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 588 MSYVVDPELKHF------SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 588 ~~~~~~~~~~~~------~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
......+..... .+..+..+.+++.+||+.||++|||++|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000000000000 01234568899999999999999999999875
No 162
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.2e-40 Score=332.74 Aligned_cols=248 Identities=19% Similarity=0.232 Sum_probs=179.3
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.||+|.+...... .....+.+.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus 15 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 91 (278)
T 3cok_A 15 VGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMY-KAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN--YVYLVLE 91 (278)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred eeeeecCCCceEEEEEEEccCCceEEEEEeehhhhh-hhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC--eEEEEEe
Confidence 3488999999999999974 6788999988543211 1223467899999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++........
T Consensus 92 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 167 (278)
T 3cok_A 92 MCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167 (278)
T ss_dssp CCTTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred cCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence 999999999998543 3689999999999999999999999 999999999999999999999999999876532221
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
.. ....++..|+|||.+.+..++.++||||||+++|||+||+.||........ . ........ ..+
T Consensus 168 ~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~----------~~~~~~~~-~~~ 232 (278)
T 3cok_A 168 KH--YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT--L----------NKVVLADY-EMP 232 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------------CCSSCC-CCC
T ss_pred cc--eeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH--H----------HHHhhccc-CCc
Confidence 11 122345679999999998999999999999999999999999965432110 0 00111111 122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+..+.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 233 SFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 2334678899999999999999999998863
No 163
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3.2e-40 Score=347.30 Aligned_cols=247 Identities=20% Similarity=0.190 Sum_probs=187.0
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHH-HHhccCCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVAD-LARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.||+|+||.||+|+.+. +..+|+|.+...... .....+.+.+|..+ ++.++||||+++++++.+.+ ..|+||
T Consensus 42 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~-~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~--~~~lv~ 118 (373)
T 2r5t_A 42 FLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAIL-KKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD--KLYFVL 118 (373)
T ss_dssp EEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC--------------CCBCCCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC--EEEEEE
Confidence 45899999999999999874 677888888544322 22233456777776 56789999999999999887 889999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 119 E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 119 DYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence 9999999999997544 489999999999999999999999 99999999999999999999999999998643222
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.. .....++..|+|||++.+..++.++|||||||++|||++|+.||..... .+.......... .+
T Consensus 194 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~i~~~~~-----------~~ 258 (373)
T 2r5t_A 194 ST--TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--AEMYDNILNKPL-----------QL 258 (373)
T ss_dssp CC--CCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH--HHHHHHHHHSCC-----------CC
T ss_pred Cc--cccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHHhccc-----------CC
Confidence 21 2223456779999999999999999999999999999999999975432 222222222111 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+++.+||+.||++||++.+.++.
T Consensus 259 ~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ 290 (373)
T 2r5t_A 259 KPNITNSARHLLEGLLQKDRTKRLGAKDDFME 290 (373)
T ss_dssp CSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHH
T ss_pred CCCCCHHHHHHHHHHcccCHHhCCCCCCCHHH
Confidence 12234568899999999999999998644433
No 164
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.9e-40 Score=361.38 Aligned_cols=249 Identities=18% Similarity=0.146 Sum_probs=200.6
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|++. +|+.||+|++...... .......+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~-~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~--~l~lVmEy 265 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD--ALCLVLTL 265 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhh-hhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC--EEEEEEEc
Confidence 389999999999999986 6889999988543311 1223456889999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++|+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+....
T Consensus 266 ~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~-- 340 (576)
T 2acx_A 266 MNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-- 340 (576)
T ss_dssp CCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC--
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccCc--
Confidence 9999999999876555699999999999999999999999 99999999999999999999999999997653221
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC--cHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG--NLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
......++..|+|||++.+..++.++|||||||++|||++|+.||..... ............+. .+
T Consensus 341 -~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~-----------~~ 408 (576)
T 2acx_A 341 -TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPE-----------EY 408 (576)
T ss_dssp -CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCC-----------CC
T ss_pred -cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccc-----------cC
Confidence 11223456779999999998999999999999999999999999976432 12222222111111 12
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRP-----SMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 631 (658)
+...+..+.+|+.+||+.||++|| +++||+++
T Consensus 409 p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 409 SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 223346688999999999999999 78888754
No 165
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=3.2e-40 Score=340.96 Aligned_cols=261 Identities=18% Similarity=0.232 Sum_probs=198.2
Q ss_pred hhcccccCCCCeeEEEEEe-cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecC--CCCceEE
Q 006178 361 DFSNIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES--SPFTRML 437 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~-~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~~~l 437 (658)
.+.+.||+|+||.||+++. .+++.||+|++.... ....+.+.+|++++++++||||+++++++... .....++
T Consensus 32 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 32 LFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE----QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp EEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS----HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred EEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC----HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 3458999999999999998 468899999885432 23456789999999999999999999998732 1226799
Q ss_pred EEEecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 438 VFDYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
||||+++|+|.+++... ....+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 99999999999998752 234699999999999999999999999 9999999999999999999999999987654
Q ss_pred hhcCCCCC-------CcccccCccccCCcccccCC---CCccccchhhHHHHHHHHhCCCCCCC---CCCcHHHHHHHhh
Q 006178 516 LARSEKNP-------GTLGSQGAICILPSSLEARH---LDVQGNIYAFGVLLLEIISGRPPCCK---DKGNLVDWAKDYL 582 (658)
Q Consensus 516 ~~~~~~~~-------~~~~~~~~~~~aPE~~~~~~---~~~ksDVwS~Gvvl~elltG~~p~~~---~~~~~~~~~~~~~ 582 (658)
........ .....++..|+|||.+.+.. ++.++||||||+++|||++|+.||.. .............
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 264 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQL 264 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC-
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccC
Confidence 21111000 01112356799999987654 68999999999999999999999842 1111111111100
Q ss_pred cCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCch
Q 006178 583 ELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 641 (658)
.. ..+...+..+.+++.+||+.||.+|||+.|+++.|+.+....+.
T Consensus 265 ---------~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~ 310 (317)
T 2buj_A 265 ---------SI----PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310 (317)
T ss_dssp ----------C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC
T ss_pred ---------CC----CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCC
Confidence 00 11122346688999999999999999999999999998765544
No 166
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.3e-39 Score=333.40 Aligned_cols=261 Identities=19% Similarity=0.242 Sum_probs=196.8
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|... +++.||+|++..... ......+.+.+|+.++++++||||+++++++.+.+ ..++||
T Consensus 35 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 111 (310)
T 2wqm_A 35 RIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDL-MDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN--ELNIVL 111 (310)
T ss_dssp EEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSS-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred EEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhc-cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--cEEEEE
Confidence 34589999999999999974 688999998854322 22344567899999999999999999999999877 789999
Q ss_pred EecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 440 DYASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 440 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||+++|+|.+++... ....+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||+++....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 999999999998641 234589999999999999999999999 999999999999999999999999999876543
Q ss_pred cCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC
Q 006178 518 RSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK 597 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (658)
..... ....++..|+|||.+.+..++.++||||||+++|||++|+.||.................. ... .
T Consensus 189 ~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~-----~- 258 (310)
T 2wqm_A 189 KTTAA--HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD--YPP-----L- 258 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTC--SCC-----C-
T ss_pred CCccc--cccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhccc--CCC-----C-
Confidence 22211 1223456799999999999999999999999999999999999765544443333222110 000 0
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 598 HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 598 ~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
.....+..+.+++.+||+.||++|||+.||++.|+++...
T Consensus 259 -~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~ 298 (310)
T 2wqm_A 259 -PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHAC 298 (310)
T ss_dssp -CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 0112345688999999999999999999999999988653
No 167
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.6e-40 Score=342.10 Aligned_cols=266 Identities=18% Similarity=0.258 Sum_probs=197.6
Q ss_pred HHHhhhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc--cCCCccceeeEEecCCC--
Q 006178 357 VACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI--NHENTGKLLGYCRESSP-- 432 (658)
Q Consensus 357 ~~~~~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l--~H~nIv~l~~~~~~~~~-- 432 (658)
...+.+.+.||+|+||.||+|++. ++.||+|++.... ...+.+|.+++... +||||+++++++.+...
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 36 AKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE-------EASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG-------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc-------cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 334455699999999999999986 7899999874321 23455666666655 99999999999987631
Q ss_pred CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCeeeccCCCcceeecCCCCceec
Q 006178 433 FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-----GPPFTISELNSSAVYLTEDFSPKLV 507 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-----~~~ivHrDlkp~NILl~~~~~~kl~ 507 (658)
...++||||+++|+|.++++.. .+++..+..++.|++.||+|||+++ .++|+||||||+|||++.++.+||+
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~ 184 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA 184 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred CceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence 2689999999999999999754 4899999999999999999999752 3489999999999999999999999
Q ss_pred cccchhhhhhcCCCCC--CcccccCccccCCcccccCCCCcc------ccchhhHHHHHHHHhC----------CCCCCC
Q 006178 508 DFDSWKTILARSEKNP--GTLGSQGAICILPSSLEARHLDVQ------GNIYAFGVLLLEIISG----------RPPCCK 569 (658)
Q Consensus 508 DFGla~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~k------sDVwS~Gvvl~elltG----------~~p~~~ 569 (658)
|||+++.+........ .....++..|+|||.+.+...+.+ +|||||||++|||+|| +.||..
T Consensus 185 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~ 264 (337)
T 3mdy_A 185 DLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD 264 (337)
T ss_dssp CCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhh
Confidence 9999876543222111 112245677999999987776665 9999999999999999 666643
Q ss_pred CC---CcHHHHHHHhhcCCcccccccCCcCCC--CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 570 DK---GNLVDWAKDYLELPEVMSYVVDPELKH--FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 570 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
.. ...... ...... ....+.... .+..++..+.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 265 ~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 265 LVPSDPSYEDM-REIVCI-----KKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp TSCSSCCHHHH-HHHHTT-----SCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred hcCCCCchhhh-HHHHhh-----hccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 21 111111 111111 001111111 12367788999999999999999999999999999987643
No 168
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=7.9e-40 Score=334.25 Aligned_cols=247 Identities=14% Similarity=0.169 Sum_probs=197.2
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
..+.||+|+||.||+|++.+ ++.+|+|.+.... .......+.+.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 95 (294)
T 2rku_A 19 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSL-LLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVLE 95 (294)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-CCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEEEEeecCCEEEEEEEECCCCceEEEEEechhh-ccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC--EEEEEEe
Confidence 34899999999999999874 5677777764332 223344567899999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.... .+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 96 ~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 96 LCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp CCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred cCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 999999999987543 489999999999999999999999 999999999999999999999999999876532221
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
. .....++..|+|||.+.+..++.++||||||+++|||+||+.||...... +.......... ..+
T Consensus 171 ~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~-----------~~~ 235 (294)
T 2rku_A 171 R--KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--ETYLRIKKNEY-----------SIP 235 (294)
T ss_dssp C--BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHTTCC-----------CCC
T ss_pred c--cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhhccC-----------CCc
Confidence 1 12233456799999999989999999999999999999999999654321 11111111100 112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+..+.+++.+||+.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 236 KHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 2233568899999999999999999999875
No 169
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3.6e-39 Score=328.68 Aligned_cols=248 Identities=20% Similarity=0.211 Sum_probs=191.9
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecC--CCCceEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES--SPFTRMLV 438 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~~~lv 438 (658)
+.+.||+|+||.||+|.+. ++..||+|.+..... .....+.+.+|+.++++++||||+++++++... +....++|
T Consensus 30 ~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL--TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred eeeeccCCCCeEEEEeEecCCceEEEEEEecchhh--CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 3478999999999999986 466788887754332 234456799999999999999999999998653 22257999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeeccCCCcceeec-CCCCceeccccchhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLT-EDFSPKLVDFDSWKTI 515 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDlkp~NILl~-~~~~~kl~DFGla~~~ 515 (658)
|||+++|+|.+++.... .+++..+..++.|++.||+|||++ + |+||||||+||+++ +++.+||+|||++...
T Consensus 108 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 108 TELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEecCCCCHHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 99999999999997543 489999999999999999999998 7 99999999999998 7889999999998653
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
... ......++..|+|||.+. +.++.++||||||+++|||+||+.||...... ........... .....
T Consensus 183 ~~~----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~--~~~~~--- 251 (290)
T 1t4h_A 183 RAS----FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA-AQIYRRVTSGV--KPASF--- 251 (290)
T ss_dssp CTT----SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-HHHHHHHTTTC--CCGGG---
T ss_pred ccc----ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH-HHHHHHHhccC--Ccccc---
Confidence 221 122233566799999876 46999999999999999999999999654332 22222211110 00001
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 252 ----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 252 ----DKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ----GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ----CCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 11122568899999999999999999999863
No 170
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.2e-39 Score=349.53 Aligned_cols=251 Identities=16% Similarity=0.172 Sum_probs=187.0
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeecccc----chhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCc
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW----TGYLELYFQREVADLARINHENTGKLLGYCRESSPFT 434 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 434 (658)
+.+.+.||+|+||.||+|.+. +++.||+|.+..+.... .......+.+|++++++++||||+++++++... .
T Consensus 137 y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~---~ 213 (419)
T 3i6u_A 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE---D 213 (419)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS---E
T ss_pred EEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC---c
Confidence 344589999999999999976 56889999886543111 111223578999999999999999999998654 4
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC---CCceeccccc
Q 006178 435 RMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED---FSPKLVDFDS 511 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGl 511 (658)
.++||||+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+
T Consensus 214 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DFG~ 288 (419)
T 3i6u_A 214 YYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH 288 (419)
T ss_dssp EEEEEECCTTCBGGGGTSSSC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred eEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeeccc
Confidence 689999999999999987554 499999999999999999999999 99999999999999754 4599999999
Q ss_pred hhhhhhcCCCCCCcccccCccccCCccccc---CCCCccccchhhHHHHHHHHhCCCCCCCCCC--cHHHHHHHhhcCCc
Q 006178 512 WKTILARSEKNPGTLGSQGAICILPSSLEA---RHLDVQGNIYAFGVLLLEIISGRPPCCKDKG--NLVDWAKDYLELPE 586 (658)
Q Consensus 512 a~~~~~~~~~~~~~~~~~~~~~~aPE~~~~---~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~--~~~~~~~~~~~~~~ 586 (658)
++...... ......++..|+|||++.+ ..++.++|||||||++|||+||+.||..... ........... .
T Consensus 289 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~--~ 363 (419)
T 3i6u_A 289 SKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY--N 363 (419)
T ss_dssp TTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCC--C
T ss_pred ceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCC--C
Confidence 98753221 1122335677999999853 6788999999999999999999999975432 22221111000 0
Q ss_pred ccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 587 VMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
... . .....+..+.+++.+||+.||++|||+.|+++.
T Consensus 364 ~~~----~----~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 364 FIP----E----VWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp CCH----H----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCc----h----hhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 000 0 001124668899999999999999999999874
No 171
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=6.9e-40 Score=341.10 Aligned_cols=247 Identities=14% Similarity=0.166 Sum_probs=197.1
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
..+.||+|+||.||++++.+ ++.+|+|.+.... .......+.+.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus 45 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 121 (335)
T 2owb_A 45 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSL-LLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVLE 121 (335)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-CCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEechhh-hcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--eEEEEEe
Confidence 34889999999999999875 5677777764332 223345567899999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.... .+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 122 ~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 196 (335)
T 2owb_A 122 LCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196 (335)
T ss_dssp CCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred cCCCCCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence 999999999987543 489999999999999999999999 999999999999999999999999999876532221
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFS 600 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (658)
. .....++..|+|||.+.+..++.++||||||+++|||+||+.||..... ............ ..+
T Consensus 197 ~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~-----------~~~ 261 (335)
T 2owb_A 197 R--KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL--KETYLRIKKNEY-----------SIP 261 (335)
T ss_dssp C--BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHHTCC-----------CCC
T ss_pred c--ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH--HHHHHHHhcCCC-----------CCC
Confidence 1 1223345679999999999999999999999999999999999965432 111111111100 111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 601 YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 601 ~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...+..+.+++.+||+.||++|||+.|+++.
T Consensus 262 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 262 KHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 2233567899999999999999999999874
No 172
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=6.9e-40 Score=356.11 Aligned_cols=263 Identities=15% Similarity=0.126 Sum_probs=181.7
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC---CCceE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---PFTRM 436 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~---~~~~~ 436 (658)
.+.+.||+|+||.||+|++. +++.||+|++.... ......+++.+|++++++++|||||++++++.... ....|
T Consensus 56 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 133 (458)
T 3rp9_A 56 EIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF--EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELY 133 (458)
T ss_dssp EECCC-------CEEEEEECC--CEEEEEEECSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred EEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh--cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEE
Confidence 34589999999999999976 67889999885332 22334567899999999999999999999985432 12689
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+ +|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+...
T Consensus 134 lv~e~~-~~~L~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 134 VVLEIA-DSDFKKLFRTPV--YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp EEECCC-SEEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred EEEecc-ccchhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 999998 579999997553 499999999999999999999999 99999999999999999999999999998764
Q ss_pred hcCCCC-------------------------CCcccccCccccCCccc-ccCCCCccccchhhHHHHHHHHh--------
Q 006178 517 ARSEKN-------------------------PGTLGSQGAICILPSSL-EARHLDVQGNIYAFGVLLLEIIS-------- 562 (658)
Q Consensus 517 ~~~~~~-------------------------~~~~~~~~~~~~aPE~~-~~~~~~~ksDVwS~Gvvl~ellt-------- 562 (658)
...... ......++..|+|||++ ....++.++|||||||++|||+|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~ 287 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAY 287 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSS
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccc
Confidence 221110 11122346679999986 45679999999999999999999
Q ss_pred ---CCCCCCCCCC---------------------cHHHHHHHhhcCCcc-----------------cccccCCcCCCCCH
Q 006178 563 ---GRPPCCKDKG---------------------NLVDWAKDYLELPEV-----------------MSYVVDPELKHFSY 601 (658)
Q Consensus 563 ---G~~p~~~~~~---------------------~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~ 601 (658)
|+++|.+... +....+......+.. ........+....+
T Consensus 288 ~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (458)
T 3rp9_A 288 HADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFP 367 (458)
T ss_dssp GGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGST
T ss_pred cccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCC
Confidence 5666643221 000000000100000 00000000001112
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+..+.+|+.+||+.||++|||++|+++.
T Consensus 368 ~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 368 ASSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 235678899999999999999999999986
No 173
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=4.3e-40 Score=334.40 Aligned_cols=246 Identities=16% Similarity=0.201 Sum_probs=196.9
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|+.. ++..+|+|.+...... .....+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 17 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 93 (284)
T 2vgo_A 17 DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLE-KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK--RIYLML 93 (284)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred eeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccc-hHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC--EEEEEE
Confidence 34589999999999999987 4667888887543211 1223467899999999999999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~- 167 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL- 167 (284)
T ss_dssp CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSS-
T ss_pred EeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccc-
Confidence 9999999999997654 489999999999999999999999 9999999999999999999999999988654321
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
......++..|+|||.+.+..++.++||||||+++|||++|+.||...... .......... ..+
T Consensus 168 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~-----------~~~ 231 (284)
T 2vgo_A 168 ---RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT--ETHRRIVNVD-----------LKF 231 (284)
T ss_dssp ---CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHTTC-----------CCC
T ss_pred ---ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh--HHHHHHhccc-----------cCC
Confidence 112223466799999999999999999999999999999999999654321 1111111110 012
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+++.+||+.||.+|||+.|+++.
T Consensus 232 ~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 232 PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 22334668899999999999999999999863
No 174
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.9e-40 Score=357.58 Aligned_cols=247 Identities=18% Similarity=0.141 Sum_probs=188.7
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.||+|.+...... .......+.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus 152 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~--~~~lv~e 228 (446)
T 4ejn_A 152 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV-AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD--RLCFVME 228 (446)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC--------------CCCCCSCTTSCCEEEEEEETT--EEEEEEC
T ss_pred EeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhh-hhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC--EEEEEEe
Confidence 3489999999999999976 5788999988543211 1223456789999999999999999999999887 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
|+++|+|.+++.... .+++..+..++.||+.||+|||+ . +|+||||||+|||++.++.+||+|||+|+......
T Consensus 229 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 229 YANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp CCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred eCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 999999999997544 48999999999999999999998 7 99999999999999999999999999987543222
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.. .....++..|+|||++.+..++.++|||||||++|||+||+.||...... ........... .+
T Consensus 304 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i~~~~~-----------~~ 368 (446)
T 4ejn_A 304 AT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELILMEEI-----------RF 368 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCC-----------CC
T ss_pred cc--cccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HHHHHHHhCCC-----------CC
Confidence 11 12234567799999999999999999999999999999999999654322 12121111111 12
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRP-----SMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~ 631 (658)
+...+..+.+|+.+||+.||++|| +++|+++.
T Consensus 369 p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 369 PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 223346688999999999999999 99999863
No 175
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=344.21 Aligned_cols=272 Identities=20% Similarity=0.266 Sum_probs=193.7
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHH--HHhccCCCccceeeEEec---CCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAD--LARINHENTGKLLGYCRE---SSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~--l~~l~H~nIv~l~~~~~~---~~~~~~~ 436 (658)
+.+.||+|+||.||+|+. +++.||+|++.... ...+..|.++ +..++||||+++++++.. .+....+
T Consensus 17 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 88 (336)
T 3g2f_A 17 LLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN-------RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL 88 (336)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG-------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred eeeecccCCCeEEEEEEE-CCeEEEEEEeeccc-------hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence 348999999999999987 56899999884322 2234445444 445899999999986542 2222568
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC------CCCeeeccCCCcceeecCCCCceecccc
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL------GPPFTISELNSSAVYLTEDFSPKLVDFD 510 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~------~~~ivHrDlkp~NILl~~~~~~kl~DFG 510 (658)
+||||+++|+|.+++.... .++..+..++.||++||+|||+.+ .++|+||||||+|||++.++.+||+|||
T Consensus 89 lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 89 LVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp EEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred EEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 9999999999999997553 589999999999999999999863 3389999999999999999999999999
Q ss_pred chhhhhhcCC------CCCCcccccCccccCCccccc-------CCCCccccchhhHHHHHHHHhCCCCCCCCCC-----
Q 006178 511 SWKTILARSE------KNPGTLGSQGAICILPSSLEA-------RHLDVQGNIYAFGVLLLEIISGRPPCCKDKG----- 572 (658)
Q Consensus 511 la~~~~~~~~------~~~~~~~~~~~~~~aPE~~~~-------~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~----- 572 (658)
+++.+..... ........++..|+|||.+.+ ..++.++|||||||++|||+||..||.....
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 245 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQ 245 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCC
T ss_pred ceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHH
Confidence 9986543211 111112335678999999876 4567899999999999999999777643211
Q ss_pred -----------cHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCch
Q 006178 573 -----------NLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSIS 641 (658)
Q Consensus 573 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 641 (658)
....+ ........ ...... .........+..+.+++.+||+.||++|||+.|+++.|++++.....
T Consensus 246 ~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~ 322 (336)
T 3g2f_A 246 MAFQTEVGNHPTFEDM-QVLVSREK-QRPKFP-EAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWER 322 (336)
T ss_dssp CTTHHHHCSSCCHHHH-HHHHTTSC-CCCCCC-TTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC
T ss_pred HhhhcccCCCchHHHH-Hhhhcccc-cCCCCC-cccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHh
Confidence 00000 00000000 000001 11112334677899999999999999999999999999999987766
Q ss_pred hhhccc
Q 006178 642 VELKAS 647 (658)
Q Consensus 642 ~~~~~~ 647 (658)
...+.+
T Consensus 323 ~~~~~~ 328 (336)
T 3g2f_A 323 NKSVSP 328 (336)
T ss_dssp ------
T ss_pred cccCCC
Confidence 555443
No 176
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-39 Score=342.65 Aligned_cols=260 Identities=16% Similarity=0.155 Sum_probs=191.6
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC----CceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----~~~~ 436 (658)
+.+.||+|+||.||+|++. +|+.||+|++.... ......+++.+|++++++++||||+++++++...+. ...+
T Consensus 29 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 106 (367)
T 1cm8_A 29 DLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF--QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFY 106 (367)
T ss_dssp EEEEC------CEEEEEETTTCCEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCE
T ss_pred EeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc--cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEE
Confidence 3478999999999999985 68899999884432 223345678999999999999999999999976531 1459
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+ +++|.+++... .+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 107 lv~e~~-~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 107 LVMPFM-GTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp EEEECC-SEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 999999 78999999753 489999999999999999999999 99999999999999999999999999987643
Q ss_pred hcCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCC-cc------
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELP-EV------ 587 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~-~~------ 587 (658)
.. .....++..|+|||.+.+ ..++.++||||+||++|||++|+.||...... ....+......+ ..
T Consensus 180 ~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~ 254 (367)
T 1cm8_A 180 SE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQ 254 (367)
T ss_dssp SS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCS
T ss_pred cc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhh
Confidence 21 122234667999999887 67999999999999999999999999754321 111111111000 00
Q ss_pred ----------cccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--Hhhc
Q 006178 588 ----------MSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM--LEGR 635 (658)
Q Consensus 588 ----------~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~--L~~~ 635 (658)
........+.......+..+.+|+.+||+.||++|||+.|+++. +++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~ 314 (367)
T 1cm8_A 255 SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL 314 (367)
T ss_dssp CHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred hHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhh
Confidence 00000111111222345678899999999999999999999985 4443
No 177
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=4.1e-39 Score=330.62 Aligned_cols=248 Identities=17% Similarity=0.196 Sum_probs=195.3
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||.||+|+.. +++.||+|.+..... ...+.+.+|+.++++++||||+++++++.+.+ ..++|
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 84 (304)
T 2jam_A 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA----FRDSSLENEIAVLKKIKHENIVTLEDIYESTT--HYYLV 84 (304)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC----------HHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred ceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc----cchHHHHHHHHHHHhCCCCCeeehhhhcccCC--EEEEE
Confidence 445589999999999999986 678899998864322 12346889999999999999999999998877 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee---cCCCCceeccccchhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~ 515 (658)
|||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||++ ++++.+||+|||+++..
T Consensus 85 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 85 MQLVSGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp ECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred EEcCCCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 99999999999987543 489999999999999999999999 99999999999999 78889999999988653
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
.. .......++..|+|||.+.+..++.++||||||+++|||+||+.||...... ............ ...
T Consensus 160 ~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~---~~~-- 228 (304)
T 2jam_A 160 QN----GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES--KLFEKIKEGYYE---FES-- 228 (304)
T ss_dssp CC----BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHCCCC---CCT--
T ss_pred CC----CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHcCCCC---CCc--
Confidence 21 1112233567799999999999999999999999999999999999654321 111111111000 001
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
......+..+.+++.+||+.||++|||+.|+++.
T Consensus 229 --~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 229 --PFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp --TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred --cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1112234668899999999999999999999874
No 178
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-40 Score=347.15 Aligned_cols=252 Identities=17% Similarity=0.170 Sum_probs=196.2
Q ss_pred hcccccCCCCeeEEEEEe----cCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceE
Q 006178 362 FSNIIGSSPDSLVYKGTM----KGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~----~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 436 (658)
+.+.||+|+||.||+|+. .+++.||+|++............+.+.+|+++++++ +||||+++++++...+ ..+
T Consensus 58 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~~~ 135 (355)
T 1vzo_A 58 LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET--KLH 135 (355)
T ss_dssp EEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT--EEE
T ss_pred EEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc--eEE
Confidence 458999999999999997 368899999886443221222334577899999999 6999999999998877 789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++|+|.+++.... .+++..+..++.||++||+|||++ +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 136 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 136 LILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp EEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred EEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 9999999999999997544 489999999999999999999999 99999999999999999999999999987653
Q ss_pred hcCCCCCCcccccCccccCCccccc--CCCCccccchhhHHHHHHHHhCCCCCCCCC--CcHHHHHHHhhcCCccccccc
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEA--RHLDVQGNIYAFGVLLLEIISGRPPCCKDK--GNLVDWAKDYLELPEVMSYVV 592 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~ksDVwS~Gvvl~elltG~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~ 592 (658)
..... ......++..|+|||.+.+ ..++.++|||||||++|||+||+.||.... ..............
T Consensus 211 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~------- 282 (355)
T 1vzo_A 211 ADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE------- 282 (355)
T ss_dssp GGGGG-GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCC-------
T ss_pred cCCCC-cccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccC-------
Confidence 22111 1112235677999999985 347899999999999999999999996433 22333322222111
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHH
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRP-----SMQELCTML 632 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RP-----s~~evl~~L 632 (658)
..++...+..+.+++.+||+.||++|| +++|+++..
T Consensus 283 ----~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 283 ----PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ----CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 112223346688999999999999999 899998764
No 179
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1e-39 Score=334.24 Aligned_cols=258 Identities=17% Similarity=0.174 Sum_probs=194.8
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|+.. +++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 83 (299)
T 2r3i_A 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET--EGVPSTAIREISLLKELNHPNIVKLLDVIHTEN--KLYLVFEF 83 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEC----------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred hhhhccCCCeeEEEEEEcCCCceEEEEEeecCccc--hhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCC--ceEEEEEc
Confidence 478999999999999986 6788999987543321 223356889999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
++ |+|.+++.......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.........
T Consensus 84 ~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 159 (299)
T 2r3i_A 84 LH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159 (299)
T ss_dssp CS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred cc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccc
Confidence 97 6999999876555699999999999999999999999 9999999999999999999999999999876432221
Q ss_pred CCCcccccCccccCCcccccCC-CCccccchhhHHHHHHHHhCCCCCCCCCCcH--HHHHHHhhcCCccc-cc-----cc
Q 006178 522 NPGTLGSQGAICILPSSLEARH-LDVQGNIYAFGVLLLEIISGRPPCCKDKGNL--VDWAKDYLELPEVM-SY-----VV 592 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~-~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~--~~~~~~~~~~~~~~-~~-----~~ 592 (658)
. ....++..|+|||.+.+.. ++.++||||||+++|||+||+.||....... .............. .. ..
T Consensus 160 ~--~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (299)
T 2r3i_A 160 Y--THEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237 (299)
T ss_dssp T--TSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred c--CcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCccc
Confidence 1 2223456799999998765 7999999999999999999999997654221 11111111110000 00 00
Q ss_pred CCcCCC--------CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 593 DPELKH--------FSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 593 ~~~~~~--------~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.+.... .....+..+.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred chhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 001100 01123467889999999999999999999987
No 180
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=7.3e-40 Score=342.02 Aligned_cols=266 Identities=19% Similarity=0.227 Sum_probs=204.2
Q ss_pred HHHHHHHhhhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHh--ccCCCccceeeEEecC
Q 006178 353 QELEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLAR--INHENTGKLLGYCRES 430 (658)
Q Consensus 353 ~~l~~~~~~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~ 430 (658)
.+.....+.+.+.||+|+||.||+|++ +++.||+|.+... ..+.+.+|++++.. ++||||+++++++...
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred cccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-------hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 344444555669999999999999998 4789999987422 23467889999888 6999999999999876
Q ss_pred CC--CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhh--------hcCCCCeeeccCCCcceeecC
Q 006178 431 SP--FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH--------TELGPPFTISELNSSAVYLTE 500 (658)
Q Consensus 431 ~~--~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH--------~~~~~~ivHrDlkp~NILl~~ 500 (658)
.. ...++||||+++|+|.+++... .+++.++..++.|++.||+||| +. +|+||||||+||+++.
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~ 182 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKK 182 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECT
T ss_pred CCccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECC
Confidence 42 1579999999999999999754 4899999999999999999999 77 9999999999999999
Q ss_pred CCCceeccccchhhhhhcCCCC--CCcccccCccccCCcccccC------CCCccccchhhHHHHHHHHhC---------
Q 006178 501 DFSPKLVDFDSWKTILARSEKN--PGTLGSQGAICILPSSLEAR------HLDVQGNIYAFGVLLLEIISG--------- 563 (658)
Q Consensus 501 ~~~~kl~DFGla~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~------~~~~ksDVwS~Gvvl~elltG--------- 563 (658)
++.+||+|||+++......... ......++..|+|||.+.+. .++.++|||||||++|||+||
T Consensus 183 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~ 262 (342)
T 1b6c_B 183 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED 262 (342)
T ss_dssp TSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred CCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccc
Confidence 9999999999987654322110 11223456779999998765 334789999999999999999
Q ss_pred -CCCCCCCC---CcHHHHHHHhhcCCcccccccCCcCCC--CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 564 -RPPCCKDK---GNLVDWAKDYLELPEVMSYVVDPELKH--FSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 564 -~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
+.||.... .....+....... ...+.... ...+.+..+.+++.+||+.||++|||+.||++.|+++.+
T Consensus 263 ~~~p~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~ 336 (342)
T 1b6c_B 263 YQLPYYDLVPSDPSVEEMRKVVCEQ------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 336 (342)
T ss_dssp CCCTTTTTSCSSCCHHHHHHHHTTS------CCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cccCccccCcCcccHHHHHHHHHHH------HhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 77885432 1223332222111 11111111 123667789999999999999999999999999999875
Q ss_pred C
Q 006178 638 T 638 (658)
Q Consensus 638 ~ 638 (658)
.
T Consensus 337 ~ 337 (342)
T 1b6c_B 337 Q 337 (342)
T ss_dssp T
T ss_pred H
Confidence 4
No 181
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1e-38 Score=336.03 Aligned_cols=250 Identities=19% Similarity=0.262 Sum_probs=195.3
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeecccc----chhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW----TGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 436 (658)
.+.||+|+||.||+|++. +|+.||||.+....... .....+.+.+|+.+++++ +||||+++++++.... ..+
T Consensus 99 ~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~~ 176 (365)
T 2y7j_A 99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS--FMF 176 (365)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS--EEE
T ss_pred ceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC--EEE
Confidence 389999999999999986 68899999886543211 122345688999999999 8999999999998877 789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+|||++..+.
T Consensus 177 lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~ 251 (365)
T 2y7j_A 177 LVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLE 251 (365)
T ss_dssp EEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCcccccC
Confidence 9999999999999997543 499999999999999999999999 99999999999999999999999999987654
Q ss_pred hcCCCCCCcccccCccccCCccccc------CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccccc
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEA------RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSY 590 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~------~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 590 (658)
... ......++..|+|||++.+ ..++.++|||||||++|||+||+.||...... ..............
T Consensus 252 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~--~~~~~i~~~~~~~~- 325 (365)
T 2y7j_A 252 PGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI--LMLRMIMEGQYQFS- 325 (365)
T ss_dssp TTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCCCC-
T ss_pred CCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhCCCCCC-
Confidence 321 1122345677999999863 35889999999999999999999999654321 11111111100000
Q ss_pred ccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 591 VVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.+... ..+..+.+++.+||+.||++|||+.|+++.
T Consensus 326 --~~~~~----~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 326 --SPEWD----DRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp --HHHHS----SSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred --Ccccc----cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00001 123568899999999999999999999863
No 182
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=8.1e-40 Score=339.70 Aligned_cols=257 Identities=18% Similarity=0.145 Sum_probs=186.8
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 113 (329)
T 3gbz_A 38 RITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE--EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNH--RLHLIFE 113 (329)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC----------CHHHHHHGGGCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred EEEEEEecCCeEEEEEEECCCCceEEEEEEccccc--ccccchhHHHHHHHHHHcCCCCcceEEEEEecCC--EEEEEEe
Confidence 3489999999999999976 677899998754332 2223456789999999999999999999999887 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec-----CCCCceeccccchhhh
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-----EDFSPKLVDFDSWKTI 515 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~-----~~~~~kl~DFGla~~~ 515 (658)
|++ |+|.+++.... .+++..+..|+.||+.||+|||++ +|+||||||+|||++ +++.+||+|||+++.+
T Consensus 114 ~~~-~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~ 187 (329)
T 3gbz_A 114 YAE-NDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187 (329)
T ss_dssp CCS-EEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred cCC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence 997 59999998654 489999999999999999999999 999999999999994 4556999999999876
Q ss_pred hhcCCCCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHH-HHHHHhhcCCc--ccccc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV-DWAKDYLELPE--VMSYV 591 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~-~~~~~~~~~~~--~~~~~ 591 (658)
....... ....++..|+|||.+.+. .++.++|||||||++|||++|+.||........ .........+. .....
T Consensus 188 ~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (329)
T 3gbz_A 188 GIPIRQF--THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGV 265 (329)
T ss_dssp C-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTG
T ss_pred CCccccc--CCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhh
Confidence 4322221 222346679999999874 489999999999999999999999975442211 11111111100 00000
Q ss_pred c--------CCcCCCCC------HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 592 V--------DPELKHFS------YDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 592 ~--------~~~~~~~~------~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
. .+...... ...+..+.+|+.+||+.||++|||+.|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 266 TALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp GGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0 00001111 113467889999999999999999999986
No 183
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.4e-39 Score=342.51 Aligned_cols=257 Identities=18% Similarity=0.225 Sum_probs=196.8
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. ++..+|+|.+.... .....+.+.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus 37 ~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 111 (360)
T 3eqc_A 37 KISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISICME 111 (360)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC---CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT--EEEEEEC
T ss_pred eeeeecCCCCeEEEEEEECCCCcEEEEEEecccc---CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC--EEEEEEE
Confidence 3488999999999999987 56788888775432 2334567899999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++|+|.+++.... .+++..+..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 112 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 187 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 187 (360)
T ss_dssp CCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC-
T ss_pred CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccccc
Confidence 999999999997654 4899999999999999999999831 799999999999999999999999999987643321
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCc--------------
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPE-------------- 586 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~-------------- 586 (658)
....++..|+|||.+.+..++.++|||||||++|||+||+.||...................
T Consensus 188 ----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T 3eqc_A 188 ----NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 263 (360)
T ss_dssp -------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------
T ss_pred ----cCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCc
Confidence 12234567999999999999999999999999999999999997544322211110000000
Q ss_pred ----------------ccccccCCcCCCC-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 587 ----------------VMSYVVDPELKHF-SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 587 ----------------~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
............. ....+..+.+|+.+||+.||++|||+.|+++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 264 LNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ----------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0000000000001 11234568899999999999999999999874
No 184
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.8e-39 Score=355.34 Aligned_cols=248 Identities=19% Similarity=0.144 Sum_probs=198.3
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
+.||+|+||.||+|++. +|+.||+|++...... .....+.+.+|++++++++||||+++++++.+.+ ..++||||+
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~-~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~--~l~lVmE~~ 267 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK-KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT--DLCLVMTIM 267 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECCC
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhh-hhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC--EEEEEEEec
Confidence 78999999999999986 5889999988543321 1223457889999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 443 SNGTLYEHLHYGE--RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 443 ~~gsL~~~l~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
++|+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+.....
T Consensus 268 ~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~ 344 (543)
T 3c4z_A 268 NGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344 (543)
T ss_dssp TTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred cCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc
Confidence 9999999987543 34699999999999999999999999 999999999999999999999999999986543221
Q ss_pred CCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC--cHHHHHHHhhcCCcccccccCCcCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG--NLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
. .....++..|+|||++.+..++.++|||||||++|||+||+.||..... .............. .
T Consensus 345 ~--~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~-----------~ 411 (543)
T 3c4z_A 345 K--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAV-----------T 411 (543)
T ss_dssp C--BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCC-----------C
T ss_pred c--cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhccc-----------C
Confidence 1 1122456779999999999999999999999999999999999975432 22222222222111 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSM-----QELCT 630 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~-----~evl~ 630 (658)
++...+..+.+++.+||+.||++||++ +||++
T Consensus 412 ~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 412 YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp CCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred CCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 223344678899999999999999975 56653
No 185
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-39 Score=339.32 Aligned_cols=262 Identities=18% Similarity=0.137 Sum_probs=193.7
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccc-cchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-WTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
.+.+.||+|+||.||+|++. +++.||+|++...... ......+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 13 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 90 (346)
T 1ua2_A 13 EKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS--NISLV 90 (346)
T ss_dssp CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT--CCEEE
T ss_pred EEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC--ceEEE
Confidence 34589999999999999986 5788999988543321 11122346889999999999999999999998877 67999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||+++ +|.+++.... ..+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 91 ~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 91 FDFMET-DLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp EECCSE-EHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred EEcCCC-CHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 999975 8999887543 3589999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCc--HHHHHHHhhcC-CcccccccC-
Q 006178 519 SEKNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGN--LVDWAKDYLEL-PEVMSYVVD- 593 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~--~~~~~~~~~~~-~~~~~~~~~- 593 (658)
... .....++..|+|||.+.+. .++.++|||||||++|||++|.+||...... +.......... .........
T Consensus 166 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 243 (346)
T 1ua2_A 166 NRA--YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSL 243 (346)
T ss_dssp CCC--CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSS
T ss_pred ccc--CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccC
Confidence 222 2223346779999998764 5899999999999999999999998754421 11111111110 000000000
Q ss_pred ------CcCCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 594 ------PELKHFS-----YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 594 ------~~~~~~~-----~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
......+ ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 244 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0001111 2234678999999999999999999999976
No 186
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=6.6e-39 Score=350.87 Aligned_cols=250 Identities=18% Similarity=0.211 Sum_probs=196.1
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||.||+|++. +++.||+|++...... ......+.+|++++++++||||+++++++.+.. ..++|
T Consensus 24 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv 99 (486)
T 3mwu_A 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK--NKDTSTILREVELLKKLDHPNIMKLFEILEDSS--SFYIV 99 (486)
T ss_dssp EEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB--CSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred eEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc--chHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC--EEEEE
Confidence 455689999999999999986 6788999988543321 123467899999999999999999999999877 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec---CCCCceeccccchhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT---EDFSPKLVDFDSWKTI 515 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~---~~~~~kl~DFGla~~~ 515 (658)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++ .++.+||+|||+++.+
T Consensus 100 ~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp ECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred EEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 99999999999987554 499999999999999999999999 999999999999995 4567999999999765
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
.... ......+++.|+|||++.+ .++.++||||+||++|||++|+.||...... ............. ..+.
T Consensus 175 ~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~~---~~~~ 245 (486)
T 3mwu_A 175 QQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILKRVETGKYAF---DLPQ 245 (486)
T ss_dssp CCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCCS---CSGG
T ss_pred CCCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCCC---CCcc
Confidence 3221 1122335677999999875 5999999999999999999999999754321 2222211110000 0011
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 246 ~----~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 246 W----RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp G----GGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred c----CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1 1234568899999999999999999999985
No 187
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3.6e-39 Score=347.25 Aligned_cols=199 Identities=16% Similarity=0.135 Sum_probs=160.0
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC---CceE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---FTRM 436 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~---~~~~ 436 (658)
.+.+.||+|+||.||+|++. +++.||+|++.... ......+++.+|++++++++||||+++++++..... ...|
T Consensus 29 ~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 106 (432)
T 3n9x_A 29 IIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF--EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELY 106 (432)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT--TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred EEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh--cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEE
Confidence 34589999999999999986 46789999885322 223345678999999999999999999999976531 2689
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+. |+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+|+...
T Consensus 107 lv~e~~~-~~L~~~~~~~~--~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 107 IVLEIAD-SDLKKLFKTPI--FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180 (432)
T ss_dssp EEEECCS-EEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred EEEecCC-cCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence 9999996 59999998653 499999999999999999999999 99999999999999999999999999998764
Q ss_pred hcCCC--------------------CCCcccccCccccCCccc-ccCCCCccccchhhHHHHHHHHhCCCCC
Q 006178 517 ARSEK--------------------NPGTLGSQGAICILPSSL-EARHLDVQGNIYAFGVLLLEIISGRPPC 567 (658)
Q Consensus 517 ~~~~~--------------------~~~~~~~~~~~~~aPE~~-~~~~~~~ksDVwS~Gvvl~elltG~~p~ 567 (658)
..... .......++..|+|||.+ ....++.++||||+||++|||++|..||
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp ------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred ccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 32211 011233456779999986 5567999999999999999999865444
No 188
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.8e-39 Score=337.43 Aligned_cols=259 Identities=20% Similarity=0.256 Sum_probs=193.6
Q ss_pred hcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++.. ++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 29 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 104 (331)
T 4aaa_A 29 NLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD--DKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK--RWYLVFE 104 (331)
T ss_dssp EEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred eeeEEeecCCEEEEEEEECCCCceEEEEEEecCCC--chHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCC--EEEEEEe
Confidence 34899999999999999864 78899998754332 2344567889999999999999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 105 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 105 FVDHTILDDLELFPN--GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp CCSEEHHHHHHHSTT--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred cCCcchHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 999999988876444 499999999999999999999999 999999999999999999999999999976543222
Q ss_pred CCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHH--HHHHHhh----------cCCcc
Q 006178 521 KNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV--DWAKDYL----------ELPEV 587 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~--~~~~~~~----------~~~~~ 587 (658)
.. ....++..|+|||.+.+. .++.++|||||||++|||+||+.||........ ....... .....
T Consensus 180 ~~--~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
T 4aaa_A 180 VY--DDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPV 257 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred cc--CCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccc
Confidence 21 122345679999999875 789999999999999999999999976542211 1110000 00000
Q ss_pred cccccCCcCCC-C-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 588 MSYVVDPELKH-F-----SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 588 ~~~~~~~~~~~-~-----~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
......+.... . .+..++.+.+|+.+||+.||++|||+.|+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 11111111111 1 11235678999999999999999999998864
No 189
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.8e-40 Score=335.91 Aligned_cols=261 Identities=20% Similarity=0.241 Sum_probs=192.2
Q ss_pred hhcccccCCCCeeEEEEEec--CCC--eEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK--GGP--EIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~--~~~--~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
.+.+.||+|+||.||+|++. +++ .||+|.+...... .....+.+.+|++++++++||||+++++++.+.. .+
T Consensus 21 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---~~ 96 (291)
T 1u46_A 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS-QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP---MK 96 (291)
T ss_dssp EEEEECC----CCCEEEEEECTTSCEEEEEEEC---------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS---CE
T ss_pred eeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC---ce
Confidence 34589999999999999864 233 5788877543221 2334567999999999999999999999998754 58
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++|+|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 97 ~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 9999999999999997543 2589999999999999999999999 99999999999999999999999999987654
Q ss_pred hcCCCC-CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 517 ARSEKN-PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 517 ~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
...... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||...... ............
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~------- 243 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS--QILHKIDKEGER------- 243 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTSCCC-------
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH--HHHHHHHccCCC-------
Confidence 322111 1112223456999999998889999999999999999999 99999754322 222222111110
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCc
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSI 640 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 640 (658)
...+...+..+.+++.+||+.||++|||+.++++.|+++.....
T Consensus 244 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 287 (291)
T 1u46_A 244 --LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDM 287 (291)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred --CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccch
Confidence 01122344678899999999999999999999999998876443
No 190
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=342.36 Aligned_cols=258 Identities=18% Similarity=0.199 Sum_probs=190.0
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|+.. +++.||+|++...... .....+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 6 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 80 (324)
T 3mtl_A 6 KLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE---GAPCTAIREVSLLKDLKHANIVTLHDIIHTEK--SLTLVFE 80 (324)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECC---------CCCCCCCHHHHSCCCCTTBCCEEEEEECSS--CEEEEEE
T ss_pred EEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc---ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCC--EEEEEec
Confidence 3478999999999999986 6788999988543221 11123557999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|++ |+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~~-~~l~~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 155 (324)
T 3mtl_A 81 YLD-KDLKQYLDDCGN-IINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 155 (324)
T ss_dssp CCS-EEHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-----
T ss_pred ccc-cCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCcc
Confidence 997 599999876543 589999999999999999999999 999999999999999999999999999875432221
Q ss_pred CCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCC--cccccccC---
Q 006178 521 KNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELP--EVMSYVVD--- 593 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~--~~~~~~~~--- 593 (658)
.. ....++..|+|||.+.+ ..++.++|||||||++|||+||+.||...... ....+......+ ........
T Consensus 156 ~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 156 TY--DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 233 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred cc--ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchh
Confidence 11 12234667999999876 56899999999999999999999999765422 122222221111 11111100
Q ss_pred ------CcCCC-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 594 ------PELKH-----FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 594 ------~~~~~-----~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+.... .....+..+.+|+.+||+.||++|||++|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00000 011234568899999999999999999999874
No 191
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=7.8e-40 Score=338.31 Aligned_cols=256 Identities=19% Similarity=0.314 Sum_probs=192.1
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.+.||+|+||.||+|++.+ .+|+|++...... ....+.+.+|+.++++++||||+++++++.+.+ ..++||||
T Consensus 37 ~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~iv~e~ 110 (319)
T 2y4i_B 37 IGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDN--EDQLKAFKREVMAYRQTRHENVVLFMGACMSPP--HLAIITSL 110 (319)
T ss_dssp CCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCC--CCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS--CEEEECBC
T ss_pred EeeEeccCCceEEEEEEEcC--eEEEEEeecCCCC--HHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--ceEEEeec
Confidence 45899999999999999864 5899887544322 122345778999999999999999999999877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC-
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE- 520 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~- 520 (658)
+++++|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+||+++ ++.+||+|||+++.......
T Consensus 111 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 111 CKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp CCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred ccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 99999999997643 3589999999999999999999999 999999999999998 67999999999876432111
Q ss_pred --CCCCcccccCccccCCccccc---------CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccc
Q 006178 521 --KNPGTLGSQGAICILPSSLEA---------RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS 589 (658)
Q Consensus 521 --~~~~~~~~~~~~~~aPE~~~~---------~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 589 (658)
........++..|+|||.+.. ..++.++||||||+++|||+||+.||.........+ ..... .
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~--~~~~~--~-- 259 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIW--QMGTG--M-- 259 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHH--HHHTT--C--
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HhccC--C--
Confidence 111222334567999999864 457899999999999999999999997554322221 11111 0
Q ss_pred cccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 590 YVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
.+... ....+..+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 260 ---~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 260 ---KPNLS--QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp ---CCCCC--CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred ---CCCCC--cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 00000 0012245789999999999999999999999999988654
No 192
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2e-39 Score=332.71 Aligned_cols=245 Identities=21% Similarity=0.281 Sum_probs=196.8
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||.||+|+.. +++.||+|.+..... ....+.+.+|+.++++++||||+++++++.+.. ..++||||
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~ 101 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT--KLWIIMEY 101 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC---STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred hhhhcccCCeEEEEEEECCCCcEEEEEEeccccc---HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC--eEEEEEEe
Confidence 478999999999999975 577899988754332 223567899999999999999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCC
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEK 521 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~ 521 (658)
+++++|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.........
T Consensus 102 ~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 175 (303)
T 3a7i_A 102 LGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 175 (303)
T ss_dssp CTTEEHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCC
T ss_pred CCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccccc
Confidence 9999999999743 589999999999999999999999 9999999999999999999999999998765432211
Q ss_pred CCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCH
Q 006178 522 NPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSY 601 (658)
Q Consensus 522 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (658)
.....++..|+|||.+.+..++.++||||||+++|||+||+.||........ ........ .+ ..+.
T Consensus 176 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~-------~~---~~~~ 241 (303)
T 3a7i_A 176 --RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV--LFLIPKNN-------PP---TLEG 241 (303)
T ss_dssp --BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHHHHHSC-------CC---CCCS
T ss_pred --cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHH--HHHhhcCC-------CC---CCcc
Confidence 1222345679999999999999999999999999999999999965432211 11111100 01 1112
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 006178 602 DDLKVICEVVNLCVNPDITKRPSMQELCTML 632 (658)
Q Consensus 602 ~~~~~~~~li~~cl~~dP~~RPs~~evl~~L 632 (658)
..+..+.+++.+||+.||++|||+.|+++..
T Consensus 242 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 242 NYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp SCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred ccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 2335688999999999999999999999864
No 193
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3e-39 Score=345.37 Aligned_cols=258 Identities=17% Similarity=0.170 Sum_probs=178.7
Q ss_pred ccccCCCCeeEEEEEec---CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 364 NIIGSSPDSLVYKGTMK---GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~---~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
++||+|+||.||+|++. ++..||+|++..... .+.+.+|++++++++||||+++++++........++|||
T Consensus 27 ~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e 100 (405)
T 3rgf_A 27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI------SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 100 (405)
T ss_dssp CCCC-----EEEEEEESSSSCCCCEEEEECSSSSC------CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEE
T ss_pred cEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC------CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEe
Confidence 68999999999999976 467899998843221 246789999999999999999999996544447899999
Q ss_pred ecCCCChhhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee----cCCCCceeccc
Q 006178 441 YASNGTLYEHLHYG-------ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL----TEDFSPKLVDF 509 (658)
Q Consensus 441 ~~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl----~~~~~~kl~DF 509 (658)
|+. |+|.+++... ....+++..++.|+.||+.||+|||++ +|+||||||+|||+ +.++.+||+||
T Consensus 101 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 176 (405)
T 3rgf_A 101 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 176 (405)
T ss_dssp CCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCT
T ss_pred CCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEEC
Confidence 996 5888887521 122499999999999999999999999 99999999999999 67789999999
Q ss_pred cchhhhhhcCCC-CCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCc----------HHHH
Q 006178 510 DSWKTILARSEK-NPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGN----------LVDW 577 (658)
Q Consensus 510 Gla~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~----------~~~~ 577 (658)
|+|+.+...... .......++..|+|||.+.+. .++.++|||||||++|||+||+.||...... ....
T Consensus 177 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~ 256 (405)
T 3rgf_A 177 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 256 (405)
T ss_dssp TCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHH
T ss_pred CCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHH
Confidence 999876432211 111223456779999999874 5899999999999999999999999654321 1111
Q ss_pred HHHhhcCCc--cccccc-------------CCcCCCCCH---------HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 578 AKDYLELPE--VMSYVV-------------DPELKHFSY---------DDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 578 ~~~~~~~~~--~~~~~~-------------~~~~~~~~~---------~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+......+. ....+. ......... .....+.+|+.+||+.||++|||++|+++.
T Consensus 257 i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 257 IFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 111111100 000000 000000000 013467899999999999999999999985
No 194
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=339.86 Aligned_cols=255 Identities=17% Similarity=0.203 Sum_probs=182.3
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecC------CC
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRES------SP 432 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~------~~ 432 (658)
.+.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+.+++++. ||||+++++++... ..
T Consensus 31 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 31 RVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE----EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp EEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS----HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred EEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc----hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 34589999999999999975 67889999884432 233457889999999995 99999999998421 12
Q ss_pred CceEEEEEecCCCChhhhhccC-CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eeeccCCCcceeecCCCCceeccc
Q 006178 433 FTRMLVFDYASNGTLYEHLHYG-ERCQVSWTRRMKIVIGIARGLKYLHTELGPP--FTISELNSSAVYLTEDFSPKLVDF 509 (658)
Q Consensus 433 ~~~~lv~E~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--ivHrDlkp~NILl~~~~~~kl~DF 509 (658)
...++||||+. |+|.+++... ....+++.+++.++.||+.||+|||++ + |+||||||+|||++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecC
Confidence 25799999995 7999988641 223599999999999999999999998 7 999999999999999999999999
Q ss_pred cchhhhhhcCCCC----------CCcccccCccccCCccc---ccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHH
Q 006178 510 DSWKTILARSEKN----------PGTLGSQGAICILPSSL---EARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVD 576 (658)
Q Consensus 510 Gla~~~~~~~~~~----------~~~~~~~~~~~~aPE~~---~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~ 576 (658)
|+++......... ......++..|+|||.+ .+..++.++|||||||++|||+||+.||...... .
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~ 260 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL--R 260 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH--H
Confidence 9988654322111 01122345679999998 5677899999999999999999999999643211 1
Q ss_pred HHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCC
Q 006178 577 WAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDT 638 (658)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 638 (658)
........ + .....+..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 261 ~~~~~~~~---------~----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~ 309 (337)
T 3ll6_A 261 IVNGKYSI---------P----PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA 309 (337)
T ss_dssp -----CCC---------C----TTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhcCcccC---------C----cccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 11100000 0 0111123477999999999999999999999999988653
No 195
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=329.78 Aligned_cols=247 Identities=17% Similarity=0.210 Sum_probs=192.2
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
..||+|+||.||+|++. ++..||+|.+.... ....+.+.+|+.++++++||||+++++++.+.+ ..++||||+
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~ 101 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD----SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENG--FIKIFMEQV 101 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCC----C---HHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEECC
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCc----hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCC--cEEEEEEeC
Confidence 48999999999999975 57789999875432 223457899999999999999999999998877 789999999
Q ss_pred CCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC-CCCceeccccchhhhhhcCC
Q 006178 443 SNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-DFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 443 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla~~~~~~~~ 520 (658)
++++|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||+++.......
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 9999999997543 33578999999999999999999999 9999999999999997 89999999999876532211
Q ss_pred CCCCcccccCccccCCcccccCC--CCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARH--LDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~--~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
. .....++..|+|||.+.+.. ++.++||||||+++|||+||+.||................. .. ..
T Consensus 179 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-------~~---~~ 246 (295)
T 2clq_A 179 C--TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK-------VH---PE 246 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHC-------CC---CC
T ss_pred c--ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccc-------cc---cc
Confidence 1 11223456799999987643 88999999999999999999999965433222211111100 00 11
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 247 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 247 IPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 222344678899999999999999999999864
No 196
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=8.9e-39 Score=350.42 Aligned_cols=250 Identities=19% Similarity=0.216 Sum_probs=191.3
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
+.+.+.||+|+||.||+|++. ++..+|+|.+...... ......+.+|+.++++++||||+++++++.+.. ..++|
T Consensus 39 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv 114 (494)
T 3lij_A 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS--TSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR--NYYLV 114 (494)
T ss_dssp EEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred eEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC--chHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEE
Confidence 445589999999999999986 5778999988644322 122457889999999999999999999999877 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC---CCceeccccchhhh
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED---FSPKLVDFDSWKTI 515 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla~~~ 515 (658)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.. +.+||+|||+++..
T Consensus 115 ~e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~ 189 (494)
T 3lij_A 115 MECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189 (494)
T ss_dssp EECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence 99999999999887553 489999999999999999999999 99999999999999764 45999999998765
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
..... .....++..|+|||++. ..++.++||||+||++|||++|+.||...... ............ ...+.
T Consensus 190 ~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~---~~~~~ 260 (494)
T 3lij_A 190 ENQKK---MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ--EILRKVEKGKYT---FDSPE 260 (494)
T ss_dssp BTTBC---BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCC---CCSGG
T ss_pred CCCcc---ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCC---CCchh
Confidence 43221 12233567799999876 57999999999999999999999999754322 222221111110 11111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. ..+..+.+++.+||+.||++|||+.|+++.
T Consensus 261 ~~----~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 261 WK----NVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp GT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred cc----cCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 11 223568899999999999999999999854
No 197
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=9.6e-40 Score=354.23 Aligned_cols=272 Identities=13% Similarity=0.148 Sum_probs=201.0
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccC-CCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH-ENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.++||+|+||.||+|++. +++.||||.+...... .++.+|+++++.++| +++..+..++.+.+ ..++||
T Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~------~~~~~E~~il~~L~~~~~i~~i~~~~~~~~--~~~lvm 82 (483)
T 3sv0_A 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH------PQLLYESKIYRILQGGTGIPNVRWFGVEGD--YNVLVM 82 (483)
T ss_dssp CCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS------CCHHHHHHHHHHTTTSTTCCCEEEEEEETT--EEEEEE
T ss_pred EEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc------HHHHHHHHHHHHhcCCCCCCeEEEEEeeCC--EEEEEE
Confidence 3489999999999999974 6788999976443321 247889999999976 45555555555555 779999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee---cCCCCceeccccchhhhh
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~ 516 (658)
||+ +++|.+++..... .+++.+++.|+.||+.||+|||++ +|+||||||+|||+ ++++.+||+|||+++.+.
T Consensus 83 e~~-g~sL~~ll~~~~~-~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp ECC-CCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred ECC-CCCHHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 999 8999999975433 599999999999999999999999 99999999999999 688999999999998765
Q ss_pred hcCCCC-----CCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCCccccc
Q 006178 517 ARSEKN-----PGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELPEVMSY 590 (658)
Q Consensus 517 ~~~~~~-----~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~ 590 (658)
...... ......++..|+|||.+.+..++.++|||||||++|||++|+.||..... ............ ....
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~--~~~~ 235 (483)
T 3sv0_A 158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK--KVAT 235 (483)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHH--HHHS
T ss_pred CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhc--cccc
Confidence 332211 11233456779999999999999999999999999999999999976432 111111111100 0000
Q ss_pred ccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCCchhhhccchhHHhhh
Q 006178 591 VVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTSISVELKASSLAWAEL 654 (658)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~l 654 (658)
... ......+.++.+++.+||+.||++||++.+|++.|+++...... ......+|..+
T Consensus 236 ~~~----~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~--~~~~~~dW~~~ 293 (483)
T 3sv0_A 236 SIE----ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGF--QFDYVFDWTIL 293 (483)
T ss_dssp CHH----HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC--CCSSCCHHHHH
T ss_pred cHH----HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCC--CccCCcCchhh
Confidence 000 00011235688999999999999999999999999988653211 12234556544
No 198
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.2e-39 Score=332.07 Aligned_cols=247 Identities=16% Similarity=0.240 Sum_probs=192.5
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|++. +++.||+|.+.... ..+.+.+|+.++++++||||+++++++.+.+ ..++||
T Consensus 32 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 103 (314)
T 3com_A 32 DVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES------DLQEIIKEISIMQQCDSPHVVKYYGSYFKNT--DLWIVM 103 (314)
T ss_dssp EEEEECC----CEEEEEEETTTCCEEEEEEEETTS------CCHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred hhheeeccCCCeEEEEEEECCCCCEEEEEecCchH------HHHHHHHHHHHHHhCCCCCCccEEEEEEeCC--EEEEEe
Confidence 34489999999999999986 47889999875432 1356889999999999999999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 104 e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (314)
T 3com_A 104 EYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM 179 (314)
T ss_dssp ECCTTEEHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred ecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence 9999999999986332 2589999999999999999999999 99999999999999999999999999987654322
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
.. .....++..|+|||.+.+..++.++||||||+++|||++|+.||.........+. ...... +.. ..
T Consensus 180 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~-------~~~-~~ 247 (314)
T 3com_A 180 AK--RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFM--IPTNPP-------PTF-RK 247 (314)
T ss_dssp SC--BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH--HHHSCC-------CCC-SS
T ss_pred cc--cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHH--HhcCCC-------ccc-CC
Confidence 11 1122345679999999999999999999999999999999999975432211111 111100 000 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 248 ~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 248 PELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 22234668899999999999999999999863
No 199
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.3e-39 Score=345.41 Aligned_cols=255 Identities=15% Similarity=0.169 Sum_probs=187.7
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC---------
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS--------- 431 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--------- 431 (658)
+.+.||+|+||.||+|++. +++.||+|++...... ..+|++++++++||||+++++++....
T Consensus 11 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~--------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 82 (383)
T 3eb0_A 11 LGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY--------KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP 82 (383)
T ss_dssp EEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS--------CCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred EEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch--------HHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence 3489999999999999974 6889999988543222 237999999999999999999985432
Q ss_pred ---------------------------CCceEEEEEecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhhcC
Q 006178 432 ---------------------------PFTRMLVFDYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTEL 482 (658)
Q Consensus 432 ---------------------------~~~~~lv~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~ 482 (658)
....++||||++ |+|.+.+.. .....+++..+..++.||++||+|||++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~- 160 (383)
T 3eb0_A 83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL- 160 (383)
T ss_dssp ---------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-
T ss_pred ccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 124789999997 588877753 2233699999999999999999999999
Q ss_pred CCCeeeccCCCcceeec-CCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHH
Q 006178 483 GPPFTISELNSSAVYLT-EDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEI 560 (658)
Q Consensus 483 ~~~ivHrDlkp~NILl~-~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~el 560 (658)
+|+||||||+|||++ +++.+||+|||+|+.+..... .....++..|+|||.+.+. .++.++||||+||++|||
T Consensus 161 --gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el 235 (383)
T 3eb0_A 161 --GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGEL 235 (383)
T ss_dssp --TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred --cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHH
Confidence 999999999999998 688999999999986533221 1222345679999998875 489999999999999999
Q ss_pred HhCCCCCCCCCCc--HHHHHHHhhcCC--------cccccccCCcCCC------CCHHHHHHHHHHHHHccCCCCCCCCC
Q 006178 561 ISGRPPCCKDKGN--LVDWAKDYLELP--------EVMSYVVDPELKH------FSYDDLKVICEVVNLCVNPDITKRPS 624 (658)
Q Consensus 561 ltG~~p~~~~~~~--~~~~~~~~~~~~--------~~~~~~~~~~~~~------~~~~~~~~~~~li~~cl~~dP~~RPs 624 (658)
++|+.||...... +...+....... .......-+.... ++...+..+.+|+.+||+.||++|||
T Consensus 236 l~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t 315 (383)
T 3eb0_A 236 ILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRIN 315 (383)
T ss_dssp HHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCC
T ss_pred HhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCC
Confidence 9999999764321 111111110000 0000001111111 12234567889999999999999999
Q ss_pred HHHHHHH
Q 006178 625 MQELCTM 631 (658)
Q Consensus 625 ~~evl~~ 631 (658)
+.|+++.
T Consensus 316 ~~e~l~h 322 (383)
T 3eb0_A 316 PYEAMAH 322 (383)
T ss_dssp HHHHHTS
T ss_pred HHHHhcC
Confidence 9999853
No 200
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=3.2e-39 Score=338.43 Aligned_cols=264 Identities=17% Similarity=0.210 Sum_probs=194.7
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC------CC
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS------PF 433 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~ 433 (658)
.+.+.||+|+||.||+|++. +++.||+|++...... ......+.+|++++++++||||+++++++.... ..
T Consensus 20 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 97 (351)
T 3mi9_A 20 EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKG 97 (351)
T ss_dssp EEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCS--SSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------C
T ss_pred eEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccccc--ccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCc
Confidence 34589999999999999985 6789999988554322 223456789999999999999999999997643 12
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchh
Q 006178 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 434 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
..++||||+++ +|.+.+..... .+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 98 ~~~lv~e~~~~-~l~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 98 SIYLVFDFCEH-DLAGLLSNVLV-KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp EEEEEEECCSE-EHHHHHHCTTS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred eEEEEEeccCC-CHHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 57999999975 88888765433 599999999999999999999999 99999999999999999999999999998
Q ss_pred hhhhcCCC--CCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcH-HHHHHHhhc-CC-cc
Q 006178 514 TILARSEK--NPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-VDWAKDYLE-LP-EV 587 (658)
Q Consensus 514 ~~~~~~~~--~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-~~~~~~~~~-~~-~~ 587 (658)
.+...... .......++..|+|||.+.+ ..++.++|||||||++|||+||+.||....... ...+..... .+ ..
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 252 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 252 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhh
Confidence 65422211 11122334677999999876 458999999999999999999999997654321 111111111 10 00
Q ss_pred cccccC-----------CcCCCCCHH-----HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 588 MSYVVD-----------PELKHFSYD-----DLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 588 ~~~~~~-----------~~~~~~~~~-----~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...... ......... ....+.+|+.+||+.||++|||+.|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 253 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp STTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 000000 000000011 13458899999999999999999999985
No 201
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=6.1e-39 Score=344.84 Aligned_cols=195 Identities=18% Similarity=0.173 Sum_probs=165.4
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc------cCCCccceeeEEecCCCC
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI------NHENTGKLLGYCRESSPF 433 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l------~H~nIv~l~~~~~~~~~~ 433 (658)
.+.+.||+|+||.||+|++. +++.||||++... ....+.+.+|+++++.+ +|+||+++++++...+
T Consensus 100 ~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~-- 172 (429)
T 3kvw_A 100 EVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN-- 172 (429)
T ss_dssp EEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT--
T ss_pred EEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC--
Confidence 34589999999999999976 4778999887432 22345677898888887 5679999999999877
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC--ceeccccc
Q 006178 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS--PKLVDFDS 511 (658)
Q Consensus 434 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~--~kl~DFGl 511 (658)
..++||||+. ++|.+++.......+++..+..|+.||+.||+|||++ +|+||||||+|||++.++. +||+|||+
T Consensus 173 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 173 HICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp EEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred eEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeeccc
Confidence 7899999995 6999999876655699999999999999999999999 9999999999999999887 99999999
Q ss_pred hhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCC
Q 006178 512 WKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDK 571 (658)
Q Consensus 512 a~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~ 571 (658)
++..... .....++..|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 249 a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 249 SCYEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp CEETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ceecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 8654321 122334667999999999999999999999999999999999997654
No 202
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.7e-39 Score=340.57 Aligned_cols=273 Identities=14% Similarity=0.118 Sum_probs=197.3
Q ss_pred cHHHHHHHHhhhc--ccccCCCCeeEEEEEecCCCeEEEEEEeeecccc-------chhhHHHHHHHHHHHHhccCCCcc
Q 006178 351 SRQELEVACEDFS--NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW-------TGYLELYFQREVADLARINHENTG 421 (658)
Q Consensus 351 ~~~~l~~~~~~f~--~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~-------~~~~~~~~~~E~~~l~~l~H~nIv 421 (658)
...++......|. +.||+|+||.||+|...++..||+|++....... .....+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 3455666556665 8999999999999999889999999986543221 122336799999999999999999
Q ss_pred ceeeEEecCC---CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee
Q 006178 422 KLLGYCRESS---PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL 498 (658)
Q Consensus 422 ~l~~~~~~~~---~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl 498 (658)
++++++...+ ....++||||++ |+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+||++
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILL 167 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEE
Confidence 9999985432 225799999997 69999887543 3699999999999999999999999 99999999999999
Q ss_pred cCCCCceeccccchhhhhhcCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHH
Q 006178 499 TEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVD 576 (658)
Q Consensus 499 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~ 576 (658)
+.++.+||+|||+++....... .....++..|+|||.+.+ ..++.++|||||||++|||+||+.||...... ...
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~ 244 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTADAN---KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN 244 (362)
T ss_dssp CTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred cCCCCEEEEecCcccccccccc---cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 9999999999999975432211 122234566999999877 67999999999999999999999999754321 111
Q ss_pred HHHHhhcCCcc----------cccccCCcCCC--------CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 577 WAKDYLELPEV----------MSYVVDPELKH--------FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 577 ~~~~~~~~~~~----------~~~~~~~~~~~--------~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
........+.. ........... .....+..+.+++.+||+.||++|||+.|+++.
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 11111111000 00000000100 112234568899999999999999999999975
No 203
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3e-39 Score=338.19 Aligned_cols=259 Identities=10% Similarity=0.086 Sum_probs=198.6
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccch-------------hhHHHHHHHHHHHHhccCCCccceeeEEe
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTG-------------YLELYFQREVADLARINHENTGKLLGYCR 428 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~-------------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 428 (658)
+.+.||+|+||.||+|+. +++.||+|.+......... ...+.+.+|++++++++||||+++++++.
T Consensus 35 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 113 (348)
T 2pml_X 35 IIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIIT 113 (348)
T ss_dssp EEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEE
T ss_pred EEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 458999999999999999 8899999998654321110 11167999999999999999999999999
Q ss_pred cCCCCceEEEEEecCCCChhhh------hccCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeeccCCCcceeecCC
Q 006178 429 ESSPFTRMLVFDYASNGTLYEH------LHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTED 501 (658)
Q Consensus 429 ~~~~~~~~lv~E~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~ 501 (658)
+.+ ..++||||+++|+|.++ +.......+++..+..++.|++.||+|||+ + +|+||||||+||+++.+
T Consensus 114 ~~~--~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~~~~ 188 (348)
T 2pml_X 114 NYD--EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILMDKN 188 (348)
T ss_dssp SSS--EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEECTT
T ss_pred eCC--eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEEcCC
Confidence 887 78999999999999999 665435579999999999999999999999 8 99999999999999999
Q ss_pred CCceeccccchhhhhhcCCCCCCcccccCccccCCcccccC-CCCc-cccchhhHHHHHHHHhCCCCCCCCCCcHHHHHH
Q 006178 502 FSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEAR-HLDV-QGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAK 579 (658)
Q Consensus 502 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~-ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~ 579 (658)
+.+||+|||++...... ......++..|+|||.+.+. .++. ++||||||+++|||+||+.||....... ....
T Consensus 189 ~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~ 263 (348)
T 2pml_X 189 GRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV-ELFN 263 (348)
T ss_dssp SCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH-HHHH
T ss_pred CcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHH
Confidence 99999999998765322 11223345679999999887 6766 9999999999999999999997554322 1222
Q ss_pred HhhcCCccccc----ccCCcC----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 580 DYLELPEVMSY----VVDPEL----KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 580 ~~~~~~~~~~~----~~~~~~----~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
........... ...+.. .......+..+.+++.+||+.||++|||+.|+++.
T Consensus 264 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 264 NIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 22111111100 000000 00113345678899999999999999999999873
No 204
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=4.2e-39 Score=331.98 Aligned_cols=249 Identities=15% Similarity=0.201 Sum_probs=191.1
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc--CCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN--HENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.||+|+||.||+|+..+++.+|+|++..... .....+.+.+|++++++++ ||||+++++++.+.+ ..++||
T Consensus 32 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv~ 107 (313)
T 3cek_A 32 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMVM 107 (313)
T ss_dssp EEEEEECCSSEEEEEEECTTCCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEecCCCCEEEEEEEcCCCcEEEEEEeccccc--cccchHHHHHHHHHHHhccccCCceEEEEEEeecCC--EEEEEE
Confidence 3489999999999999998899999998855432 2334567899999999996 599999999998877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
| +.+++|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||++++ +.+||+|||+++.+....
T Consensus 108 e-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~ 180 (313)
T 3cek_A 108 E-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDT 180 (313)
T ss_dssp C-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC-----
T ss_pred e-cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccCcc
Confidence 9 45789999998654 589999999999999999999999 9999999999999975 789999999998764332
Q ss_pred CCCCCcccccCccccCCccccc-----------CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccc
Q 006178 520 EKNPGTLGSQGAICILPSSLEA-----------RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVM 588 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~-----------~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 588 (658)
.........++..|+|||.+.+ ..++.++||||||+++|||+||+.||.......... .........
T Consensus 181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~- 258 (313)
T 3cek_A 181 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL-HAIIDPNHE- 258 (313)
T ss_dssp ---------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH-HHHHCTTSC-
T ss_pred ccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHH-HHHHhcccc-
Confidence 2222223345677999999875 478899999999999999999999997544332222 111111000
Q ss_pred ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. .++...+..+.+++.+||+.||++|||+.|+++.
T Consensus 259 -----~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 259 -----I---EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp -----C---CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -----c---CCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 0 1111223568899999999999999999999875
No 205
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.5e-40 Score=339.58 Aligned_cols=248 Identities=19% Similarity=0.276 Sum_probs=189.4
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCC----CCceE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESS----PFTRM 436 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~----~~~~~ 436 (658)
.+.||+|+||.||+|++. +++.||+|.+..... ..+.+.+|+.+++++ +||||+++++++.... ....+
T Consensus 29 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~ 103 (326)
T 2x7f_A 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-----EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW 103 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-----TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEE
T ss_pred EEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-----cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEE
Confidence 489999999999999985 678899998754322 235788999999999 8999999999997632 22689
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+++|+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 180 (326)
T 2x7f_A 104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180 (326)
T ss_dssp EEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC---
T ss_pred EEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCceecC
Confidence 999999999999999865545699999999999999999999999 99999999999999999999999999987654
Q ss_pred hcCCCCCCcccccCccccCCcccc-----cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccc
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLE-----ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYV 591 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (658)
..... .....++..|+|||.+. +..++.++|||||||++|||+||+.||.........+ ...... ....
T Consensus 181 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~--~~~~ 254 (326)
T 2x7f_A 181 RTVGR--RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF--LIPRNP--APRL 254 (326)
T ss_dssp ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH--HHHHSC--CCCC
T ss_pred cCccc--cccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH--HhhcCc--cccC
Confidence 32211 11223456799999987 5678999999999999999999999996543221111 111110 0000
Q ss_pred cCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 592 VDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. ....+..+.+++.+||+.||++|||+.|+++.
T Consensus 255 ~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 255 K-------SKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp S-------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred C-------ccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 11223568899999999999999999999874
No 206
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=8e-39 Score=332.44 Aligned_cols=252 Identities=14% Similarity=0.130 Sum_probs=192.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCceEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.+.||+|+||.||+|++. +++.||+|.+... ..+.+.+|++++++++ ||||+++++++.+......++||
T Consensus 40 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 40 LVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred EEEEecccCCeEEEEEEECCCCcEEEEEEeccc-------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 4489999999999999974 6788999887422 1356889999999996 99999999999875444789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC-Cceeccccchhhhhhc
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF-SPKLVDFDSWKTILAR 518 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~~~~ 518 (658)
||+++++|.+++. .+++.++..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||+++.....
T Consensus 113 e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp ECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred eccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 9999999999985 389999999999999999999999 999999999999999776 8999999999765332
Q ss_pred CCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHh--hcC-----------
Q 006178 519 SEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDY--LEL----------- 584 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~--~~~----------- 584 (658)
.. .....++..|+|||.+.+ ..++.++|||||||++|||+||+.||.............. ...
T Consensus 185 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 261 (330)
T 3nsz_A 185 QE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261 (330)
T ss_dssp CC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred Cc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhc
Confidence 21 122334567999999887 6799999999999999999999999965443222111100 000
Q ss_pred ---CcccccccCC--------cC-CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 585 ---PEVMSYVVDP--------EL-KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 585 ---~~~~~~~~~~--------~~-~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.......... .. .......+..+.+|+.+||+.||++|||++|+++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000000000 00 00112235678899999999999999999999873
No 207
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=8.6e-40 Score=335.29 Aligned_cols=258 Identities=19% Similarity=0.254 Sum_probs=179.7
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.||+|.+..... ....+++.+|+.++++++||||+++++++...+ ..++|||
T Consensus 19 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 93 (303)
T 2vwi_A 19 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC---QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD--ELWLVMK 93 (303)
T ss_dssp EEEECC---CCCEEEEEC----CEEEEECCC-------------------CCCCCCCTTBCCEEEEEESSS--CEEEEEE
T ss_pred hhheeccccceEEEEEEECCCCcEEEEEEEEhhhc---chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC--CcEEEeh
Confidence 3489999999999999975 678899998744321 123456889999999999999999999999887 7899999
Q ss_pred ecCCCChhhhhcc------CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 441 YASNGTLYEHLHY------GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 441 ~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
|+++|+|.+++.. .....+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 9999999999863 1233589999999999999999999999 999999999999999999999999999876
Q ss_pred hhhcCCCC---CCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccc-c
Q 006178 515 ILARSEKN---PGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVM-S 589 (658)
Q Consensus 515 ~~~~~~~~---~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~-~ 589 (658)
........ ......++..|+|||.+.+ ..++.++||||||+++|||+||+.||........... ......... .
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~ 249 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML-TLQNDPPSLET 249 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHH-HHTSSCCCTTC
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHH-HhccCCCcccc
Confidence 54322111 1112234567999999876 5689999999999999999999999976543222111 111111111 1
Q ss_pred cccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 590 YVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...++. .....+..+.+++.+||+.||++|||+.|+++.
T Consensus 250 ~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 250 GVQDKE---MLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp -----C---CCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccccch---hhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 111111 111233568899999999999999999999873
No 208
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.7e-39 Score=348.26 Aligned_cols=255 Identities=19% Similarity=0.231 Sum_probs=187.9
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC----CCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----~~~~~ 436 (658)
..+.||+|+||.||+|++. +++.||||++..... .+.+|++++++++|||||++++++.... ....+
T Consensus 58 ~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~--------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 58 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR--------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT--------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred eeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch--------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 3478999999999999986 588999998854322 1347999999999999999999985422 12467
Q ss_pred EEEEecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC-CCceeccccchh
Q 006178 437 LVFDYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-FSPKLVDFDSWK 513 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~ 513 (658)
+||||+++ +|.+.+.. .....+++..+..++.||++||+|||++ +|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999975 77766642 1234699999999999999999999999 99999999999999965 568999999998
Q ss_pred hhhhcCCCCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCC--cHHHHHHHhhcCC-----
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKG--NLVDWAKDYLELP----- 585 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~--~~~~~~~~~~~~~----- 585 (658)
.+..... .....++..|+|||++.+. .++.++|||||||++|||++|+.||..... .+.+.++......
T Consensus 206 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 206 QLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp ECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHH
T ss_pred hcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 6533221 1222346679999998764 799999999999999999999999976542 1222221110000
Q ss_pred ---cccccccCCcCCC------CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 586 ---EVMSYVVDPELKH------FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 586 ---~~~~~~~~~~~~~------~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.......-+.... ++...+.++.+|+.+||+.||++|||+.|+++.
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 0001111111111 112334678999999999999999999999864
No 209
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.2e-38 Score=336.53 Aligned_cols=256 Identities=17% Similarity=0.150 Sum_probs=188.4
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC----CceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----~~~~ 436 (658)
+.+.||+|+||.||+|+.. +++.||+|++..... .....+.+.+|+.++++++||||+++++++...+. ...+
T Consensus 29 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 106 (371)
T 2xrw_A 29 NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY 106 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEE
T ss_pred EeeeeEecCCEEEEEEEECCCCceEEEEEeccccC--ChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceE
Confidence 3488999999999999976 578899998854322 23345678899999999999999999999976542 2579
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||++ |+|.+++.. .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 107 lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 107 IVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178 (371)
T ss_dssp EEEECCS-EEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred EEEEcCC-CCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence 9999996 588888863 389999999999999999999999 99999999999999999999999999998653
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccc--------
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVM-------- 588 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~-------- 588 (658)
... ......++..|+|||.+.+..++.++|||||||++|||+||+.||..... ...+...........
T Consensus 179 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~ 254 (371)
T 2xrw_A 179 TSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH-IDQWNKVIEQLGTPCPEFMKKLQ 254 (371)
T ss_dssp --------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHC-CCCCCHHHHTTSC
T ss_pred ccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHHhh
Confidence 221 11223345679999999999999999999999999999999999975432 111111110000000
Q ss_pred ----------------------ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 589 ----------------------SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 589 ----------------------~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.....+.........+..+.+|+.+||+.||++|||++|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0000000000112346779999999999999999999999975
No 210
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.3e-38 Score=350.05 Aligned_cols=250 Identities=19% Similarity=0.210 Sum_probs=192.0
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeecccc---------chhhHHHHHHHHHHHHhccCCCccceeeEEecCC
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW---------TGYLELYFQREVADLARINHENTGKLLGYCRESS 431 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~---------~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 431 (658)
+.+.||+|+||.||+|++. ++..+|+|.+....... .....+.+.+|+.++++++||||+++++++.+..
T Consensus 40 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 119 (504)
T 3q5i_A 40 KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKK 119 (504)
T ss_dssp EEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred EEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 3489999999999999986 46789999886433111 0123467899999999999999999999999877
Q ss_pred CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC---Cceecc
Q 006178 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF---SPKLVD 508 (658)
Q Consensus 432 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~kl~D 508 (658)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++ .+||+|
T Consensus 120 --~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 120 --YFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp --EEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred --EEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEEEEE
Confidence 7899999999999999987544 499999999999999999999999 999999999999998775 699999
Q ss_pred ccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccc
Q 006178 509 FDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVM 588 (658)
Q Consensus 509 FGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 588 (658)
||+++.+.... ......+++.|+|||.+. +.++.++||||+||++|||++|+.||...... .............
T Consensus 193 fg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~~ 266 (504)
T 3q5i_A 193 FGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ--DIIKKVEKGKYYF 266 (504)
T ss_dssp CTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCCC
T ss_pred CCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHcCCCCC
Confidence 99997653321 112233567799999986 56999999999999999999999999754322 2222211111000
Q ss_pred ccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 589 SYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. .+... ..+..+.+++.+||+.||.+|||+.|+++.
T Consensus 267 ~---~~~~~----~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 267 D---FNDWK----NISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp C---HHHHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred C---ccccC----CCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0 00001 123568899999999999999999999864
No 211
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2e-40 Score=350.93 Aligned_cols=240 Identities=14% Similarity=0.104 Sum_probs=182.4
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHH---HHHHhccCCCcccee-------eEEecCC
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREV---ADLARINHENTGKLL-------GYCRESS 431 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~---~~l~~l~H~nIv~l~-------~~~~~~~ 431 (658)
.+.||+|+||.||+|++. +++.||||++...... .....+.+.+|+ +++++++|||||+++ +++.+.+
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 156 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 156 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-C-CTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTT
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeecccc-chHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccC
Confidence 488999999999999974 6889999998654322 233456799999 555566899999999 6665442
Q ss_pred C----------C-----ceEEEEEecCCCChhhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccC
Q 006178 432 P----------F-----TRMLVFDYASNGTLYEHLHYGER-----CQVSWTRRMKIVIGIARGLKYLHTELGPPFTISEL 491 (658)
Q Consensus 432 ~----------~-----~~~lv~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDl 491 (658)
. . ..++||||+ +|+|.+++..... ..+++..+..|+.||+.||+|||++ +|+||||
T Consensus 157 ~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDi 232 (377)
T 3byv_A 157 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 232 (377)
T ss_dssp SCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 1 0 268999999 6899999975321 1344688999999999999999999 9999999
Q ss_pred CCcceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccC-----------CCCccccchhhHHHHHHH
Q 006178 492 NSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEAR-----------HLDVQGNIYAFGVLLLEI 560 (658)
Q Consensus 492 kp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-----------~~~~ksDVwS~Gvvl~el 560 (658)
||+|||++.++.+||+|||+|+..... .....+ ..|+|||.+.+. .++.++|||||||++|||
T Consensus 233 kp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~el 306 (377)
T 3byv_A 233 RPVDIVLDQRGGVFLTGFEHLVRDGAR-----VVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWI 306 (377)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTCE-----EECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHH
T ss_pred CHHHEEEcCCCCEEEEechhheecCCc-----ccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHH
Confidence 999999999999999999998753221 111223 779999999887 899999999999999999
Q ss_pred HhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 561 ISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 561 ltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
+||+.||...... .....+.. .... .+..+.+++.+||+.||++|||+.|+++
T Consensus 307 ltg~~Pf~~~~~~------------~~~~~~~~-~~~~----~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 307 WCADLPITKDAAL------------GGSEWIFR-SCKN----IPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHSSCCC------------------CCSGGGGS-SCCC----CCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHCCCCCcccccc------------cchhhhhh-hccC----CCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9999999643210 11111111 1112 2356889999999999999999999986
No 212
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.4e-39 Score=327.39 Aligned_cols=246 Identities=16% Similarity=0.194 Sum_probs=191.3
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.||+|.+..... ......+.+.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus 15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 91 (276)
T 2h6d_A 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKI-RSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT--DFFMVME 91 (276)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEEE
T ss_pred EEeeecCCCCeEEEEEEECCCCceEEEEEeccccc-cchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--eEEEEEe
Confidence 4588999999999999986 688999998854321 11223457899999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 92 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~- 165 (276)
T 2h6d_A 92 YVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE- 165 (276)
T ss_dssp CCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred ccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCc-
Confidence 999999999997554 489999999999999999999999 99999999999999999999999999987653221
Q ss_pred CCCCcccccCccccCCcccccCCC-CccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCC
Q 006178 521 KNPGTLGSQGAICILPSSLEARHL-DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHF 599 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (658)
......++..|+|||.+.+..+ +.++||||||+++|||++|+.||..... ........... ...
T Consensus 166 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~-----------~~~ 230 (276)
T 2h6d_A 166 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV--PTLFKKIRGGV-----------FYI 230 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC-----------CCC
T ss_pred --ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH--HHHHHHhhcCc-----------ccC
Confidence 1112234567999999987765 6899999999999999999999965432 11111111110 011
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 600 SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 600 ~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 231 ~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 231 PEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred chhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 22233568899999999999999999999874
No 213
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=4.2e-39 Score=330.16 Aligned_cols=248 Identities=17% Similarity=0.189 Sum_probs=191.4
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. ++..+|+|.+..... ...+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 23 i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 96 (302)
T 2j7t_A 23 IVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE----EELEDYIVEIEILATCDHPYIVKLLGAYYHDG--KLWIMIE 96 (302)
T ss_dssp EEEEEECSTTCCEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC---CEEEEEE
T ss_pred ecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH----HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC--eEEEEEE
Confidence 3488999999999999987 477888888754322 23467889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSE 520 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~ 520 (658)
|+++++|.+++..... .+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++........
T Consensus 97 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 172 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDR-GLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ 172 (302)
T ss_dssp CCTTEEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH
T ss_pred eCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccccc
Confidence 9999999999875332 599999999999999999999999 999999999999999999999999998865432221
Q ss_pred CCCCcccccCccccCCcccc-----cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCc
Q 006178 521 KNPGTLGSQGAICILPSSLE-----ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 521 ~~~~~~~~~~~~~~aPE~~~-----~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (658)
... ...++..|+|||.+. ...++.++||||||+++|||+||+.||...... ........... +
T Consensus 173 ~~~--~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~-------~- 240 (302)
T 2j7t_A 173 KRD--SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--RVLLKIAKSDP-------P- 240 (302)
T ss_dssp C-------CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSCC-------C-
T ss_pred ccc--cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH--HHHHHHhccCC-------c-
Confidence 111 123456799999983 667899999999999999999999999754321 11111111100 0
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
....+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 241 TLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp CCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred ccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 001122334668899999999999999999999864
No 214
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.4e-39 Score=329.83 Aligned_cols=249 Identities=14% Similarity=0.138 Sum_probs=181.1
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.||+|++..... .....+.+.++...++.++||||+++++++.+.+ ..++|||
T Consensus 11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~--~~~lv~e 86 (290)
T 3fme_A 11 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN--SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG--DVWICME 86 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C--HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--SEEEEEE
T ss_pred hHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC--cHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccC--CEEEEEe
Confidence 3489999999999999985 678899998854322 1222334555555688889999999999999877 7899999
Q ss_pred ecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 441 YASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 441 ~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|++ |+|.+++.. .....+++..+..++.|++.||+|||+++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 163 (290)
T 3fme_A 87 LMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD 163 (290)
T ss_dssp CCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC---------
T ss_pred hhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccccccc
Confidence 997 588887753 12336999999999999999999999853 8999999999999999999999999999765432
Q ss_pred CCCCCCcccccCccccCCccc----ccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 519 SEKNPGTLGSQGAICILPSSL----EARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~----~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
.. .....++..|+|||.+ .+..++.++||||||+++|||+||+.||....................
T Consensus 164 ~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------- 233 (290)
T 3fme_A 164 VA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQ------- 233 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCC-------
T ss_pred cc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCC-------
Confidence 21 1122345679999996 456789999999999999999999999975444333332222111000
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
......+..+.+++.+||+.||++|||+.|+++
T Consensus 234 ---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 234 ---LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ---CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---cccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 011123456889999999999999999999987
No 215
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.8e-39 Score=345.35 Aligned_cols=260 Identities=16% Similarity=0.192 Sum_probs=190.7
Q ss_pred hhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC----CceE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP----FTRM 436 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----~~~~ 436 (658)
.+.+.||+|+||.||+|++..+..+|+|++...... ..+|++++++++||||+++++++...+. ...+
T Consensus 43 ~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~--------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 43 TNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF--------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS--------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred EEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch--------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 345899999999999999988888999998644322 2369999999999999999999865431 1378
Q ss_pred EEEEecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec-CCCCceeccccchh
Q 006178 437 LVFDYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKLVDFDSWK 513 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGla~ 513 (658)
+||||+++ ++.+.+.. .....+++..+..++.||++||+|||++ +|+||||||+|||++ .++.+||+|||+|+
T Consensus 115 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 115 LVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 99999976 44444331 1233599999999999999999999999 999999999999999 78999999999998
Q ss_pred hhhhcCCCCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCc--HHHHHHHhhcCC-----
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGN--LVDWAKDYLELP----- 585 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~--~~~~~~~~~~~~----- 585 (658)
.+..... .....++..|+|||.+.+. .++.++|||||||++|||++|+.||.+.... +....+......
T Consensus 191 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~ 267 (394)
T 4e7w_A 191 ILIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIK 267 (394)
T ss_dssp ECCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred cccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 6533221 1222346679999998765 5899999999999999999999999765421 111111110000
Q ss_pred ---cccccccCCcCCC------CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--Hhhc
Q 006178 586 ---EVMSYVVDPELKH------FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM--LEGR 635 (658)
Q Consensus 586 ---~~~~~~~~~~~~~------~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~--L~~~ 635 (658)
.......-+.... ++...+..+.+|+.+||+.||++|||+.|+++. ++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 328 (394)
T 4e7w_A 268 TMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328 (394)
T ss_dssp HHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred hhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence 0000000011111 112244678999999999999999999999975 4444
No 216
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=7.9e-40 Score=345.68 Aligned_cols=253 Identities=11% Similarity=0.011 Sum_probs=177.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc--cCCCcccee-------eEEecCC
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI--NHENTGKLL-------GYCRESS 431 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l--~H~nIv~l~-------~~~~~~~ 431 (658)
+.+.||+|+||.||+|++. +++.||+|++...... .....+.+.+|+.+++.+ +||||++++ +++...+
T Consensus 66 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~ 144 (371)
T 3q60_A 66 LVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAEN-SRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQS 144 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTT-HHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETT
T ss_pred eeeeccCCCCEEEEEEEECCCCceeEEEEEEecccc-cccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCC
Confidence 3489999999999999976 6788999988654322 234455788886555555 699988755 4443322
Q ss_pred C---------------CceEEEEEecCCCChhhhhccCCCCCCCHHHH------HHHHHHHHHHHHHhhhcCCCCeeecc
Q 006178 432 P---------------FTRMLVFDYASNGTLYEHLHYGERCQVSWTRR------MKIVIGIARGLKYLHTELGPPFTISE 490 (658)
Q Consensus 432 ~---------------~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~qia~gL~yLH~~~~~~ivHrD 490 (658)
. ...++||||++ |+|.+++..... .+++..+ ..++.||++||+|||++ +|+|||
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivHrD 219 (371)
T 3q60_A 145 QPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF-VYVFRGDEGILALHILTAQLIRLAANLQSK---GLVHGH 219 (371)
T ss_dssp SCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEETT
T ss_pred CCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc-ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCccCc
Confidence 1 13799999998 899999985432 3455666 78889999999999999 999999
Q ss_pred CCCcceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCccccc--CCCCccccchhhHHHHHHHHhCCCCCC
Q 006178 491 LNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEA--RHLDVQGNIYAFGVLLLEIISGRPPCC 568 (658)
Q Consensus 491 lkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~ksDVwS~Gvvl~elltG~~p~~ 568 (658)
|||+|||++.++.+||+|||+|+...... ....++..|+|||.+.+ ..++.++|||||||++|||+||+.||.
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~ 294 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGTRG-----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFG 294 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTCEE-----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTT
T ss_pred CCHHHEEECCCCCEEEEecceeeecCCCc-----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999998653211 12334478999999987 679999999999999999999999997
Q ss_pred CCCCcHHHHHHHhhcCCcccccccCCcCC-CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 569 KDKGNLVDWAKDYLELPEVMSYVVDPELK-HFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
........ .... ............ ......+..+.+|+.+||+.||++|||+.|+++
T Consensus 295 ~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 295 LVTPGIKG----SWKR-PSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp BCCTTCTT----CCCB-CCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CcCccccc----chhh-hhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 54321100 0000 000000000000 111234567889999999999999999999875
No 217
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.1e-38 Score=349.29 Aligned_cols=252 Identities=19% Similarity=0.211 Sum_probs=198.6
Q ss_pred HhhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEE
Q 006178 359 CEDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRML 437 (658)
Q Consensus 359 ~~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~l 437 (658)
.+.+.+.||+|+||.||+|+.. +++.||+|++...... .....+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 27 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~l 103 (484)
T 3nyv_A 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVK-QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG--YFYL 103 (484)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-BSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred ceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcc-cchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEE
Confidence 3445689999999999999986 6789999988543321 2234567899999999999999999999999877 7899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee---cCCCCceeccccchhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL---TEDFSPKLVDFDSWKT 514 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~ 514 (658)
||||+.+|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++.
T Consensus 104 v~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 178 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178 (484)
T ss_dssp EECCCCSCBHHHHHHTCS--CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred EEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence 999999999999997554 499999999999999999999999 99999999999999 4678999999999986
Q ss_pred hhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 515 ILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
+... .......+++.|+|||.+.+ .++.++||||+||++|||++|+.||...... ............. ..+
T Consensus 179 ~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~~---~~~ 249 (484)
T 3nyv_A 179 FEAS---KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY--DILKKVEKGKYTF---ELP 249 (484)
T ss_dssp BCCC---CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCCC---CSG
T ss_pred cccc---cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHcCCCCC---CCc
Confidence 5322 11222345677999999875 6999999999999999999999999754321 1112111111000 001
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 250 ~~----~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 250 QW----KKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp GG----GGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 11 1234568899999999999999999999864
No 218
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2e-39 Score=365.54 Aligned_cols=255 Identities=18% Similarity=0.252 Sum_probs=198.5
Q ss_pred hhhcccccCCCCeeEEEEEecC----CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCce
Q 006178 360 EDFSNIIGSSPDSLVYKGTMKG----GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~~----~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 435 (658)
+.+.+.||+|+||.||+|++.. +..+|+|++... ......+.+.+|+.++++++||||+++++++.+ + ..
T Consensus 392 y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~--~~ 465 (656)
T 2j0j_A 392 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC---TSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N--PV 465 (656)
T ss_dssp EEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST---TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SC
T ss_pred EEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc---CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-C--ce
Confidence 3445889999999999999753 345777776322 223345679999999999999999999999854 3 46
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 466 ~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~ 541 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541 (656)
T ss_dssp EEEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred EEEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeec
Confidence 99999999999999997543 3589999999999999999999999 9999999999999999999999999999865
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
.... ......+.++..|+|||.+.+..++.++|||||||++|||++ |..||...... .........
T Consensus 542 ~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--~~~~~i~~~---------- 608 (656)
T 2j0j_A 542 EDST-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIENG---------- 608 (656)
T ss_dssp CC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHHT----------
T ss_pred CCCc-ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHcC----------
Confidence 3222 111223334567999999999999999999999999999997 99999754322 111111111
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccC
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRID 637 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 637 (658)
.....+...+..+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 609 ~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 609 ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 0111223345678899999999999999999999999998764
No 219
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3.8e-39 Score=339.11 Aligned_cols=256 Identities=17% Similarity=0.167 Sum_probs=177.7
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC----CCceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS----PFTRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----~~~~~ 436 (658)
+.+.||+|+||.||+|.+. +|+.||+|++.... ......+.+.+|++++++++||||+++++++.... ....+
T Consensus 33 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~ 110 (367)
T 2fst_X 33 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 110 (367)
T ss_dssp EEEECC----CCEEEEEETTTTEEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred EeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc--cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEE
Confidence 3488999999999999975 57889999875432 22334567889999999999999999999987542 12569
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+ +++|.+++... .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 111 lv~e~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 111 LVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp EEEECC-CEECC-----C---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred EEeccc-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 999999 68999998752 599999999999999999999999 99999999999999999999999999998653
Q ss_pred hcCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCCc--cccccc
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELPE--VMSYVV 592 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~~--~~~~~~ 592 (658)
.. .....++..|+|||.+.+ ..++.++|||||||++|||+||+.||.+.... ....+......+. ....+.
T Consensus 184 ~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~ 258 (367)
T 2fst_X 184 DE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258 (367)
T ss_dssp ------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCC
T ss_pred cc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence 22 112234567999999887 67999999999999999999999999754421 1111111111110 000000
Q ss_pred C----------CcCCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 593 D----------PELKHFS-----YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 593 ~----------~~~~~~~-----~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. +.....+ ...+..+.+|+.+||+.||++|||+.|+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0 0000111 1224568899999999999999999999875
No 220
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1e-38 Score=330.99 Aligned_cols=261 Identities=19% Similarity=0.194 Sum_probs=194.1
Q ss_pred hcccccCCCCeeEEEEEec--CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc---cCCCccceeeEEecC---CCC
Q 006178 362 FSNIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI---NHENTGKLLGYCRES---SPF 433 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~--~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~---~~~ 433 (658)
+.+.||+|+||.||+|++. +++.||+|++....... .....+.+|+.+++++ +||||+++++++... ...
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 92 (326)
T 1blx_A 15 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE--GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET 92 (326)
T ss_dssp EEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT--SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEE
T ss_pred eeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccc--cCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCc
Confidence 3489999999999999983 57789999886544221 1122466788877777 899999999998721 112
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchh
Q 006178 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 434 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
..++||||++ |+|.+++.......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 93 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 93 KLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred eEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 6899999997 6999999876555699999999999999999999999 99999999999999999999999999987
Q ss_pred hhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCCc--cccc
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELPE--VMSY 590 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~~--~~~~ 590 (658)
....... .....++..|+|||.+.+..++.++|||||||++|||+||+.||...... ....+......+. ....
T Consensus 169 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 245 (326)
T 1blx_A 169 IYSFQMA---LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 245 (326)
T ss_dssp CCCGGGG---GCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCT
T ss_pred cccCCCC---ccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCcc
Confidence 6532211 11223456799999999999999999999999999999999999754421 1111111111100 0000
Q ss_pred -------cc----CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 591 -------VV----DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 591 -------~~----~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. ......+....+..+.+++.+||+.||++|||+.|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 246 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00 000111222345678899999999999999999999964
No 221
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=8.3e-39 Score=331.13 Aligned_cols=251 Identities=16% Similarity=0.167 Sum_probs=188.7
Q ss_pred HhhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccc----cchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCC
Q 006178 359 CEDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH----WTGYLELYFQREVADLARINHENTGKLLGYCRESSPF 433 (658)
Q Consensus 359 ~~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~----~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 433 (658)
.+.+.+.||+|+||.||+|++. +++.||+|.+...... ........+.+|++++++++||||+++++++....
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 88 (322)
T 2ycf_A 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-- 88 (322)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS--
T ss_pred ceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc--
Confidence 3455689999999999999986 4678999987543211 11122345889999999999999999999987653
Q ss_pred ceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC---ceecccc
Q 006178 434 TRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS---PKLVDFD 510 (658)
Q Consensus 434 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFG 510 (658)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 162 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFG 162 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred -eEEEEecCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccCc
Confidence 699999999999999987544 599999999999999999999999 9999999999999987654 9999999
Q ss_pred chhhhhhcCCCCCCcccccCccccCCcccc---cCCCCccccchhhHHHHHHHHhCCCCCCCCCC--cHHHHHHHhhcCC
Q 006178 511 SWKTILARSEKNPGTLGSQGAICILPSSLE---ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG--NLVDWAKDYLELP 585 (658)
Q Consensus 511 la~~~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~--~~~~~~~~~~~~~ 585 (658)
+++...... ......++..|+|||.+. ...++.++|||||||++|||+||+.||..... .+.........
T Consensus 163 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~-- 237 (322)
T 2ycf_A 163 HSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY-- 237 (322)
T ss_dssp TCEECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCC--
T ss_pred cceeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCcc--
Confidence 987642110 011223456799999974 46789999999999999999999999965432 22222211100
Q ss_pred cccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 586 EVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
..... .....+..+.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~~~--------~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 238 NFIPE--------VWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CCCHH--------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccCch--------hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 00000 00112456889999999999999999999985
No 222
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=3e-39 Score=365.20 Aligned_cols=247 Identities=17% Similarity=0.139 Sum_probs=197.7
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLV 438 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv 438 (658)
.+.+.||+|+||.||+|++. +++.||+|++..... ......+.+..|..++..+ +||||+++++++.+.+ ..|+|
T Consensus 344 ~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~-~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~--~~~lV 420 (674)
T 3pfq_A 344 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV-IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RLYFV 420 (674)
T ss_dssp EEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHH-HHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS--EEEEE
T ss_pred EEEEEEccCCCEEEEEEEECCCCcEEEEEEEecccc-ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC--EEEEE
Confidence 34489999999999999986 467799998854321 1122345688999999988 7999999999998877 78999
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|||+++|+|.+++...+ .+++..+..|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 421 ~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 421 MEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred EeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 99999999999998654 499999999999999999999999 9999999999999999999999999999853322
Q ss_pred CCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKH 598 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (658)
.. ......++..|+|||++.+..|+.++|||||||++|||+||+.||..... .+.......... .
T Consensus 496 ~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~--~~~~~~i~~~~~-----------~ 560 (674)
T 3pfq_A 496 GV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQSIMEHNV-----------A 560 (674)
T ss_dssp TC--CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHSSCC-----------C
T ss_pred Cc--ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH--HHHHHHHHhCCC-----------C
Confidence 21 12223456789999999999999999999999999999999999975432 222222222111 1
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 006178 599 FSYDDLKVICEVVNLCVNPDITKRPSM-----QELCT 630 (658)
Q Consensus 599 ~~~~~~~~~~~li~~cl~~dP~~RPs~-----~evl~ 630 (658)
++...+.++.+|+.+||+.||++||++ +||++
T Consensus 561 ~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 561 YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 233345678899999999999999997 66654
No 223
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.2e-38 Score=332.03 Aligned_cols=256 Identities=16% Similarity=0.177 Sum_probs=196.6
Q ss_pred hhhcccccCCCCeeEEEEEe-c-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCC------ccceeeEEecCC
Q 006178 360 EDFSNIIGSSPDSLVYKGTM-K-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN------TGKLLGYCRESS 431 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~-~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n------Iv~l~~~~~~~~ 431 (658)
+.+.+.||+|+||.||+|.+ . +++.||+|.+... ....+.+.+|++++++++|++ ++++++++.+.+
T Consensus 16 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred eEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 34458999999999999997 3 5778899887422 223467889999999997665 999999998877
Q ss_pred CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC-----------
Q 006178 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE----------- 500 (658)
Q Consensus 432 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~----------- 500 (658)
..++||||+ +++|.+++.......+++..+..++.|++.||+|||++ +|+||||||+|||++.
T Consensus 91 --~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~ 164 (339)
T 1z57_A 91 --HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKI 164 (339)
T ss_dssp --EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC---
T ss_pred --cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcc
Confidence 789999999 88999999877655799999999999999999999999 9999999999999987
Q ss_pred --------CCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC
Q 006178 501 --------DFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG 572 (658)
Q Consensus 501 --------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~ 572 (658)
++.+||+|||+++..... .....++..|+|||.+.+..++.++|||||||++|||+||+.||.....
T Consensus 165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 239 (339)
T 1z57_A 165 KRDERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS 239 (339)
T ss_dssp -CEEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH
T ss_pred ccccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh
Confidence 668999999998764321 1122345679999999999999999999999999999999999976543
Q ss_pred cHH-HHHHHhhc-CCcccc------c---------------------ccC--CcCCCCCHHHHHHHHHHHHHccCCCCCC
Q 006178 573 NLV-DWAKDYLE-LPEVMS------Y---------------------VVD--PELKHFSYDDLKVICEVVNLCVNPDITK 621 (658)
Q Consensus 573 ~~~-~~~~~~~~-~~~~~~------~---------------------~~~--~~~~~~~~~~~~~~~~li~~cl~~dP~~ 621 (658)
... ........ .+.... . ... ..........++.+.+++.+||+.||++
T Consensus 240 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 319 (339)
T 1z57_A 240 KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319 (339)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccc
Confidence 211 11111111 000000 0 000 0001123455778999999999999999
Q ss_pred CCCHHHHHHH
Q 006178 622 RPSMQELCTM 631 (658)
Q Consensus 622 RPs~~evl~~ 631 (658)
|||+.|+++.
T Consensus 320 Rpt~~ell~h 329 (339)
T 1z57_A 320 RITLREALKH 329 (339)
T ss_dssp SCCHHHHTTS
T ss_pred ccCHHHHhcC
Confidence 9999999864
No 224
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3.3e-38 Score=322.82 Aligned_cols=249 Identities=20% Similarity=0.193 Sum_probs=194.8
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccc-----cchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCce
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEH-----WTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~-----~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~ 435 (658)
.+.||+|+||.||+|++. +++.||+|.+...... ......+.+.+|+++++++. ||||+++++++.+.+ ..
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~--~~ 99 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT--FF 99 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EE
T ss_pred eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCC--eE
Confidence 488999999999999986 5778999988543211 11233467889999999995 999999999998877 78
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
++||||+++++|.+++.... .+++..+..++.||+.||+|||++ +++||||||+||+++.++.+||+|||++...
T Consensus 100 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 174 (298)
T 1phk_A 100 FLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174 (298)
T ss_dssp EEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccchhhc
Confidence 99999999999999997543 589999999999999999999999 9999999999999999999999999998765
Q ss_pred hhcCCCCCCcccccCccccCCcccc------cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccc
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLE------ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS 589 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~------~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 589 (658)
.... ......++..|+|||.+. ...++.++||||||+++|||++|+.||...... ............
T Consensus 175 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~-- 247 (298)
T 1phk_A 175 DPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM--LMLRMIMSGNYQ-- 247 (298)
T ss_dssp CTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCC--
T ss_pred CCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH--HHHHHHhcCCcc--
Confidence 3221 112233456799999985 456899999999999999999999999654321 111111111000
Q ss_pred cccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 590 YVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
...+. ....+..+.+++.+||+.||++|||+.|+++
T Consensus 248 -~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 248 -FGSPE----WDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp -CCTTT----GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred -cCccc----ccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 00111 1223466889999999999999999999986
No 225
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.4e-38 Score=339.32 Aligned_cols=259 Identities=15% Similarity=0.100 Sum_probs=194.5
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc--------CCCccceeeEEecC
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN--------HENTGKLLGYCRES 430 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~--------H~nIv~l~~~~~~~ 430 (658)
+.+.+.||+|+||.||+|++. +++.||+|++... ....+.+.+|++++++++ |+||+++++++...
T Consensus 39 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred EEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 444589999999999999975 5678889887422 233567889999999995 78899999998732
Q ss_pred --CCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCC------
Q 006178 431 --SPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDF------ 502 (658)
Q Consensus 431 --~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~------ 502 (658)
.....++||||+ +++|.+++.......+++..++.|+.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhh
Confidence 112689999999 667777776555456999999999999999999999864 899999999999999775
Q ss_pred -------------------------------------------CceeccccchhhhhhcCCCCCCcccccCccccCCccc
Q 006178 503 -------------------------------------------SPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSL 539 (658)
Q Consensus 503 -------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~ 539 (658)
.+||+|||+++...... ....++..|+|||.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~-----~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF-----TEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS-----CSCCSCGGGCCHHHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC-----ccCCCCCcccCChhh
Confidence 79999999987654221 222346779999999
Q ss_pred ccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc----HHH---HHHHhhcC-Cc-------ccccccCC----------
Q 006178 540 EARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN----LVD---WAKDYLEL-PE-------VMSYVVDP---------- 594 (658)
Q Consensus 540 ~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~----~~~---~~~~~~~~-~~-------~~~~~~~~---------- 594 (658)
.+..++.++|||||||++|||+||+.||...... ... ........ +. ........
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 9999999999999999999999999999754321 111 11111100 00 00000000
Q ss_pred ----------cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 595 ----------ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 595 ----------~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.....+...+..+.+|+.+||+.||++|||+.|+++.
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0012356777889999999999999999999999863
No 226
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=4.3e-38 Score=332.25 Aligned_cols=255 Identities=18% Similarity=0.195 Sum_probs=189.4
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCC----ceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF----TRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~----~~~ 436 (658)
+.+.||+|+||.||+|++. +++.||+|++.... ......+.+.+|+.++++++||||+++++++...+.. ..+
T Consensus 46 ~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~ 123 (371)
T 4exu_A 46 SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF--QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 123 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCE
T ss_pred EEeEEecCCCeEEEEEEECCCCCEEEEEEecccc--cchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEE
Confidence 3478999999999999976 57889999875432 2234456789999999999999999999999876521 239
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+. ++|.+++.. .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 124 lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 124 LVMPFMQ-TDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp EEEECCC-EEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred EEEcccc-ccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 9999996 689888743 389999999999999999999999 99999999999999999999999999998653
Q ss_pred hcCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCC-ccc-cc--
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELP-EVM-SY-- 590 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~-~~~-~~-- 590 (658)
... ....++..|+|||.+.+ ..++.++|||||||++|||+||+.||...... ...........+ ... ..
T Consensus 196 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 270 (371)
T 4exu_A 196 AEM-----TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 270 (371)
T ss_dssp ---------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCS
T ss_pred cCc-----CCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhh
Confidence 321 11234567999999887 67999999999999999999999999754321 111111111000 000 00
Q ss_pred ----------ccCCcCC---CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 591 ----------VVDPELK---HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 591 ----------~~~~~~~---~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
....... ......+..+.+|+.+||+.||++|||+.|+++.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 271 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0000000 0111234678899999999999999999999876
No 227
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.7e-38 Score=334.11 Aligned_cols=262 Identities=16% Similarity=0.155 Sum_probs=181.1
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC-----CceE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP-----FTRM 436 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-----~~~~ 436 (658)
.+.||+|+||.||+|++. ++..||||++...... ...+.+|++.++.++||||+++++++...+. ...+
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~ 102 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF-----RNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLN 102 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECCTTC-----CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc-----cHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEE
Confidence 489999999999999986 5788999988543222 2346678888999999999999999865431 1378
Q ss_pred EEEEecCCCChhhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhh--hcCCCCeeeccCCCcceeecC-CCCceeccccc
Q 006178 437 LVFDYASNGTLYEHLHY--GERCQVSWTRRMKIVIGIARGLKYLH--TELGPPFTISELNSSAVYLTE-DFSPKLVDFDS 511 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qia~gL~yLH--~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGl 511 (658)
+||||+++ +|.+.+.. .....+++..+..++.|++.||+||| ++ +|+||||||+|||++. ++.+||+|||+
T Consensus 103 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~kl~Dfg~ 178 (360)
T 3e3p_A 103 VVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTLKLCDFGS 178 (360)
T ss_dssp EEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEEEECCCTT
T ss_pred EEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcEEEeeCCC
Confidence 99999976 65554432 23346899999999999999999999 88 9999999999999997 89999999999
Q ss_pred hhhhhhcCCCCCCcccccCccccCCcccccCC-CCccccchhhHHHHHHHHhCCCCCCCCCCc--HHHHHHHhhcCCccc
Q 006178 512 WKTILARSEKNPGTLGSQGAICILPSSLEARH-LDVQGNIYAFGVLLLEIISGRPPCCKDKGN--LVDWAKDYLELPEVM 588 (658)
Q Consensus 512 a~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~ksDVwS~Gvvl~elltG~~p~~~~~~~--~~~~~~~~~~~~~~~ 588 (658)
++.+..... .....++..|+|||.+.+.. ++.++|||||||++|||+||+.||...... ...............
T Consensus 179 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 255 (360)
T 3e3p_A 179 AKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREV 255 (360)
T ss_dssp CBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred ceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHH
Confidence 986543221 12223466799999987654 899999999999999999999999764421 111111110000000
Q ss_pred ----------ccccCCc-------CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--Hhhcc
Q 006178 589 ----------SYVVDPE-------LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM--LEGRI 636 (658)
Q Consensus 589 ----------~~~~~~~-------~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~--L~~~~ 636 (658)
....... ........+..+.+|+.+||+.||.+|||+.|+++. ++++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 322 (360)
T 3e3p_A 256 LRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322 (360)
T ss_dssp HHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred HHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence 0000000 011122246779999999999999999999999975 44443
No 228
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=8.4e-39 Score=333.75 Aligned_cols=248 Identities=15% Similarity=0.170 Sum_probs=189.7
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHH-HHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVAD-LARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.+.||+|+||.||+|++. +++.||||++...... ....++..|..+ ++.++||||+++++++.+.+ ..++|||
T Consensus 56 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~--~~~lv~e 130 (340)
T 3an0_A 56 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS---QEQKRLLMDLDISMRTVDCPFTVTFYGALFREG--DVWICME 130 (340)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCC---HHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSS--CEEEEEC
T ss_pred eeEecccCCEEEEEEEEcCCCCEEEEEEeccccCc---HHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCC--cEEEEHH
Confidence 478999999999999974 6788999988543221 233455666665 77789999999999999877 7899999
Q ss_pred ecCCCChhhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhc
Q 006178 441 YASNGTLYEHLHYG--ERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILAR 518 (658)
Q Consensus 441 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~ 518 (658)
|+++ +|.+++... ....+++..+..++.||+.||+|||++. +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 131 ~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 207 (340)
T 3an0_A 131 LMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS 207 (340)
T ss_dssp CCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCH
T ss_pred HhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceecccc
Confidence 9975 999888631 2346999999999999999999999742 8999999999999999999999999999875321
Q ss_pred CCCCCCcccccCccccCCcccc----cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 519 SEKNPGTLGSQGAICILPSSLE----ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 519 ~~~~~~~~~~~~~~~~aPE~~~----~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
.. .....++..|+|||.+. ...++.++|||||||++|||+||+.||.................. +
T Consensus 208 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~--------~ 276 (340)
T 3an0_A 208 VA---KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS--------P 276 (340)
T ss_dssp HH---HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCC--------C
T ss_pred cc---cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCC--------C
Confidence 11 11123456799999964 347899999999999999999999999754433222222111110 0
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. .....+..+.+++.+||+.||++|||+.|+++.
T Consensus 277 ~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 277 QL--PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp CC--CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CC--CcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 00 111234668899999999999999999999873
No 229
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=4.6e-38 Score=331.26 Aligned_cols=260 Identities=18% Similarity=0.170 Sum_probs=194.1
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCC---CceEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSP---FTRML 437 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~---~~~~l 437 (658)
+.+.||+|+||.||+|++. ++..||+|++.... .....+.+.+|++++++++||||+++++++..... ...++
T Consensus 31 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i 107 (364)
T 3qyz_A 31 NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE---HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107 (364)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT---CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred EEEEeecCCCeEEEEEEECCCCeEEEEEEecccc---CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence 3489999999999999976 56789999875322 22344678999999999999999999999975431 25799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+. |+|.+++... .+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 108 v~e~~~-~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 108 VQDLME-TDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp EEECCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred EEcccC-cCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 999996 5999998754 489999999999999999999999 999999999999999999999999999986543
Q ss_pred cCCCCC-CcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCC-cHHHHHHHhhcCCcc--cccc-
Q 006178 518 RSEKNP-GTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKG-NLVDWAKDYLELPEV--MSYV- 591 (658)
Q Consensus 518 ~~~~~~-~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~-~~~~~~~~~~~~~~~--~~~~- 591 (658)
...... .....++..|+|||.+.+ ..++.++|||||||++|||+||+.||..... .....+......+.. ....
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 260 (364)
T 3qyz_A 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 260 (364)
T ss_dssp GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCC
T ss_pred CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence 322111 122345677999998764 4589999999999999999999999975442 111111111111000 0000
Q ss_pred ---------cCCcCCCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 592 ---------VDPELKHF-----SYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 592 ---------~~~~~~~~-----~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..+..... ....+..+.+|+.+||+.||++|||+.|+++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000001 11234568899999999999999999999875
No 230
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=7.5e-38 Score=318.41 Aligned_cols=252 Identities=18% Similarity=0.208 Sum_probs=195.3
Q ss_pred HHhhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceE
Q 006178 358 ACEDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 358 ~~~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 436 (658)
..+.+.+.||+|+||.||+|+.. +++.||+|.+...... ....+.+.+|++++++++||||+++++++.+.+ ..+
T Consensus 22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 97 (287)
T 2wei_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK--NKDTSTILREVELLKKLDHPNIMKLFEILEDSS--SFY 97 (287)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS--SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEE
T ss_pred hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc--hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCC--eEE
Confidence 34455689999999999999986 6788999987543322 223567899999999999999999999998877 789
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC---CCceeccccchh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED---FSPKLVDFDSWK 513 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla~ 513 (658)
+||||+++++|.+++.... .+++.++..++.|++.||+|||++ +++||||||+||+++.+ +.+||+|||++.
T Consensus 98 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp EEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred EEEEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence 9999999999999887543 489999999999999999999999 99999999999999754 469999999987
Q ss_pred hhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccC
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (658)
....... .....++..|+|||.+.+ .++.++||||||+++|||++|+.||...... ............. ..
T Consensus 173 ~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~---~~ 243 (287)
T 2wei_A 173 CFQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILKRVETGKYAF---DL 243 (287)
T ss_dssp TBCCCSS---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCCC---CS
T ss_pred eecCCCc---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHcCCCCC---Cc
Confidence 6532211 112234566999998865 5899999999999999999999999754322 2222211111000 00
Q ss_pred CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 594 PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 594 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+... ..+..+.+++.+||+.||++|||+.|+++.
T Consensus 244 ~~~~----~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 244 PQWR----TISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp GGGT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hhhh----hcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 1111 223568899999999999999999999873
No 231
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.6e-38 Score=325.00 Aligned_cols=258 Identities=16% Similarity=0.214 Sum_probs=184.8
Q ss_pred cccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC----------
Q 006178 363 SNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---------- 431 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~---------- 431 (658)
.+.||+|+||.||+|++.. ++.||+|++.... ....+.+.+|++++++++||||+++++++....
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 91 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD----PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSL 91 (320)
T ss_dssp EEECC-----CEEEEEETTTTEEEEEEEEECCS----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----C
T ss_pred EEEeccCCCeEEEEEEECCCCeEEEEEEEecCC----hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccc
Confidence 4789999999999999874 7889999875432 234567899999999999999999999885321
Q ss_pred --CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec-CCCCceecc
Q 006178 432 --PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKLVD 508 (658)
Q Consensus 432 --~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~-~~~~~kl~D 508 (658)
....++||||++ |+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++ +++.+||+|
T Consensus 92 ~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 92 TELNSVYIVQEYME-TDLANVLEQG---PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp CSCSEEEEEEECCS-EEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECC
T ss_pred cccCceeEEeeccC-CCHHHHhhcC---CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEcc
Confidence 126799999997 6999999643 589999999999999999999999 999999999999997 567999999
Q ss_pred ccchhhhhhcCC-CCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcH-HHHHHHhhcCC
Q 006178 509 FDSWKTILARSE-KNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-VDWAKDYLELP 585 (658)
Q Consensus 509 FGla~~~~~~~~-~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-~~~~~~~~~~~ 585 (658)
||+++....... ........++..|+|||.+.+ ..++.++|||||||++|||+||+.||....... ...........
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 244 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVV 244 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCC
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 999886542211 111223334667999998865 679999999999999999999999997544211 11111100000
Q ss_pred c---------ccccc----c-CCcC--CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 586 E---------VMSYV----V-DPEL--KHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 586 ~---------~~~~~----~-~~~~--~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
. ..... . .+.. .......+..+.+++.+||+.||++|||+.|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 245 HEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred chhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 0 00000 0 0000 00011234678899999999999999999999874
No 232
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=4.9e-38 Score=329.67 Aligned_cols=255 Identities=18% Similarity=0.199 Sum_probs=192.0
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCC----ceE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF----TRM 436 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~----~~~ 436 (658)
+.+.||+|+||.||+|++. +|+.||+|++.... ......+.+.+|+.++++++||||+++++++...+.. ..+
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 105 (353)
T 3coi_A 28 SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF--QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 105 (353)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred EeeeEecCCCeEEEEEEECCCCCEEEEEEecccc--cchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEE
Confidence 3478999999999999986 57889999885432 2233456789999999999999999999999875421 349
Q ss_pred EEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhh
Q 006178 437 LVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTIL 516 (658)
Q Consensus 437 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~ 516 (658)
+||||+. |+|.+++.. .+++..+..++.||+.||+|||++ +|+||||||+||++++++.+||+|||+++...
T Consensus 106 lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 106 LVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp EEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred EEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 9999996 699888753 389999999999999999999999 99999999999999999999999999987643
Q ss_pred hcCCCCCCcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCc-HHHHHHHhhcCCc--------
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN-LVDWAKDYLELPE-------- 586 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~~-------- 586 (658)
... ....++..|+|||.+.+ ..++.++|||||||++|||+||+.||...... ...........+.
T Consensus 178 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 252 (353)
T 3coi_A 178 AEM-----TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 252 (353)
T ss_dssp -----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCS
T ss_pred CCc-----cccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHh
Confidence 221 12234567999999887 67899999999999999999999999754421 1111111100000
Q ss_pred ---------ccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 587 ---------VMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 587 ---------~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.......+.........+..+.+++.+||+.||++|||+.|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 253 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp CHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000001111222233445778999999999999999999999875
No 233
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=5.2e-38 Score=321.83 Aligned_cols=251 Identities=20% Similarity=0.280 Sum_probs=188.0
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC--------
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS-------- 431 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-------- 431 (658)
.+.+.||+|+||.||+|+.. +++.||+|.+... ....+.+.+|+.++++++||||+++++++.+..
T Consensus 9 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 9 EEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-----EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred hhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 33489999999999999975 6889999988432 223467899999999999999999999886532
Q ss_pred ---CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceecc
Q 006178 432 ---PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVD 508 (658)
Q Consensus 432 ---~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~D 508 (658)
....++||||+++|+|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEee
Confidence 126799999999999999997543 3578999999999999999999999 999999999999999999999999
Q ss_pred ccchhhhhhcCC------------CCCCcccccCccccCCcccccC-CCCccccchhhHHHHHHHHhCCCCCCCCCCcHH
Q 006178 509 FDSWKTILARSE------------KNPGTLGSQGAICILPSSLEAR-HLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLV 575 (658)
Q Consensus 509 FGla~~~~~~~~------------~~~~~~~~~~~~~~aPE~~~~~-~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~ 575 (658)
||+++....... ........++..|+|||.+.+. .++.++|||||||++|||++ ||.... ...
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~-~~~ 235 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM-ERV 235 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-HHH
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-hHH
Confidence 999876532110 0111122345679999998864 78999999999999999998 553211 111
Q ss_pred HHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 576 DWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
............ .. ..++...+..+.+++.+||+.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~----~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 236 NILKKLRSVSIE----FP---PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHHSTTCC----CC---TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHhccccccc----cC---ccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 111111111000 11 11233444668899999999999999999999874
No 234
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.4e-38 Score=333.75 Aligned_cols=260 Identities=15% Similarity=0.132 Sum_probs=192.0
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCC---CCceEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESS---PFTRML 437 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~---~~~~~l 437 (658)
+.+.||+|+||.||+|++. +++.||+|++.... .......+.+|++++++++||||+++++++.... ....++
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 91 (353)
T 2b9h_A 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYI 91 (353)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS---SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEE
T ss_pred EeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc---cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEE
Confidence 3488999999999999986 57889999884322 2334557889999999999999999999886541 126799
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
||||+. |+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 92 v~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 92 IQELMQ-TDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp EECCCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEeccC-ccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 999996 6999998753 489999999999999999999999 999999999999999999999999999986542
Q ss_pred cCCCCC--------CcccccCccccCCccccc-CCCCccccchhhHHHHHHHHhCCCCCCCCCCcH-HHHHHHhhcCCcc
Q 006178 518 RSEKNP--------GTLGSQGAICILPSSLEA-RHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNL-VDWAKDYLELPEV 587 (658)
Q Consensus 518 ~~~~~~--------~~~~~~~~~~~aPE~~~~-~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~-~~~~~~~~~~~~~ 587 (658)
...... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||....... ..........+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 244 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCS
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCch
Confidence 211111 111234667999998765 679999999999999999999999997654211 1111111111100
Q ss_pred ---cccccC----------CcCCC-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 588 ---MSYVVD----------PELKH-----FSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 588 ---~~~~~~----------~~~~~-----~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
...... +.... .....+..+.+++.+||+.||++|||+.|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp TTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000 00000 011234678899999999999999999999874
No 235
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.7e-38 Score=340.53 Aligned_cols=246 Identities=15% Similarity=0.151 Sum_probs=184.2
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E~~ 442 (658)
+.||+|+||+||.+...+|+.||||++.... .+.+.+|+++++++ +||||+++++++.+.+ ..++||||+
T Consensus 21 ~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~-------~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~--~~~lv~E~~ 91 (434)
T 2rio_A 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDF-------CDIALMEIKLLTESDDHPNVIRYYCSETTDR--FLYIALELC 91 (434)
T ss_dssp EEEEECSTTCEEEEEESSSSEEEEEEEEGGG-------HHHHHHHHHHHHHHTTSTTBCCEEEEEECSS--EEEEEECCC
T ss_pred CeEeeCCCeEEEEEEEECCeEEEEEEEcHHH-------HHHHHHHHHHHHhccCCCCcCeEEEEEecCC--eEEEEEecC
Confidence 7899999999987777788999999884321 24578999999987 8999999999998877 789999999
Q ss_pred CCCChhhhhccCCCCC-----CCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCC-------------CCc
Q 006178 443 SNGTLYEHLHYGERCQ-----VSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTED-------------FSP 504 (658)
Q Consensus 443 ~~gsL~~~l~~~~~~~-----l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-------------~~~ 504 (658)
. |+|.+++....... .++..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEE
Confidence 5 69999998654211 13334678999999999999999 99999999999999754 489
Q ss_pred eeccccchhhhhhcCCCC--CCcccccCccccCCccccc-------CCCCccccchhhHHHHHHHHh-CCCCCCCCCCcH
Q 006178 505 KLVDFDSWKTILARSEKN--PGTLGSQGAICILPSSLEA-------RHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNL 574 (658)
Q Consensus 505 kl~DFGla~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~-------~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~ 574 (658)
||+|||+++.+....... ......++..|+|||++.+ ..++.++|||||||++|||+| |+.||.......
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~ 247 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence 999999998764322111 1112345677999999875 678999999999999999999 999996544333
Q ss_pred HHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 575 VDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
.......... . ......+...+.++.+++.+||+.||++|||+.||++
T Consensus 248 ~~i~~~~~~~----~----~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 SNIIRGIFSL----D----EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHHHTCCCC----C----CCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHhcCCCCc----c----cccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 2222211111 0 0011124567788999999999999999999999986
No 236
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.5e-38 Score=331.00 Aligned_cols=246 Identities=15% Similarity=0.226 Sum_probs=168.0
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHH-HHHHhccCCCccceeeEEecCC--CCceEEEE
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREV-ADLARINHENTGKLLGYCRESS--PFTRMLVF 439 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~-~~l~~l~H~nIv~l~~~~~~~~--~~~~~lv~ 439 (658)
+.||+|+||.||+|++. +++.||+|++.... ...+|+ ..++.++||||+++++++.... ....++||
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 105 (336)
T 3fhr_A 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSP---------KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIM 105 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESSH---------HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred eeeeeCCCeEEEEEEECCCCCEEEEEEecCcH---------HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEE
Confidence 57999999999999987 67899999874321 122333 3356669999999999987522 11579999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC---CCCceeccccchhhhh
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKLVDFDSWKTIL 516 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~~~ 516 (658)
||+++|+|.+++.......+++.++..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||+++...
T Consensus 106 e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~ 182 (336)
T 3fhr_A 106 ECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 182 (336)
T ss_dssp ECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-
T ss_pred eccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccceecc
Confidence 999999999999876655799999999999999999999999 9999999999999986 4559999999987543
Q ss_pred hcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHH-HHHhhcCCcccccccCCc
Q 006178 517 ARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDW-AKDYLELPEVMSYVVDPE 595 (658)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 595 (658)
... .....++..|+|||.+.+..++.++||||||+++|||+||+.||.......... ....... .......+.
T Consensus 183 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 256 (336)
T 3fhr_A 183 QNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRL--GQYGFPNPE 256 (336)
T ss_dssp -------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------CCCTTT
T ss_pred ccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhc--cccccCchh
Confidence 211 122234567999999988889999999999999999999999996543221100 0000000 000000111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 596 LKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 596 ~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
....+..+.+++.+||+.||++|||+.|+++.
T Consensus 257 ----~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 257 ----WSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp ----STTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ----hccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 12334668899999999999999999999984
No 237
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1e-37 Score=330.83 Aligned_cols=196 Identities=22% Similarity=0.190 Sum_probs=162.2
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CC-----CccceeeEEecCCCCc
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HE-----NTGKLLGYCRESSPFT 434 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~-----nIv~l~~~~~~~~~~~ 434 (658)
+.+.||+|+||.||+|++. +++.||+|++... ....+++.+|+++++.++ |+ +|+++++++...+ .
T Consensus 58 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~--~ 130 (382)
T 2vx3_A 58 IDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN--H 130 (382)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT--E
T ss_pred EEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC--c
Confidence 3489999999999999976 5678999987432 123456788999998884 55 4999999998877 8
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec--CCCCceeccccch
Q 006178 435 RMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT--EDFSPKLVDFDSW 512 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~--~~~~~kl~DFGla 512 (658)
.++||||++ |+|.+++.......+++..+..++.|++.||+|||++ ..+|+||||||+|||++ .++.+||+|||++
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 899999996 5999999876555699999999999999999999952 12899999999999995 4778999999999
Q ss_pred hhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCC
Q 006178 513 KTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDK 571 (658)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~ 571 (658)
+..... .....++..|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 209 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 209 CQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp EETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 765322 122334567999999999999999999999999999999999997543
No 238
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.5e-38 Score=328.74 Aligned_cols=241 Identities=13% Similarity=0.176 Sum_probs=190.4
Q ss_pred hhcccccCCCCeeEEEEEec-CCCeEEEEEEeeecccc--chhhHHHHHHHHHHHHhcc--CCCccceeeEEecCCCCce
Q 006178 361 DFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHW--TGYLELYFQREVADLARIN--HENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~--~~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~~ 435 (658)
.+.+.||+|+||.||+|+.. +++.||+|.+....... .....+.+.+|+.++++++ |+||+++++++.+.+ ..
T Consensus 46 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~--~~ 123 (320)
T 3a99_A 46 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD--SF 123 (320)
T ss_dssp EEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS--EE
T ss_pred EEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC--cE
Confidence 34589999999999999975 67889999886543211 0012235678999999995 599999999999877 78
Q ss_pred EEEEEecCC-CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec-CCCCceeccccchh
Q 006178 436 MLVFDYASN-GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKLVDFDSWK 513 (658)
Q Consensus 436 ~lv~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGla~ 513 (658)
++||||+.+ ++|.+++.... .+++..+..++.||++||+|||+. +|+||||||+||+++ +++.+||+|||+++
T Consensus 124 ~lv~e~~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~ 198 (320)
T 3a99_A 124 VLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGA 198 (320)
T ss_dssp EEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEEcCCCCccHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence 999999976 89999997643 489999999999999999999999 999999999999999 78899999999987
Q ss_pred hhhhcCCCCCCcccccCccccCCcccccCCC-CccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCccccccc
Q 006178 514 TILARSEKNPGTLGSQGAICILPSSLEARHL-DVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVV 592 (658)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (658)
...... .....++..|+|||.+.+..+ +.++||||||+++|||+||+.||.... .... ....
T Consensus 199 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----~~~~----~~~~----- 261 (320)
T 3a99_A 199 LLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIR----GQVF----- 261 (320)
T ss_dssp ECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----HHHH----CCCC-----
T ss_pred cccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh----hhhc----cccc-----
Confidence 653221 112235667999999987776 688999999999999999999995421 1111 0000
Q ss_pred CCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 593 DPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 593 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 262 ------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 262 ------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp ------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ------ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111223568899999999999999999999874
No 239
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2e-37 Score=325.14 Aligned_cols=256 Identities=13% Similarity=0.143 Sum_probs=193.6
Q ss_pred hhhcccccCCCCeeEEEEEec-CC-CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCC------ccceeeEEecCC
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GG-PEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN------TGKLLGYCRESS 431 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~-~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n------Iv~l~~~~~~~~ 431 (658)
+.+.+.||+|+||.||+|+.. ++ ..||+|.+... ....+.+.+|++++++++|++ ++.+++++...+
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 95 (355)
T 2eu9_A 21 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG 95 (355)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred EEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence 344589999999999999975 33 57888887422 233467889999999997766 899999998877
Q ss_pred CCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceee-------------
Q 006178 432 PFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYL------------- 498 (658)
Q Consensus 432 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl------------- 498 (658)
..++||||+ ++++.+++.......+++.++..++.||+.||+|||++ +|+||||||+|||+
T Consensus 96 --~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~ 169 (355)
T 2eu9_A 96 --HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHK 169 (355)
T ss_dssp --EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-
T ss_pred --eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccc
Confidence 789999999 66888888766555699999999999999999999999 99999999999999
Q ss_pred ------cCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCC
Q 006178 499 ------TEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKG 572 (658)
Q Consensus 499 ------~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~ 572 (658)
+.++.+||+|||+++..... .....++..|+|||.+.+..++.++|||||||++|||+||+.||.....
T Consensus 170 ~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (355)
T 2eu9_A 170 SCEEKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN 244 (355)
T ss_dssp CCCEEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred cccccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence 66789999999998764321 1223356779999999999999999999999999999999999975442
Q ss_pred cH-HHHHHHhhc-CCccc-------ccccCC----------------------cCCCCCHHHHHHHHHHHHHccCCCCCC
Q 006178 573 NL-VDWAKDYLE-LPEVM-------SYVVDP----------------------ELKHFSYDDLKVICEVVNLCVNPDITK 621 (658)
Q Consensus 573 ~~-~~~~~~~~~-~~~~~-------~~~~~~----------------------~~~~~~~~~~~~~~~li~~cl~~dP~~ 621 (658)
.. ...+..... .+... ...... .........+..+.+|+.+||+.||++
T Consensus 245 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 324 (355)
T 2eu9_A 245 REHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQ 324 (355)
T ss_dssp HHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhh
Confidence 21 111111111 00000 000000 000112344668899999999999999
Q ss_pred CCCHHHHHHH
Q 006178 622 RPSMQELCTM 631 (658)
Q Consensus 622 RPs~~evl~~ 631 (658)
|||+.|+++.
T Consensus 325 Rpt~~e~l~h 334 (355)
T 2eu9_A 325 RITLAEALLH 334 (355)
T ss_dssp SCCHHHHTTS
T ss_pred CcCHHHHhcC
Confidence 9999999853
No 240
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1e-37 Score=323.72 Aligned_cols=250 Identities=18% Similarity=0.204 Sum_probs=172.6
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHH-HHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVA-DLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
.+.||+|+||.||+|... +++.||+|++..... .....++.+|+. +++.++||||+++++++.+.+ ..++|||
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~--~~~lv~e 101 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD---EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG--DCWICME 101 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC---HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccC---chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC--ceEEEEe
Confidence 478999999999999986 678899998854322 223345566666 677789999999999999877 7899999
Q ss_pred ecCCCChhhhhcc---CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhh
Q 006178 441 YASNGTLYEHLHY---GERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILA 517 (658)
Q Consensus 441 ~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~ 517 (658)
|+++ +|.+++.. .....+++..+..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||+++....
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 9975 88887752 22346899999999999999999999853 899999999999999999999999999876543
Q ss_pred cCCCCCCcccccCccccCCccc----ccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccC
Q 006178 518 RSEKNPGTLGSQGAICILPSSL----EARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVD 593 (658)
Q Consensus 518 ~~~~~~~~~~~~~~~~~aPE~~----~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (658)
... .....++..|+|||.+ .+..++.++||||||+++|||+||+.||......... .. . ......
T Consensus 179 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~------~-~~~~~~ 247 (327)
T 3aln_A 179 SIA---KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ-LT------Q-VVKGDP 247 (327)
T ss_dssp ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------C------C-CCCSCC
T ss_pred ccc---cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHH-HH------H-HhcCCC
Confidence 221 1122345679999998 4567899999999999999999999999653221110 00 0 000001
Q ss_pred CcCC-CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 594 PELK-HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 594 ~~~~-~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
+.+. ......+..+.+++.+||+.||++|||+.|+++.
T Consensus 248 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 248 PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 1111 0112234568899999999999999999999763
No 241
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=325.61 Aligned_cols=242 Identities=16% Similarity=0.225 Sum_probs=186.5
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccc--hhhHHHHHHHHHHHHhc----cCCCccceeeEEecCCC
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWT--GYLELYFQREVADLARI----NHENTGKLLGYCRESSP 432 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~--~~~~~~~~~E~~~l~~l----~H~nIv~l~~~~~~~~~ 432 (658)
+.+.+.||+|+||.||+|++. +++.||+|.+........ ......+.+|+.++.++ +||||+++++++.+.+
T Consensus 33 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~- 111 (312)
T 2iwi_A 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQE- 111 (312)
T ss_dssp CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----
T ss_pred eEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCC-
Confidence 445589999999999999975 677899998754332110 01223466799999999 8999999999998877
Q ss_pred CceEEEEEe-cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec-CCCCceecccc
Q 006178 433 FTRMLVFDY-ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT-EDFSPKLVDFD 510 (658)
Q Consensus 433 ~~~~lv~E~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFG 510 (658)
..++|||| +.+++|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++ +++.+||+|||
T Consensus 112 -~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~dfg 185 (312)
T 2iwi_A 112 -GFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLIDFG 185 (312)
T ss_dssp --CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEECCCS
T ss_pred -eEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEEEcc
Confidence 67999999 78999999998644 489999999999999999999999 999999999999999 88999999999
Q ss_pred chhhhhhcCCCCCCcccccCccccCCcccccCCCC-ccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccc
Q 006178 511 SWKTILARSEKNPGTLGSQGAICILPSSLEARHLD-VQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMS 589 (658)
Q Consensus 511 la~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~-~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 589 (658)
+++...... .....++..|+|||.+.+..+. .++||||||+++|||++|+.||.... .... ..
T Consensus 186 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~~~~----~~---- 249 (312)
T 2iwi_A 186 SGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ----EILE----AE---- 249 (312)
T ss_dssp SCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----HHHH----TC----
T ss_pred hhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH----HHhh----hc----
Confidence 987653221 1222345679999999877764 59999999999999999999995321 1111 00
Q ss_pred cccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 590 YVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
..++...+..+.+++.+||+.||++|||+.|+++.
T Consensus 250 -------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 250 -------LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp -------CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -------cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01122234568899999999999999999999984
No 242
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=319.22 Aligned_cols=249 Identities=17% Similarity=0.192 Sum_probs=174.7
Q ss_pred hcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+.||+|+||.||+|++. +++.||+|.+..... .....+.+..+..+++.++||||+++++++.+.+ ..++|||
T Consensus 29 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~--~~~lv~e 104 (318)
T 2dyl_A 29 NLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN--KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNT--DVFIAME 104 (318)
T ss_dssp EEEEC------CEEEEEETTTCCEEEEEEEETTSC--HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEEC
T ss_pred ccceeeecCCeeEEEEEEecCCeEEEEEEeccccc--chHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC--cEEEEEe
Confidence 3478999999999999986 678999998854322 1222334555556788889999999999999877 7899999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHT-ELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
|+ ++.+..+.... ...+++..+..++.|+++||+|||+ . +|+||||||+||+++.++.+||+|||++.......
T Consensus 105 ~~-~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 105 LM-GTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CC-SEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred cc-CCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 99 54555554432 2358999999999999999999998 6 89999999999999999999999999987654322
Q ss_pred CCCCCcccccCccccCCcccc-----cCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 520 EKNPGTLGSQGAICILPSSLE-----ARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~-----~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
. .....++..|+|||.+. ...++.++|||||||++|||+||+.||.........+........... +
T Consensus 180 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-----~ 251 (318)
T 2dyl_A 180 A---KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLL-----P 251 (318)
T ss_dssp ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCC-----C
T ss_pred c---ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCC-----C
Confidence 1 11223456799999984 456889999999999999999999999754433222222111111100 0
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
.. ...+..+.+++.+||+.||.+|||+.|+++.
T Consensus 252 ~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 252 GH----MGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp SS----SCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cc----CCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00 1123568899999999999999999999864
No 243
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.3e-37 Score=329.01 Aligned_cols=259 Identities=19% Similarity=0.188 Sum_probs=194.6
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-----------CCCccceeeEE
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-----------HENTGKLLGYC 427 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----------H~nIv~l~~~~ 427 (658)
+.+.+.||+|+||.||+|++. +++.||+|.+... ....+.+.+|+.++++++ ||||+++++++
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~ 95 (373)
T 1q8y_A 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 95 (373)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred EEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-----ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence 344589999999999999975 6788999987422 223456889999999886 89999999998
Q ss_pred ecCCC--CceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeec------
Q 006178 428 RESSP--FTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLT------ 499 (658)
Q Consensus 428 ~~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~------ 499 (658)
...++ ...++||||+ +++|.+++.......+++..+..++.||+.||+|||+++ +|+||||||+|||++
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 96 NHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTT
T ss_pred hccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCc
Confidence 75432 2579999999 889999998765556999999999999999999999953 899999999999995
Q ss_pred CCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCc------
Q 006178 500 EDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGN------ 573 (658)
Q Consensus 500 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~------ 573 (658)
..+.+||+|||+++...... ....++..|+|||.+.+..++.++|||||||++|||+||+.||......
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEHY-----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TEEEEEECCCTTCEETTBCC-----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred CcceEEEcccccccccCCCC-----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 34479999999987654321 1223466799999999999999999999999999999999999754311
Q ss_pred --HHHHHHHhhcCC-----------------cccccccC----------CcCCCCCHHHHHHHHHHHHHccCCCCCCCCC
Q 006178 574 --LVDWAKDYLELP-----------------EVMSYVVD----------PELKHFSYDDLKVICEVVNLCVNPDITKRPS 624 (658)
Q Consensus 574 --~~~~~~~~~~~~-----------------~~~~~~~~----------~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs 624 (658)
+..........+ .....+.. .....++...+..+.+|+.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 111111000000 00000000 0011345677889999999999999999999
Q ss_pred HHHHHHH
Q 006178 625 MQELCTM 631 (658)
Q Consensus 625 ~~evl~~ 631 (658)
+.|+++.
T Consensus 328 ~~ell~h 334 (373)
T 1q8y_A 328 AGGLVNH 334 (373)
T ss_dssp HHHHHTC
T ss_pred HHHHhhC
Confidence 9999874
No 244
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1e-37 Score=335.08 Aligned_cols=244 Identities=16% Similarity=0.194 Sum_probs=180.7
Q ss_pred cccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEEe
Q 006178 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.+.||+|+||+||.....+++.||||++...... .+.+|+++++++ +|||||++++++.+.. ..++||||
T Consensus 29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~-------~~~~E~~~l~~l~~HpnIv~l~~~~~~~~--~~~lv~E~ 99 (432)
T 3p23_A 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS-------FADREVQLLRESDEHPNVIRYFCTEKDRQ--FQYIAIEL 99 (432)
T ss_dssp EEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE-------ECHHHHHHHHHSCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred CCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH-------HHHHHHHHHHhccCCCCcCeEEEEEecCC--EEEEEEEC
Confidence 3789999999976555667899999998532211 245799999999 8999999999998877 78999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC-----CCCceeccccchhhhh
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE-----DFSPKLVDFDSWKTIL 516 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~-----~~~~kl~DFGla~~~~ 516 (658)
+. |+|.+++..... ...+.++..++.||++||+|||++ +|+||||||+|||++. ...+||+|||+|+.+.
T Consensus 100 ~~-g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~ 174 (432)
T 3p23_A 100 CA-ATLQEYVEQKDF-AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174 (432)
T ss_dssp CS-EEHHHHHHSSSC-CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred CC-CCHHHHHHhcCC-CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence 96 699999986543 355556789999999999999999 9999999999999953 2357799999998764
Q ss_pred hcCCC-CCCcccccCccccCCcccc---cCCCCccccchhhHHHHHHHHh-CCCCCCCCCCcHHHHHHHhhcCCcccccc
Q 006178 517 ARSEK-NPGTLGSQGAICILPSSLE---ARHLDVQGNIYAFGVLLLEIIS-GRPPCCKDKGNLVDWAKDYLELPEVMSYV 591 (658)
Q Consensus 517 ~~~~~-~~~~~~~~~~~~~aPE~~~---~~~~~~ksDVwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (658)
..... .......++..|+|||++. ...++.++|||||||++|||+| |..||........... ... .
T Consensus 175 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~---~~~-~----- 245 (432)
T 3p23_A 175 VGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL---LGA-C----- 245 (432)
T ss_dssp -----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHH---TTC-C-----
T ss_pred CCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHH---hcc-C-----
Confidence 32211 1122234567799999997 4567889999999999999999 9999864433222111 110 0
Q ss_pred cCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 592 VDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
..............+.+|+.+||+.||++|||+.||++
T Consensus 246 -~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 246 -SLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp -CCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -CccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 00111112344566889999999999999999999984
No 245
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=5.3e-37 Score=311.53 Aligned_cols=230 Identities=14% Similarity=0.082 Sum_probs=180.3
Q ss_pred hhcccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 361 DFSNIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 361 ~f~~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
.+.+.||+|+||.||+|++.. ++.||+|.+..... ......+.+.+|+.++.+++||||+++++++.+.+ ..|+||
T Consensus 34 ~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 110 (286)
T 3uqc_A 34 RLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGV-LPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA--GGLVVA 110 (286)
T ss_dssp EEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCC-SCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred EEEEEEcccCCeEEEEEEecCCCceEEEEEECcccc-cCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC--cEEEEE
Confidence 345889999999999999864 78899998754322 22334567999999999999999999999999877 789999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++++|.+++..+ ....++.+|+.|++.||+|||++ +|+||||||+|||+++++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~--------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA--------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC---------
T ss_pred EecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc---------
Confidence 999999999999643 35667899999999999999999 99999999999999999999998664
Q ss_pred CCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCC--
Q 006178 520 EKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELK-- 597 (658)
Q Consensus 520 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 597 (658)
|++ .++.++|||||||++|||+||+.||....... ..............
T Consensus 175 -------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~---------~~~~~~~~~~~~~~~~ 225 (286)
T 3uqc_A 175 -------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRS---------GLAPAERDTAGQPIEP 225 (286)
T ss_dssp -------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCC---------CSEECCBCTTSCBCCH
T ss_pred -------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcch---------hhHHHHHHhccCCCCh
Confidence 222 36889999999999999999999997543210 00000000111100
Q ss_pred -CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccCCC
Q 006178 598 -HFSYDDLKVICEVVNLCVNPDITKRPSMQELCTMLEGRIDTS 639 (658)
Q Consensus 598 -~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 639 (658)
......+..+.+++.+||+.||++| |+.|+++.|+++....
T Consensus 226 ~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 226 ADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp HHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred hhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 0112344678899999999999999 9999999999987644
No 246
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1e-36 Score=312.03 Aligned_cols=221 Identities=15% Similarity=0.226 Sum_probs=174.1
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHH-HhccCCCccceeeEEec----CCCCceEE
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADL-ARINHENTGKLLGYCRE----SSPFTRML 437 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l-~~l~H~nIv~l~~~~~~----~~~~~~~l 437 (658)
+.||+|+||.||+|.+. +++.||+|.+.. ...+.+|+.++ +..+||||+++++++.. .. ..++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~--~~~l 92 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD---------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRK--CLLI 92 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC---------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE--EEEE
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecc---------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc--eEEE
Confidence 67999999999999985 678899998732 13467899988 55599999999999876 33 6899
Q ss_pred EEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecC---CCCceeccccchhh
Q 006178 438 VFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTE---DFSPKLVDFDSWKT 514 (658)
Q Consensus 438 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~ 514 (658)
||||+++|+|.+++.......+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||++..
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 169 (299)
T 3m2w_A 93 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 169 (299)
T ss_dssp EECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccccc
Confidence 99999999999999876655799999999999999999999999 9999999999999998 78899999998754
Q ss_pred hhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 515 ILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
.. +..++.++|||||||++|||+||+.||........ . ..........
T Consensus 170 ~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~------~--~~~~~~~~~~ 217 (299)
T 3m2w_A 170 TT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI------S--PGMKTRIRMG 217 (299)
T ss_dssp CT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC---------------CCSCCSSCTT
T ss_pred cc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh------h--HHHHHHHhhc
Confidence 21 24567899999999999999999999965322100 0 0000111111
Q ss_pred cCCCCC----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006178 595 ELKHFS----YDDLKVICEVVNLCVNPDITKRPSMQELCTM 631 (658)
Q Consensus 595 ~~~~~~----~~~~~~~~~li~~cl~~dP~~RPs~~evl~~ 631 (658)
....+ ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 218 -~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 218 -QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp -CCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -cccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 11122 1235678999999999999999999999974
No 247
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2.8e-37 Score=341.85 Aligned_cols=270 Identities=17% Similarity=0.168 Sum_probs=199.9
Q ss_pred hhhcccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecC----CCCc
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRES----SPFT 434 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~----~~~~ 434 (658)
+.+.+.||+|+||.||+|.+. +++.||+|.+... ......+.+.+|++++++++||||+++++++... ....
T Consensus 16 Y~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~---~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE---LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp -CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC---CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc---CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 445689999999999999985 5788999987432 1234456799999999999999999999987651 1226
Q ss_pred eEEEEEecCCCChhhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC---ceecccc
Q 006178 435 RMLVFDYASNGTLYEHLHYGE-RCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS---PKLVDFD 510 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFG 510 (658)
.++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 799999999999999998643 23589999999999999999999999 9999999999999997765 8999999
Q ss_pred chhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCC---cc
Q 006178 511 SWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELP---EV 587 (658)
Q Consensus 511 la~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~---~~ 587 (658)
+++....... .....++..|+|||.+.+..++.++|||||||++|||+||+.||..... ...|........ ..
T Consensus 170 ~a~~~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-~~~~~~~i~~~~~~~~~ 245 (676)
T 3qa8_A 170 YAKELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ-PVQWHGKVREKSNEHIV 245 (676)
T ss_dssp CCCBTTSCCC---CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH-HHHSSTTCC------CC
T ss_pred cccccccccc---cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc-hhhhhhhhhcccchhhh
Confidence 9986543221 1223456679999999999999999999999999999999999965321 111111100000 00
Q ss_pred ccccc------C---CcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHH-----HHHHHhhccCCC
Q 006178 588 MSYVV------D---PELKHFSYDDLKVICEVVNLCVNPDITKRPSMQE-----LCTMLEGRIDTS 639 (658)
Q Consensus 588 ~~~~~------~---~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~e-----vl~~L~~~~~~~ 639 (658)
..... . +.........+..+.+++.+||+.||++|||+.| ..+.++.+....
T Consensus 246 ~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k 311 (676)
T 3qa8_A 246 VYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK 311 (676)
T ss_dssp SCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred hhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence 00000 0 1112234557788999999999999999999987 556666665543
No 248
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.1e-36 Score=342.76 Aligned_cols=240 Identities=15% Similarity=0.208 Sum_probs=186.3
Q ss_pred hhhcccccCCCCeeEEEEEec--CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEecCCCC---c
Q 006178 360 EDFSNIIGSSPDSLVYKGTMK--GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRESSPF---T 434 (658)
Q Consensus 360 ~~f~~~lG~G~~g~Vy~~~~~--~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~---~ 434 (658)
+.+.+.||+|+||.||+|++. +++.||+|++.... .....+.+.+|++++++++||||+++++++.+.+.. .
T Consensus 82 y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 82 YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG---DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp EEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC---CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred eEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC---CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 334589999999999999986 57889999874322 223456789999999999999999999999876521 1
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhh
Q 006178 435 RMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKT 514 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~ 514 (658)
.|+||||+++++|.+++.. .+++.+++.|+.||+.||+|||++ +|+||||||+|||++++ .+||+|||+++.
T Consensus 159 ~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~ 230 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSR 230 (681)
T ss_dssp EEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred eEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchh
Confidence 6999999999999988754 499999999999999999999999 99999999999999986 899999999876
Q ss_pred hhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCCCCCCcHHHHHHHhhcCCcccccccCC
Q 006178 515 ILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDP 594 (658)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (658)
.... ....++..|+|||++.+.. +.++|||||||++|||++|..||..... ... ..
T Consensus 231 ~~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~----------------~~~-~~ 286 (681)
T 2pzi_A 231 INSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV----------------DGL-PE 286 (681)
T ss_dssp TTCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC----------------SSC-CT
T ss_pred cccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc----------------ccc-cc
Confidence 5322 2223556799999987654 8999999999999999999988753110 000 00
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHHHhhcc
Q 006178 595 ELKHFSYDDLKVICEVVNLCVNPDITKRPS-MQELCTMLEGRI 636 (658)
Q Consensus 595 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs-~~evl~~L~~~~ 636 (658)
.......+..+.+++.+||+.||++||+ ++++.+.|..+.
T Consensus 287 --~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 287 --DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp --TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred --cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 0011223467889999999999999995 666777666543
No 249
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=2.1e-36 Score=315.03 Aligned_cols=242 Identities=13% Similarity=0.052 Sum_probs=179.0
Q ss_pred HhhhcccccCCCCeeEEEEEecCCCeEEEEEEeeeccc----cchhhHHHHHHHHHHHHhcc---------CCCccceee
Q 006178 359 CEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH----WTGYLELYFQREVADLARIN---------HENTGKLLG 425 (658)
Q Consensus 359 ~~~f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~----~~~~~~~~~~~E~~~l~~l~---------H~nIv~l~~ 425 (658)
.+.+.+.||+|+||.||+|++ +++.||+|++...... ......+.+.+|+.++++++ |||||++.+
T Consensus 21 ~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~ 99 (336)
T 2vuw_A 21 KLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNS 99 (336)
T ss_dssp HHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEE
T ss_pred cchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcc
Confidence 344568999999999999998 6789999998765321 12223467889999999986 555555555
Q ss_pred E-----------------Eec-------------CCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHH
Q 006178 426 Y-----------------CRE-------------SSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGL 475 (658)
Q Consensus 426 ~-----------------~~~-------------~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL 475 (658)
+ +.+ .+ ..++||||+++|++.+.+.+ ..+++..++.|+.||+.||
T Consensus 100 ~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~--~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 100 VHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDD--QLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTT--CEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHH
T ss_pred eeEecCCCcHHHHHHHHHHhhhccccccCccccccC--eEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHH
Confidence 4 332 33 78999999999987777643 2489999999999999999
Q ss_pred HHhh-hcCCCCeeeccCCCcceeecCCC--------------------CceeccccchhhhhhcCCCCCCcccccCcccc
Q 006178 476 KYLH-TELGPPFTISELNSSAVYLTEDF--------------------SPKLVDFDSWKTILARSEKNPGTLGSQGAICI 534 (658)
Q Consensus 476 ~yLH-~~~~~~ivHrDlkp~NILl~~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~ 534 (658)
+||| ++ +|+||||||+|||++.++ .+||+|||+|+..... ...++..|+
T Consensus 175 ~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y~ 244 (336)
T 2vuw_A 175 AVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVSM 244 (336)
T ss_dssp HHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCTT
T ss_pred HHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeeccc
Confidence 9999 88 999999999999999887 8999999999865321 224567799
Q ss_pred CCcccccCCCCccccchhhHHH-HHHHHhCCCCCCCCCCcHHHHHHHhhcCCccccc--ccCCcCCCCCHHHHHHHHHHH
Q 006178 535 LPSSLEARHLDVQGNIYAFGVL-LLEIISGRPPCCKDKGNLVDWAKDYLELPEVMSY--VVDPELKHFSYDDLKVICEVV 611 (658)
Q Consensus 535 aPE~~~~~~~~~ksDVwS~Gvv-l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li 611 (658)
|||.+.+.. +.++||||+|++ .+++++|..||.. ..|....... .... .............+.++.+|+
T Consensus 245 aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~-----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~~~dli 316 (336)
T 2vuw_A 245 DEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN-----VLWLHYLTDK--MLKQMTFKTKCNTPAMKQIKRKIQEFH 316 (336)
T ss_dssp CSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH-----HHHHHHHHHH--HHHTCCCSSCCCSHHHHHHHHHHHHHH
T ss_pred ChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc-----hhhhhHHHHh--hhhhhccCcccchhhhhhcCHHHHHHH
Confidence 999998766 899999998777 7889999999832 1121111000 0000 000111112346778899999
Q ss_pred HHccCCCCCCCCCHHHHH
Q 006178 612 NLCVNPDITKRPSMQELC 629 (658)
Q Consensus 612 ~~cl~~dP~~RPs~~evl 629 (658)
.+||+.| |++|++
T Consensus 317 ~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 317 RTMLNFS-----SATDLL 329 (336)
T ss_dssp HHGGGSS-----SHHHHH
T ss_pred HHHhccC-----CHHHHH
Confidence 9999976 898887
No 250
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=7.3e-36 Score=319.39 Aligned_cols=240 Identities=12% Similarity=0.094 Sum_probs=174.6
Q ss_pred cccccCCCCeeEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccC-CCcccee---------eE-----
Q 006178 363 SNIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH-ENTGKLL---------GY----- 426 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H-~nIv~l~---------~~----- 426 (658)
.+.||+|+||.||+|++. +|+.||||++...... .....+.+.+|+.+++.++| +|...+. +.
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~-~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCc-cHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCC
Confidence 378999999999999965 6889999987533322 22335679999999999977 3221111 11
Q ss_pred -------EecCC---CCceEEEEEecCCCChhhhhc-----cCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccC
Q 006178 427 -------CRESS---PFTRMLVFDYASNGTLYEHLH-----YGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISEL 491 (658)
Q Consensus 427 -------~~~~~---~~~~~lv~E~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDl 491 (658)
+.... ....+++|+++ +++|.+++. ......+++..++.++.||++||+|||++ +|+||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDi 237 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 237 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCc
Confidence 11111 11357777776 679999985 22334588999999999999999999999 9999999
Q ss_pred CCcceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCccc----------ccCCCCccccchhhHHHHHHHH
Q 006178 492 NSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSL----------EARHLDVQGNIYAFGVLLLEII 561 (658)
Q Consensus 492 kp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~----------~~~~~~~ksDVwS~Gvvl~ell 561 (658)
||+|||++.++.+||+|||+++...... ....+ ..|+|||++ ....++.++|||||||++|||+
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~-----~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ell 311 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASA-----VSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW 311 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEE-----CCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHH
T ss_pred ccceEEEecCCeEEEEeccceeecCCcc-----ccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHH
Confidence 9999999999999999999987654331 11122 779999999 5556889999999999999999
Q ss_pred hCCCCCCCCCCcHHHHHHHhhcCCcccccccCCcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006178 562 SGRPPCCKDKGNLVDWAKDYLELPEVMSYVVDPELKHFSYDDLKVICEVVNLCVNPDITKRPSMQELCT 630 (658)
Q Consensus 562 tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~evl~ 630 (658)
||+.||...... .....+.. ..... ++.+.+|+.+||+.||++||++.|+++
T Consensus 312 tg~~Pf~~~~~~------------~~~~~~~~-~~~~~----~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 312 CADLPNTDDAAL------------GGSEWIFR-SCKNI----PQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HSSCCCCTTGGG------------SCSGGGGS-SCCCC----CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HCCCCCCCcchh------------hhHHHHHh-hcccC----CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 999999643211 11111111 11122 356889999999999999999877754
No 251
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.96 E-value=6.6e-30 Score=262.83 Aligned_cols=219 Identities=29% Similarity=0.505 Sum_probs=190.6
Q ss_pred CCchhHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCC--ccceeecCCC--CCEEEEEecCCCCcc--cCCccccCCCCC
Q 006178 23 AFATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCH--WTGIACSDAR--DRVLKINISGSSLKG--FLAPELGLLTYL 96 (658)
Q Consensus 23 ~~~~~~~~~l~~~k~~~~~~~~~~l~~w~~~~~~~c~--w~gv~C~~~~--~~v~~l~L~~n~l~g--~~~~~~~~l~~L 96 (658)
.|.+.|+.||++||+++. +|. .+.+|+. +.+||. |.||+|+... ++|+.|+|++|.++| .+|+.++.+++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~-~~~-~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLG-NPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT-CCG-GGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCCHHHHHHHHHHHHhcC-Ccc-cccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 367889999999999995 665 6899975 568998 9999998543 799999999999999 999999999999
Q ss_pred cEEeccC-CcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCC
Q 006178 97 QELILHG-NNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDR 175 (658)
Q Consensus 97 ~~L~L~~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 175 (658)
++|+|++ |++.+.+|..|+++++|++|+|++|++++.+|..+.++++|++|+|++|.+++.+|..+.++++|++|+|++
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 158 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcC
Confidence 9999995 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcCcccCcccCCCC---CCCccCCCccCC
Q 006178 176 NRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSIPKCLEYL---PSTSFQGNCLQN 246 (658)
Q Consensus 176 N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l~g~ip~~l~~l---~~~~~~~n~~~~ 246 (658)
|+++|.+|..... ....+..++++.|.+++ +..++ |+.|++++|.+++.+|..+..+ ..+++++|.+.+
T Consensus 159 N~l~~~~p~~l~~-l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 235 (313)
T 1ogq_A 159 NRISGAIPDSYGS-FSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235 (313)
T ss_dssp SCCEEECCGGGGC-CCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECC
T ss_pred CcccCcCCHHHhh-hhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceee
Confidence 9999999874332 22367788888888763 44565 9999999999998888776554 456778887764
No 252
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=3.8e-30 Score=284.62 Aligned_cols=190 Identities=14% Similarity=0.066 Sum_probs=130.4
Q ss_pred ccccCCCCeeEEEEEe-cCCCeEEEEEEeeecc------ccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCce
Q 006178 364 NIIGSSPDSLVYKGTM-KGGPEIAVISLCIKEE------HWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTR 435 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~-~~~~~vavk~~~~~~~------~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~ 435 (658)
...+.|++|.+++++. --|+.+++|.+..... .......++|.+|+++|+++ .|+||+++++++++.+ ..
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~--~~ 317 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ--SG 317 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS--EE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC--EE
Confidence 4567788887777653 3578899998864321 11233456799999999999 7999999999999988 88
Q ss_pred EEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhh
Q 006178 436 MLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
||||||++|++|.++|...+ +++.. +|+.||+.||+|+|++ |||||||||+|||+++++.+||+|||+|+..
T Consensus 318 yLVMEyv~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 318 WLVMEKLPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EEEEECCCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EEEEecCCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 99999999999999998654 36654 5899999999999999 9999999999999999999999999999875
Q ss_pred hhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCC
Q 006178 516 LARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566 (658)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p 566 (658)
..... ......+++.|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 390 ~~~~~--~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 390 PQDCS--WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp C---C--CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCCc--cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 43222 1222345677999999875 567889999999999988776554
No 253
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.94 E-value=4.4e-27 Score=271.41 Aligned_cols=214 Identities=24% Similarity=0.362 Sum_probs=164.2
Q ss_pred CchhHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCccceeecCCCCCEEEEEecCCCCccc---CC-------------
Q 006178 24 FATNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGF---LA------------- 87 (658)
Q Consensus 24 ~~~~~~~~l~~~k~~~~~~~~~~l~~w~~~~~~~c~w~gv~C~~~~~~v~~l~L~~n~l~g~---~~------------- 87 (658)
+.+.|+.||++||+++. ||. .+++|+. +.+||+|.||+|+ .++|+.|+|+++.+.|. +|
T Consensus 9 ~~~~~~~all~~k~~~~-~~~-~l~~W~~-~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~ 83 (768)
T 3rgz_A 9 SLYREIHQLISFKDVLP-DKN-LLPDWSS-NKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLF 83 (768)
T ss_dssp CHHHHHHHHHHHHTTCS-CTT-SSTTCCT-TSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEE
T ss_pred CCHHHHHHHHHHHhhCC-Ccc-cccCCCC-CCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcccccC
Confidence 45789999999999997 777 8999974 5689999999998 68999999999999987 54
Q ss_pred ----------ccccCCCCCcEEeccCCcccccCCc--ccCCCCCCCEEEccCCcCCCCCcccc-cCCcccceeecccccC
Q 006178 88 ----------PELGLLTYLQELILHGNNLIGIIPK--ELGLLKRLKILDLGTNQLTGPIPPEI-GNLTGLVKINLQSNGL 154 (658)
Q Consensus 88 ----------~~~~~l~~L~~L~L~~N~l~g~~p~--~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~Ls~N~l 154 (658)
..++.+++|++|+|++|.++|.+|. .++++++|++|||++|.+++.+|..+ .++++|++|+|++|++
T Consensus 84 ~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 163 (768)
T 3rgz_A 84 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSI 163 (768)
T ss_dssp CTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCC
T ss_pred CcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCcc
Confidence 4667778888888888888887777 78888888888888888887777765 6788888888888888
Q ss_pred CCCChhh---hcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc----ccCCCCCcEEEccCCcCcccC
Q 006178 155 TGRLPAE---LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG----LCHLSQLKVADFSYNFFVGSI 227 (658)
Q Consensus 155 ~g~~p~~---~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~----~~~l~~L~~l~ls~N~l~g~i 227 (658)
++..|.. +.++++|++|++++|++++.+|.. ...++..++++.|.+++ +.++++|++|++++|.+++.+
T Consensus 164 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~----~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~ 239 (768)
T 3rgz_A 164 SGANVVGWVLSDGCGELKHLAISGNKISGDVDVS----RCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDF 239 (768)
T ss_dssp EEETHHHHHHTTCCTTCCEEECCSSEEESCCBCT----TCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSCH
T ss_pred CCcCChhhhhhccCCCCCEEECCCCcccccCCcc----cCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCcCCCcc
Confidence 8777776 677777777877777777666542 22456667777776654 456677777777777777777
Q ss_pred cccCCCCC---CCccCCCccCC
Q 006178 228 PKCLEYLP---STSFQGNCLQN 246 (658)
Q Consensus 228 p~~l~~l~---~~~~~~n~~~~ 246 (658)
|..+..++ .+++++|.+.+
T Consensus 240 ~~~l~~l~~L~~L~Ls~n~l~~ 261 (768)
T 3rgz_A 240 SRAISTCTELKLLNISSNQFVG 261 (768)
T ss_dssp HHHTTTCSSCCEEECCSSCCEE
T ss_pred cHHHhcCCCCCEEECCCCcccC
Confidence 76665443 35566665554
No 254
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.93 E-value=1.1e-26 Score=262.22 Aligned_cols=216 Identities=21% Similarity=0.349 Sum_probs=183.0
Q ss_pred hhHHHHHHHHHHhcccCCCC-------CCCCCCCCCCCCCCc---cceeecCCCCCEEEEEecCCCCcccCCccccCCCC
Q 006178 26 TNEFWALTTFKEAIYEDPHL-------VLSNWNALDADPCHW---TGIACSDARDRVLKINISGSSLKGFLAPELGLLTY 95 (658)
Q Consensus 26 ~~~~~~l~~~k~~~~~~~~~-------~l~~w~~~~~~~c~w---~gv~C~~~~~~v~~l~L~~n~l~g~~~~~~~~l~~ 95 (658)
..|+.||.++++++..+... ...+|+. +.+||.| .||+|+. .++|+.|+|++++++|.+|++|++|++
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c~w~~~~GV~C~~-~~~V~~L~L~~~~l~g~lp~~l~~L~~ 106 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELDMWGAQPGVSLNS-NGRVTGLSLEGFGASGRVPDAIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGGGTTCCTTEEECT-TCCEEEEECTTSCCEEEECGGGGGCTT
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCcccccCCCCeEEcC-CCCEEEEEecCcccCCcCChHHhcCcc
Confidence 36899999999998643322 2347985 5789999 9999986 489999999999999999999999999
Q ss_pred CcEEeccCC-----------------------------------------------------------------------
Q 006178 96 LQELILHGN----------------------------------------------------------------------- 104 (658)
Q Consensus 96 L~~L~L~~N----------------------------------------------------------------------- 104 (658)
|++|+|++|
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l 186 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDT 186 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTT
T ss_pred ceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhh
Confidence 999999988
Q ss_pred -------cccccCCcccCCCCCCCEEEccCCcCCCC-----------------Cccccc--CCcccceeecccccCCCCC
Q 006178 105 -------NLIGIIPKELGLLKRLKILDLGTNQLTGP-----------------IPPEIG--NLTGLVKINLQSNGLTGRL 158 (658)
Q Consensus 105 -------~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~-----------------~p~~~~--~l~~L~~L~Ls~N~l~g~~ 158 (658)
+++| +|.+|+++++|++|+|++|+|+|. +|..++ ++++|++|+|++|.+.|.+
T Consensus 187 ~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~ 265 (636)
T 4eco_A 187 QIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKL 265 (636)
T ss_dssp TTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSC
T ss_pred hhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccC
Confidence 4456 899999999999999999999986 999999 9999999999999999999
Q ss_pred hhhhcCCCCCCEEeCCCCC-Ccc-cCCCCCCC----CccccccccccCCCCccc------ccCCCCCcEEEccCCcCccc
Q 006178 159 PAELGNLISLEELHLDRNR-LQG-AVPAGSNS----GYTANIHGMYASSANLTG------LCHLSQLKVADFSYNFFVGS 226 (658)
Q Consensus 159 p~~~~~l~~L~~L~L~~N~-l~g-~~p~~~~~----~~~~~l~~~~l~~n~l~~------~~~l~~L~~l~ls~N~l~g~ 226 (658)
|..|+++++|++|+|++|+ ++| .+|..... ....++..+++++|.++. +.++++|+.|++++|.++|.
T Consensus 266 p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l~g~ 345 (636)
T 4eco_A 266 PTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGK 345 (636)
T ss_dssp CTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCCEEE
T ss_pred hHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcCCcCccc
Confidence 9999999999999999998 998 88864221 012467788888888764 45688999999999999999
Q ss_pred CcccCC---CCCCCccCCCccC
Q 006178 227 IPKCLE---YLPSTSFQGNCLQ 245 (658)
Q Consensus 227 ip~~l~---~l~~~~~~~n~~~ 245 (658)
+| .+. +|..+++++|.+.
T Consensus 346 ip-~~~~l~~L~~L~L~~N~l~ 366 (636)
T 4eco_A 346 LP-AFGSEIKLASLNLAYNQIT 366 (636)
T ss_dssp CC-CCEEEEEESEEECCSSEEE
T ss_pred hh-hhCCCCCCCEEECCCCccc
Confidence 99 664 4556778888766
No 255
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=3.7e-27 Score=259.25 Aligned_cols=187 Identities=11% Similarity=0.065 Sum_probs=144.0
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeecccc----chhhHHHHHHHHHHHHhccCCCccceeeEEecCCCCceEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHW----TGYLELYFQREVADLARINHENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.||+|+||.||+|.. .+..+++|+...+.... .....+++.+|++++++++||||+++..++...+ ..++||
T Consensus 342 ~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~--~~~lVm 418 (540)
T 3en9_A 342 HLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD--NKRIMM 418 (540)
T ss_dssp ------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT--TTEEEE
T ss_pred CEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC--ccEEEE
Confidence 6899999999999954 46788998876543221 1122456899999999999999996666666555 569999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcC
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARS 519 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~ 519 (658)
||+++|+|.+++.. +..++.|+++||+|||++ +|+||||||+|||+++ .+||+|||+|+......
T Consensus 419 E~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 419 SYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp ECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred ECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 99999999999974 568999999999999999 9999999999999998 99999999998753221
Q ss_pred CCC-----CCcccccCccccCCccccc--CCCCccccchhhHHHHHHHHhCCCCCC
Q 006178 520 EKN-----PGTLGSQGAICILPSSLEA--RHLDVQGNIYAFGVLLLEIISGRPPCC 568 (658)
Q Consensus 520 ~~~-----~~~~~~~~~~~~aPE~~~~--~~~~~ksDVwS~Gvvl~elltG~~p~~ 568 (658)
... ......++..|||||++.. ..|+..+|+||..+-.++-+.++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 110 0012234667899999987 668889999999999999998887763
No 256
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.93 E-value=4.3e-26 Score=262.10 Aligned_cols=212 Identities=22% Similarity=0.304 Sum_probs=178.7
Q ss_pred chhHHHHHHHHHHhcccCCCCCCCCCCCCC----CCC--CCc------------cceeecCCCCCEEEEEecCCCCcccC
Q 006178 25 ATNEFWALTTFKEAIYEDPHLVLSNWNALD----ADP--CHW------------TGIACSDARDRVLKINISGSSLKGFL 86 (658)
Q Consensus 25 ~~~~~~~l~~~k~~~~~~~~~~l~~w~~~~----~~~--c~w------------~gv~C~~~~~~v~~l~L~~n~l~g~~ 86 (658)
...|+.||++||+++. +| +|+..+ .+| |.| .||+|+. .++|+.|+|++++++|.+
T Consensus 267 ~~~d~~ALl~~k~~l~-~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~i 339 (876)
T 4ecn_A 267 YIKDYKALKAIWEALD-GK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRV 339 (876)
T ss_dssp HHHHHHHHHHHHHHTT-GG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEE
T ss_pred chHHHHHHHHHHHHcC-CC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcC
Confidence 3468999999999995 44 786543 456 999 9999986 689999999999999999
Q ss_pred CccccCCCCCcEEec-cCCccccc--------------------------------------------------------
Q 006178 87 APELGLLTYLQELIL-HGNNLIGI-------------------------------------------------------- 109 (658)
Q Consensus 87 ~~~~~~l~~L~~L~L-~~N~l~g~-------------------------------------------------------- 109 (658)
|++|++|++|+.|+| ++|.++|.
T Consensus 340 p~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~ 419 (876)
T 4ecn_A 340 PDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKK 419 (876)
T ss_dssp CGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCC
T ss_pred chHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccc
Confidence 999999999999999 77766555
Q ss_pred --------------------CCcccCCCCCCCEEEccCCcCCC-----------------CCccccc--CCcccceeecc
Q 006178 110 --------------------IPKELGLLKRLKILDLGTNQLTG-----------------PIPPEIG--NLTGLVKINLQ 150 (658)
Q Consensus 110 --------------------~p~~~~~l~~L~~L~Ls~N~l~g-----------------~~p~~~~--~l~~L~~L~Ls 150 (658)
+|..|++|++|++|+|++|+|+| .+|..++ ++++|+.|+|+
T Consensus 420 ~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls 499 (876)
T 4ecn_A 420 DSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELY 499 (876)
T ss_dssp CCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred ccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECc
Confidence 88899999999999999999998 3999988 99999999999
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCC-Ccc-cCCCCCCC-----CccccccccccCCCCccc------ccCCCCCcEEE
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNR-LQG-AVPAGSNS-----GYTANIHGMYASSANLTG------LCHLSQLKVAD 217 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~-l~g-~~p~~~~~-----~~~~~l~~~~l~~n~l~~------~~~l~~L~~l~ 217 (658)
+|.+.|.+|..|++|++|++|+|++|+ ++| .+|..... ....++..+++++|.++. +.++++|+.|+
T Consensus 500 ~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L~~L~~L~ 579 (876)
T 4ecn_A 500 NCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLD 579 (876)
T ss_dssp SCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTCTTCCEEE
T ss_pred CCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhhcCCCCCEEE
Confidence 999999999999999999999999998 998 78863211 112367778888888754 45678899999
Q ss_pred ccCCcCcccCcccCCCC---CCCccCCCccC
Q 006178 218 FSYNFFVGSIPKCLEYL---PSTSFQGNCLQ 245 (658)
Q Consensus 218 ls~N~l~g~ip~~l~~l---~~~~~~~n~~~ 245 (658)
|++|.++ .+| .+..+ ..+.+++|.+.
T Consensus 580 Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~ 608 (876)
T 4ecn_A 580 CVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE 608 (876)
T ss_dssp CTTSCCC-BCC-CCCTTSEESEEECCSSCCS
T ss_pred CCCCCcc-cch-hhcCCCcceEEECcCCccc
Confidence 9999998 888 66554 45677888766
No 257
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.93 E-value=3.3e-26 Score=236.67 Aligned_cols=219 Identities=17% Similarity=0.241 Sum_probs=186.1
Q ss_pred CchhHHHHHHHHHHhcccCCCCCCCCCC---CCCCCCCCccceeecC--------CCCCEEEEEecCCCCcccCCccccC
Q 006178 24 FATNEFWALTTFKEAIYEDPHLVLSNWN---ALDADPCHWTGIACSD--------ARDRVLKINISGSSLKGFLAPELGL 92 (658)
Q Consensus 24 ~~~~~~~~l~~~k~~~~~~~~~~l~~w~---~~~~~~c~w~gv~C~~--------~~~~v~~l~L~~n~l~g~~~~~~~~ 92 (658)
+..+|+.||++||+.+..|+.+.+.+|. ....++|.|.|+.|.. ...+|+.|+|++|.++ .+|+.++.
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~ 102 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFR 102 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGG
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhh
Confidence 5568899999999999778877778894 3456899999999952 2468999999999998 68889999
Q ss_pred CCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcC--------
Q 006178 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGN-------- 164 (658)
Q Consensus 93 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-------- 164 (658)
+++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|..++.
T Consensus 103 l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~ 180 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQ 180 (328)
T ss_dssp GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEE
T ss_pred CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhc
Confidence 999999999999999 89999999999999999999999 88999999999999999999999999988765
Q ss_pred -CCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc----ccCCCCCcEEEccCCcCcccCcccCCCCC---C
Q 006178 165 -LISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG----LCHLSQLKVADFSYNFFVGSIPKCLEYLP---S 236 (658)
Q Consensus 165 -l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~----~~~l~~L~~l~ls~N~l~g~ip~~l~~l~---~ 236 (658)
+++|++|+|++|+++ .+|.... ...++..+++++|.+++ +..+++|+.|++++|++.+.+|..+..++ .
T Consensus 181 ~l~~L~~L~L~~n~l~-~lp~~l~--~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~ 257 (328)
T 4fcg_A 181 GLVNLQSLRLEWTGIR-SLPASIA--NLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKR 257 (328)
T ss_dssp ESTTCCEEEEEEECCC-CCCGGGG--GCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCE
T ss_pred cCCCCCEEECcCCCcC-cchHhhc--CCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCE
Confidence 999999999999998 7776422 23577788888888875 45688999999999999999998876654 4
Q ss_pred CccCCCccCCCC
Q 006178 237 TSFQGNCLQNKD 248 (658)
Q Consensus 237 ~~~~~n~~~~~~ 248 (658)
+++++|.+.+..
T Consensus 258 L~L~~n~~~~~~ 269 (328)
T 4fcg_A 258 LILKDCSNLLTL 269 (328)
T ss_dssp EECTTCTTCCBC
T ss_pred EECCCCCchhhc
Confidence 677777655543
No 258
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=1.3e-23 Score=211.83 Aligned_cols=133 Identities=11% Similarity=0.089 Sum_probs=107.2
Q ss_pred cccccCCCCeeEEEEEecCCCeEEEEEEeeeccccc--------------hhhHHHHHHHHHHHHhccCCCccceeeEEe
Q 006178 363 SNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWT--------------GYLELYFQREVADLARINHENTGKLLGYCR 428 (658)
Q Consensus 363 ~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~--------------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 428 (658)
.+.||+|+||.||+|++.+|+.||+|.+........ ......+.+|++++++++ | +++.+++.
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~ 171 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA 171 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence 389999999999999997789999998854321100 023467899999999999 5 67777654
Q ss_pred cCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceecc
Q 006178 429 ESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVD 508 (658)
Q Consensus 429 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~D 508 (658)
. + ..++||||+++|+|.+ +.. .....++.|++.||+|||+. +|+||||||+|||++ ++.+||+|
T Consensus 172 ~-~--~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~D 235 (282)
T 1zar_A 172 W-E--GNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWIID 235 (282)
T ss_dssp E-E--TTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEECC
T ss_pred c-c--ceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEEE
Confidence 4 3 4599999999999998 431 22447999999999999999 999999999999999 99999999
Q ss_pred ccchhh
Q 006178 509 FDSWKT 514 (658)
Q Consensus 509 FGla~~ 514 (658)
||+|+.
T Consensus 236 FG~a~~ 241 (282)
T 1zar_A 236 FPQSVE 241 (282)
T ss_dssp CTTCEE
T ss_pred CCCCeE
Confidence 998864
No 259
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.86 E-value=1.1e-20 Score=189.71 Aligned_cols=174 Identities=22% Similarity=0.239 Sum_probs=108.3
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
.++.|+|++|.+++..+..|..+++|++|+|++|.++...+..|.++++|++|+|++|++++..+..+..+++|++|+|+
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 45667777777766555567777777777777777765545555667777777777777765545556667777777777
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcCcc
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l~g 225 (658)
+|.+++..|..|.++++|++|+|++|++++ +|..... ...++..+++++|.++. +..+++|+.|++++|.+++
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPKGVFD-KLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKR 195 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTT-TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCc-cCHhHcc-CCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCc
Confidence 777776666666777777777777777763 3332111 12455666666666553 3345667777777777765
Q ss_pred cCcccCC---CCCCCccCCCccCC
Q 006178 226 SIPKCLE---YLPSTSFQGNCLQN 246 (658)
Q Consensus 226 ~ip~~l~---~l~~~~~~~n~~~~ 246 (658)
..+..+. +|..+++.+|.+..
T Consensus 196 ~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 196 VPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCHHHhccccCCCEEEecCCCeeC
Confidence 4443343 33445566665544
No 260
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.85 E-value=1.4e-21 Score=225.48 Aligned_cols=115 Identities=37% Similarity=0.550 Sum_probs=98.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|+|++|.++|.+|..++.+++|++|+|++|+++|.+|..+.++++|++|+|++|+++|.+|..++.+++|+.|+|
T Consensus 442 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 521 (768)
T 3rgz_A 442 SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKL 521 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEEC
T ss_pred CCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEEC
Confidence 46788888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCC
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~ 184 (658)
++|+++|.+|..++++++|+.|+|++|+++|.+|.
T Consensus 522 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~ 556 (768)
T 3rgz_A 522 SNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 556 (768)
T ss_dssp CSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCG
T ss_pred CCCcccCcCCHHHcCCCCCCEEECCCCccCCcCCh
Confidence 88888888888888888888888888888888775
No 261
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=4.9e-21 Score=184.31 Aligned_cols=176 Identities=20% Similarity=0.241 Sum_probs=144.9
Q ss_pred CCCccceeecCC---------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccC
Q 006178 57 PCHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (658)
Q Consensus 57 ~c~w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~ 127 (658)
.|.|.+|.|+.. ..+++.|+|++|.+++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 6 ~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 6 SCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 478999999742 23689999999999987777789999999999999999987777789999999999999
Q ss_pred CcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccc
Q 006178 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207 (658)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~ 207 (658)
|++++..+..+..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+... . ...++..+++++|.+.+
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~-~-~l~~L~~L~l~~N~~~~- 162 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVF-D-RLTSLQYIWLHDNPWDC- 162 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTT-T-TCTTCCEEECCSCCBCC-
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHh-c-cCCCccEEEecCCCeec-
Confidence 99997666678999999999999999998777778999999999999999995444221 1 12466777888886653
Q ss_pred cCCCCCcEEEccCCcCcccCcccCCCCCC
Q 006178 208 CHLSQLKVADFSYNFFVGSIPKCLEYLPS 236 (658)
Q Consensus 208 ~~l~~L~~l~ls~N~l~g~ip~~l~~l~~ 236 (658)
.+++|+.|+++.|+++|.+|..++.++.
T Consensus 163 -~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 -TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp -CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred -CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 4567888888888888888887776654
No 262
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.84 E-value=2.2e-20 Score=185.28 Aligned_cols=184 Identities=20% Similarity=0.244 Sum_probs=126.5
Q ss_pred CCCCccceeecCCCCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCc
Q 006178 56 DPCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135 (658)
Q Consensus 56 ~~c~w~gv~C~~~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p 135 (658)
+||.|.|.+|.. ..+.++++++.++. +|..+. +.|+.|+|++|++++..|..|.++++|++|+|++|++++..|
T Consensus 3 ~Cp~~~gC~C~~---~~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 3 TCETVTGCTCNE---GKKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp -CHHHHSSEEEG---GGTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCC---CCeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 477888888842 23457777777764 454443 567777777777777666677777777777777777776666
Q ss_pred ccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCC
Q 006178 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHL 210 (658)
Q Consensus 136 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l 210 (658)
..+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+. ... ....+..+++++|.+++ +..+
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l 154 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSG-VFD-RLTKLKELRLNTNQLQSIPAGAFDKL 154 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT-TTT-TCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChh-Hhc-cCCcccEEECcCCcCCccCHHHcCcC
Confidence 6677777777777777777766666677777777777777777743332 111 12456666777776654 4467
Q ss_pred CCCcEEEccCCcCcccCcccCCC---CCCCccCCCccCCC
Q 006178 211 SQLKVADFSYNFFVGSIPKCLEY---LPSTSFQGNCLQNK 247 (658)
Q Consensus 211 ~~L~~l~ls~N~l~g~ip~~l~~---l~~~~~~~n~~~~~ 247 (658)
++|+.|+|++|++++..|..+.. |..+++.+|.+...
T Consensus 155 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 155 TNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 88999999999998776666654 45567888877654
No 263
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.84 E-value=2.2e-21 Score=199.19 Aligned_cols=174 Identities=26% Similarity=0.399 Sum_probs=136.7
Q ss_pred CCEEEEEecC-CCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 70 DRVLKINISG-SSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 70 ~~v~~l~L~~-n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
.+++.|+|++ |.+.+.+|..|+.+++|++|+|++|++++.+|..|.++++|++|+|++|.+++.+|..++.+++|++|+
T Consensus 76 ~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 155 (313)
T 1ogq_A 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred CCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEE
Confidence 4789999995 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCChhhhcCCC-CCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCc
Q 006178 149 LQSNGLTGRLPAELGNLI-SLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNF 222 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~ 222 (658)
|++|.++|.+|..+++++ +|++|+|++|+++|.+|...... .+..++++.|.+++ +..+++|+.|++++|.
T Consensus 156 L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l---~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 232 (313)
T 1ogq_A 156 FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL---NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNS 232 (313)
T ss_dssp CCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGC---CCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSE
T ss_pred CcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCC---cccEEECcCCcccCcCCHHHhcCCCCCEEECCCCc
Confidence 999999999999999998 99999999999998888643221 25555566555442 3344555555555555
Q ss_pred CcccCcc--cCCCCCCCccCCCccCC
Q 006178 223 FVGSIPK--CLEYLPSTSFQGNCLQN 246 (658)
Q Consensus 223 l~g~ip~--~l~~l~~~~~~~n~~~~ 246 (658)
+++.+|. .+.+|..+++++|.+.+
T Consensus 233 l~~~~~~~~~l~~L~~L~Ls~N~l~~ 258 (313)
T 1ogq_A 233 LAFDLGKVGLSKNLNGLDLRNNRIYG 258 (313)
T ss_dssp ECCBGGGCCCCTTCCEEECCSSCCEE
T ss_pred eeeecCcccccCCCCEEECcCCcccC
Confidence 5544443 12233344455554443
No 264
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=1.4e-19 Score=176.79 Aligned_cols=153 Identities=27% Similarity=0.335 Sum_probs=117.7
Q ss_pred CCCCCCccceeecCC---------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEE
Q 006178 54 DADPCHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILD 124 (658)
Q Consensus 54 ~~~~c~w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 124 (658)
....|+|++|.|+.. ...++.|+|++|.+++..|..|..+++|++|+|++|+|.+..+..|..+++|++|+
T Consensus 15 ~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~ 94 (229)
T 3e6j_A 15 SQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLD 94 (229)
T ss_dssp TTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEE
Confidence 357899999999741 24577888888888887777888888888888888888765556678888888888
Q ss_pred ccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCc
Q 006178 125 LGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204 (658)
Q Consensus 125 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l 204 (658)
|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++ +|..
T Consensus 95 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~-~~~~------------------- 153 (229)
T 3e6j_A 95 LGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKS-IPHG------------------- 153 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCC-CCTT-------------------
T ss_pred CCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCc-cCHH-------------------
Confidence 8888888665666778888888888888888 678888888888888888888874 3321
Q ss_pred ccccCCCCCcEEEccCCcCcccCc
Q 006178 205 TGLCHLSQLKVADFSYNFFVGSIP 228 (658)
Q Consensus 205 ~~~~~l~~L~~l~ls~N~l~g~ip 228 (658)
.+..+++|+.|++++|.+++..+
T Consensus 154 -~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 154 -AFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp -TTTTCTTCCEEECTTSCBCTTBG
T ss_pred -HHhCCCCCCEEEeeCCCccCCcc
Confidence 24456778888888888876544
No 265
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.80 E-value=6e-19 Score=178.53 Aligned_cols=177 Identities=22% Similarity=0.206 Sum_probs=151.4
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCc-CCCCCcccccCCccccee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ-LTGPIPPEIGNLTGLVKI 147 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L 147 (658)
...++.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|. ++...|..+..+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 3578999999999999888889999999999999999999889999999999999999997 776668889999999999
Q ss_pred ecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCc
Q 006178 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNF 222 (658)
Q Consensus 148 ~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~ 222 (658)
+|++|.+++..|..+.++++|++|+|++|++++..+.... ...++..+++++|.+++ +..+++|+.|++++|.
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 188 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFR--DLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNR 188 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT--TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhc--cCCCccEEECCCCcccccCHHHhcCccccCEEECCCCc
Confidence 9999999988888999999999999999999854443221 23577888999998864 5568899999999999
Q ss_pred CcccCcccCCCC---CCCccCCCccCCC
Q 006178 223 FVGSIPKCLEYL---PSTSFQGNCLQNK 247 (658)
Q Consensus 223 l~g~ip~~l~~l---~~~~~~~n~~~~~ 247 (658)
+++..|..+..+ ..+++++|.+...
T Consensus 189 l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 216 (285)
T 1ozn_A 189 VAHVHPHAFRDLGRLMTLYLFANNLSAL 216 (285)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred ccccCHhHccCcccccEeeCCCCcCCcC
Confidence 998888877654 5567888877764
No 266
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.80 E-value=1.7e-19 Score=186.32 Aligned_cols=175 Identities=18% Similarity=0.252 Sum_probs=147.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccC---------
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGN--------- 140 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~--------- 140 (658)
.+++.|+|++|.++ .+|..++.+++|++|+|++|.++ .+|..++++++|++|+|++|++.+.+|..++.
T Consensus 104 ~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp TTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 47889999999999 78999999999999999999999 78999999999999999999998999988765
Q ss_pred CcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcE
Q 006178 141 LTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKV 215 (658)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~ 215 (658)
+++|+.|+|++|+++ .+|..++++++|++|+|++|++++ +|... ....++..+++++|++.+ +..+++|+.
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~ 257 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAI--HHLPKLEELDLRGCTALRNYPPIFGGRAPLKR 257 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGG--GGCTTCCEEECTTCTTCCBCCCCTTCCCCCCE
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchhh--ccCCCCCEEECcCCcchhhhHHHhcCCCCCCE
Confidence 999999999999999 889999999999999999999985 55421 223567788888887653 567889999
Q ss_pred EEccCCcCcccCcccCCCC---CCCccCCCccCCCCcc
Q 006178 216 ADFSYNFFVGSIPKCLEYL---PSTSFQGNCLQNKDPK 250 (658)
Q Consensus 216 l~ls~N~l~g~ip~~l~~l---~~~~~~~n~~~~~~~~ 250 (658)
|++++|++.+.+|..+.++ ..+++++|.+.+..|.
T Consensus 258 L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~ 295 (328)
T 4fcg_A 258 LILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPS 295 (328)
T ss_dssp EECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCG
T ss_pred EECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccH
Confidence 9999999999999876554 4567888877665543
No 267
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.80 E-value=8.7e-20 Score=181.60 Aligned_cols=138 Identities=14% Similarity=0.216 Sum_probs=104.4
Q ss_pred hcccccCCCCeeEEEEEe-cCCCe--EEEEEEeeecccc--------------------chhhHHHHHHHHHHHHhccCC
Q 006178 362 FSNIIGSSPDSLVYKGTM-KGGPE--IAVISLCIKEEHW--------------------TGYLELYFQREVADLARINHE 418 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~-~~~~~--vavk~~~~~~~~~--------------------~~~~~~~~~~E~~~l~~l~H~ 418 (658)
+.+.||+|+||.||+|.+ .+|+. ||||.+....... .......+.+|+.++.++.|+
T Consensus 51 i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 130 (258)
T 1zth_A 51 MGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA 130 (258)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred hCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhC
Confidence 347899999999999998 67888 9999864321110 011224688999999999888
Q ss_pred Cc--cceeeEEecCCCCceEEEEEecCC-C----ChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhh-hcCCCCeeecc
Q 006178 419 NT--GKLLGYCRESSPFTRMLVFDYASN-G----TLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLH-TELGPPFTISE 490 (658)
Q Consensus 419 nI--v~l~~~~~~~~~~~~~lv~E~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH-~~~~~~ivHrD 490 (658)
++ ..++++ + ..++||||+.+ | +|.++... .++..+..++.|++.||.||| +. +|+|||
T Consensus 131 ~i~~p~~~~~----~--~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~---givHrD 196 (258)
T 1zth_A 131 GVSVPQPYTY----M--KNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEA---ELVHAD 196 (258)
T ss_dssp TCCCCCEEEE----E--TTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTS---CEECSS
T ss_pred CCCCCeEEEc----C--CCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHC---CEEeCC
Confidence 64 444432 2 34899999942 4 66665432 234567899999999999999 88 999999
Q ss_pred CCCcceeecCCCCceeccccchhhh
Q 006178 491 LNSSAVYLTEDFSPKLVDFDSWKTI 515 (658)
Q Consensus 491 lkp~NILl~~~~~~kl~DFGla~~~ 515 (658)
|||+|||+++ .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 8999999998653
No 268
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=5e-19 Score=171.69 Aligned_cols=112 Identities=18% Similarity=0.175 Sum_probs=60.7
Q ss_pred EEEEEecCCCCcccCCc-cccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 72 VLKINISGSSLKGFLAP-ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 72 v~~l~L~~n~l~g~~~~-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
++.|+|++|.+++..+. .|..+++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+|+
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 44555555555554332 34555555555555555555555455555555555555555554444445555555555555
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCCCcccCC
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p 183 (658)
+|++++..|..|.++++|++|+|++|++++..|
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 146 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAP 146 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCT
T ss_pred CCcCCeECHhHcCCCccCCEEECCCCcCCEECH
Confidence 555555555555555555555555555554333
No 269
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=9e-19 Score=169.87 Aligned_cols=147 Identities=19% Similarity=0.247 Sum_probs=126.7
Q ss_pred CCccceeecCC---------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCC
Q 006178 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN 128 (658)
Q Consensus 58 c~w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N 128 (658)
|.|..|.|... ...++.|+|++|.+++..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 67999999642 246899999999999887778999999999999999999988999999999999999999
Q ss_pred cCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccccc
Q 006178 129 QLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLC 208 (658)
Q Consensus 129 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~ 208 (658)
+|++..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|++++..+. .+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~---------------------~~~ 149 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKG---------------------TFS 149 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT---------------------TTT
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHH---------------------HHh
Confidence 99955555578999999999999999988889999999999999999999854432 245
Q ss_pred CCCCCcEEEccCCcCcc
Q 006178 209 HLSQLKVADFSYNFFVG 225 (658)
Q Consensus 209 ~l~~L~~l~ls~N~l~g 225 (658)
.+++|+.|++++|.+..
T Consensus 150 ~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 150 PLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp TCTTCCEEECCSSCEEC
T ss_pred CCCCCCEEEeCCCCcCC
Confidence 57889999999999864
No 270
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.78 E-value=1.4e-18 Score=175.81 Aligned_cols=178 Identities=19% Similarity=0.146 Sum_probs=151.5
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCc-ccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCccccee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNN-LIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKI 147 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 147 (658)
..+++.|+|++|.+++..|..|..+++|++|+|++|. +....|..|..+++|++|+|++|.+++..|..+.++++|++|
T Consensus 55 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 134 (285)
T 1ozn_A 55 CRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYL 134 (285)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEE
Confidence 3579999999999999889999999999999999997 777678899999999999999999998888899999999999
Q ss_pred ecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCc
Q 006178 148 NLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNF 222 (658)
Q Consensus 148 ~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~ 222 (658)
+|++|.+++..+..|.++++|++|+|++|++++..+... . ...++..+++++|.+++ +..+++|+.|++++|.
T Consensus 135 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 212 (285)
T 1ozn_A 135 YLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAF-R-GLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 212 (285)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTT-T-TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHh-c-CccccCEEECCCCcccccCHhHccCcccccEeeCCCCc
Confidence 999999997777779999999999999999995444322 1 13577888999998865 5578899999999999
Q ss_pred CcccCcccCC---CCCCCccCCCccCCCC
Q 006178 223 FVGSIPKCLE---YLPSTSFQGNCLQNKD 248 (658)
Q Consensus 223 l~g~ip~~l~---~l~~~~~~~n~~~~~~ 248 (658)
+++..|..+. +|..+++++|.+...+
T Consensus 213 l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 241 (285)
T 1ozn_A 213 LSALPTEALAPLRALQYLRLNDNPWVCDC 241 (285)
T ss_dssp CSCCCHHHHTTCTTCCEEECCSSCEECSG
T ss_pred CCcCCHHHcccCcccCEEeccCCCccCCC
Confidence 9986665555 4556788999776643
No 271
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.77 E-value=1.7e-18 Score=187.19 Aligned_cols=187 Identities=19% Similarity=0.175 Sum_probs=148.3
Q ss_pred ccceeecCC---------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcC
Q 006178 60 WTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130 (658)
Q Consensus 60 w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 130 (658)
|..|.|... ...++.|+|++|++++..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|++
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 567777631 24789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---c
Q 006178 131 TGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---L 207 (658)
Q Consensus 131 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~ 207 (658)
++..+..|..+++|++|+|++|.+++..+..|.++++|+.|+|++|+..+.+|...... ..++..++++.|.+++ +
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~-l~~L~~L~L~~n~l~~~~~~ 214 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEG-LFNLKYLNLGMCNIKDMPNL 214 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTT-CTTCCEEECTTSCCSSCCCC
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccC-CCCCCEEECCCCcccccccc
Confidence 97666779999999999999999997666788899999999999866555676543322 2466777777777665 3
Q ss_pred cCCCCCcEEEccCCcCcccCcccCCCC---CCCccCCCccCCC
Q 006178 208 CHLSQLKVADFSYNFFVGSIPKCLEYL---PSTSFQGNCLQNK 247 (658)
Q Consensus 208 ~~l~~L~~l~ls~N~l~g~ip~~l~~l---~~~~~~~n~~~~~ 247 (658)
..+++|+.|+|++|.+++..|..+..+ ..+.+++|.+...
T Consensus 215 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 257 (452)
T 3zyi_A 215 TPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLI 257 (452)
T ss_dssp TTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEE
T ss_pred cccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceE
Confidence 456677778888887777767665544 3455666655543
No 272
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.77 E-value=6e-19 Score=180.43 Aligned_cols=189 Identities=19% Similarity=0.193 Sum_probs=151.7
Q ss_pred CCCccceeecCC---------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccc--cCCcccCCCCCCCEEEc
Q 006178 57 PCHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIG--IIPKELGLLKRLKILDL 125 (658)
Q Consensus 57 ~c~w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~L 125 (658)
.|.|.++.|+.. ...++.|+|++|.++...+..|..+++|++|+|++|.++. ..|..+..+++|++|+|
T Consensus 6 ~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 6 SCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred eeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 378999999742 2478999999999997555568999999999999999984 34677778999999999
Q ss_pred cCCcCCCCCcccccCCcccceeecccccCCCCCh-hhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCc
Q 006178 126 GTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLP-AELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204 (658)
Q Consensus 126 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l 204 (658)
++|.++ .+|..+..+++|++|+|++|.+++..+ ..+.++++|++|++++|.+++..|..... ..++..+++++|.+
T Consensus 86 s~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~l~~n~l 162 (306)
T 2z66_A 86 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG--LSSLEVLKMAGNSF 162 (306)
T ss_dssp CSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTT--CTTCCEEECTTCEE
T ss_pred CCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhccc--CcCCCEEECCCCcc
Confidence 999998 678889999999999999999986554 57889999999999999998776653221 24677788888877
Q ss_pred cc------ccCCCCCcEEEccCCcCcccCcccCCC---CCCCccCCCccCCCC
Q 006178 205 TG------LCHLSQLKVADFSYNFFVGSIPKCLEY---LPSTSFQGNCLQNKD 248 (658)
Q Consensus 205 ~~------~~~l~~L~~l~ls~N~l~g~ip~~l~~---l~~~~~~~n~~~~~~ 248 (658)
++ +..+++|+.|++++|.+++..|..+.. |..+++++|.+....
T Consensus 163 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 215 (306)
T 2z66_A 163 QENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLD 215 (306)
T ss_dssp GGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCC
T ss_pred ccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccC
Confidence 54 556788999999999998877877654 445678888776643
No 273
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.77 E-value=1.1e-18 Score=175.19 Aligned_cols=173 Identities=25% Similarity=0.192 Sum_probs=142.0
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..+++.|+|++|.+++. +.++.+++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..++.+++|++|+
T Consensus 62 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp CTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 35789999999999883 5789999999999999999988888889999999999999999977777789999999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcC
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFF 223 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l 223 (658)
|++|++++..|..++++++|++|+|++|++++..|.... ...++..+++++|.+++ +..+++|+.|++++|.+
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 217 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFD--KLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPW 217 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT--TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhc--CCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCc
Confidence 999999987777789999999999999999965543211 23577888999998875 45688999999999999
Q ss_pred cccCcccCCCCCCCccCCCccCCCCc
Q 006178 224 VGSIPKCLEYLPSTSFQGNCLQNKDP 249 (658)
Q Consensus 224 ~g~ip~~l~~l~~~~~~~n~~~~~~~ 249 (658)
+|..| ++..+....|.+.+..|
T Consensus 218 ~~~~~----~l~~l~~~~n~~~g~ip 239 (272)
T 3rfs_A 218 DCTCP----GIRYLSEWINKHSGVVR 239 (272)
T ss_dssp CCCTT----TTHHHHHHHHHTGGGBB
T ss_pred cccCc----HHHHHHHHHHhCCCccc
Confidence 87766 34445556666655433
No 274
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.76 E-value=3.8e-18 Score=172.79 Aligned_cols=172 Identities=28% Similarity=0.284 Sum_probs=145.0
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
..++.|+|++|.+++..+..|..+++|++|+|++|.+++..+. ..+++|++|+|++|+++ .+|..+..+++|+.|+|
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 4789999999999998889999999999999999999975443 78999999999999998 78999999999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccc-----cCCCCCcEEEccCCcCc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYNFFV 224 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~-----~~l~~L~~l~ls~N~l~ 224 (658)
++|++++..|..|.++++|++|+|++|++++. |..... ...++..+++++|+++.+ ..+++|+.|++++|+++
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~-~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTL-PPGLLT-PTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCC-CTTTTT-TCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCcc-Chhhcc-cccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC
Confidence 99999987778899999999999999999954 443222 235778889999988753 45889999999999998
Q ss_pred ccCcccCCC---CCCCccCCCccCCC
Q 006178 225 GSIPKCLEY---LPSTSFQGNCLQNK 247 (658)
Q Consensus 225 g~ip~~l~~---l~~~~~~~n~~~~~ 247 (658)
.+|..+.. +..+.+.+|.+...
T Consensus 186 -~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 186 -TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp -CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred -ccChhhcccccCCeEEeCCCCccCc
Confidence 77876654 45567788876653
No 275
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.76 E-value=8.1e-19 Score=189.97 Aligned_cols=150 Identities=22% Similarity=0.219 Sum_probs=118.5
Q ss_pred CCCCccc--eeecCC--------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccC-CcccCCCCCCCEEE
Q 006178 56 DPCHWTG--IACSDA--------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGII-PKELGLLKRLKILD 124 (658)
Q Consensus 56 ~~c~w~g--v~C~~~--------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~-p~~~~~l~~L~~L~ 124 (658)
..|.|.+ |.|+.. ..+++.|+|++|.+++..|..|+.+++|++|+|++|.+.+.+ |..|.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 3465555 777642 256899999999999988899999999999999999987665 56789999999999
Q ss_pred ccCCcCCCCCcccccCCcccceeecccccCCCCChhh--hcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCC
Q 006178 125 LGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAE--LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSA 202 (658)
Q Consensus 125 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~--~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n 202 (658)
|++|++++..|..|+++++|++|+|++|.+++.+|.. |.++++|++|+|++|++++..|..... ...++..+++++|
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-~l~~L~~L~L~~n 164 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFL-NMRRFHVLDLTFN 164 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGG-GCTTCCEEECTTC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccC-CCCcccEEeCCCC
Confidence 9999999888889999999999999999998866666 888999999999999998776653211 1245566666666
Q ss_pred Cccc
Q 006178 203 NLTG 206 (658)
Q Consensus 203 ~l~~ 206 (658)
.+.+
T Consensus 165 ~l~~ 168 (455)
T 3v47_A 165 KVKS 168 (455)
T ss_dssp CBSC
T ss_pred cccc
Confidence 6543
No 276
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.76 E-value=8.2e-18 Score=168.87 Aligned_cols=174 Identities=24% Similarity=0.215 Sum_probs=146.3
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|++++|.++.. +.+..+++|++|+|++|.+++ + ..+..+++|++|+|++|.+++..|..++.+++|++|+|
T Consensus 41 ~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 116 (272)
T 3rfs_A 41 NSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116 (272)
T ss_dssp TTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEEC
Confidence 4688999999998753 468999999999999999987 3 47899999999999999999877777899999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcCc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFV 224 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l~ 224 (658)
++|++++..|..|+++++|++|+|++|++++..|.... ...++..+++++|.+++ +..+++|+.|++++|.++
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (272)
T 3rfs_A 117 VENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFD--KLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK 194 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT--TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhc--cCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCC
Confidence 99999988788899999999999999999965543221 23578888999998875 456889999999999999
Q ss_pred ccCcccCCC---CCCCccCCCccCCCCc
Q 006178 225 GSIPKCLEY---LPSTSFQGNCLQNKDP 249 (658)
Q Consensus 225 g~ip~~l~~---l~~~~~~~n~~~~~~~ 249 (658)
+..|..+.. |..+++.+|.+.+.+|
T Consensus 195 ~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 195 SVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 887766554 5557889998776554
No 277
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.76 E-value=2e-18 Score=173.84 Aligned_cols=110 Identities=21% Similarity=0.181 Sum_probs=70.7
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
.++.|+|++|.+++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..+.++++|+.|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 46666666666666555566666666666666666666555566666666666666666665555566666666666666
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCCCcc
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNRLQG 180 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g 180 (658)
+|.+++..+..++++++|++|+|++|++++
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 138 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQS 138 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccce
Confidence 666665444456666666666666666654
No 278
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.76 E-value=5.5e-19 Score=199.13 Aligned_cols=176 Identities=18% Similarity=0.301 Sum_probs=155.4
Q ss_pred CCCEEEEEecCCCCccc-----------------CCcccc--CCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCc
Q 006178 69 RDRVLKINISGSSLKGF-----------------LAPELG--LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ 129 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~-----------------~~~~~~--~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 129 (658)
..+++.|+|++|.++|. +|+.++ ++++|++|+|++|++.|.+|..|+++++|++|+|++|+
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 35789999999999996 999999 99999999999999999999999999999999999998
Q ss_pred -CCC-CCcccccCC------cccceeecccccCCCCChh--hhcCCCCCCEEeCCCCCCcccCCCCCCCCcccccccccc
Q 006178 130 -LTG-PIPPEIGNL------TGLVKINLQSNGLTGRLPA--ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYA 199 (658)
Q Consensus 130 -l~g-~~p~~~~~l------~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l 199 (658)
++| .+|..++.+ ++|+.|+|++|+++ .+|. .++++++|++|+|++|+++|.+| .. ....++..+++
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~--~~l~~L~~L~L 360 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AF--GSEIKLASLNL 360 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CC--EEEEEESEEEC
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hh--CCCCCCCEEEC
Confidence 998 899999887 99999999999999 8998 99999999999999999999999 22 23457888899
Q ss_pred CCCCccc----ccCCCC-CcEEEccCCcCcccCcccCCC-----CCCCccCCCccCCCCc
Q 006178 200 SSANLTG----LCHLSQ-LKVADFSYNFFVGSIPKCLEY-----LPSTSFQGNCLQNKDP 249 (658)
Q Consensus 200 ~~n~l~~----~~~l~~-L~~l~ls~N~l~g~ip~~l~~-----l~~~~~~~n~~~~~~~ 249 (658)
+.|.++. +..+++ |+.|++++|.++ .+|..+.. |..+++++|.+.+..|
T Consensus 361 ~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p 419 (636)
T 4eco_A 361 AYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDG 419 (636)
T ss_dssp CSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTT
T ss_pred CCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcch
Confidence 9998764 456778 999999999999 88987653 5567888998877544
No 279
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.75 E-value=6.3e-18 Score=182.09 Aligned_cols=187 Identities=20% Similarity=0.195 Sum_probs=150.2
Q ss_pred ccceeecCC---------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcC
Q 006178 60 WTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQL 130 (658)
Q Consensus 60 w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 130 (658)
|..|.|... ...++.|+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|++
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 567888631 24678999999999999889999999999999999999988889999999999999999999
Q ss_pred CCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---c
Q 006178 131 TGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---L 207 (658)
Q Consensus 131 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~ 207 (658)
++..+..|..+++|+.|+|++|.+++..+..|.++++|++|+|++|+..+.+|...... ..++..+++++|.++. +
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~-l~~L~~L~L~~n~l~~~~~~ 203 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEG-LSNLRYLNLAMCNLREIPNL 203 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTT-CSSCCEEECTTSCCSSCCCC
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhc-ccccCeecCCCCcCcccccc
Confidence 96666689999999999999999997777789999999999999966656777643332 2467777888887765 4
Q ss_pred cCCCCCcEEEccCCcCcccCcccCCCC---CCCccCCCccCCC
Q 006178 208 CHLSQLKVADFSYNFFVGSIPKCLEYL---PSTSFQGNCLQNK 247 (658)
Q Consensus 208 ~~l~~L~~l~ls~N~l~g~ip~~l~~l---~~~~~~~n~~~~~ 247 (658)
..+++|+.|+|++|.+++..|..+..+ ..+.+++|.+...
T Consensus 204 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 246 (440)
T 3zyj_A 204 TPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVI 246 (440)
T ss_dssp TTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEE
T ss_pred CCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEE
Confidence 456778888888888887777666544 4456677766544
No 280
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.75 E-value=4.8e-18 Score=170.95 Aligned_cols=179 Identities=20% Similarity=0.193 Sum_probs=148.5
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..+++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..|.++++|++|++++|++++..+..++.+++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred ccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEE
Confidence 35789999999999998888999999999999999999998889999999999999999999977777899999999999
Q ss_pred cccccCCC-CChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCcccccc----ccccCCCCccccc----CCCCCcEEEcc
Q 006178 149 LQSNGLTG-RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIH----GMYASSANLTGLC----HLSQLKVADFS 219 (658)
Q Consensus 149 Ls~N~l~g-~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~----~~~l~~n~l~~~~----~l~~L~~l~ls 219 (658)
|++|.+++ .+|..+.++++|++|+|++|++++..+..... ...+. .++++.|.++++. ...+|+.|+++
T Consensus 131 l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~--l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~ 208 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRV--LHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALD 208 (276)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHH--HHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECC
T ss_pred CcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhh--hhhccccceeeecCCCcccccCccccCCCcccEEECC
Confidence 99999987 47999999999999999999999654432111 11222 5788888887542 34589999999
Q ss_pred CCcCcccCcccCC---CCCCCccCCCccCCCCc
Q 006178 220 YNFFVGSIPKCLE---YLPSTSFQGNCLQNKDP 249 (658)
Q Consensus 220 ~N~l~g~ip~~l~---~l~~~~~~~n~~~~~~~ 249 (658)
+|.+++..+..+. ++..+++++|.+.+.++
T Consensus 209 ~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 209 TNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp SSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred CCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 9999976665555 45567899998887654
No 281
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.75 E-value=2.4e-18 Score=175.91 Aligned_cols=173 Identities=19% Similarity=0.212 Sum_probs=94.2
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCC-cccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP-KELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
+++.|+|++|.+++ +|..+..+++|++|+|++|++++..+ ..+..+++|++|+|++|.+++..|..+..+++|+.|+|
T Consensus 79 ~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 157 (306)
T 2z66_A 79 SLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 157 (306)
T ss_dssp CCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEEC
T ss_pred ccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEEC
Confidence 44555555555543 44445556666666666666554433 34555666666666666665555555556666666666
Q ss_pred ccccCCC-CChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcC
Q 006178 150 QSNGLTG-RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFF 223 (658)
Q Consensus 150 s~N~l~g-~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l 223 (658)
++|.+++ .+|..+..+++|++|+|++|++++..|.... ...++..+++++|.+++ +..+++|+.|++++|.+
T Consensus 158 ~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 235 (306)
T 2z66_A 158 AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN--SLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 235 (306)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTT--TCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCC
T ss_pred CCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhc--CCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCC
Confidence 6666654 3555556666666666666666544443221 12345555566665543 23455666666666666
Q ss_pred cccCcccCCCC----CCCccCCCccCC
Q 006178 224 VGSIPKCLEYL----PSTSFQGNCLQN 246 (658)
Q Consensus 224 ~g~ip~~l~~l----~~~~~~~n~~~~ 246 (658)
++..|..+..+ ..+++++|.+.+
T Consensus 236 ~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 236 MTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred cccCHHHHHhhhccCCEEEccCCCeec
Confidence 66655554433 234555655544
No 282
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.75 E-value=4.7e-18 Score=190.29 Aligned_cols=112 Identities=18% Similarity=0.165 Sum_probs=63.8
Q ss_pred EEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeeccc
Q 006178 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (658)
Q Consensus 72 v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (658)
++.|++++|.++...+..+..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++
T Consensus 53 l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 132 (597)
T 3oja_B 53 QKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLER 132 (597)
T ss_dssp CSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred ceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeC
Confidence 44555666555554444455566666666666666655555566666666666666666655555555666666666666
Q ss_pred ccCCCCChhhhcCCCCCCEEeCCCCCCcccCC
Q 006178 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (658)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p 183 (658)
|.+++..+..|+++++|++|+|++|.+++..|
T Consensus 133 n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~ 164 (597)
T 3oja_B 133 NDLSSLPRGIFHNTPKLTTLSMSNNNLERIED 164 (597)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCBCCT
T ss_pred CCCCCCCHHHhccCCCCCEEEeeCCcCCCCCh
Confidence 66654333334556666666666666654444
No 283
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.75 E-value=1.5e-18 Score=181.87 Aligned_cols=173 Identities=22% Similarity=0.203 Sum_probs=127.1
Q ss_pred CCccceeecCC---------CCCEEEEEecCCCCcccCCcccc-CCCCCcEEeccCCcccccCCcccCCCCCCCEEEccC
Q 006178 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELG-LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (658)
Q Consensus 58 c~w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~~~~-~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~ 127 (658)
|.+..+.|... ...++.|+|++|.+++..+..+. .+++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 56777777531 23467788888888887776676 788888888888888877777788888888888888
Q ss_pred CcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccc
Q 006178 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL 207 (658)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~ 207 (658)
|+|++..+..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|+|++ +|.... .++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~~~~-----------------~~~ 159 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPVELI-----------------KDG 159 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-CCGGGT-----------------C--
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-eCHHHh-----------------cCc
Confidence 88886666677888888888888888887777788888888888888888873 443111 122
Q ss_pred cCCCCCcEEEccCCcCcccCcccCCCC-----CCCccCCCccCCCC
Q 006178 208 CHLSQLKVADFSYNFFVGSIPKCLEYL-----PSTSFQGNCLQNKD 248 (658)
Q Consensus 208 ~~l~~L~~l~ls~N~l~g~ip~~l~~l-----~~~~~~~n~~~~~~ 248 (658)
..+++|+.|||++|+|++..+..+..+ ..+.+.+|.+...|
T Consensus 160 ~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 160 NKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp --CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred ccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCc
Confidence 567889999999999996544555554 45788899777654
No 284
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.75 E-value=2e-17 Score=171.27 Aligned_cols=185 Identities=21% Similarity=0.304 Sum_probs=149.6
Q ss_pred CCccceeecCC---------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCC
Q 006178 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN 128 (658)
Q Consensus 58 c~w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N 128 (658)
|.|..+.|... ...++.|+|++|.+++..|..|..+++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 78999999642 246899999999999988889999999999999999999988999999999999999999
Q ss_pred cCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcc--cCCCCCCCCccccccccccCCCCccc
Q 006178 129 QLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG--AVPAGSNSGYTANIHGMYASSANLTG 206 (658)
Q Consensus 129 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~~~~~~l~~~~l~~n~l~~ 206 (658)
+++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|++++|.++. ..|... ... .+..++++.|.+++
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-~~l--~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAF-DGL--KLNYLRISEAKLTG 186 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSS-CSC--CCSCCBCCSSBCSS
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccc-cCC--ccCEEECcCCCCCc
Confidence 998 7887776 899999999999997767779999999999999999963 344322 222 66777888887766
Q ss_pred ccC--CCCCcEEEccCCcCcccCcccCC---CCCCCccCCCccCCCC
Q 006178 207 LCH--LSQLKVADFSYNFFVGSIPKCLE---YLPSTSFQGNCLQNKD 248 (658)
Q Consensus 207 ~~~--l~~L~~l~ls~N~l~g~ip~~l~---~l~~~~~~~n~~~~~~ 248 (658)
+.. .++|+.|++++|.+++..|..+. +|..+++++|.+....
T Consensus 187 l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 233 (332)
T 2ft3_A 187 IPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIE 233 (332)
T ss_dssp CCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCC
T ss_pred cCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCC
Confidence 432 25788888888888877666554 3455677777766643
No 285
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.74 E-value=5e-19 Score=181.52 Aligned_cols=173 Identities=17% Similarity=0.126 Sum_probs=85.0
Q ss_pred EEEEEecCCCC-cccCCcccc-------CCCCCcEEeccCCcccccCCccc--CCCCCCCEEEccCCcCCCCCcccccCC
Q 006178 72 VLKINISGSSL-KGFLAPELG-------LLTYLQELILHGNNLIGIIPKEL--GLLKRLKILDLGTNQLTGPIPPEIGNL 141 (658)
Q Consensus 72 v~~l~L~~n~l-~g~~~~~~~-------~l~~L~~L~L~~N~l~g~~p~~~--~~l~~L~~L~Ls~N~l~g~~p~~~~~l 141 (658)
++.|+|++|.+ .+.+|..+. .+++|++|+|++|++++.+|..+ ..+++|++|+|++|++++. |..++.+
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l 143 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAEL 143 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHH
Confidence 44455555555 334444443 45555555555555555555544 5555555555555555544 5444444
Q ss_pred -----cccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccC--CCCCCCCccccccccccCCCCcccc-------
Q 006178 142 -----TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAV--PAGSNSGYTANIHGMYASSANLTGL------- 207 (658)
Q Consensus 142 -----~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~--p~~~~~~~~~~l~~~~l~~n~l~~~------- 207 (658)
++|++|+|++|++++..|..|+++++|++|+|++|++.|.+ |.........++..+++++|.++++
T Consensus 144 ~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 223 (312)
T 1wwl_A 144 QQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSAL 223 (312)
T ss_dssp HTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHH
T ss_pred HHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHH
Confidence 55555555555555544455555555555555555554431 1111111123444555555555421
Q ss_pred -cCCCCCcEEEccCCcCcccCcc-c---CCCCCCCccCCCccC
Q 006178 208 -CHLSQLKVADFSYNFFVGSIPK-C---LEYLPSTSFQGNCLQ 245 (658)
Q Consensus 208 -~~l~~L~~l~ls~N~l~g~ip~-~---l~~l~~~~~~~n~~~ 245 (658)
..+++|+.|++++|.+++.+|. . +.+|..+++++|.+.
T Consensus 224 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 266 (312)
T 1wwl_A 224 AAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK 266 (312)
T ss_dssp HHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS
T ss_pred HhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC
Confidence 1345555555555555554431 1 233444455555444
No 286
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.74 E-value=1.6e-17 Score=161.08 Aligned_cols=151 Identities=20% Similarity=0.248 Sum_probs=126.4
Q ss_pred EEEecCCCCcccCCccccCCCCCcEEeccCCcccccCC-cccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccc
Q 006178 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP-KELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (658)
Q Consensus 74 ~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 152 (658)
.+++++|.++. +|..+. ..++.|+|++|++++..| ..|..+++|++|+|++|++++..|..|.++++|+.|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 57778888876 676554 457899999999998765 45899999999999999999877779999999999999999
Q ss_pred cCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCcccCC
Q 006178 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLE 232 (658)
Q Consensus 153 ~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip~~l~ 232 (658)
++++..|..|.++++|++|+|++|++++..|. .+..+++|+.|+|++|++++..|..+.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~---------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~ 150 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGND---------------------SFIGLSSVRLLSLYDNQITTVAPGAFD 150 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTT---------------------SSTTCTTCSEEECTTSCCCCBCTTTTT
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHh---------------------HcCCCccCCEEECCCCcCCEECHHHhc
Confidence 99988888899999999999999999976664 245677889999999999888787766
Q ss_pred CC---CCCccCCCccCCCC
Q 006178 233 YL---PSTSFQGNCLQNKD 248 (658)
Q Consensus 233 ~l---~~~~~~~n~~~~~~ 248 (658)
.+ ..+++++|.+.+.+
T Consensus 151 ~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 151 TLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp TCTTCCEEECCSCCEECSG
T ss_pred CCCCCCEEEecCcCCcCCC
Confidence 54 44677888776644
No 287
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.74 E-value=3.5e-18 Score=189.66 Aligned_cols=188 Identities=18% Similarity=0.212 Sum_probs=152.3
Q ss_pred CCCccceeecCC-----------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEc
Q 006178 57 PCHWTGIACSDA-----------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDL 125 (658)
Q Consensus 57 ~c~w~gv~C~~~-----------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~L 125 (658)
.|.|.|+ |+.. ..+++.|+|++|.+++..|..|..+++|++|+|++|++++..|..|.++++|++|||
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 5889887 8631 247899999999999988899999999999999999999988899999999999999
Q ss_pred cCCcCCCCCcccccCCcccceeecccccCCC-CChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCc
Q 006178 126 GTNQLTGPIPPEIGNLTGLVKINLQSNGLTG-RLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204 (658)
Q Consensus 126 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l 204 (658)
++|++++..|..|+++++|++|+|++|.+++ .+|..++++++|++|++++|++.+.+|...... ..++..++++.|.+
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~-l~~L~~L~L~~n~l 160 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAG-LTSLNELEIKALSL 160 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTT-CCEEEEEEEEETTC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhc-ccccCeeeccCCcc
Confidence 9999998777779999999999999999986 467889999999999999999767777533222 34667777777776
Q ss_pred cc-----ccCCCCCcEEEccCCcCcccCccc----CCCCCCCccCCCccCCC
Q 006178 205 TG-----LCHLSQLKVADFSYNFFVGSIPKC----LEYLPSTSFQGNCLQNK 247 (658)
Q Consensus 205 ~~-----~~~l~~L~~l~ls~N~l~g~ip~~----l~~l~~~~~~~n~~~~~ 247 (658)
++ +..+++|+.|+++.|.+. .+|.. +.++..+++++|.+.+.
T Consensus 161 ~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~ 211 (549)
T 2z81_A 161 RNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARF 211 (549)
T ss_dssp CEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTC
T ss_pred cccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccc
Confidence 54 556778888888888765 34432 45666777888876653
No 288
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.74 E-value=3.2e-18 Score=178.82 Aligned_cols=188 Identities=17% Similarity=0.216 Sum_probs=148.1
Q ss_pred CCCCCccceeecCC-----------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEE
Q 006178 55 ADPCHWTGIACSDA-----------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKIL 123 (658)
Q Consensus 55 ~~~c~w~gv~C~~~-----------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L 123 (658)
..+|.|.|+ |+.. ..+++.|+|++|.+++..+..+..+++|++|+|++|++++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 457889887 6521 2478999999999998777789999999999999999999888899999999999
Q ss_pred EccCCcCCCCCcccccCCcccceeecccccCCCCChh--hhcCCCCCCEEeCCCCC-CcccCCCCCCCCccccccccccC
Q 006178 124 DLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPA--ELGNLISLEELHLDRNR-LQGAVPAGSNSGYTANIHGMYAS 200 (658)
Q Consensus 124 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~L~~N~-l~g~~p~~~~~~~~~~l~~~~l~ 200 (658)
+|++|++++..+..++++++|++|+|++|++++ +|. .+.++++|++|++++|+ ++ .++..... ...++..++++
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~-~~~~~~~~-~l~~L~~L~l~ 182 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFT-KIQRKDFA-GLTFLEELEID 182 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCC-EECTTTTT-TCCEEEEEEEE
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEEECCCCcccc-ccCHHHcc-CCCCCCEEECC
Confidence 999999996544558999999999999999994 555 78999999999999995 55 44432222 13467777888
Q ss_pred CCCccc-----ccCCCCCcEEEccCCcCcccCccc----CCCCCCCccCCCccCCC
Q 006178 201 SANLTG-----LCHLSQLKVADFSYNFFVGSIPKC----LEYLPSTSFQGNCLQNK 247 (658)
Q Consensus 201 ~n~l~~-----~~~l~~L~~l~ls~N~l~g~ip~~----l~~l~~~~~~~n~~~~~ 247 (658)
+|.+++ +..+++|+.|++++|.++ .+|.. +.++..+++++|.+...
T Consensus 183 ~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~ 237 (353)
T 2z80_A 183 ASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTF 237 (353)
T ss_dssp ETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTC
T ss_pred CCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCccccc
Confidence 887654 556788899999999885 44542 45667778888877664
No 289
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.74 E-value=2.3e-17 Score=170.53 Aligned_cols=185 Identities=19% Similarity=0.242 Sum_probs=133.8
Q ss_pred CCCccceeecCC---------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccC
Q 006178 57 PCHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (658)
Q Consensus 57 ~c~w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~ 127 (658)
.|.|+.+.|.+. ...++.|+|++|.+++..+..|+.+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 368999999641 24688999999999998888999999999999999999998899999999999999999
Q ss_pred CcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcc--cCCCCCCCCccccccccccCCCCcc
Q 006178 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG--AVPAGSNSGYTANIHGMYASSANLT 205 (658)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~~~~~~l~~~~l~~n~l~ 205 (658)
|+++ .+|..+. ++|+.|++++|.+++..+..|.++++|++|++++|.++. ..+... ....++..++++.|.++
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAF--QGMKKLSYIRIADTNIT 184 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGG--GGCTTCCEEECCSSCCC
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhc--cCCCCcCEEECCCCccc
Confidence 9998 6777665 788888888888887777778888888888888888853 333211 11234455555555554
Q ss_pred cccC--CCCCcEEEccCCcCcccCcccCCC---CCCCccCCCccCC
Q 006178 206 GLCH--LSQLKVADFSYNFFVGSIPKCLEY---LPSTSFQGNCLQN 246 (658)
Q Consensus 206 ~~~~--l~~L~~l~ls~N~l~g~ip~~l~~---l~~~~~~~n~~~~ 246 (658)
.+.. .++|+.|++++|.+++..|..+.. |..+++++|.+..
T Consensus 185 ~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 230 (330)
T 1xku_A 185 TIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 230 (330)
T ss_dssp SCCSSCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCE
T ss_pred cCCccccccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCce
Confidence 4321 245666666666665555544433 3334455554443
No 290
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.73 E-value=9.2e-18 Score=165.07 Aligned_cols=175 Identities=12% Similarity=0.121 Sum_probs=142.1
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCc-ccccCCcccCCCCCCCEEEccC-CcCCCCCcccccCCccccee
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNN-LIGIIPKELGLLKRLKILDLGT-NQLTGPIPPEIGNLTGLVKI 147 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L 147 (658)
..++.|+|++|.+++..+..|..+++|++|+|++|+ +++..+..|.++++|++|+|++ |++++..|..|.++++|+.|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 478999999999999877789999999999999997 8877777899999999999998 99997666789999999999
Q ss_pred ecccccCCCCChhhhcCCCCCC---EEeCCCC-CCcccCCCCCCCCcccccc-ccccCCCCccccc----CCCCCcEEEc
Q 006178 148 NLQSNGLTGRLPAELGNLISLE---ELHLDRN-RLQGAVPAGSNSGYTANIH-GMYASSANLTGLC----HLSQLKVADF 218 (658)
Q Consensus 148 ~Ls~N~l~g~~p~~~~~l~~L~---~L~L~~N-~l~g~~p~~~~~~~~~~l~-~~~l~~n~l~~~~----~l~~L~~l~l 218 (658)
+|++|.+++ +|. +..+++|+ +|++++| ++++ +|..... ...++. .+++++|.++.+. ..++|+.|++
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~-i~~~~~~-~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L 186 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTS-IPVNAFQ-GLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYL 186 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCE-ECTTTTT-TTBSSEEEEECCSCCCCEECTTTTTTCEEEEEEC
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhh-cCccccc-chhcceeEEEcCCCCCcccCHhhcCCCCCCEEEc
Confidence 999999996 776 88899998 9999999 8885 4443222 134677 8888888886532 2368999999
Q ss_pred cCCc-CcccCcccCC----CCCCCccCCCccCCCC
Q 006178 219 SYNF-FVGSIPKCLE----YLPSTSFQGNCLQNKD 248 (658)
Q Consensus 219 s~N~-l~g~ip~~l~----~l~~~~~~~n~~~~~~ 248 (658)
++|. +++..+..+. ++..+++++|.+....
T Consensus 187 ~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~ 221 (239)
T 2xwt_C 187 NKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALP 221 (239)
T ss_dssp TTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCC
T ss_pred CCCCCcccCCHHHhhccccCCcEEECCCCccccCC
Confidence 9995 8855555554 4556788888877643
No 291
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.73 E-value=2.5e-17 Score=159.59 Aligned_cols=150 Identities=21% Similarity=0.252 Sum_probs=129.0
Q ss_pred EEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeeccccc
Q 006178 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNG 153 (658)
Q Consensus 74 ~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 153 (658)
.+++++++++. +|..+. ++|+.|+|++|++++..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 58999999986 566554 789999999999998888899999999999999999998889999999999999999999
Q ss_pred CCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCcccCCC
Q 006178 154 LTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEY 233 (658)
Q Consensus 154 l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip~~l~~ 233 (658)
|++..+..|.++++|++|+|++|++++..|. .+..+++|+.|+|++|.+++..+..+..
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~---------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 150 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVD---------------------AFQDLHNLNLLSLYDNKLQTIAKGTFSP 150 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTT---------------------TTTTCTTCCEEECCSSCCSCCCTTTTTT
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHH---------------------HcCCCCCCCEEECCCCcCCEECHHHHhC
Confidence 9966556689999999999999999966553 3556889999999999999877766655
Q ss_pred C---CCCccCCCccCCC
Q 006178 234 L---PSTSFQGNCLQNK 247 (658)
Q Consensus 234 l---~~~~~~~n~~~~~ 247 (658)
+ ..+++++|.+...
T Consensus 151 l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 151 LRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CTTCCEEECCSSCEECS
T ss_pred CCCCCEEEeCCCCcCCC
Confidence 4 5577889977654
No 292
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.73 E-value=4.9e-18 Score=174.01 Aligned_cols=174 Identities=17% Similarity=0.167 Sum_probs=104.7
Q ss_pred CEEEEEecCCCCcccCCccc--cCCCCCcEEeccCCcccccCC----cccCCCCCCCEEEccCCcCCCCCcccccCCccc
Q 006178 71 RVLKINISGSSLKGFLAPEL--GLLTYLQELILHGNNLIGIIP----KELGLLKRLKILDLGTNQLTGPIPPEIGNLTGL 144 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~--~~l~~L~~L~L~~N~l~g~~p----~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 144 (658)
+++.|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..+++|++|+|++|++++..|..++.+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 47777777777777777776 777777777777777776544 234456777777777777776666677777777
Q ss_pred ceeecccccCCCC--Chh--hhcCCCCCCEEeCCCCCCcccCCCCC--CCCccccccccccCCCCcccc-----cCC---
Q 006178 145 VKINLQSNGLTGR--LPA--ELGNLISLEELHLDRNRLQGAVPAGS--NSGYTANIHGMYASSANLTGL-----CHL--- 210 (658)
Q Consensus 145 ~~L~Ls~N~l~g~--~p~--~~~~l~~L~~L~L~~N~l~g~~p~~~--~~~~~~~l~~~~l~~n~l~~~-----~~l--- 210 (658)
++|+|++|++.+. ++. .++.+++|++|+|++|+++. +|... .......+..+++++|.+++. ..+
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 7777777776542 221 22456666666666666652 11100 000113455566666665543 222
Q ss_pred CCCcEEEccCCcCcccCcccC-CCCCCCccCCCccCC
Q 006178 211 SQLKVADFSYNFFVGSIPKCL-EYLPSTSFQGNCLQN 246 (658)
Q Consensus 211 ~~L~~l~ls~N~l~g~ip~~l-~~l~~~~~~~n~~~~ 246 (658)
++|++|++++|+++ .+|..+ .+|..+++++|.+.+
T Consensus 251 ~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l~~ 286 (310)
T 4glp_A 251 SALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRLNR 286 (310)
T ss_dssp TTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCCCS
T ss_pred CcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcCCC
Confidence 46666666666666 455443 355566666666554
No 293
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=3.2e-18 Score=196.84 Aligned_cols=173 Identities=19% Similarity=0.280 Sum_probs=151.6
Q ss_pred CCCEEEEEecCCCCcc-----------------cCCcccc--CCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCc
Q 006178 69 RDRVLKINISGSSLKG-----------------FLAPELG--LLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ 129 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g-----------------~~~~~~~--~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 129 (658)
..+++.|+|++|.|+| .+|+.++ ++++|++|+|++|++.|.+|..|++|++|++|+|++|+
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 3578999999999999 4999988 99999999999999999999999999999999999998
Q ss_pred -CCC-CCcccccCCc-------ccceeecccccCCCCChh--hhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccc
Q 006178 130 -LTG-PIPPEIGNLT-------GLVKINLQSNGLTGRLPA--ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMY 198 (658)
Q Consensus 130 -l~g-~~p~~~~~l~-------~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~ 198 (658)
++| .+|..++.++ +|+.|+|++|+++ .+|. .|+++++|+.|+|++|+++ .+|. .....++..++
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~---~~~L~~L~~L~ 601 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEA---FGTNVKLTDLK 601 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCC---CCTTSEESEEE
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchh---hcCCCcceEEE
Confidence 998 8998887776 9999999999999 8998 9999999999999999999 8882 22346788889
Q ss_pred cCCCCccc----ccCCCC-CcEEEccCCcCcccCcccCCC-----CCCCccCCCccCCC
Q 006178 199 ASSANLTG----LCHLSQ-LKVADFSYNFFVGSIPKCLEY-----LPSTSFQGNCLQNK 247 (658)
Q Consensus 199 l~~n~l~~----~~~l~~-L~~l~ls~N~l~g~ip~~l~~-----l~~~~~~~n~~~~~ 247 (658)
++.|.++. +.++++ |+.|++++|.++ .+|..+.. |..+++++|.+.+.
T Consensus 602 Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ 659 (876)
T 4ecn_A 602 LDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSE 659 (876)
T ss_dssp CCSSCCSCCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTT
T ss_pred CcCCccccchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCc
Confidence 99998864 456777 999999999999 88987655 45578888877664
No 294
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.73 E-value=2.1e-17 Score=179.96 Aligned_cols=183 Identities=19% Similarity=0.172 Sum_probs=152.8
Q ss_pred CccceeecC---------CCCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCc
Q 006178 59 HWTGIACSD---------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ 129 (658)
Q Consensus 59 ~w~gv~C~~---------~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 129 (658)
.|..|.|.. ....++.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 366778863 13468899999999999889999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---
Q 006178 130 LTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG--- 206 (658)
Q Consensus 130 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~--- 206 (658)
+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|.... ...++..++++.|.+++
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~ 169 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFS--GLNSLEQLTLEKCNLTSIPT 169 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSST--TCTTCCEEEEESCCCSSCCH
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhcc--CCCCCCEEECCCCcCcccCh
Confidence 9965556789999999999999999998899999999999999999999976664332 23567788888888765
Q ss_pred --ccCCCCCcEEEccCCcCcccCcccCCCC---CCCccCCCc
Q 006178 207 --LCHLSQLKVADFSYNFFVGSIPKCLEYL---PSTSFQGNC 243 (658)
Q Consensus 207 --~~~l~~L~~l~ls~N~l~g~ip~~l~~l---~~~~~~~n~ 243 (658)
+.++++|+.|++++|.+++..+..+..+ ..+++++|.
T Consensus 170 ~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~ 211 (477)
T 2id5_A 170 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWP 211 (477)
T ss_dssp HHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCT
T ss_pred hHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCc
Confidence 4578899999999999987777666554 445566653
No 295
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.73 E-value=7.8e-18 Score=189.16 Aligned_cols=174 Identities=21% Similarity=0.169 Sum_probs=137.1
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..+++.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 31 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 31 PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 35789999999999998888999999999999999999998899999999999999999999988899999999999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcc-cCCCCCCCCccccccccccCCCCccccc-----CCCC----CcEEEc
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQG-AVPAGSNSGYTANIHGMYASSANLTGLC-----HLSQ----LKVADF 218 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g-~~p~~~~~~~~~~l~~~~l~~n~l~~~~-----~l~~----L~~l~l 218 (658)
|++|.+++..|..++++++|++|+|++|++++ .+|.... ...++..+++++|.++++. .+.+ +..|++
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~--~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l 188 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFS--NLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDM 188 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGG--TCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEEC
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHh--hcCCCCEEEccCCcceecChhhhhhhhccccccceeec
Confidence 99999998777889999999999999999986 5665321 1245566666666665422 1222 346777
Q ss_pred cCCcCcccCcccCC--CCCCCccCCCcc
Q 006178 219 SYNFFVGSIPKCLE--YLPSTSFQGNCL 244 (658)
Q Consensus 219 s~N~l~g~ip~~l~--~l~~~~~~~n~~ 244 (658)
++|.+++..+..+. ++..+++++|.+
T Consensus 189 ~~n~l~~~~~~~~~~~~L~~L~L~~n~~ 216 (606)
T 3vq2_A 189 SLNPIDFIQDQAFQGIKLHELTLRGNFN 216 (606)
T ss_dssp TTCCCCEECTTTTTTCEEEEEEEESCCS
T ss_pred cCCCcceeCcccccCceeeeeeccCCcc
Confidence 77777654444333 344455666644
No 296
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.72 E-value=4.3e-17 Score=159.03 Aligned_cols=160 Identities=25% Similarity=0.284 Sum_probs=132.6
Q ss_pred ccceeecCCCCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCccccc
Q 006178 60 WTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIG 139 (658)
Q Consensus 60 w~gv~C~~~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 139 (658)
|..-.|+. +.++.+++.++. +|..+. ++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..|.
T Consensus 14 ~~~~~Cs~-----~~v~c~~~~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~ 85 (229)
T 3e6j_A 14 PSQCSCSG-----TTVDCRSKRHAS-VPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFD 85 (229)
T ss_dssp CTTCEEET-----TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred CCCCEEeC-----CEeEccCCCcCc-cCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcc
Confidence 44556752 458999999875 565543 8999999999999999899999999999999999999865556689
Q ss_pred CCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEcc
Q 006178 140 NLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFS 219 (658)
Q Consensus 140 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls 219 (658)
.+++|+.|+|++|+|++..+..|..+++|++|+|++|+|+ .+|. .+..+++|+.|+|+
T Consensus 86 ~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~---------------------~~~~l~~L~~L~L~ 143 (229)
T 3e6j_A 86 SLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPR---------------------GIERLTHLTHLALD 143 (229)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCT---------------------TGGGCTTCSEEECC
T ss_pred cCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCc---------------------ccccCCCCCEEECC
Confidence 9999999999999999877777899999999999999998 6664 24567899999999
Q ss_pred CCcCcccCcccCCC---CCCCccCCCccCCCCc
Q 006178 220 YNFFVGSIPKCLEY---LPSTSFQGNCLQNKDP 249 (658)
Q Consensus 220 ~N~l~g~ip~~l~~---l~~~~~~~n~~~~~~~ 249 (658)
+|++++..+..+.. |..+.+.+|.+...++
T Consensus 144 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 144 QNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 99999666655554 5567789997776543
No 297
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.72 E-value=1.1e-17 Score=188.85 Aligned_cols=143 Identities=21% Similarity=0.168 Sum_probs=117.7
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
..++.|||++|.|++..+.+|.++++|++|+|++|+|++..|.+|.+|++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 46889999999999887888999999999999999999888888999999999999999999666677899999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCccc-CCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGA-VPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~-~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip 228 (658)
++|++++..+..|+++++|++|+|++|++++. +|. .+..+++|++|++++|++++..|
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~---------------------~~~~l~~L~~L~L~~N~l~~~~~ 190 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE---------------------YFSNLTNLEHLDLSSNKIQSIYC 190 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCG---------------------GGGGCTTCCEEECCSSCCCEECG
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCch---------------------hhccchhhhhhcccCcccccccc
Confidence 99999976667799999999999999998743 232 23445667777777777766666
Q ss_pred ccCCC
Q 006178 229 KCLEY 233 (658)
Q Consensus 229 ~~l~~ 233 (658)
..+..
T Consensus 191 ~~l~~ 195 (635)
T 4g8a_A 191 TDLRV 195 (635)
T ss_dssp GGGHH
T ss_pred ccccc
Confidence 55543
No 298
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.72 E-value=8.7e-18 Score=184.70 Aligned_cols=176 Identities=24% Similarity=0.322 Sum_probs=137.8
Q ss_pred CCCCCCCCCCCC-----Cccce-eecCCCCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCC
Q 006178 47 LSNWNALDADPC-----HWTGI-ACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRL 120 (658)
Q Consensus 47 l~~w~~~~~~~c-----~w~gv-~C~~~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L 120 (658)
+.+|.. +.+|| .|.|+ .|. ..+++.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|
T Consensus 33 l~~W~~-~~~~~~~~~~~~~~l~~C~--~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L 102 (571)
T 3cvr_A 33 WDKWEK-QALPGENRNEAVSLLKECL--INQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASL 102 (571)
T ss_dssp HHHHHT-TCCTTCCHHHHHHHHHHHH--HTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTC
T ss_pred HHHHhc-cCCccccccchhhhccccc--cCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCC
Confidence 345654 45678 79999 786 4579999999999998 777663 88999999999998 577 457899
Q ss_pred CEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccC
Q 006178 121 KILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYAS 200 (658)
Q Consensus 121 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~ 200 (658)
++|+|++|+|++ +|. +.+ +|+.|+|++|.|++ +|. .+++|+.|+|++|+|++ +|. ...++..++++
T Consensus 103 ~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~-----~l~~L~~L~Ls 168 (571)
T 3cvr_A 103 EYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE-----LPTSLEVLSVR 168 (571)
T ss_dssp CEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-----CCTTCCEEECC
T ss_pred CEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC-----cCCCcCEEECC
Confidence 999999999996 787 665 89999999999997 776 68899999999999986 665 23567788888
Q ss_pred CCCcccccCC-CCCcEEEccCCcCcccCcccCCCC-------CCCccCCCccCCC
Q 006178 201 SANLTGLCHL-SQLKVADFSYNFFVGSIPKCLEYL-------PSTSFQGNCLQNK 247 (658)
Q Consensus 201 ~n~l~~~~~l-~~L~~l~ls~N~l~g~ip~~l~~l-------~~~~~~~n~~~~~ 247 (658)
+|.++++..+ ++|+.|+|++|+|+ .+|....+| ..+++++|.+...
T Consensus 169 ~N~L~~lp~l~~~L~~L~Ls~N~L~-~lp~~~~~L~~~~~~L~~L~Ls~N~l~~l 222 (571)
T 3cvr_A 169 NNQLTFLPELPESLEALDVSTNLLE-SLPAVPVRNHHSEETEIFFRCRENRITHI 222 (571)
T ss_dssp SSCCSCCCCCCTTCCEEECCSSCCS-SCCCCC--------CCEEEECCSSCCCCC
T ss_pred CCCCCCcchhhCCCCEEECcCCCCC-chhhHHHhhhcccccceEEecCCCcceec
Confidence 8887764333 67889999999888 677622345 6677888877653
No 299
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.72 E-value=5.2e-17 Score=160.96 Aligned_cols=156 Identities=25% Similarity=0.229 Sum_probs=137.1
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
..++.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..+..+++|++|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 46899999999999988889999999999999999999988888999999999999999999777788899999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcCc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFV 224 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l~ 224 (658)
++|++++..+..|..+++|++|+|++|++++..+... . ...++..+++++|.+++ +..+++|+.|++++|.|+
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAF-D-KLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT-T-TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHc-C-cCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCcee
Confidence 9999997777778999999999999999995544322 1 23578889999999875 446789999999999998
Q ss_pred ccC
Q 006178 225 GSI 227 (658)
Q Consensus 225 g~i 227 (658)
+..
T Consensus 193 c~~ 195 (251)
T 3m19_A 193 CSR 195 (251)
T ss_dssp TTS
T ss_pred CCc
Confidence 763
No 300
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.72 E-value=2.9e-17 Score=173.96 Aligned_cols=171 Identities=19% Similarity=0.173 Sum_probs=117.5
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
..++.|++++|.++...+..+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..++++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 35677888888877655555778888888888888888777778888888888888888888777777888888888888
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc--ccCCCCCcEEEccCCcCcccC
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG--LCHLSQLKVADFSYNFFVGSI 227 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~--~~~l~~L~~l~ls~N~l~g~i 227 (658)
++|.++...+..|.++++|++|+|++|++++..|.... ...++..+++++|.+++ +..+++|+.|++++|.+++.
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~- 201 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQ--ATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTL- 201 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTS--SCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEE-
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhcc--CCCCCCEEECCCCcCCccccccccccceeeccccccccc-
Confidence 88888843334467888888888888888765554221 12456666777776654 34456666666666666532
Q ss_pred cccCCCCCCCccCCCcc
Q 006178 228 PKCLEYLPSTSFQGNCL 244 (658)
Q Consensus 228 p~~l~~l~~~~~~~n~~ 244 (658)
+ ....+..+++++|.+
T Consensus 202 ~-~~~~L~~L~l~~n~l 217 (390)
T 3o6n_A 202 A-IPIAVEELDASHNSI 217 (390)
T ss_dssp E-CCSSCSEEECCSSCC
T ss_pred C-CCCcceEEECCCCee
Confidence 1 112344445555543
No 301
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.71 E-value=4.3e-18 Score=174.56 Aligned_cols=175 Identities=19% Similarity=0.201 Sum_probs=132.6
Q ss_pred CCEEEEEecCCCCcccCCccc--cCCCCCcEEeccCCcccccCCcccCCC-----CCCCEEEccCCcCCCCCcccccCCc
Q 006178 70 DRVLKINISGSSLKGFLAPEL--GLLTYLQELILHGNNLIGIIPKELGLL-----KRLKILDLGTNQLTGPIPPEIGNLT 142 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~--~~l~~L~~L~L~~N~l~g~~p~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~~l~ 142 (658)
.+++.|+|++|.+++.+|..+ +.+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..++.++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 468888888888888888876 8888888888888888876 7777766 8888888888888877778888888
Q ss_pred ccceeecccccCCCC--Chhhh--cCCCCCCEEeCCCCCCcc--cCCCCCCCCccccccccccCCCCcccc------cCC
Q 006178 143 GLVKINLQSNGLTGR--LPAEL--GNLISLEELHLDRNRLQG--AVPAGSNSGYTANIHGMYASSANLTGL------CHL 210 (658)
Q Consensus 143 ~L~~L~Ls~N~l~g~--~p~~~--~~l~~L~~L~L~~N~l~g--~~p~~~~~~~~~~l~~~~l~~n~l~~~------~~l 210 (658)
+|++|+|++|+++|. +|..+ .++++|++|+|++|++++ .++.... ....++..+++++|.+++. ..+
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 252 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALA-AARVQLQGLDLSHNSLRDAAGAPSCDWP 252 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHH-HTTCCCSEEECTTSCCCSSCCCSCCCCC
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHH-hcCCCCCEEECCCCcCCcccchhhhhhc
Confidence 888888888888765 34455 788888888888888873 2221100 0113667778888887652 235
Q ss_pred CCCcEEEccCCcCcccCcccCC-CCCCCccCCCccCCC
Q 006178 211 SQLKVADFSYNFFVGSIPKCLE-YLPSTSFQGNCLQNK 247 (658)
Q Consensus 211 ~~L~~l~ls~N~l~g~ip~~l~-~l~~~~~~~n~~~~~ 247 (658)
++|+.|++++|.++ .+|..+. +|..+++++|.+.+.
T Consensus 253 ~~L~~L~Ls~N~l~-~ip~~~~~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 253 SQLNSLNLSFTGLK-QVPKGLPAKLSVLDLSYNRLDRN 289 (312)
T ss_dssp TTCCEEECTTSCCS-SCCSSCCSEEEEEECCSSCCCSC
T ss_pred CCCCEEECCCCccC-hhhhhccCCceEEECCCCCCCCC
Confidence 78888888888888 7777664 566778888877664
No 302
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.71 E-value=1.5e-17 Score=181.17 Aligned_cols=173 Identities=22% Similarity=0.195 Sum_probs=116.8
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcc--------------
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPP-------------- 136 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-------------- 136 (658)
+++.|+|++|.+++..|..|+.+++|++|+|++|.+++..| |..+++|++|+|++|.|++..+.
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~ 112 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNIS 112 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCC
Confidence 46666666666666555566666666666666666665444 55566666555555555421110
Q ss_pred --cccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccc---cCCC
Q 006178 137 --EIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLS 211 (658)
Q Consensus 137 --~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~---~~l~ 211 (658)
....+++|+.|+|++|.+++..|..++++++|++|+|++|.+++.+|..... ....+..+++++|.++++ ..++
T Consensus 113 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~-~l~~L~~L~Ls~N~l~~~~~~~~l~ 191 (487)
T 3oja_A 113 RVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAA-SSDTLEHLNLQYNFIYDVKGQVVFA 191 (487)
T ss_dssp CEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGG-GTTTCCEEECTTSCCCEEECCCCCT
T ss_pred CCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhh-hCCcccEEecCCCccccccccccCC
Confidence 0124577888888889988888888888999999999999998877654321 125677888888888753 3578
Q ss_pred CCcEEEccCCcCcccCcc--cCCCCCCCccCCCccCC
Q 006178 212 QLKVADFSYNFFVGSIPK--CLEYLPSTSFQGNCLQN 246 (658)
Q Consensus 212 ~L~~l~ls~N~l~g~ip~--~l~~l~~~~~~~n~~~~ 246 (658)
+|+.|+|++|.+++..|. .+.+|..+++++|.+.+
T Consensus 192 ~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~ 228 (487)
T 3oja_A 192 KLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL 228 (487)
T ss_dssp TCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE
T ss_pred CCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc
Confidence 889999999999875553 13455667888887765
No 303
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.71 E-value=3.3e-17 Score=190.83 Aligned_cols=190 Identities=21% Similarity=0.203 Sum_probs=157.9
Q ss_pred CCCccceeecCCCCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccC-CcccCCCCCCCEEEccCCcCCCCCc
Q 006178 57 PCHWTGIACSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGII-PKELGLLKRLKILDLGTNQLTGPIP 135 (658)
Q Consensus 57 ~c~w~gv~C~~~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~~p 135 (658)
.|.|..|.+ ...+++.|+|++|.+++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|
T Consensus 13 ~~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 13 FCNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP 90 (844)
T ss_dssp CCCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT
T ss_pred CCCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH
Confidence 356777777 3678999999999999999999999999999999999777666 7889999999999999999998889
Q ss_pred ccccCCcccceeecccccCCCCChhh--hcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccc-----c
Q 006178 136 PEIGNLTGLVKINLQSNGLTGRLPAE--LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----C 208 (658)
Q Consensus 136 ~~~~~l~~L~~L~Ls~N~l~g~~p~~--~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~-----~ 208 (658)
..|+++++|++|+|++|.+++.+|.. |+++++|++|+|++|++++..|.... ....++..+++++|.+++. .
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~-~~L~~L~~L~Ls~N~i~~~~~~~l~ 169 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSF-GKLNSLKSIDFSSNQIFLVCEHELE 169 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGG-GTCSSCCEEEEESSCCCCCCSGGGH
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhH-hhCCCCCEEECCCCcCCeeCHHHcc
Confidence 99999999999999999999877776 99999999999999999976554221 2235677888888887653 3
Q ss_pred CC--CCCcEEEccCCcCcccCcccCCC---------CCCCccCCCccCCCCc
Q 006178 209 HL--SQLKVADFSYNFFVGSIPKCLEY---------LPSTSFQGNCLQNKDP 249 (658)
Q Consensus 209 ~l--~~L~~l~ls~N~l~g~ip~~l~~---------l~~~~~~~n~~~~~~~ 249 (658)
.+ ++|+.|+++.|.+++.+|..+.. +..+++++|.+.+..+
T Consensus 170 ~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~ 221 (844)
T 3j0a_A 170 PLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDIT 221 (844)
T ss_dssp HHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTT
T ss_pred cccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHH
Confidence 33 78999999999999888876554 4556778887665443
No 304
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.71 E-value=5.8e-17 Score=175.18 Aligned_cols=173 Identities=16% Similarity=0.145 Sum_probs=117.1
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..+++.|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|+.|+
T Consensus 98 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 177 (452)
T 3zyi_A 98 LHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLD 177 (452)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEe
Confidence 35789999999999998888999999999999999999987777799999999999999999865556777788888888
Q ss_pred cccccCCCCCh-hhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCc
Q 006178 149 LQSNGLTGRLP-AELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNF 222 (658)
Q Consensus 149 Ls~N~l~g~~p-~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~ 222 (658)
|++|...+.+| ..|.++++|++|+|++|++++ +|... ...++..+++++|.+++ +.++++|+.|++++|+
T Consensus 178 l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~---~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~ 253 (452)
T 3zyi_A 178 LGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MPNLT---PLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQ 253 (452)
T ss_dssp CCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CCCCT---TCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSC
T ss_pred CCCCCCccccChhhccCCCCCCEEECCCCcccc-ccccc---ccccccEEECcCCcCcccCcccccCccCCCEEEeCCCc
Confidence 87743333444 356777777777777777763 34311 12344555555555443 3344555555555555
Q ss_pred CcccCcccCCC---CCCCccCCCccC
Q 006178 223 FVGSIPKCLEY---LPSTSFQGNCLQ 245 (658)
Q Consensus 223 l~g~ip~~l~~---l~~~~~~~n~~~ 245 (658)
+++..|..+.. |..+++++|.+.
T Consensus 254 l~~~~~~~~~~l~~L~~L~L~~N~l~ 279 (452)
T 3zyi_A 254 VSLIERNAFDGLASLVELNLAHNNLS 279 (452)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred CceECHHHhcCCCCCCEEECCCCcCC
Confidence 55444443332 223344444444
No 305
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=4.7e-17 Score=154.13 Aligned_cols=131 Identities=26% Similarity=0.340 Sum_probs=109.0
Q ss_pred EEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCc-ccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccc
Q 006178 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPK-ELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (658)
Q Consensus 74 ~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 152 (658)
.+++++|+++ .+|..+.. +|++|+|++|++++..|. .|..+++|++|+|++|+|++..|..|.++++|+.|+|++|
T Consensus 12 ~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 4666677774 46665543 899999999999876664 4889999999999999999888899999999999999999
Q ss_pred cCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCc
Q 006178 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (658)
Q Consensus 153 ~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip 228 (658)
+|++..|..|.++++|++|+|++|++++.+|. .+..+++|++|++++|.|++..+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~---------------------~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPG---------------------SFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTT---------------------SSTTCTTCCEEECTTCCBCCSGG
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHH---------------------HhhcCCCCCEEEeCCCCccCcCc
Confidence 99988888899999999999999999987764 24557788999999999887765
No 306
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.71 E-value=6.3e-17 Score=174.26 Aligned_cols=173 Identities=17% Similarity=0.141 Sum_probs=113.0
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|.++++|+.|+|
T Consensus 88 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l 167 (440)
T 3zyj_A 88 RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL 167 (440)
T ss_dssp SSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCC
Confidence 47888999999998887788889999999999999998766677888999999999999888655556777777777777
Q ss_pred ccccCCCCCh-hhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcC
Q 006178 150 QSNGLTGRLP-AELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFF 223 (658)
Q Consensus 150 s~N~l~g~~p-~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l 223 (658)
++|+..+.+| ..|.++++|++|+|++|+++ .+|.. ....++..+++++|.+++ +.++++|+.|++++|++
T Consensus 168 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~---~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l 243 (440)
T 3zyj_A 168 GELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPNL---TPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQI 243 (440)
T ss_dssp CCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCCC---TTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CCCCCcceeCcchhhcccccCeecCCCCcCc-ccccc---CCCcccCEEECCCCccCccChhhhccCccCCEEECCCCce
Confidence 7743333333 35667777777777777766 44431 112344555555555443 23445555555555555
Q ss_pred cccCcccCCC---CCCCccCCCccCC
Q 006178 224 VGSIPKCLEY---LPSTSFQGNCLQN 246 (658)
Q Consensus 224 ~g~ip~~l~~---l~~~~~~~n~~~~ 246 (658)
++..|..+.. |..+++++|.+..
T Consensus 244 ~~~~~~~~~~l~~L~~L~L~~N~l~~ 269 (440)
T 3zyj_A 244 QVIERNAFDNLQSLVEINLAHNNLTL 269 (440)
T ss_dssp CEECTTSSTTCTTCCEEECTTSCCCC
T ss_pred eEEChhhhcCCCCCCEEECCCCCCCc
Confidence 5444443332 2233444444443
No 307
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.71 E-value=3.8e-17 Score=176.79 Aligned_cols=177 Identities=21% Similarity=0.285 Sum_probs=120.3
Q ss_pred CCEEEEEecCCCCcccCCcc--ccCCCCCcEEeccCCcccccCCcc-cCCCCCCCEEEccCCcCCCCCcccccCC-----
Q 006178 70 DRVLKINISGSSLKGFLAPE--LGLLTYLQELILHGNNLIGIIPKE-LGLLKRLKILDLGTNQLTGPIPPEIGNL----- 141 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~--~~~l~~L~~L~L~~N~l~g~~p~~-~~~l~~L~~L~Ls~N~l~g~~p~~~~~l----- 141 (658)
.+++.|+|++|.+++.++.. ++.+++|++|+|++|++++..|.. +.++++|++|+|++|++++..|..+..+
T Consensus 103 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L 182 (455)
T 3v47_A 103 ANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHF 182 (455)
T ss_dssp TTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEE
T ss_pred ccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccc
Confidence 45677777777777655444 677777777777777777666655 6677777777777777766555443322
Q ss_pred --------------------------------------------------------------------------------
Q 006178 142 -------------------------------------------------------------------------------- 141 (658)
Q Consensus 142 -------------------------------------------------------------------------------- 141 (658)
T Consensus 183 ~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~ 262 (455)
T 3v47_A 183 TLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFK 262 (455)
T ss_dssp EEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSC
T ss_pred cccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhc
Confidence
Q ss_pred ------------cccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---
Q 006178 142 ------------TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG--- 206 (658)
Q Consensus 142 ------------~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~--- 206 (658)
++|+.|+|++|.+++.+|..++++++|++|+|++|++++..|..... ...+..+++++|.+++
T Consensus 263 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~Ls~N~l~~~~~ 340 (455)
T 3v47_A 263 DPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWG--LTHLLKLNLSQNFLGSIDS 340 (455)
T ss_dssp CCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTT--CTTCCEEECCSSCCCEECG
T ss_pred cCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcC--cccCCEEECCCCccCCcCh
Confidence 34556666666666667888888888888888888888766653321 2466777788877754
Q ss_pred --ccCCCCCcEEEccCCcCcccCcccCCCC---CCCccCCCccCCCC
Q 006178 207 --LCHLSQLKVADFSYNFFVGSIPKCLEYL---PSTSFQGNCLQNKD 248 (658)
Q Consensus 207 --~~~l~~L~~l~ls~N~l~g~ip~~l~~l---~~~~~~~n~~~~~~ 248 (658)
+..+++|+.|++++|.+++..|..+..+ ..+++++|.+....
T Consensus 341 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 387 (455)
T 3v47_A 341 RMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVP 387 (455)
T ss_dssp GGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred hHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCC
Confidence 4567788888888888887777666544 44567777776643
No 308
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.70 E-value=5.1e-17 Score=185.07 Aligned_cols=163 Identities=21% Similarity=0.222 Sum_probs=141.6
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..+++.|+|++|.+++..+..|+.+++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|+++++|++|+
T Consensus 24 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp CTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 35799999999999998888899999999999999999999999999999999999999999965555799999999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccc-------cCCCCCcEEEccCC
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-------CHLSQLKVADFSYN 221 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~-------~~l~~L~~l~ls~N 221 (658)
|++|++++..|..|+++++|++|+|++|.+++..|.... ...++..++++.|.++++ ..+++|+.|++++|
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n 181 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQV--QLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSN 181 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSS--CCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhc--ccccCCEEEccCCcccccCHHHhhccccccccEEECCCC
Confidence 999999987778999999999999999999987665432 235788889999988764 24588999999999
Q ss_pred cCcccCcccCCC
Q 006178 222 FFVGSIPKCLEY 233 (658)
Q Consensus 222 ~l~g~ip~~l~~ 233 (658)
.+++..|.++..
T Consensus 182 ~l~~~~~~~~~~ 193 (680)
T 1ziw_A 182 QIKEFSPGCFHA 193 (680)
T ss_dssp CCCCBCTTGGGG
T ss_pred cccccChhhhhh
Confidence 999888876543
No 309
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.70 E-value=4.2e-17 Score=183.23 Aligned_cols=160 Identities=19% Similarity=0.160 Sum_probs=142.5
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
..++.|+|++|.+++..|..|+.+++|++|+|++|++.+..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 47899999999999998999999999999999999999999999999999999999999999888999999999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCccc-CCCCCCCCccccccccccCCCCccc-----ccCCCCCc--EEEccCC
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGA-VPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLK--VADFSYN 221 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~-~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~--~l~ls~N 221 (658)
++|.+++..|..++++++|++|+|++|++++. +|.... ..++..+++++|.+++ +..+++|+ .|++++|
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~---l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n 189 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFP---TEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGN 189 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCC---CTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccC---CcccCEEEcccCcccccChhhhhhhcccceeEEecCCC
Confidence 99999987688899999999999999999963 344322 4678888999998875 45688888 8999999
Q ss_pred cCcccCcccCC
Q 006178 222 FFVGSIPKCLE 232 (658)
Q Consensus 222 ~l~g~ip~~l~ 232 (658)
.+++..|..+.
T Consensus 190 ~l~~~~~~~~~ 200 (606)
T 3t6q_A 190 DIAGIEPGAFD 200 (606)
T ss_dssp CCCEECTTTTT
T ss_pred ccCccChhHhh
Confidence 99988876654
No 310
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.70 E-value=4.5e-17 Score=181.18 Aligned_cols=154 Identities=19% Similarity=0.190 Sum_probs=110.2
Q ss_pred cCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCC--CCcccccCCcccceeecccccCCCCChhh-hcCCCC
Q 006178 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG--PIPPEIGNLTGLVKINLQSNGLTGRLPAE-LGNLIS 167 (658)
Q Consensus 91 ~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~ 167 (658)
..+++|++|+|++|++++.+|..+.++++|++|+|++|++++ .+|..++++++|+.|+|++|++++.+|.. +..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 567778888888888887777778888888888888888775 23456777888888888888887756553 677788
Q ss_pred CCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccc----cCCCCCcEEEccCCcCcccCccc-CCC---CCCCcc
Q 006178 168 LEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL----CHLSQLKVADFSYNFFVGSIPKC-LEY---LPSTSF 239 (658)
Q Consensus 168 L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~----~~l~~L~~l~ls~N~l~g~ip~~-l~~---l~~~~~ 239 (658)
|++|+|++|++++.+|.... ..+..+++++|.++.+ ..+++|+.|++++|+++ .+|.. +.. +..+++
T Consensus 430 L~~L~l~~n~l~~~~~~~l~----~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l 504 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP----PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWL 504 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC----TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEEC
T ss_pred CCEEECCCCCCCcchhhhhc----CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEe
Confidence 88888888888777665322 3566777788777643 35678888888888888 56654 443 445677
Q ss_pred CCCccCCCCc
Q 006178 240 QGNCLQNKDP 249 (658)
Q Consensus 240 ~~n~~~~~~~ 249 (658)
++|.+.+.|+
T Consensus 505 ~~N~~~c~c~ 514 (562)
T 3a79_B 505 HDNPWDCTCP 514 (562)
T ss_dssp CSCCBCCCHH
T ss_pred cCCCcCCCcc
Confidence 7887766543
No 311
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.70 E-value=2e-16 Score=158.58 Aligned_cols=156 Identities=22% Similarity=0.223 Sum_probs=134.0
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|+|++|.+++..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..|..|..+++|++|+|
T Consensus 61 ~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 140 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSL 140 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEEC
Confidence 57899999999999866667799999999999999999877778899999999999999999887788999999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcCc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFV 224 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l~ 224 (658)
++|.+++..+..|..+++|++|+|++|++++..+.. .. ...++..++++.|.++. +..+++|+.|++++|.+.
T Consensus 141 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 141 GYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGA-FD-KLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT-TT-TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCCcCCccCHhHccCCcccceeEecCCcCcEeChhH-hc-cCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 999999766667999999999999999998644432 22 23577888999998875 446789999999999987
Q ss_pred ccC
Q 006178 225 GSI 227 (658)
Q Consensus 225 g~i 227 (658)
..-
T Consensus 219 c~c 221 (270)
T 2o6q_A 219 CTC 221 (270)
T ss_dssp CSS
T ss_pred CCC
Confidence 543
No 312
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=3.4e-17 Score=155.11 Aligned_cols=126 Identities=24% Similarity=0.329 Sum_probs=114.9
Q ss_pred CCccceeecCC---------CCCEEEEEecCCCCcccCCc-cccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccC
Q 006178 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAP-ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGT 127 (658)
Q Consensus 58 c~w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~ 127 (658)
|.|+.+.|+.. ...++.|+|++|.+++..+. .++.+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 77888888641 23789999999999987665 489999999999999999999999999999999999999
Q ss_pred CcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCC
Q 006178 128 NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (658)
Q Consensus 128 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p 183 (658)
|+|++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99998888889999999999999999999999999999999999999999987654
No 313
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.69 E-value=3.4e-18 Score=194.79 Aligned_cols=195 Identities=21% Similarity=0.137 Sum_probs=79.0
Q ss_pred hhHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCccceeecCCCCCEEEEEecCCCCccc--------------------
Q 006178 26 TNEFWALTTFKEAIYEDPHLVLSNWNALDADPCHWTGIACSDARDRVLKINISGSSLKGF-------------------- 85 (658)
Q Consensus 26 ~~~~~~l~~~k~~~~~~~~~~l~~w~~~~~~~c~w~gv~C~~~~~~v~~l~L~~n~l~g~-------------------- 85 (658)
..++.+|+++..+........-..|.......+.|.++.++ .++++.|+|.+|.+...
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~ 208 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVS--TPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDD 208 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceec--CCccceEEeeCCCCCcchhhHhhcCccCcccccCccc
Confidence 45677888888877533333334565444456789988886 35666666666655442
Q ss_pred -------CCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCC
Q 006178 86 -------LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRL 158 (658)
Q Consensus 86 -------~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~ 158 (658)
.+..+..++.|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|++|++|++|+|++|.|+ .+
T Consensus 209 ~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~l 285 (727)
T 4b8c_D 209 IENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SL 285 (727)
T ss_dssp -------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SC
T ss_pred cccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-cc
Confidence 1233444444444444444444 34444444444444444444444 44444444444444444444444 44
Q ss_pred hhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCcccCCCCC---
Q 006178 159 PAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKCLEYLP--- 235 (658)
Q Consensus 159 p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip~~l~~l~--- 235 (658)
|..|++|++|++|+|++|.|+ .+|. ++..+++|+.|+|++|.|+|.+|..+..+.
T Consensus 286 p~~~~~l~~L~~L~L~~N~l~-~lp~---------------------~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~ 343 (727)
T 4b8c_D 286 PAELGSCFQLKYFYFFDNMVT-TLPW---------------------EFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTG 343 (727)
T ss_dssp CSSGGGGTTCSEEECCSSCCC-CCCS---------------------STTSCTTCCCEECTTSCCCSHHHHHHHHHHHHH
T ss_pred ChhhcCCCCCCEEECCCCCCC-ccCh---------------------hhhcCCCccEEeCCCCccCCCChHHHhhcchhh
Confidence 444444444444444444443 3333 244566777777777777777666554321
Q ss_pred -CCccCCCccCCC
Q 006178 236 -STSFQGNCLQNK 247 (658)
Q Consensus 236 -~~~~~~n~~~~~ 247 (658)
.+.+.+|.+.+.
T Consensus 344 ~~l~l~~N~l~~~ 356 (727)
T 4b8c_D 344 LIFYLRDNRPEIP 356 (727)
T ss_dssp HHHHHHHCCCCCC
T ss_pred hHHhhccCcccCc
Confidence 134455555443
No 314
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.69 E-value=3.1e-17 Score=180.74 Aligned_cols=152 Identities=18% Similarity=0.187 Sum_probs=73.4
Q ss_pred cCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCC--CCcccccCCcccceeecccccCCCCChhh-hcCCCC
Q 006178 91 GLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG--PIPPEIGNLTGLVKINLQSNGLTGRLPAE-LGNLIS 167 (658)
Q Consensus 91 ~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~ 167 (658)
..+++|++|+|++|++++.+|..+..+++|++|+|++|++++ .+|..++.+++|+.|+|++|.+++.+|.. +..+++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 344455555555555555455555555555555555555543 33344555555555555555555434432 444455
Q ss_pred CCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc----ccCCCCCcEEEccCCcCcccCccc-CCC---CCCCcc
Q 006178 168 LEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG----LCHLSQLKVADFSYNFFVGSIPKC-LEY---LPSTSF 239 (658)
Q Consensus 168 L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~----~~~l~~L~~l~ls~N~l~g~ip~~-l~~---l~~~~~ 239 (658)
|++|+|++|++++.+|.... ..+..+++++|.++. +..+++|+.|++++|+++ .+|.. +.. +..+++
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~----~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l 475 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLP----PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWL 475 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCC----TTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEEC
T ss_pred CCEEECcCCCCCcchhhhhc----ccCCEEECCCCcccccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEEC
Confidence 55555555555544443211 244445555555443 224555555555555555 34433 322 333445
Q ss_pred CCCccCCC
Q 006178 240 QGNCLQNK 247 (658)
Q Consensus 240 ~~n~~~~~ 247 (658)
++|.+.+.
T Consensus 476 ~~N~~~c~ 483 (520)
T 2z7x_B 476 HTNPWDCS 483 (520)
T ss_dssp CSSCBCCC
T ss_pred cCCCCccc
Confidence 55554443
No 315
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.69 E-value=1.4e-16 Score=152.96 Aligned_cols=166 Identities=20% Similarity=0.139 Sum_probs=122.1
Q ss_pred EEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccc
Q 006178 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (658)
Q Consensus 73 ~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 152 (658)
+.++++++.++. +|..+ .++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 468889988876 45433 568999999999999877777899999999999999999666666899999999999999
Q ss_pred cCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcCcccC
Q 006178 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFFVGSI 227 (658)
Q Consensus 153 ~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l~g~i 227 (658)
++++..+..|.++++|++|+|++|++++..+... . ...++..++++.|.+++ +..+++|+.|++++|.+.+..
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~-~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 164 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVF-D-KLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 164 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT-T-TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCT
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHh-c-cCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCC
Confidence 9997767778999999999999999985444321 1 12345556666666543 334566666666666666544
Q ss_pred cccCCCCCCCccCCCccCCC
Q 006178 228 PKCLEYLPSTSFQGNCLQNK 247 (658)
Q Consensus 228 p~~l~~l~~~~~~~n~~~~~ 247 (658)
| .+..+....|.+.+.
T Consensus 165 ~----~l~~L~~~~n~~~g~ 180 (208)
T 2o6s_A 165 P----GIRYLSEWINKHSGV 180 (208)
T ss_dssp T----TTHHHHHHHHHCTTT
T ss_pred C----CHHHHHHHHHhCCce
Confidence 3 233344445544443
No 316
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.69 E-value=1e-16 Score=180.12 Aligned_cols=176 Identities=18% Similarity=0.154 Sum_probs=117.1
Q ss_pred CCEEEEEecCCCCcccCCcc-ccCCCCCcEEeccCCcccccC--CcccCCCCCCCEEEccCCcCCCCCcccccCCcccce
Q 006178 70 DRVLKINISGSSLKGFLAPE-LGLLTYLQELILHGNNLIGII--PKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVK 146 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~-~~~l~~L~~L~L~~N~l~g~~--p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 146 (658)
..++.|+|++|.+.+.+|.. +..+++|++|+|++|.+.+.. |..+..+++|++|+|++|.+++..|..+..+++|+.
T Consensus 325 ~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 404 (606)
T 3t6q_A 325 PSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLEL 404 (606)
T ss_dssp TTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSE
T ss_pred CcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCe
Confidence 45777778777777666654 777777777777777777654 666777777777777777777666777777777777
Q ss_pred eecccccCCCCChhh-hcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc--------ccCCCCCcEEE
Q 006178 147 INLQSNGLTGRLPAE-LGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG--------LCHLSQLKVAD 217 (658)
Q Consensus 147 L~Ls~N~l~g~~p~~-~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~--------~~~l~~L~~l~ 217 (658)
|+|++|.+++..|.. +.++++|++|++++|.+++..|..... ..++..+++++|.+++ +..+++|+.|+
T Consensus 405 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~ 482 (606)
T 3t6q_A 405 LDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDG--LPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILV 482 (606)
T ss_dssp EECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTT--CTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEE
T ss_pred EECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhC--CCCCCEEECCCCCCCccccccchhhccCCCccEEE
Confidence 777777777665543 677777777777777777655543211 2455666666666543 44566677777
Q ss_pred ccCCcCcccCcccCCCC---CCCccCCCccCCC
Q 006178 218 FSYNFFVGSIPKCLEYL---PSTSFQGNCLQNK 247 (658)
Q Consensus 218 ls~N~l~g~ip~~l~~l---~~~~~~~n~~~~~ 247 (658)
+++|.+++..|..+..+ ..+++++|.+.+.
T Consensus 483 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 515 (606)
T 3t6q_A 483 LSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSS 515 (606)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCCGG
T ss_pred CCCCccCccChhhhccccCCCEEECCCCccCcC
Confidence 77777776666655443 3345666655543
No 317
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.69 E-value=4.8e-17 Score=182.75 Aligned_cols=174 Identities=17% Similarity=0.098 Sum_probs=132.1
Q ss_pred CCEEEEEecCCCCccc--CCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCc-ccccCCcccce
Q 006178 70 DRVLKINISGSSLKGF--LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP-PEIGNLTGLVK 146 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~--~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~ 146 (658)
.+++.|+|++|.+++. +|..+..+++|++|+|++|.+.+ +|..+..+++|+.|++++|++++..| ..+..+++|+.
T Consensus 350 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 428 (606)
T 3vq2_A 350 PSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428 (606)
T ss_dssp TTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCE
T ss_pred CCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCE
Confidence 4688888888888876 47778888888888888888875 56778888888888888888887766 57788888888
Q ss_pred eecccccCCCCChhhhcCCCCCCEEeCCCCCCccc-CCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccC
Q 006178 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQGA-VPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSY 220 (658)
Q Consensus 147 L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~-~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~ 220 (658)
|++++|.+++..|..+.++++|++|++++|++++. +|.... ...++..+++++|.+++ +..+++|+.|++++
T Consensus 429 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 506 (606)
T 3vq2_A 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFA--NTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSH 506 (606)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCT--TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhc--cCCCCCEEECCCCcCCccChhhhcccccCCEEECCC
Confidence 88888888888888888888888888888888874 454322 12466777778877654 45677888888888
Q ss_pred CcCcccCcccCCCC---CCCccCCCccCC
Q 006178 221 NFFVGSIPKCLEYL---PSTSFQGNCLQN 246 (658)
Q Consensus 221 N~l~g~ip~~l~~l---~~~~~~~n~~~~ 246 (658)
|++++.+|..+..+ ..+++++|.+..
T Consensus 507 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 535 (606)
T 3vq2_A 507 NNLLFLDSSHYNQLYSLSTLDCSFNRIET 535 (606)
T ss_dssp SCCSCEEGGGTTTCTTCCEEECTTSCCCC
T ss_pred CcCCCcCHHHccCCCcCCEEECCCCcCcc
Confidence 88887777776554 446677776664
No 318
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.69 E-value=4e-17 Score=170.45 Aligned_cols=133 Identities=20% Similarity=0.193 Sum_probs=106.7
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcc--cccCCcccce
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPP--EIGNLTGLVK 146 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~ 146 (658)
..+++.|+|++|.+++..|..|+.+++|++|+|++|++++..+..|.++++|++|+|++|+++ .+|. .+..+++|+.
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~ 153 (353)
T 2z80_A 75 CVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQI 153 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCE
T ss_pred CCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcE
Confidence 357899999999999988888999999999999999999755555899999999999999998 4555 7889999999
Q ss_pred eecccc-cCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCc
Q 006178 147 INLQSN-GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL 204 (658)
Q Consensus 147 L~Ls~N-~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l 204 (658)
|++++| .+++..|..|.++++|++|++++|++++..|..... ..++..++++.|.+
T Consensus 154 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~--l~~L~~L~l~~n~l 210 (353)
T 2z80_A 154 LRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKS--IQNVSHLILHMKQH 210 (353)
T ss_dssp EEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT--CSEEEEEEEECSCS
T ss_pred EECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhc--cccCCeecCCCCcc
Confidence 999998 477666778999999999999999998877764322 12344444444443
No 319
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.69 E-value=2.2e-16 Score=159.87 Aligned_cols=171 Identities=25% Similarity=0.243 Sum_probs=140.8
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
...++.+++++++++. +|+.+. +.|+.|+|++|.+++..|..|..+++|++|+|++|.+++ +|.. +.+++|+.|+
T Consensus 9 l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~~L~ 83 (290)
T 1p9a_G 9 VASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLGTLD 83 (290)
T ss_dssp STTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTCCEEE
T ss_pred cCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcCCEEE
Confidence 3468899999999986 666554 789999999999999889999999999999999999985 4543 8899999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcC
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFF 223 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l 223 (658)
|++|+++ .+|..+..+++|++|+|++|++++..|... . ...++..+++++|.+++ +..+++|+.|+|++|++
T Consensus 84 Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~-~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 84 LSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGAL-R-GLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp CCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTT-T-TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred CCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHH-c-CCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 9999999 789999999999999999999995544322 2 23578888999998875 35678999999999999
Q ss_pred cccCcccC---CCCCCCccCCCccCCC
Q 006178 224 VGSIPKCL---EYLPSTSFQGNCLQNK 247 (658)
Q Consensus 224 ~g~ip~~l---~~l~~~~~~~n~~~~~ 247 (658)
++..+..+ .+|..+++++|.+...
T Consensus 161 ~~l~~~~~~~l~~L~~L~L~~N~l~~i 187 (290)
T 1p9a_G 161 TELPAGLLNGLENLDTLLLQENSLYTI 187 (290)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CccCHHHhcCcCCCCEEECCCCcCCcc
Confidence 95544444 4556678899977753
No 320
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.68 E-value=3.3e-17 Score=190.83 Aligned_cols=85 Identities=21% Similarity=0.179 Sum_probs=49.1
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
+++.|+|++|.+++..|..|..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..|..+++|+.|+|+
T Consensus 291 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls 370 (844)
T 3j0a_A 291 DLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLR 370 (844)
T ss_dssp CCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEE
T ss_pred CCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECC
Confidence 45555555555555555555555666666666666555555555556666666666666554444455555666666665
Q ss_pred cccCC
Q 006178 151 SNGLT 155 (658)
Q Consensus 151 ~N~l~ 155 (658)
+|.++
T Consensus 371 ~N~l~ 375 (844)
T 3j0a_A 371 DNALT 375 (844)
T ss_dssp TCCSC
T ss_pred CCCCC
Confidence 55554
No 321
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.68 E-value=1.3e-16 Score=149.03 Aligned_cols=126 Identities=24% Similarity=0.325 Sum_probs=95.7
Q ss_pred CCccceeecCC---------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCC
Q 006178 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN 128 (658)
Q Consensus 58 c~w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N 128 (658)
|.|.++.|+.. ...++.|+|++|.+++..+..++.+++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 7 C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp EETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 78999999641 236778888888888766666778888888888888888666666778888888888888
Q ss_pred cCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCC
Q 006178 129 QLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (658)
Q Consensus 129 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p 183 (658)
++++..+..+..+++|+.|+|++|.+++..+..+..+++|++|+|++|.+++..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 8886656667788888888888888886555556778888888888888876554
No 322
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.67 E-value=1.7e-16 Score=151.02 Aligned_cols=149 Identities=13% Similarity=0.175 Sum_probs=115.6
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|++++|.++. +| .+..+++|++|+|++|.++ .+..+..+++|++|+|++|++++..|..++.+++|++|+|
T Consensus 44 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 368899999999984 55 6999999999999999775 3457899999999999999999888999999999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCc-
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP- 228 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip- 228 (658)
++|.+++..|..++.+++|++|+|++|++.+.+|. +..+++|+.|++++|.+++..+
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~----------------------l~~l~~L~~L~l~~n~i~~~~~l 177 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMP----------------------LKTLPELKSLNIQFDGVHDYRGI 177 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGG----------------------GGGCSSCCEEECTTBCCCCCTTG
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccHh----------------------hcCCCCCCEEECCCCCCcChHHh
Confidence 99999988899999999999999999983334442 3345566666666666654211
Q ss_pred ccCCCCCCCccCCCcc
Q 006178 229 KCLEYLPSTSFQGNCL 244 (658)
Q Consensus 229 ~~l~~l~~~~~~~n~~ 244 (658)
..+.+|..+++.+|.+
T Consensus 178 ~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 178 EDFPKLNQLYAFSQTI 193 (197)
T ss_dssp GGCSSCCEEEECBC--
T ss_pred ccCCCCCEEEeeCccc
Confidence 1233444455555543
No 323
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.67 E-value=1.7e-16 Score=172.79 Aligned_cols=178 Identities=21% Similarity=0.211 Sum_probs=129.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|+|++|.+++..+..|..+++|++|+|++|.+.+..|..|..+++|+.|+|++|.+++..|..|.++++|+.|+|
T Consensus 80 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 159 (477)
T 2id5_A 80 FNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTL 159 (477)
T ss_dssp TTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEE
T ss_pred ccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEEC
Confidence 47889999999998866667888999999999999999888888999999999999999998877888888999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCC----------------------ccccccccccCCCCccc-
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSG----------------------YTANIHGMYASSANLTG- 206 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~----------------------~~~~l~~~~l~~n~l~~- 206 (658)
++|++++..+..|.++++|+.|+|++|++++..+...... ...++..+++++|.++.
T Consensus 160 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 239 (477)
T 2id5_A 160 EKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAV 239 (477)
T ss_dssp ESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSC
T ss_pred CCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCccccc
Confidence 9999987767778888888888888888876544321110 00134445555565543
Q ss_pred ----ccCCCCCcEEEccCCcCcccCcccCCC---CCCCccCCCccCCC
Q 006178 207 ----LCHLSQLKVADFSYNFFVGSIPKCLEY---LPSTSFQGNCLQNK 247 (658)
Q Consensus 207 ----~~~l~~L~~l~ls~N~l~g~ip~~l~~---l~~~~~~~n~~~~~ 247 (658)
+.++++|+.|+|++|.+++..+..+.. |..+.+++|.+...
T Consensus 240 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 287 (477)
T 2id5_A 240 PYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVV 287 (477)
T ss_dssp CHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEE
T ss_pred CHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceE
Confidence 335667777777777776555554443 34455666655543
No 324
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.67 E-value=8e-17 Score=166.29 Aligned_cols=137 Identities=10% Similarity=0.066 Sum_probs=96.6
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccc----------cchhhH--------HHHHHHHHHHHhccCCCccce
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEH----------WTGYLE--------LYFQREVADLARINHENTGKL 423 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~----------~~~~~~--------~~~~~E~~~l~~l~H~nIv~l 423 (658)
+.+.||+|+||.||+|...+|+.||||.+...... ...... ....+|...|.++.+..+.-.
T Consensus 99 I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp 178 (397)
T 4gyi_A 99 VGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVP 178 (397)
T ss_dssp EEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCC
T ss_pred ecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 44789999999999999999999999986432100 000001 112356667777755443222
Q ss_pred eeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCC
Q 006178 424 LGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFS 503 (658)
Q Consensus 424 ~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~ 503 (658)
.-+... ..+|||||+++++|.++... .....++.|++.+|.|||+. +||||||||.|||+++++.
T Consensus 179 ~p~~~~----~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 179 EPIAQS----RHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKD 243 (397)
T ss_dssp CEEEEE----TTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEEC
T ss_pred eeeecc----CceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCC
Confidence 222222 23799999999888776431 12456889999999999998 9999999999999988763
Q ss_pred ----------ceeccccchh
Q 006178 504 ----------PKLVDFDSWK 513 (658)
Q Consensus 504 ----------~kl~DFGla~ 513 (658)
+.|+||+-+.
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V 263 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMV 263 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCE
T ss_pred cccccccccceEEEEeCCcc
Confidence 7899998553
No 325
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.67 E-value=9.9e-17 Score=182.71 Aligned_cols=113 Identities=20% Similarity=0.246 Sum_probs=74.9
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
+++.|+|++|.+++..|..|+.+++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 50 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 129 (680)
T 1ziw_A 50 QLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLS 129 (680)
T ss_dssp TCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECC
T ss_pred cCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECC
Confidence 56667777777766666666667777777777776665444456667777777777776665555666666777777777
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCCCcccCC
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p 183 (658)
+|.+++..|..++++++|++|++++|++++..|
T Consensus 130 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 162 (680)
T 1ziw_A 130 HNGLSSTKLGTQVQLENLQELLLSNNKIQALKS 162 (680)
T ss_dssp SSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCH
T ss_pred CCcccccCchhhcccccCCEEEccCCcccccCH
Confidence 776666666666666666666666666664433
No 326
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.66 E-value=4.7e-16 Score=160.73 Aligned_cols=170 Identities=18% Similarity=0.252 Sum_probs=141.0
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..+++.|+|++|.+++..|..|+.+++|++|+|++|.++ .+|..+. ++|++|++++|.+++..+..+.++++|+.|+
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 151 (330)
T 1xku_A 75 LKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVE 151 (330)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEE
Confidence 357999999999999988999999999999999999998 5776654 7999999999999987777899999999999
Q ss_pred cccccCC--CCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCC
Q 006178 149 LQSNGLT--GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYN 221 (658)
Q Consensus 149 Ls~N~l~--g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N 221 (658)
|++|.++ +..|..+.++++|++|++++|+++ .+|.... ..+..+++++|.+++ +..+++|+.|++++|
T Consensus 152 l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~----~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 226 (330)
T 1xku_A 152 LGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP----PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFN 226 (330)
T ss_dssp CCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC----TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSS
T ss_pred CCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc----ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCC
Confidence 9999996 377888999999999999999998 4665432 467777888887754 456788888888888
Q ss_pred cCcccCcccCC---CCCCCccCCCccCC
Q 006178 222 FFVGSIPKCLE---YLPSTSFQGNCLQN 246 (658)
Q Consensus 222 ~l~g~ip~~l~---~l~~~~~~~n~~~~ 246 (658)
.+++..|..+. +|..+++++|.+..
T Consensus 227 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 254 (330)
T 1xku_A 227 SISAVDNGSLANTPHLRELHLNNNKLVK 254 (330)
T ss_dssp CCCEECTTTGGGSTTCCEEECCSSCCSS
T ss_pred cCceeChhhccCCCCCCEEECCCCcCcc
Confidence 88877665554 45566778886664
No 327
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.66 E-value=4.1e-17 Score=167.06 Aligned_cols=176 Identities=16% Similarity=0.099 Sum_probs=103.2
Q ss_pred CEEEEEecCCCCcccCCc---cccCCCCCcEEeccCCcccccCCccc--CCCCCCCEEEccCCcCCCCCc----ccccCC
Q 006178 71 RVLKINISGSSLKGFLAP---ELGLLTYLQELILHGNNLIGIIPKEL--GLLKRLKILDLGTNQLTGPIP----PEIGNL 141 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~---~~~~l~~L~~L~L~~N~l~g~~p~~~--~~l~~L~~L~Ls~N~l~g~~p----~~~~~l 141 (658)
+++.+.+.++.++...-. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 455666666655421100 11234557777777777776666666 667777777777777765544 334456
Q ss_pred cccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCccc--CCCCCCCCccccccccccCCCCcccc--------cCCC
Q 006178 142 TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGA--VPAGSNSGYTANIHGMYASSANLTGL--------CHLS 211 (658)
Q Consensus 142 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~--~p~~~~~~~~~~l~~~~l~~n~l~~~--------~~l~ 211 (658)
++|++|+|++|++++..|..|+++++|++|+|++|++.+. ++.........++..+++++|.++.+ ..++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~ 224 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGV 224 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTC
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCC
Confidence 6777777777777666666667777777777777766542 22222111224566666677666532 2456
Q ss_pred CCcEEEccCCcCcccCcccCC------CCCCCccCCCccCC
Q 006178 212 QLKVADFSYNFFVGSIPKCLE------YLPSTSFQGNCLQN 246 (658)
Q Consensus 212 ~L~~l~ls~N~l~g~ip~~l~------~l~~~~~~~n~~~~ 246 (658)
+|++|||++|.+++.+|..+. +|..+++++|.+..
T Consensus 225 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~ 265 (310)
T 4glp_A 225 QPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQ 265 (310)
T ss_dssp CCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCS
T ss_pred CCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCc
Confidence 677777777777666554432 44456666666653
No 328
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=1.6e-16 Score=147.02 Aligned_cols=139 Identities=22% Similarity=0.175 Sum_probs=116.1
Q ss_pred CCEEEEEecCCCCc-ccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 70 DRVLKINISGSSLK-GFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 70 ~~v~~l~L~~n~l~-g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
.+++.|+|++|.++ +.+|..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 56889999999998 78898899999999999999999875 7789999999999999999987888888899999999
Q ss_pred cccccCCCCC-hhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccC
Q 006178 149 LQSNGLTGRL-PAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSI 227 (658)
Q Consensus 149 Ls~N~l~g~~-p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~i 227 (658)
|++|.+++.. +..+..+++|++|++++|.+++..+-. ...+..+++|+.|++++|.+. .+
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~------------------~~~~~~l~~L~~L~l~~n~~~-~~ 162 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYR------------------ESVFKLLPQLTYLDGYDREDQ-EA 162 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHH------------------HHHHTTCSSCCEETTEETTSC-BC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHH------------------HHHHHhCccCcEecCCCCChh-hc
Confidence 9999998632 278999999999999999998443200 012556788999999999876 45
Q ss_pred cc
Q 006178 228 PK 229 (658)
Q Consensus 228 p~ 229 (658)
|.
T Consensus 163 ~~ 164 (168)
T 2ell_A 163 PD 164 (168)
T ss_dssp CS
T ss_pred cc
Confidence 53
No 329
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.66 E-value=9.9e-17 Score=164.78 Aligned_cols=165 Identities=19% Similarity=0.138 Sum_probs=91.4
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|+|++|.+++..+ +..+++|++|+|++|++++..+ +++|++|++++|++++..+ ..+++|+.|+|
T Consensus 58 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~-----~~~L~~L~l~~n~l~~~~~---~~~~~L~~L~l 127 (317)
T 3o53_A 58 TKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAANNNISRVSC---SRGQGKKNIYL 127 (317)
T ss_dssp TTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEE-----CTTCCEEECCSSCCSEEEE---CCCSSCEEEEC
T ss_pred CcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccC-----CCCcCEEECCCCccCCcCc---cccCCCCEEEC
Confidence 456777777777766543 6777777777777777664321 2444455555444443222 12455666666
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccc---cCCCCCcEEEccCCcCccc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL---CHLSQLKVADFSYNFFVGS 226 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~---~~l~~L~~l~ls~N~l~g~ 226 (658)
++|++++..|..++.+++|++|+|++|++++..|..... ....+..+++++|.++++ ..+++|+.|++++|.+++.
T Consensus 128 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~~l 206 (317)
T 3o53_A 128 ANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAA-SSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFM 206 (317)
T ss_dssp CSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGG-GTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCEE
T ss_pred CCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhh-ccCcCCEEECCCCcCcccccccccccCCEEECCCCcCCcc
Confidence 666666555556666666666666666666544432111 123455566666665432 2355666666666666643
Q ss_pred CcccC---CCCCCCccCCCccCC
Q 006178 227 IPKCL---EYLPSTSFQGNCLQN 246 (658)
Q Consensus 227 ip~~l---~~l~~~~~~~n~~~~ 246 (658)
.| .+ .+|..+++++|.+..
T Consensus 207 ~~-~~~~l~~L~~L~L~~N~l~~ 228 (317)
T 3o53_A 207 GP-EFQSAAGVTWISLRNNKLVL 228 (317)
T ss_dssp CG-GGGGGTTCSEEECTTSCCCE
T ss_pred hh-hhcccCcccEEECcCCcccc
Confidence 22 23 334445566665543
No 330
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.65 E-value=6.2e-16 Score=158.01 Aligned_cols=165 Identities=21% Similarity=0.356 Sum_probs=111.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|+|++|.+++..+ +..+++|++|+|++|.+++ +| .+..+++|++|+|++|++++ +|. +..+++|+.|+|
T Consensus 63 ~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 467778888887776433 7778888888888888775 33 57778888888888888774 443 777888888888
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCccc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGS 226 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g~ 226 (658)
++|.+++ +|. +..+++|++|+|++|++++..+ .....++..+++++|.+++ +..+++|+.|++++|.+++.
T Consensus 137 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~----l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~ 210 (308)
T 1h6u_A 137 DLNQITN-ISP-LAGLTNLQYLSIGNAQVSDLTP----LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDV 210 (308)
T ss_dssp CSSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG----GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCCBC
T ss_pred CCCccCc-Ccc-ccCCCCccEEEccCCcCCCChh----hcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccCcc
Confidence 8888875 333 7777888888888887775332 1122456667777777665 34567778888888877755
Q ss_pred Cc-ccCCCCCCCccCCCccCC
Q 006178 227 IP-KCLEYLPSTSFQGNCLQN 246 (658)
Q Consensus 227 ip-~~l~~l~~~~~~~n~~~~ 246 (658)
.| ..+.+|..+++++|.+..
T Consensus 211 ~~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 211 SPLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp GGGTTCTTCCEEEEEEEEEEC
T ss_pred ccccCCCCCCEEEccCCeeec
Confidence 43 112334445666776554
No 331
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.64 E-value=4e-16 Score=173.79 Aligned_cols=177 Identities=19% Similarity=0.123 Sum_probs=125.9
Q ss_pred CCEEEEEecCCCCcccC--CccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCc-ccccCCcccce
Q 006178 70 DRVLKINISGSSLKGFL--APELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP-PEIGNLTGLVK 146 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~--~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~ 146 (658)
.+++.|+|++|.+++.. |..+..+++|++|+|++|.+.+..+. +..+++|+.|++++|.+++..| ..+.++++|++
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred CCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 45677777777776543 56677778888888888877764443 7778888888888888876655 45777888888
Q ss_pred eecccccCCCCChhhhcCCCCCCEEeCCCCCCc-ccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccC
Q 006178 147 INLQSNGLTGRLPAELGNLISLEELHLDRNRLQ-GAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSY 220 (658)
Q Consensus 147 L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~-g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~ 220 (658)
|+|++|.+++..|..+.++++|++|+|++|+++ +.+|.... ...++..+++++|.+++ +..+++|+.|++++
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 503 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFT--ELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCT--TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhh--cccCCCEEECCCCccccCChhhhhcccCCCEEeCCC
Confidence 888888888777777888888888888888876 56664322 23466777777777654 34567788888888
Q ss_pred CcCcccCcccCCCC---CCCccCCCccCCCCc
Q 006178 221 NFFVGSIPKCLEYL---PSTSFQGNCLQNKDP 249 (658)
Q Consensus 221 N~l~g~ip~~l~~l---~~~~~~~n~~~~~~~ 249 (658)
|++++..|..+..+ ..+++++|.+.+.++
T Consensus 504 n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 504 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 88887766665544 445677777666544
No 332
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.64 E-value=3.5e-16 Score=174.27 Aligned_cols=162 Identities=20% Similarity=0.168 Sum_probs=128.2
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..+++.|+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 27 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred cccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 35789999999999998888999999999999999999998888999999999999999999987788999999999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcc-cCCCCCCCCccccccccccCCCCcccc-----cCCCCC----cEEEc
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQG-AVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQL----KVADF 218 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g-~~p~~~~~~~~~~l~~~~l~~n~l~~~-----~~l~~L----~~l~l 218 (658)
|++|++++..+..++++++|++|+|++|.+++ .+|.... ...+++.+++++|.++++ ..+.+| ..|++
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l 184 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFS--NLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDL 184 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGG--GCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEEC
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhc--ccCCCCEEeCcCCccceecHHHccchhccchhhhhccc
Confidence 99999997555579999999999999999986 4564321 123455556666655432 233344 56666
Q ss_pred cCCcCcccCcccCC
Q 006178 219 SYNFFVGSIPKCLE 232 (658)
Q Consensus 219 s~N~l~g~ip~~l~ 232 (658)
++|.+++..|..+.
T Consensus 185 ~~n~l~~~~~~~~~ 198 (570)
T 2z63_A 185 SLNPMNFIQPGAFK 198 (570)
T ss_dssp TTCCCCEECTTTTT
T ss_pred CCCCceecCHHHhc
Confidence 66666655554443
No 333
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.64 E-value=8.5e-16 Score=158.90 Aligned_cols=168 Identities=19% Similarity=0.250 Sum_probs=131.5
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..+++.|+|++|.+++..|..|+.+++|++|+|++|.++ .+|..+. ++|++|+|++|++++..+..+..+++|+.|+
T Consensus 77 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 153 (332)
T 2ft3_A 77 LQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIE 153 (332)
T ss_dssp CTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEE
T ss_pred CCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEE
Confidence 357899999999999988999999999999999999998 5776655 7999999999999976666799999999999
Q ss_pred cccccCC--CCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCC
Q 006178 149 LQSNGLT--GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYN 221 (658)
Q Consensus 149 Ls~N~l~--g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N 221 (658)
+++|.++ +..|..+..+ +|++|++++|++++ +|.... ..+..+++++|.+++ +..+++|+.|++++|
T Consensus 154 l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~----~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N 227 (332)
T 2ft3_A 154 MGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP----ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHN 227 (332)
T ss_dssp CCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC----SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSS
T ss_pred CCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc----CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCC
Confidence 9999996 4778888888 89999999999884 565322 356666777776653 445667777777777
Q ss_pred cCcccCcccCC---CCCCCccCCCccC
Q 006178 222 FFVGSIPKCLE---YLPSTSFQGNCLQ 245 (658)
Q Consensus 222 ~l~g~ip~~l~---~l~~~~~~~n~~~ 245 (658)
.+++..|..+. +|..+++++|.+.
T Consensus 228 ~l~~~~~~~~~~l~~L~~L~L~~N~l~ 254 (332)
T 2ft3_A 228 QIRMIENGSLSFLPTLRELHLDNNKLS 254 (332)
T ss_dssp CCCCCCTTGGGGCTTCCEEECCSSCCC
T ss_pred cCCcCChhHhhCCCCCCEEECCCCcCe
Confidence 77766554443 3444566666555
No 334
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=1.9e-16 Score=143.29 Aligned_cols=131 Identities=22% Similarity=0.170 Sum_probs=112.1
Q ss_pred CCEEEEEecCCCCc-ccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 70 DRVLKINISGSSLK-GFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 70 ~~v~~l~L~~n~l~-g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
.+++.|++++|.++ +.+|..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 46889999999998 88999999999999999999999976 7799999999999999999987999888899999999
Q ss_pred cccccCCCC-ChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccC
Q 006178 149 LQSNGLTGR-LPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSY 220 (658)
Q Consensus 149 Ls~N~l~g~-~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~ 220 (658)
|++|.+++. .|..+..+++|++|++++|.+++..+-. ...+..+++|+.||+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~------------------~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYR------------------ENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHH------------------HHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHH------------------HHHHHHCCCcccccCCC
Confidence 999999963 4488999999999999999998543300 01245577888888763
No 335
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=2e-15 Score=140.84 Aligned_cols=132 Identities=26% Similarity=0.289 Sum_probs=113.0
Q ss_pred EEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccc
Q 006178 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (658)
Q Consensus 73 ~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 152 (658)
+.+++++++++. +|..+ .++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|++|
T Consensus 10 ~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 578999999986 45433 479999999999999877778899999999999999999766667899999999999999
Q ss_pred cCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCc
Q 006178 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (658)
Q Consensus 153 ~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip 228 (658)
++++..+..+.++++|++|+|++|++++ +|.. .+..+++|+.|++++|.+++..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~--------------------~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKS-VPDG--------------------IFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSC-CCTT--------------------TTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceE-eCHH--------------------HhcCCcccCEEEecCCCeeccCc
Confidence 9998777778999999999999999984 4432 23457889999999999998765
No 336
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.63 E-value=8.2e-16 Score=172.11 Aligned_cols=173 Identities=18% Similarity=0.126 Sum_probs=154.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 46889999999999988889999999999999999999988888999999999999999999555555799999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCcc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPK 229 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip~ 229 (658)
++|.+++..|..|+++++|++|+|++|.+++. +. .....+..++++.|.++++....+|+.|++++|.++...+.
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~----~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~ 229 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-DL----SLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGP 229 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC-CG----GGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECS
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCc-Ch----hhhhhhhhhhcccCccccccCCchhheeeccCCcccccccc
Confidence 99999998888999999999999999999864 32 12356778899999999999999999999999999977667
Q ss_pred cCCCCCCCccCCCccCCC
Q 006178 230 CLEYLPSTSFQGNCLQNK 247 (658)
Q Consensus 230 ~l~~l~~~~~~~n~~~~~ 247 (658)
...+|..+.+++|.+.+.
T Consensus 230 ~~~~L~~L~L~~n~l~~~ 247 (597)
T 3oja_B 230 VNVELTILKLQHNNLTDT 247 (597)
T ss_dssp CCSCCCEEECCSSCCCCC
T ss_pred cCCCCCEEECCCCCCCCC
Confidence 778899999999988874
No 337
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=2.3e-15 Score=142.53 Aligned_cols=127 Identities=30% Similarity=0.393 Sum_probs=109.5
Q ss_pred EEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeeccccc
Q 006178 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNG 153 (658)
Q Consensus 74 ~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 153 (658)
.+++++|+++. +|..+. ++|++|+|++|+++ .+|..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+
T Consensus 14 ~l~~~~~~l~~-ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLKV-LPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCCc-CCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 46777888874 566543 68999999999998 688999999999999999999998878889999999999999999
Q ss_pred CCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcc
Q 006178 154 LTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 154 l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g 225 (658)
+++..|..|.++++|++|+|++|++++ +|.. .+..+++|+.|++++|.+.+
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~-~~~~--------------------~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISV-VPEG--------------------AFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCB-CCTT--------------------TTTTCTTCCEEECCSSCEEC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCe-eChh--------------------hhhcCccccEEEeCCCCeec
Confidence 998888899999999999999999984 4432 24567889999999999874
No 338
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.63 E-value=2.3e-15 Score=153.79 Aligned_cols=166 Identities=23% Similarity=0.344 Sum_probs=137.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|++++|.++. ++ .+..+++|++|+|++|.+.+..+ +..+++|++|+|++|.+++ +| .+..+++|+.|+|
T Consensus 41 ~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l 114 (308)
T 1h6u_A 41 DGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDL 114 (308)
T ss_dssp HTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEEC
T ss_pred CCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEEC
Confidence 478999999999987 44 68999999999999999996544 9999999999999999985 44 7999999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCccc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGS 226 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g~ 226 (658)
++|++++ +|. +..+++|++|+|++|++++..+ .....++..+++++|.+++ +..+++|+.|++++|.+++.
T Consensus 115 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~----l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~ 188 (308)
T 1h6u_A 115 TSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP----LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDI 188 (308)
T ss_dssp TTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG----GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc----ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcC
Confidence 9999996 554 9999999999999999986543 1223577888999998875 55788999999999999865
Q ss_pred Cc-ccCCCCCCCccCCCccCCC
Q 006178 227 IP-KCLEYLPSTSFQGNCLQNK 247 (658)
Q Consensus 227 ip-~~l~~l~~~~~~~n~~~~~ 247 (658)
.| ..+.+|..+++++|.+.+.
T Consensus 189 ~~l~~l~~L~~L~L~~N~l~~~ 210 (308)
T 1h6u_A 189 SPLASLPNLIEVHLKNNQISDV 210 (308)
T ss_dssp GGGGGCTTCCEEECTTSCCCBC
T ss_pred hhhcCCCCCCEEEccCCccCcc
Confidence 44 2345667788899977764
No 339
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.63 E-value=3.3e-16 Score=173.72 Aligned_cols=175 Identities=19% Similarity=0.196 Sum_probs=144.5
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCC-CCcccccCCccccee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTG-PIPPEIGNLTGLVKI 147 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L 147 (658)
..+++.|+|++|.+++..|..|+.+++|++|+|++|++++..|..|+++++|++|+|++|.+++ .+|..++++++|+.|
T Consensus 49 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 3579999999999999888999999999999999999998888789999999999999999986 467889999999999
Q ss_pred ecccccCCCCCh-hhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccc-----cCCCCCcEEEccCC
Q 006178 148 NLQSNGLTGRLP-AELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGL-----CHLSQLKVADFSYN 221 (658)
Q Consensus 148 ~Ls~N~l~g~~p-~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~-----~~l~~L~~l~ls~N 221 (658)
+|++|.+.+.+| ..|.++++|++|++++|++++.+|..... ..++..++++.|.+..+ ..+++|+.|++++|
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~--l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n 206 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKS--IRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDT 206 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT--CSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESC
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhc--cccCceEecccCcccccchhhHhhcccccEEEccCC
Confidence 999999655665 68999999999999999999988875432 34667777777776542 35788999999999
Q ss_pred cCcccC------cccCCCCCCCccCCCccC
Q 006178 222 FFVGSI------PKCLEYLPSTSFQGNCLQ 245 (658)
Q Consensus 222 ~l~g~i------p~~l~~l~~~~~~~n~~~ 245 (658)
++++.. .....++..+.+.+|.+.
T Consensus 207 ~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 236 (549)
T 2z81_A 207 NLARFQFSPLPVDEVSSPMKKLAFRGSVLT 236 (549)
T ss_dssp BCTTCCCCCCSSCCCCCCCCEEEEESCEEE
T ss_pred ccccccccccchhhhhhcccceeccccccc
Confidence 998742 223455666777776554
No 340
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.62 E-value=7.5e-16 Score=169.63 Aligned_cols=155 Identities=23% Similarity=0.253 Sum_probs=136.3
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccc--cCCcccCCCCCCCEEEccCCcCCCCCccc-ccCCcccc
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIG--IIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLV 145 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~ 145 (658)
...++.|+|++|.+++.+|..++.+++|++|+|++|++++ .+|..+..+++|++|+|++|++++.+|.. +..+++|+
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 4578999999999999999999999999999999999997 57788999999999999999999867765 88899999
Q ss_pred eeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccC
Q 006178 146 KINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSY 220 (658)
Q Consensus 146 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~ 220 (658)
.|+|++|++++.+|..+. ++|+.|+|++|+++ .+|.... ....+..+++++|.++. +..+++|+.|++++
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~--~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~ 477 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVV--KLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHT 477 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGG--GCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhh--cCCCCCEEECCCCcCCccCHHHhccCCcccEEECcC
Confidence 999999999988887765 79999999999999 7886433 24577888999998875 45678999999999
Q ss_pred CcCcccCc
Q 006178 221 NFFVGSIP 228 (658)
Q Consensus 221 N~l~g~ip 228 (658)
|.+++..+
T Consensus 478 N~~~c~c~ 485 (520)
T 2z7x_B 478 NPWDCSCP 485 (520)
T ss_dssp SCBCCCHH
T ss_pred CCCcccCC
Confidence 99987654
No 341
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.62 E-value=2.2e-15 Score=157.61 Aligned_cols=151 Identities=23% Similarity=0.130 Sum_probs=127.9
Q ss_pred EEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccC-CCCCCCEEEccCCcCCCCCcccccCCcccceeecccc
Q 006178 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELG-LLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (658)
Q Consensus 74 ~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 152 (658)
.+++++++|+. +|..+. ..++.|+|++|+|++..+..|. ++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 68999999987 666554 4689999999999998888887 9999999999999999777788999999999999999
Q ss_pred cCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCccc--
Q 006178 153 GLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKC-- 230 (658)
Q Consensus 153 ~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip~~-- 230 (658)
+|++..+..|.++++|++|+|++|++++..|. .+..+++|+.|+|++|.|++..+..
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~---------------------~~~~l~~L~~L~L~~N~l~~l~~~~~~ 157 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRN---------------------AFEDMAQLQKLYLSQNQISRFPVELIK 157 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTT---------------------TTTTCTTCCEEECCSSCCCSCCGGGTC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHH---------------------HhCCcccCCEEECCCCcCCeeCHHHhc
Confidence 99987777899999999999999999865543 3556889999999999999643333
Q ss_pred ----CCCCCCCccCCCccCCCC
Q 006178 231 ----LEYLPSTSFQGNCLQNKD 248 (658)
Q Consensus 231 ----l~~l~~~~~~~n~~~~~~ 248 (658)
+.+|..+++++|.+....
T Consensus 158 ~~~~l~~L~~L~L~~N~l~~l~ 179 (361)
T 2xot_A 158 DGNKLPKLMLLDLSSNKLKKLP 179 (361)
T ss_dssp ----CTTCCEEECCSSCCCCCC
T ss_pred CcccCCcCCEEECCCCCCCccC
Confidence 345667889999887654
No 342
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.3e-15 Score=144.18 Aligned_cols=122 Identities=21% Similarity=0.295 Sum_probs=109.6
Q ss_pred CCccceeecC---------CCCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCC
Q 006178 58 CHWTGIACSD---------ARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN 128 (658)
Q Consensus 58 c~w~gv~C~~---------~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N 128 (658)
|.|..+.|+. ....++.|+|++|.++ .+|..|..+++|+.|+|++|.+++..|..|.++++|++|+|++|
T Consensus 10 C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 10 CLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 5677788863 1247899999999998 57889999999999999999999988889999999999999999
Q ss_pred cCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcc
Q 006178 129 QLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180 (658)
Q Consensus 129 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g 180 (658)
+|++..|..|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 9998888889999999999999999997666679999999999999999874
No 343
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.62 E-value=1.3e-15 Score=169.29 Aligned_cols=155 Identities=21% Similarity=0.230 Sum_probs=135.7
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccc--cCCcccCCCCCCCEEEccCCcCCCCCccc-ccCCcccc
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIG--IIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLV 145 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~ 145 (658)
..+++.|+|++|.+++.+|..++.+++|+.|+|++|++++ .+|..+..+++|++|+|++|++++.+|.. +..+++|+
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 4679999999999999999999999999999999999997 34577999999999999999999867764 88899999
Q ss_pred eeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccC
Q 006178 146 KINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSY 220 (658)
Q Consensus 146 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~ 220 (658)
.|+|++|++++.+|..+. ++|++|+|++|+++ .+|.... ....+..+++++|.++. +..+++|+.|++++
T Consensus 432 ~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~--~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~ 506 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVT--HLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHD 506 (562)
T ss_dssp EEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTT--SSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCS
T ss_pred EEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhc--CCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecC
Confidence 999999999988777655 79999999999998 7887554 24578889999999875 45678999999999
Q ss_pred CcCcccCc
Q 006178 221 NFFVGSIP 228 (658)
Q Consensus 221 N~l~g~ip 228 (658)
|.+++..|
T Consensus 507 N~~~c~c~ 514 (562)
T 3a79_B 507 NPWDCTCP 514 (562)
T ss_dssp CCBCCCHH
T ss_pred CCcCCCcc
Confidence 99998765
No 344
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.61 E-value=2e-15 Score=159.87 Aligned_cols=171 Identities=19% Similarity=0.164 Sum_probs=116.1
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCccc-ccCCcccceee
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPE-IGNLTGLVKIN 148 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L~ 148 (658)
.+++.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|+++ .+|.. +.++++|++|+
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEE
Confidence 35667777777777766667777777777777777777666666777777777777777777 34443 56777777777
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCc
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip 228 (658)
|++|.+++..|..|.++++|++|++++|++++. +. .....+..++++.|.++++....+|+.|++++|.++....
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~----~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~ 222 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-DL----SLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRG 222 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC-CG----GGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEEC
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCcc-cc----ccccccceeecccccccccCCCCcceEEECCCCeeeeccc
Confidence 777777766666677777777777777777643 21 1123556667777777777777777777777777775544
Q ss_pred ccCCCCCCCccCCCccCC
Q 006178 229 KCLEYLPSTSFQGNCLQN 246 (658)
Q Consensus 229 ~~l~~l~~~~~~~n~~~~ 246 (658)
....++..+.+++|.+..
T Consensus 223 ~~~~~L~~L~l~~n~l~~ 240 (390)
T 3o6n_A 223 PVNVELTILKLQHNNLTD 240 (390)
T ss_dssp CCCSSCCEEECCSSCCCC
T ss_pred cccccccEEECCCCCCcc
Confidence 445566667777776554
No 345
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.61 E-value=5e-16 Score=167.42 Aligned_cols=164 Identities=23% Similarity=0.161 Sum_probs=68.2
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCC--------------------------------
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLK-------------------------------- 118 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~-------------------------------- 118 (658)
+++.|++++|.+ |.+|+++++|++|++|+|++|.+.|.+|.++++++
T Consensus 12 ~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~~~ 90 (454)
T 1jl5_A 12 FLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPELP 90 (454)
T ss_dssp -----------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCSCC
T ss_pred cchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCCCc
Confidence 455566666666 55666666666666666666666655665555443
Q ss_pred -CCCEEEccCCcCCCCCcccccC----------------C-cccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcc
Q 006178 119 -RLKILDLGTNQLTGPIPPEIGN----------------L-TGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180 (658)
Q Consensus 119 -~L~~L~Ls~N~l~g~~p~~~~~----------------l-~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g 180 (658)
+|++|++++|++++ +|..+.+ + ++|++|+|++|++++ +| .|+++++|++|++++|++++
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~ 167 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK 167 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCCCTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC
T ss_pred CCCCEEEccCCcCCc-cccccCCCcEEECCCCccCcccCCCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc
Confidence 34555555555543 3432211 1 244445555555543 44 35555555555555555543
Q ss_pred cCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCcccCcccCCCCCCCccCCCccC
Q 006178 181 AVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGSIPKCLEYLPSTSFQGNCLQ 245 (658)
Q Consensus 181 ~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g~ip~~l~~l~~~~~~~n~~~ 245 (658)
+|... .++..++++.|.+++ +.++++|+.|++++|.+++ +|....++..+++++|.+.
T Consensus 168 -lp~~~-----~~L~~L~L~~n~l~~l~~~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~n~l~ 228 (454)
T 1jl5_A 168 -LPDLP-----PSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKK-LPDLPLSLESIVAGNNILE 228 (454)
T ss_dssp -CCCCC-----TTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSS-CCCCCTTCCEEECCSSCCS
T ss_pred -cCCCc-----ccccEEECcCCcCCcCccccCCCCCCEEECCCCcCCc-CCCCcCcccEEECcCCcCC
Confidence 33321 234444455554433 2344555555555555553 4444444555555555443
No 346
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.61 E-value=3e-15 Score=164.47 Aligned_cols=155 Identities=28% Similarity=0.281 Sum_probs=126.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|+|++|.|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+|
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 57899999999998 466 568999999999999997 777 665 99999999999996 776 6899999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCC-CC-------cEEEccCC
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLS-QL-------KVADFSYN 221 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~-~L-------~~l~ls~N 221 (658)
++|.|++ +|. .+++|++|+|++|+|++ +|. .. .++..+++++|.++.+..+. +| +.|+|++|
T Consensus 148 s~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~----~~L~~L~Ls~N~L~~lp~~~~~L~~~~~~L~~L~Ls~N 217 (571)
T 3cvr_A 148 DNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP----ESLEALDVSTNLLESLPAVPVRNHHSEETEIFFRCREN 217 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC----TTCCEEECCSSCCSSCCCCC--------CCEEEECCSS
T ss_pred CCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh----CCCCEEECcCCCCCchhhHHHhhhcccccceEEecCCC
Confidence 9999996 776 67899999999999996 776 22 67888999999887654322 56 99999999
Q ss_pred cCcccCcccCCCCC---CCccCCCccCCC
Q 006178 222 FFVGSIPKCLEYLP---STSFQGNCLQNK 247 (658)
Q Consensus 222 ~l~g~ip~~l~~l~---~~~~~~n~~~~~ 247 (658)
+|+ .+|..+..++ .+++++|.+.+.
T Consensus 218 ~l~-~lp~~l~~l~~L~~L~L~~N~l~~~ 245 (571)
T 3cvr_A 218 RIT-HIPENILSLDPTCTIILEDNPLSSR 245 (571)
T ss_dssp CCC-CCCGGGGGSCTTEEEECCSSSCCHH
T ss_pred cce-ecCHHHhcCCCCCEEEeeCCcCCCc
Confidence 999 6887665554 567888977664
No 347
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.60 E-value=6.6e-16 Score=168.07 Aligned_cols=109 Identities=18% Similarity=0.172 Sum_probs=89.2
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCccccc-CCcccceee
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIG-NLTGLVKIN 148 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~ 148 (658)
..++.|+|++|.+++..+. .+++|+.|+|++|.+++..|..|+.+++|++|+|++|.+++.+|..+. .+++|+.|+
T Consensus 99 ~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~ 175 (487)
T 3oja_A 99 PSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (487)
T ss_dssp TTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEe
Confidence 4677888888888876543 467889999999999988888888899999999999999888888876 789999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCC
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p 183 (658)
|++|.|++. |. +..+++|+.|+|++|++++.+|
T Consensus 176 Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~ 208 (487)
T 3oja_A 176 LQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGP 208 (487)
T ss_dssp CTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECG
T ss_pred cCCCccccc-cc-cccCCCCCEEECCCCCCCCCCH
Confidence 999999865 33 4468899999999999986444
No 348
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.60 E-value=3.6e-15 Score=150.96 Aligned_cols=163 Identities=23% Similarity=0.328 Sum_probs=107.6
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
+++.|++++|.++.. +.+..+++|++|+|++|++++..| +..+++|++|+|++|.+++ +| .+..+++|+.|+|+
T Consensus 47 ~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~ 120 (291)
T 1h6t_A 47 SIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLE 120 (291)
T ss_dssp TCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECT
T ss_pred cccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECC
Confidence 567777777777654 347777777777777777776443 7777777777777777764 33 47777777777777
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCcccC
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGSI 227 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g~i 227 (658)
+|++++ + +.+..+++|++|++++|++++. +. .....++..+++++|.+++ +..+++|+.|++++|.+++ +
T Consensus 121 ~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~-~~---l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~-l 193 (291)
T 1h6t_A 121 HNGISD-I-NGLVHLPQLESLYLGNNKITDI-TV---LSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD-L 193 (291)
T ss_dssp TSCCCC-C-GGGGGCTTCCEEECCSSCCCCC-GG---GGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB-C
T ss_pred CCcCCC-C-hhhcCCCCCCEEEccCCcCCcc-hh---hccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCC-C
Confidence 777775 3 4577777777777777777643 21 1122456666777776654 4567788888888888874 4
Q ss_pred cc--cCCCCCCCccCCCccCC
Q 006178 228 PK--CLEYLPSTSFQGNCLQN 246 (658)
Q Consensus 228 p~--~l~~l~~~~~~~n~~~~ 246 (658)
|. .+.+|..+++++|.+..
T Consensus 194 ~~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 194 RALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp GGGTTCTTCSEEEEEEEEEEC
T ss_pred hhhccCCCCCEEECcCCcccC
Confidence 43 12334445667775544
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.60 E-value=2.2e-15 Score=156.91 Aligned_cols=189 Identities=13% Similarity=0.146 Sum_probs=141.3
Q ss_pred CCccceeecCC---------CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCc-ccCCCCCCCE-EEcc
Q 006178 58 CHWTGIACSDA---------RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPK-ELGLLKRLKI-LDLG 126 (658)
Q Consensus 58 c~w~gv~C~~~---------~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~-~~~~l~~L~~-L~Ls 126 (658)
|.|..|.|++. ...++.|+|++|+|+...+..|.+|++|++|+|++|++.+.+|. .|.++++|.. ++++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 68889999641 24688999999999986666899999999999999998776664 6888988775 6777
Q ss_pred CCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCC-CCcccCCCCCCCCccccccccccCCCCcc
Q 006178 127 TNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN-RLQGAVPAGSNSGYTANIHGMYASSANLT 205 (658)
Q Consensus 127 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N-~l~g~~p~~~~~~~~~~l~~~~l~~n~l~ 205 (658)
.|+++...|..|..+++|++|++++|++++..+..+....++..|++.++ ++. .+|..........+..++++.|.++
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~-~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH-TIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCC-EECTTSSTTSBSSCEEEECCSSCCC
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccc-cccccchhhcchhhhhhcccccccc
Confidence 89999777888999999999999999999766666777778888888664 454 5665544444445666778888776
Q ss_pred ccc----CCCCCcEEEccCCcCcccCccc-C---CCCCCCccCCCccCCC
Q 006178 206 GLC----HLSQLKVADFSYNFFVGSIPKC-L---EYLPSTSFQGNCLQNK 247 (658)
Q Consensus 206 ~~~----~l~~L~~l~ls~N~l~g~ip~~-l---~~l~~~~~~~n~~~~~ 247 (658)
.+. ...+|+.+++++|+..+.||.. + .+|..+++++|.++..
T Consensus 168 ~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~l 217 (350)
T 4ay9_X 168 EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSL 217 (350)
T ss_dssp EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCC
T ss_pred CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCcc
Confidence 532 3456788888765444466642 3 4456677888877664
No 350
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.59 E-value=3.2e-15 Score=142.10 Aligned_cols=130 Identities=18% Similarity=0.237 Sum_probs=111.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|++++|.++. ++.+..+++|++|+|++|.+++..|..+..+++|++|+|++|++++..|..++.+++|+.|+|
T Consensus 66 ~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L 143 (197)
T 4ezg_A 66 HNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143 (197)
T ss_dssp TTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEEC
T ss_pred CCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEc
Confidence 478999999997653 468999999999999999999888999999999999999999999888999999999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g 225 (658)
++|.+.+.+| .+..+++|++|++++|++++ ++ .+..+++|+.|++++|++.+
T Consensus 144 ~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~----------------------~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 144 SYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR----------------------GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT----------------------TGGGCSSCCEEEECBC----
T ss_pred cCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH----------------------HhccCCCCCEEEeeCcccCC
Confidence 9998444677 79999999999999999984 32 25567889999999998864
No 351
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.58 E-value=1.7e-15 Score=168.52 Aligned_cols=155 Identities=29% Similarity=0.348 Sum_probs=96.0
Q ss_pred CCCCCCCCCCCCCCcccee--------ecCCCCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCC
Q 006178 46 VLSNWNALDADPCHWTGIA--------CSDARDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLL 117 (658)
Q Consensus 46 ~l~~w~~~~~~~c~w~gv~--------C~~~~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l 117 (658)
.+..|.. +.+||.|.|.. |. ...++.|++++|+|+ .+|..+. ++|+.|+|++|+++ .+|. .+
T Consensus 11 ~w~~W~~-~~~~~~~~~r~~~~~~~~~c~--~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l 80 (622)
T 3g06_A 11 VWSAWRR-AAPAEESRGRAAVVQKMRACL--NNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LP 80 (622)
T ss_dssp HHHHHHH-TCCGGGHHHHHHHHHHHHHHH--HHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CC
T ss_pred HHHHHHh-cCCcchhccccccCccccccc--CCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cC
Confidence 3456754 45688887643 32 234777888888887 5666655 77888888888887 4555 46
Q ss_pred CCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCcccccccc
Q 006178 118 KRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGM 197 (658)
Q Consensus 118 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~ 197 (658)
++|++|+|++|+|+ .+|. .+++|++|+|++|.+++ +|. .+++|+.|++++|++++ +|... .++..+
T Consensus 81 ~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~l-----~~L~~L 146 (622)
T 3g06_A 81 PELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVLP-----PGLQEL 146 (622)
T ss_dssp TTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCCC-----TTCCEE
T ss_pred CCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCCC-----CCCCEE
Confidence 77888888888887 4665 56777788888877774 444 45667777777777663 44321 344555
Q ss_pred ccCCCCccccc-CCCCCcEEEccCCcCc
Q 006178 198 YASSANLTGLC-HLSQLKVADFSYNFFV 224 (658)
Q Consensus 198 ~l~~n~l~~~~-~l~~L~~l~ls~N~l~ 224 (658)
++++|.++++. .+.+|+.|++++|.++
T Consensus 147 ~Ls~N~l~~l~~~~~~L~~L~L~~N~l~ 174 (622)
T 3g06_A 147 SVSDNQLASLPALPSELCKLWAYNNQLT 174 (622)
T ss_dssp ECCSSCCSCCCCCCTTCCEEECCSSCCS
T ss_pred ECcCCcCCCcCCccCCCCEEECCCCCCC
Confidence 55555554432 1233344444444433
No 352
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.58 E-value=6.1e-15 Score=159.94 Aligned_cols=165 Identities=25% Similarity=0.390 Sum_probs=74.8
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCc---------------
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIP--------------- 135 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p--------------- 135 (658)
+++.|++++|.+++..| ++.+++|+.|+|++|.+++. ..+..+++|+.|++++|.+++..|
T Consensus 200 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n 275 (466)
T 1o6v_A 200 NLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGAN 275 (466)
T ss_dssp TCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSS
T ss_pred CCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchhhhcCCCCCEEECCCC
Confidence 45555555555555333 44455555555555554431 234444455555555555443222
Q ss_pred ------ccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---
Q 006178 136 ------PEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG--- 206 (658)
Q Consensus 136 ------~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~--- 206 (658)
. +..+++|+.|+|++|++++..| +..+++|+.|+|++|++++..|- .....+..+++++|.+++
T Consensus 276 ~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~----~~l~~L~~L~l~~n~l~~~~~ 348 (466)
T 1o6v_A 276 QISNISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPV----SSLTKLQRLFFYNNKVSDVSS 348 (466)
T ss_dssp CCCCCGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGG----GGCTTCCEEECCSSCCCCCGG
T ss_pred ccCcccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchhh----ccCccCCEeECCCCccCCchh
Confidence 2 4444444455554444443222 44445555555555554443331 112334444555554443
Q ss_pred ccCCCCCcEEEccCCcCcccCc-ccCCCCCCCccCCCccCC
Q 006178 207 LCHLSQLKVADFSYNFFVGSIP-KCLEYLPSTSFQGNCLQN 246 (658)
Q Consensus 207 ~~~l~~L~~l~ls~N~l~g~ip-~~l~~l~~~~~~~n~~~~ 246 (658)
+..+++|+.|++++|++++.+| ..+.++..+.+.+|.+.+
T Consensus 349 l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 349 LANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp GTTCTTCCEEECCSSCCCBCGGGTTCTTCCEEECCCEEEEC
T ss_pred hccCCCCCEEeCCCCccCccchhhcCCCCCEEeccCCcccC
Confidence 3344555555555555555544 112223334445554443
No 353
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.58 E-value=1.4e-14 Score=156.30 Aligned_cols=159 Identities=22% Similarity=0.257 Sum_probs=94.9
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
+++.|+|++|.+++. | .++.+++|++|+|++|++++. | ++.+++|++|+|++|++++ +| ++++++|++|+|+
T Consensus 43 ~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L~ 114 (457)
T 3bz5_A 43 TLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCD 114 (457)
T ss_dssp TCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEECC
T ss_pred CCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEECC
Confidence 566777777777763 3 567777777777777777653 3 6677777777777777765 33 6677777777777
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcc---cccCCCCCcEEEccCCcCcccC
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLT---GLCHLSQLKVADFSYNFFVGSI 227 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~---~~~~l~~L~~l~ls~N~l~g~i 227 (658)
+|++++ +| ++.+++|++|++++|++++ +|-. ....+..++++.|... .+..+++|+.|++++|++++ +
T Consensus 115 ~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~l~----~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~-l 185 (457)
T 3bz5_A 115 TNKLTK-LD--VSQNPLLTYLNCARNTLTE-IDVS----HNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITE-L 185 (457)
T ss_dssp SSCCSC-CC--CTTCTTCCEEECTTSCCSC-CCCT----TCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCC-C
T ss_pred CCcCCe-ec--CCCCCcCCEEECCCCccce-eccc----cCCcCCEEECCCCCcccccccccCCcCCEEECCCCccce-e
Confidence 777775 44 6677777777777777765 3311 1234455555555321 23445556666666666654 2
Q ss_pred c-ccCCCCCCCccCCCccCC
Q 006178 228 P-KCLEYLPSTSFQGNCLQN 246 (658)
Q Consensus 228 p-~~l~~l~~~~~~~n~~~~ 246 (658)
| ..+.++..+.+++|.+.+
T Consensus 186 ~l~~l~~L~~L~l~~N~l~~ 205 (457)
T 3bz5_A 186 DVSQNKLLNRLNCDTNNITK 205 (457)
T ss_dssp CCTTCTTCCEEECCSSCCSC
T ss_pred ccccCCCCCEEECcCCcCCe
Confidence 3 222333444555554444
No 354
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.58 E-value=1.7e-14 Score=155.47 Aligned_cols=140 Identities=19% Similarity=0.205 Sum_probs=92.0
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|+|++|.+++. | ++.+++|++|+|++|.+++. | ++.+++|++|+|++|++++ +| ++.+++|++|++
T Consensus 64 ~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l 134 (457)
T 3bz5_A 64 TGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNC 134 (457)
T ss_dssp TTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEEC
Confidence 4677888888888874 3 78888888888888888863 3 7788888888888888875 44 778888888888
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc--ccCCCCCcEEEccCCcCcc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG--LCHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~--~~~l~~L~~l~ls~N~l~g 225 (658)
++|++++ +| ++++++|++|++++|+..+.++-.. ...+..++++.|.+++ +..+++|+.|++++|.+++
T Consensus 135 ~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~~~~~----l~~L~~L~ls~n~l~~l~l~~l~~L~~L~l~~N~l~~ 205 (457)
T 3bz5_A 135 ARNTLTE-ID--VSHNTQLTELDCHLNKKITKLDVTP----QTQLTTLDCSFNKITELDVSQNKLLNRLNCDTNNITK 205 (457)
T ss_dssp TTSCCSC-CC--CTTCTTCCEEECTTCSCCCCCCCTT----CTTCCEEECCSSCCCCCCCTTCTTCCEEECCSSCCSC
T ss_pred CCCccce-ec--cccCCcCCEEECCCCCccccccccc----CCcCCEEECCCCccceeccccCCCCCEEECcCCcCCe
Confidence 8888876 33 6667777777777775555543211 1344444555554443 2233444444444444443
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.58 E-value=6.7e-15 Score=149.01 Aligned_cols=145 Identities=26% Similarity=0.364 Sum_probs=125.3
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|+|++|.+++..+ +..+++|++|+|++|.+++ +| .+..+++|++|+|++|++++ + +.+..+++|+.|+|
T Consensus 68 ~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEc
Confidence 579999999999998544 9999999999999999986 44 49999999999999999985 4 57899999999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCccc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGS 226 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g~ 226 (658)
++|++++. ..+..+++|++|+|++|++++..| .....++..+++++|.++. +..+++|+.|++++|.++..
T Consensus 142 ~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~----l~~l~~L~~L~L~~N~i~~l~~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP----LAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG----GTTCTTCCEEECCSSCCCBCGGGTTCTTCSEEEEEEEEEECC
T ss_pred cCCcCCcc--hhhccCCCCCEEEccCCccccchh----hcCCCccCEEECCCCcCCCChhhccCCCCCEEECcCCcccCC
Confidence 99999964 679999999999999999997655 1223578889999998875 56788999999999999853
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.57 E-value=1.3e-14 Score=161.23 Aligned_cols=145 Identities=26% Similarity=0.365 Sum_probs=111.1
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|+|++|.+++..+ +..+++|+.|+|++|.+.+ +| .+..|++|+.|+|++|++++ + +.+..|++|+.|+|
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 138 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEEC
Confidence 468888888888887544 8888888888888888875 34 68888888888888888885 3 45888888888888
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCccc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGS 226 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g~ 226 (658)
++|.+++. ..+..|++|+.|+|++|++++..|- ....+|..++++.|.+++ +..+++|+.|+|++|.+++.
T Consensus 139 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l----~~l~~L~~L~Ls~N~i~~l~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPL----AGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGG----TTCTTCCEEECCSSCCCBCGGGTTCTTCSEEECCSEEEECC
T ss_pred CCCccCCc--hhhcccCCCCEEECcCCcCCCchhh----ccCCCCCEEECcCCCCCCChHHccCCCCCEEEccCCcCcCC
Confidence 88888864 5788888888888888888876551 123466777777777654 45567788888888877754
No 357
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.57 E-value=5.5e-16 Score=176.58 Aligned_cols=112 Identities=29% Similarity=0.432 Sum_probs=105.8
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
...++.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|++|++|++|||++|.|+ .+|..|++|++|++|+
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 299 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFY 299 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEE
T ss_pred CCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEE
Confidence 457889999999998 68888999999999999999999 89999999999999999999999 8899999999999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCC
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPA 184 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~ 184 (658)
|++|.|+ .+|..|++|++|++|+|++|+|+|.+|.
T Consensus 300 L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~ 334 (727)
T 4b8c_D 300 FFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLK 334 (727)
T ss_dssp CCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHH
T ss_pred CCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChH
Confidence 9999998 7899999999999999999999988875
No 358
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.56 E-value=1.9e-14 Score=154.97 Aligned_cols=159 Identities=27% Similarity=0.323 Sum_probs=121.6
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
..++.|++++|.+++ +|. ..++|++|+|++|++++ +| +|+++++|++|++++|++++ +|..+ .+|++|++
T Consensus 111 ~~L~~L~l~~n~l~~-l~~---~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L 180 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKA-LSD---LPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAA 180 (454)
T ss_dssp TTCCEEECCSSCCSC-CCS---CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEEC
T ss_pred CCCcEEECCCCccCc-ccC---CCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEEC
Confidence 456666666666665 221 12689999999999986 77 58999999999999999985 67544 58999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCccc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGS 226 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g~ 226 (658)
++|++++ +| .++++++|++|++++|++++ +|... ..+..+++++|.++. +..+++|+.|++++|++++
T Consensus 181 ~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~-----~~L~~L~l~~n~l~~lp~~~~l~~L~~L~l~~N~l~~- 251 (454)
T 1jl5_A 181 GNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP-----LSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKT- 251 (454)
T ss_dssp CSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC-----TTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSS-
T ss_pred cCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc-----CcccEEECcCCcCCcccccCCCCCCCEEECCCCcCCc-
Confidence 9999996 67 68999999999999999985 55422 356677777777654 4567788888888888885
Q ss_pred CcccCCCCCCCccCCCccCCC
Q 006178 227 IPKCLEYLPSTSFQGNCLQNK 247 (658)
Q Consensus 227 ip~~l~~l~~~~~~~n~~~~~ 247 (658)
+|..+.++..+++++|.+.+.
T Consensus 252 l~~~~~~L~~L~l~~N~l~~l 272 (454)
T 1jl5_A 252 LPDLPPSLEALNVRDNYLTDL 272 (454)
T ss_dssp CCSCCTTCCEEECCSSCCSCC
T ss_pred ccccccccCEEECCCCccccc
Confidence 676677788888888877663
No 359
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.56 E-value=5e-15 Score=133.91 Aligned_cols=123 Identities=21% Similarity=0.230 Sum_probs=105.3
Q ss_pred CCCCCcEEeccCCccc-ccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCE
Q 006178 92 LLTYLQELILHGNNLI-GIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEE 170 (658)
Q Consensus 92 ~l~~L~~L~L~~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 170 (658)
..++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|.+++.+|..+..+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3478999999999998 88999999999999999999999965 78999999999999999999889999999999999
Q ss_pred EeCCCCCCccc-CCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCc---ccCCCCCCC
Q 006178 171 LHLDRNRLQGA-VPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP---KCLEYLPST 237 (658)
Q Consensus 171 L~L~~N~l~g~-~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip---~~l~~l~~~ 237 (658)
|++++|++++. .| ..+..+++|+.|++++|.+++..+ ..+..++.+
T Consensus 93 L~ls~N~i~~~~~~---------------------~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L 142 (149)
T 2je0_A 93 LNLSGNKIKDLSTI---------------------EPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQL 142 (149)
T ss_dssp EECTTSCCCSHHHH---------------------GGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTC
T ss_pred EECCCCcCCChHHH---------------------HHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCc
Confidence 99999999853 11 235678899999999999997665 345544443
No 360
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.55 E-value=1e-14 Score=134.84 Aligned_cols=131 Identities=22% Similarity=0.173 Sum_probs=109.3
Q ss_pred CCCCCcEEeccCCccc-ccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCE
Q 006178 92 LLTYLQELILHGNNLI-GIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEE 170 (658)
Q Consensus 92 ~l~~L~~L~L~~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 170 (658)
..++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+.++++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 4588999999999998 78999999999999999999999965 78999999999999999999889999999999999
Q ss_pred EeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCc---ccCCC---CCCCccCCCcc
Q 006178 171 LHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP---KCLEY---LPSTSFQGNCL 244 (658)
Q Consensus 171 L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip---~~l~~---l~~~~~~~n~~ 244 (658)
|+|++|++++. |. +..+..+++|+.|++++|.+++..+ ..+.. |..+++.+|.+
T Consensus 100 L~Ls~N~l~~~-~~-------------------~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 100 LNLSGNKLKDI-ST-------------------LEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp EECBSSSCCSS-GG-------------------GGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred EeccCCccCcc-hh-------------------HHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 99999999853 21 0235678899999999999996655 34444 44556666643
No 361
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.55 E-value=1.8e-14 Score=149.78 Aligned_cols=169 Identities=24% Similarity=0.289 Sum_probs=124.1
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
...++.|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|+
T Consensus 154 l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~ 227 (347)
T 4fmz_A 154 MTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLK 227 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEE
T ss_pred CCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEE
Confidence 3468888999888876543 8888889999999888875433 7788888888888888875433 77888888888
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCcc
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g 225 (658)
|++|.+++ +|. +..+++|++|++++|.+++ ++. .....++..+++++|.+++ +..+++|+.|++++|.+++
T Consensus 228 l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~~~---~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~ 301 (347)
T 4fmz_A 228 IGNNKITD-LSP-LANLSQLTWLEIGTNQISD-INA---VKDLTKLKMLNVGSNQISDISVLNNLSQLNSLFLNNNQLGN 301 (347)
T ss_dssp CCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG---GTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCG
T ss_pred ccCCccCC-Ccc-hhcCCCCCEEECCCCccCC-Chh---HhcCCCcCEEEccCCccCCChhhcCCCCCCEEECcCCcCCC
Confidence 88888885 444 8888888888888888875 332 1123466777788877765 4567788888888888887
Q ss_pred cCcccCC---CCCCCccCCCccCCCCc
Q 006178 226 SIPKCLE---YLPSTSFQGNCLQNKDP 249 (658)
Q Consensus 226 ~ip~~l~---~l~~~~~~~n~~~~~~~ 249 (658)
..|..+. +|..+++++|.+....|
T Consensus 302 ~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 302 EDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp GGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred cChhHhhccccCCEEEccCCccccccC
Confidence 7776554 44556778887766543
No 362
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.55 E-value=7.5e-15 Score=162.11 Aligned_cols=109 Identities=26% Similarity=0.268 Sum_probs=101.2
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
.++.|+|++|.|++ +|. ++.+++|+.|+|++|+|+ .+|..|+.|++|++|+|++|+|++ +| .++.+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 47789999999998 565 999999999999999999 789999999999999999999996 78 89999999999999
Q ss_pred cccCCCCC-hhhhcCCCCCCEEeCCCCCCcccCCC
Q 006178 151 SNGLTGRL-PAELGNLISLEELHLDRNRLQGAVPA 184 (658)
Q Consensus 151 ~N~l~g~~-p~~~~~l~~L~~L~L~~N~l~g~~p~ 184 (658)
+|+|++.. |..|++|++|+.|+|++|++++.+|.
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 99999876 99999999999999999999976653
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.55 E-value=1.3e-14 Score=161.07 Aligned_cols=166 Identities=23% Similarity=0.327 Sum_probs=136.2
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..+++.|+|++|.+... +.+..|++|+.|+|++|++.+..| +..|++|+.|+|++|.|++ +| .+..+++|+.|+
T Consensus 42 L~~L~~L~l~~n~i~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~ 115 (605)
T 1m9s_A 42 LNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLS 115 (605)
T ss_dssp HTTCCCCBCTTCCCCCC--TTGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEE
T ss_pred CCCCCEEECcCCCCCCC--hHHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEE
Confidence 34688899999999864 369999999999999999997655 8999999999999999985 44 799999999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCcc
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g 225 (658)
|++|.+++ + +.+..|++|+.|+|++|++++. +. .....+|..++++.|.+++ +..+++|+.|+|++|.|++
T Consensus 116 Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~---l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~ 189 (605)
T 1m9s_A 116 LEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TV---LSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD 189 (605)
T ss_dssp CTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GG---GGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB
T ss_pred ecCCCCCC-C-ccccCCCccCEEECCCCccCCc-hh---hcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCC
Confidence 99999996 4 4699999999999999999864 32 1223578888999998876 4678899999999999986
Q ss_pred cCcc--cCCCCCCCccCCCccCCC
Q 006178 226 SIPK--CLEYLPSTSFQGNCLQNK 247 (658)
Q Consensus 226 ~ip~--~l~~l~~~~~~~n~~~~~ 247 (658)
+|. .+.+|..|++++|.+...
T Consensus 190 -l~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 190 -LRALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp -CGGGTTCTTCSEEECCSEEEECC
T ss_pred -ChHHccCCCCCEEEccCCcCcCC
Confidence 442 234555677888876653
No 364
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.54 E-value=1.4e-14 Score=163.39 Aligned_cols=176 Identities=19% Similarity=0.212 Sum_probs=115.5
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCC-cccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP-KELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+..++++.+.+.+ ++..+..++.|+.++++.|++....+ ..+..+++|+.++++.|.+.+..|..+..+++|+.|+|
T Consensus 398 ~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~L 476 (635)
T 4g8a_A 398 SLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 476 (635)
T ss_dssp CCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEEC
T ss_pred hhhhhhcccccccc-ccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhh
Confidence 45666666666654 34456666667777766666554433 34566666666666666666666666666666666666
Q ss_pred ccccCC-CCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc-----ccCCCCCcEEEccCCcC
Q 006178 150 QSNGLT-GRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG-----LCHLSQLKVADFSYNFF 223 (658)
Q Consensus 150 s~N~l~-g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~-----~~~l~~L~~l~ls~N~l 223 (658)
++|.+. +.+|..|..+++|++|+|++|++++.+|..... ..+++.+++++|++++ +.++++|++|||++|+|
T Consensus 477 s~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~--l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l 554 (635)
T 4g8a_A 477 AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNS--LSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 554 (635)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTT--CTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCC
T ss_pred hhcccccccCchhhhhccccCEEECCCCccCCcChHHHcC--CCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcC
Confidence 666533 345556666666666666666666555543211 2355566666666654 45688999999999999
Q ss_pred cccCcccCCCC----CCCccCCCccCCCCc
Q 006178 224 VGSIPKCLEYL----PSTSFQGNCLQNKDP 249 (658)
Q Consensus 224 ~g~ip~~l~~l----~~~~~~~n~~~~~~~ 249 (658)
++..|..+..+ ..+++++|.+...|.
T Consensus 555 ~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 555 MTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 99999887654 457889998887653
No 365
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.54 E-value=2.7e-14 Score=132.19 Aligned_cols=107 Identities=30% Similarity=0.324 Sum_probs=94.8
Q ss_pred EEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeeccccc
Q 006178 74 KINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNG 153 (658)
Q Consensus 74 ~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 153 (658)
.|++++|.++. +|..+ .++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+
T Consensus 13 ~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 57778888876 66655 3899999999999999889999999999999999999997666678999999999999999
Q ss_pred CCCCChhhhcCCCCCCEEeCCCCCCcccCC
Q 006178 154 LTGRLPAELGNLISLEELHLDRNRLQGAVP 183 (658)
Q Consensus 154 l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p 183 (658)
|++..|..|.++++|++|+|++|.++...+
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 997777779999999999999999985543
No 366
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.54 E-value=5.1e-15 Score=151.95 Aligned_cols=158 Identities=18% Similarity=0.142 Sum_probs=115.5
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCccccc-CCcccceee
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIG-NLTGLVKIN 148 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~ 148 (658)
..++.|++++|.+++..+. .+++|++|+|++|++++..|..+..+++|++|+|++|.+++..|..+. .+++|++|+
T Consensus 99 ~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 175 (317)
T 3o53_A 99 PSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (317)
T ss_dssp TTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEE
Confidence 4678888888888876543 367899999999999988788888899999999999999877677664 789999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc----ccCCCCCcEEEccCCcCc
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG----LCHLSQLKVADFSYNFFV 224 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~----~~~l~~L~~l~ls~N~l~ 224 (658)
|++|.+++. |. ...+++|++|+|++|++++..+. . ....++..+++++|.++. +..+++|+.|++++|.++
T Consensus 176 L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~-~--~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~ 250 (317)
T 3o53_A 176 LQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPE-F--QSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFH 250 (317)
T ss_dssp CTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGG-G--GGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCB
T ss_pred CCCCcCccc-cc-ccccccCCEEECCCCcCCcchhh-h--cccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCcc
Confidence 999999854 43 34588999999999999854332 1 112455566666666553 334566777777777776
Q ss_pred -ccCcccCCCCC
Q 006178 225 -GSIPKCLEYLP 235 (658)
Q Consensus 225 -g~ip~~l~~l~ 235 (658)
+.+|..+..++
T Consensus 251 ~~~~~~~~~~~~ 262 (317)
T 3o53_A 251 CGTLRDFFSKNQ 262 (317)
T ss_dssp HHHHHHHHHTCH
T ss_pred CcCHHHHHhccc
Confidence 55555555443
No 367
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.53 E-value=2.7e-14 Score=142.22 Aligned_cols=142 Identities=25% Similarity=0.328 Sum_probs=101.8
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeec
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINL 149 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 149 (658)
.+++.|++++|.++. ++ .+..+++|++|+|++|++++..| +..+++|++|+|++|++++ +|... . ++|+.|+|
T Consensus 41 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEEC
T ss_pred CcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccc-c-CcccEEEc
Confidence 468889999999886 44 78899999999999999987544 8999999999999999985 55433 3 89999999
Q ss_pred ccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCc
Q 006178 150 QSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFV 224 (658)
Q Consensus 150 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~ 224 (658)
++|++++ +| .+..+++|+.|+|++|++++. |. .....++..+++++|.+++ +..+++|+.|++++|.++
T Consensus 114 ~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~~---l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 114 DNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-VM---LGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp CSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-GG---GGGCTTCCEEECTTSCCCBCTTSTTCCCCCEEEEEEEEEE
T ss_pred cCCccCC-Ch-hhcCcccccEEECCCCcCCCC-hH---HccCCCCCEEECCCCcCcchHHhccCCCCCEEeCCCCccc
Confidence 9999986 44 588999999999999999853 31 1111234444444444432 233444555555555544
No 368
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.52 E-value=4.3e-14 Score=153.25 Aligned_cols=167 Identities=26% Similarity=0.399 Sum_probs=136.9
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
...++.|++++|.+++. +.+..+++|++|++++|.+.+..| ++.+++|+.|++++|++++ + ..+..+++|+.|+
T Consensus 176 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~ 249 (466)
T 1o6v_A 176 LTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLD 249 (466)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEE
T ss_pred CCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-c-hhhhcCCCCCEEE
Confidence 35789999999999874 458999999999999999998665 7889999999999999985 4 4688999999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCcc
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g 225 (658)
+++|.+++..| +..+++|++|++++|++++..|- .....+..+++++|.+.+ +..+++|+.|++++|++++
T Consensus 250 l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~----~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~ 323 (466)
T 1o6v_A 250 LANNQISNLAP--LSGLTKLTELKLGANQISNISPL----AGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISD 323 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGG----TTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSC
T ss_pred CCCCccccchh--hhcCCCCCEEECCCCccCccccc----cCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCC
Confidence 99999997554 89999999999999999865441 123567778888888775 4567889999999999987
Q ss_pred cCc-ccCCCCCCCccCCCccCCC
Q 006178 226 SIP-KCLEYLPSTSFQGNCLQNK 247 (658)
Q Consensus 226 ~ip-~~l~~l~~~~~~~n~~~~~ 247 (658)
..| ..+.+|..+++.+|.+.+.
T Consensus 324 ~~~~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 324 ISPVSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CGGGGGCTTCCEEECCSSCCCCC
T ss_pred chhhccCccCCEeECCCCccCCc
Confidence 766 2345566678888877664
No 369
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.52 E-value=4.7e-16 Score=164.44 Aligned_cols=41 Identities=22% Similarity=0.040 Sum_probs=19.8
Q ss_pred cCCCCCcEEeccCCcccc----cCCcccCCCCCCCEEEccCCcCC
Q 006178 91 GLLTYLQELILHGNNLIG----IIPKELGLLKRLKILDLGTNQLT 131 (658)
Q Consensus 91 ~~l~~L~~L~L~~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~ 131 (658)
..+++|++|+|++|.+++ .+|..+..+++|++|+|++|.++
T Consensus 91 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 135 (386)
T 2ca6_A 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLG 135 (386)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCH
T ss_pred hhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCC
Confidence 344555555555555444 24444444455555555555443
No 370
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.52 E-value=5.3e-14 Score=130.66 Aligned_cols=106 Identities=25% Similarity=0.266 Sum_probs=93.9
Q ss_pred EEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccc
Q 006178 73 LKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSN 152 (658)
Q Consensus 73 ~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 152 (658)
+.+++++|.++. +|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 468999999954 777664 89999999999999988999999999999999999999755556789999999999999
Q ss_pred cCCCCChhhhcCCCCCCEEeCCCCCCccc
Q 006178 153 GLTGRLPAELGNLISLEELHLDRNRLQGA 181 (658)
Q Consensus 153 ~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ 181 (658)
+|++..+..|..+++|++|+|++|.+...
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 99976666699999999999999999743
No 371
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.51 E-value=5.2e-14 Score=146.31 Aligned_cols=168 Identities=23% Similarity=0.319 Sum_probs=132.4
Q ss_pred CCCEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 69 RDRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..+++.|++++|...+.++. +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+++ ++. +..+++|+.|+
T Consensus 131 l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~ 205 (347)
T 4fmz_A 131 LTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED-ISP-LASLTSLHYFT 205 (347)
T ss_dssp CTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC-CGG-GGGCTTCCEEE
T ss_pred CCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc-ccc-ccCCCccceee
Confidence 35788999999976665544 8999999999999999886544 8889999999999999984 444 88899999999
Q ss_pred cccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCcc
Q 006178 149 LQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 149 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g 225 (658)
+++|.+++..+ +..+++|++|++++|++++..+ .....++..+++++|.++. +..+++|+.|++++|.+++
T Consensus 206 l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~----~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~ 279 (347)
T 4fmz_A 206 AYVNQITDITP--VANMTRLNSLKIGNNKITDLSP----LANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISD 279 (347)
T ss_dssp CCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG----GTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC
T ss_pred cccCCCCCCch--hhcCCcCCEEEccCCccCCCcc----hhcCCCCCEEECCCCccCCChhHhcCCCcCEEEccCCccCC
Confidence 99999986444 8899999999999999985443 1223567788888888765 5578899999999999986
Q ss_pred cCcc--cCCCCCCCccCCCccCCCC
Q 006178 226 SIPK--CLEYLPSTSFQGNCLQNKD 248 (658)
Q Consensus 226 ~ip~--~l~~l~~~~~~~n~~~~~~ 248 (658)
. |. .+.++..+++++|.+....
T Consensus 280 ~-~~~~~l~~L~~L~L~~n~l~~~~ 303 (347)
T 4fmz_A 280 I-SVLNNLSQLNSLFLNNNQLGNED 303 (347)
T ss_dssp C-GGGGGCTTCSEEECCSSCCCGGG
T ss_pred C-hhhcCCCCCCEEECcCCcCCCcC
Confidence 4 42 3456677888888776543
No 372
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.50 E-value=1.9e-14 Score=134.06 Aligned_cols=132 Identities=23% Similarity=0.252 Sum_probs=107.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCC-CCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLT-YLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..++.|+|++|.++. +| .+..+. +|++|+|++|.+++. ..|..+++|++|+|++|++++..|..+..+++|++|+
T Consensus 19 ~~L~~L~l~~n~l~~-i~-~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IE-NLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCCS-CC-CGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCch-hH-HhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 368999999999996 44 455555 999999999999975 5799999999999999999954444458999999999
Q ss_pred cccccCCCCChh--hhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCc
Q 006178 149 LQSNGLTGRLPA--ELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFV 224 (658)
Q Consensus 149 Ls~N~l~g~~p~--~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~ 224 (658)
|++|.++ .+|. .+..+++|+.|++++|.++ .+|... ...+..+++|+.||++.|...
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~-----------------~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYR-----------------LYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHH-----------------HHHHHHCTTCSEETTEECCHH
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHH-----------------HHHHHHCCccceeCCCcCCHH
Confidence 9999996 6776 8999999999999999997 444310 001456788999999999764
No 373
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.48 E-value=1.7e-15 Score=160.17 Aligned_cols=177 Identities=22% Similarity=0.272 Sum_probs=137.9
Q ss_pred CCEEEEEecCCCCcccC----CccccCCCCCcEEeccCC---cccccCCccc-------CCCCCCCEEEccCCcCCC---
Q 006178 70 DRVLKINISGSSLKGFL----APELGLLTYLQELILHGN---NLIGIIPKEL-------GLLKRLKILDLGTNQLTG--- 132 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~----~~~~~~l~~L~~L~L~~N---~l~g~~p~~~-------~~l~~L~~L~Ls~N~l~g--- 132 (658)
.+++.|+|++|.+++.. +..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|++|.+++
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 46899999999998763 345778999999999995 5666777655 789999999999999997
Q ss_pred -CCcccccCCcccceeecccccCCCCChhhhc----CC---------CCCCEEeCCCCCCc-ccCCCCC-CCCccccccc
Q 006178 133 -PIPPEIGNLTGLVKINLQSNGLTGRLPAELG----NL---------ISLEELHLDRNRLQ-GAVPAGS-NSGYTANIHG 196 (658)
Q Consensus 133 -~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~----~l---------~~L~~L~L~~N~l~-g~~p~~~-~~~~~~~l~~ 196 (658)
.+|..+..+++|++|+|++|.+++..+..+. .+ ++|++|+|++|+++ +.+|... ......++..
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~ 191 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 191 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCE
Confidence 4788899999999999999999754444444 44 89999999999997 4444200 0001236778
Q ss_pred cccCCCCcc----------cccCCCCCcEEEccCCcCc----ccCcccCC---CCCCCccCCCccCC
Q 006178 197 MYASSANLT----------GLCHLSQLKVADFSYNFFV----GSIPKCLE---YLPSTSFQGNCLQN 246 (658)
Q Consensus 197 ~~l~~n~l~----------~~~~l~~L~~l~ls~N~l~----g~ip~~l~---~l~~~~~~~n~~~~ 246 (658)
+++++|.++ .+..+++|+.|+|++|.++ +.+|..+. +|..+++++|.+..
T Consensus 192 L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~ 258 (386)
T 2ca6_A 192 VKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSA 258 (386)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCH
T ss_pred EECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCch
Confidence 899999887 5668899999999999996 67776654 55667888886654
No 374
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.48 E-value=3.5e-15 Score=156.24 Aligned_cols=176 Identities=19% Similarity=0.206 Sum_probs=100.7
Q ss_pred CEEEEEecCCCCcccCC----ccccCCC-CCcEEeccCCcccccCCcccCCC-----CCCCEEEccCCcCCCCCcccccC
Q 006178 71 RVLKINISGSSLKGFLA----PELGLLT-YLQELILHGNNLIGIIPKELGLL-----KRLKILDLGTNQLTGPIPPEIGN 140 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~----~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~~ 140 (658)
.++.|+|++|.+++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++|++|+|++|.+++..+..+..
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 46777777777766554 4556666 67777777777766655555553 67777777777776555554333
Q ss_pred ----C-cccceeecccccCCCCChhhhcC-----CCCCCEEeCCCCCCcccCCCCCC---CCccccccccccCCCCcccc
Q 006178 141 ----L-TGLVKINLQSNGLTGRLPAELGN-----LISLEELHLDRNRLQGAVPAGSN---SGYTANIHGMYASSANLTGL 207 (658)
Q Consensus 141 ----l-~~L~~L~Ls~N~l~g~~p~~~~~-----l~~L~~L~L~~N~l~g~~p~~~~---~~~~~~l~~~~l~~n~l~~~ 207 (658)
+ ++|+.|+|++|.+++..+..+.. .++|++|+|++|++++..+.... ......+..+++++|.+++.
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~ 182 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASK 182 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGS
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchh
Confidence 3 66777777777776655544432 25777777777776632211000 00112455566666666432
Q ss_pred ---------cCC-CCCcEEEccCCcCccc----CcccC----CCCCCCccCCCccCC
Q 006178 208 ---------CHL-SQLKVADFSYNFFVGS----IPKCL----EYLPSTSFQGNCLQN 246 (658)
Q Consensus 208 ---------~~l-~~L~~l~ls~N~l~g~----ip~~l----~~l~~~~~~~n~~~~ 246 (658)
... ++|+.|||++|.++.. +|..+ .+|..+++++|.+..
T Consensus 183 ~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 239 (362)
T 3goz_A 183 NCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHG 239 (362)
T ss_dssp CHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCC
T ss_pred hHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCc
Confidence 123 4666677776666642 33322 245556666665444
No 375
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.48 E-value=1.7e-15 Score=156.87 Aligned_cols=170 Identities=19% Similarity=0.156 Sum_probs=114.4
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCccccc-CCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceee
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGI-IPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKIN 148 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 148 (658)
..++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|.+++..|..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4567777777777775544 55678888888888887765 677777788888888888887777777777788888888
Q ss_pred cccc-cCCC-CChhhhcCCCCCCEEeCCCC-CCccc-CCCCCCCCccc-cccccccCCCC--cc------cccCCCCCcE
Q 006178 149 LQSN-GLTG-RLPAELGNLISLEELHLDRN-RLQGA-VPAGSNSGYTA-NIHGMYASSAN--LT------GLCHLSQLKV 215 (658)
Q Consensus 149 Ls~N-~l~g-~~p~~~~~l~~L~~L~L~~N-~l~g~-~p~~~~~~~~~-~l~~~~l~~n~--l~------~~~~l~~L~~ 215 (658)
|++| .+++ .+|..+.++++|++|+|++| .+++. ++... .... ++..+++++|. ++ .+.++++|+.
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~--~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~ 226 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAV--AHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVH 226 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHH--HHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHH--HhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCE
Confidence 8887 5665 26666777888888888888 77643 22210 0112 56667777773 33 1345677888
Q ss_pred EEccCCc-CcccCcccCCC---CCCCccCCC
Q 006178 216 ADFSYNF-FVGSIPKCLEY---LPSTSFQGN 242 (658)
Q Consensus 216 l~ls~N~-l~g~ip~~l~~---l~~~~~~~n 242 (658)
|++++|. +++..+..+.. |..+++++|
T Consensus 227 L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 227 LDLSDSVMLKNDCFQEFFQLNYLQHLSLSRC 257 (336)
T ss_dssp EECTTCTTCCGGGGGGGGGCTTCCEEECTTC
T ss_pred EeCCCCCcCCHHHHHHHhCCCCCCEeeCCCC
Confidence 8888877 66565655443 344555655
No 376
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.48 E-value=6e-14 Score=137.68 Aligned_cols=169 Identities=20% Similarity=0.179 Sum_probs=144.8
Q ss_pred CCCEEEEEecCCC-CcccCCccccCCCCCcEEeccC-CcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccc-
Q 006178 69 RDRVLKINISGSS-LKGFLAPELGLLTYLQELILHG-NNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLV- 145 (658)
Q Consensus 69 ~~~v~~l~L~~n~-l~g~~~~~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~- 145 (658)
..+++.|+|++|. +++..+..|..+++|++|+|++ |++++..+..|.++++|++|+|++|.+++ +|. +..+++|+
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 3579999999997 8887777899999999999999 99998878889999999999999999995 776 88899998
Q ss_pred --eeecccc-cCCCCChhhhcCCCCCC-EEeCCCCCCcccCCCCCCCCccccccccccCCCC-ccc-----ccCC-CCCc
Q 006178 146 --KINLQSN-GLTGRLPAELGNLISLE-ELHLDRNRLQGAVPAGSNSGYTANIHGMYASSAN-LTG-----LCHL-SQLK 214 (658)
Q Consensus 146 --~L~Ls~N-~l~g~~p~~~~~l~~L~-~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~-l~~-----~~~l-~~L~ 214 (658)
.|++++| .+++..+..|.++++|+ +|++++|+++ .+|...... ..+..+++++|. ++. +..+ ++|+
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~--~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~ 208 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG--TKLDAVYLNKNKYLTVIDKDAFGGVYSGPS 208 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT--CEEEEEECTTCTTCCEECTTTTTTCSBCCS
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC--CCCCEEEcCCCCCcccCCHHHhhccccCCc
Confidence 9999999 99977777799999999 9999999999 777754443 578889999994 764 4567 8999
Q ss_pred EEEccCCcCcccCcccCCCCCCCccCCC
Q 006178 215 VADFSYNFFVGSIPKCLEYLPSTSFQGN 242 (658)
Q Consensus 215 ~l~ls~N~l~g~ip~~l~~l~~~~~~~n 242 (658)
.|++++|++++..+..+.+++.+.+.++
T Consensus 209 ~L~l~~N~l~~l~~~~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 209 LLDVSQTSVTALPSKGLEHLKELIARNT 236 (239)
T ss_dssp EEECTTCCCCCCCCTTCTTCSEEECTTC
T ss_pred EEECCCCccccCChhHhccCceeeccCc
Confidence 9999999999655556778887777654
No 377
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.48 E-value=2.5e-13 Score=151.05 Aligned_cols=53 Identities=30% Similarity=0.394 Sum_probs=27.5
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCC
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 131 (658)
+++.|+|++|.++. +|. .+++|++|+|++|++++ +|. .+++|++|+|++|+++
T Consensus 62 ~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~ 114 (622)
T 3g06_A 62 HITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLT 114 (622)
T ss_dssp TCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCC
T ss_pred CCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCC
Confidence 45556666665553 333 34555555555555553 333 3445555555555554
No 378
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.48 E-value=8.3e-14 Score=138.66 Aligned_cols=161 Identities=23% Similarity=0.293 Sum_probs=126.7
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
.++.++++++.+++.. .+..+++|+.|++++|.++. +| .+..+++|++|+|++|++++ +|. +..+++|+.|+|+
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECC
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECC
Confidence 3456677888887643 68899999999999999984 66 78999999999999999995 454 9999999999999
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc---ccCCCCCcEEEccCCcCcccC
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG---LCHLSQLKVADFSYNFFVGSI 227 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~---~~~l~~L~~l~ls~N~l~g~i 227 (658)
+|++++ +|.. .. ++|++|+|++|++++ +|. .....++..+++++|.+++ +..+++|+.|++++|.+++.
T Consensus 94 ~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~~---l~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~- 165 (263)
T 1xeu_A 94 RNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TDS---LIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNT- 165 (263)
T ss_dssp SSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SGG---GTTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBC-
T ss_pred CCccCC-cCcc-cc-CcccEEEccCCccCC-Chh---hcCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcch-
Confidence 999995 5543 33 999999999999986 342 1223577788899988875 45678899999999999876
Q ss_pred cccCC---CCCCCccCCCccCC
Q 006178 228 PKCLE---YLPSTSFQGNCLQN 246 (658)
Q Consensus 228 p~~l~---~l~~~~~~~n~~~~ 246 (658)
..+. +|..+++++|.+..
T Consensus 166 -~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 166 -GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp -TTSTTCCCCCEEEEEEEEEEC
T ss_pred -HHhccCCCCCEEeCCCCcccC
Confidence 3444 44556777776554
No 379
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.47 E-value=1.4e-16 Score=151.69 Aligned_cols=134 Identities=22% Similarity=0.297 Sum_probs=112.8
Q ss_pred CEEEEEecCCCCcccCCc------cccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCccc
Q 006178 71 RVLKINISGSSLKGFLAP------ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGL 144 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~------~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 144 (658)
+++.++++.+.++|.+|. .+..+++|++|+|++|.+++ +| .+..+++|++|+|++|.++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 455666777777777766 89999999999999999997 77 8999999999999999998 789888888999
Q ss_pred ceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCc
Q 006178 145 VKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFV 224 (658)
Q Consensus 145 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~ 224 (658)
+.|+|++|++++ +| .+..+++|++|+|++|++++..+ +..+..+++|++|++++|.++
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~--------------------~~~l~~l~~L~~L~l~~N~l~ 153 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGE--------------------IDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHH--------------------HHHHTTTTTCSEEEECSCHHH
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhH--------------------HHHHhcCCCCCEEEecCCccc
Confidence 999999999996 66 68999999999999999874211 013556889999999999998
Q ss_pred ccCcc
Q 006178 225 GSIPK 229 (658)
Q Consensus 225 g~ip~ 229 (658)
+.+|.
T Consensus 154 ~~~~~ 158 (198)
T 1ds9_A 154 NDYKE 158 (198)
T ss_dssp HHHHT
T ss_pred ccccc
Confidence 88765
No 380
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=2.4e-13 Score=125.76 Aligned_cols=109 Identities=23% Similarity=0.254 Sum_probs=94.3
Q ss_pred CcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCC
Q 006178 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDR 175 (658)
Q Consensus 96 L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 175 (658)
.+.|++++|.++. +|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 5789999999985 777664 8999999999999988899999999999999999999977777789999999999999
Q ss_pred CCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCc
Q 006178 176 NRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (658)
Q Consensus 176 N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip 228 (658)
|+|++..+. .+..+++|+.|+|++|.|++..+
T Consensus 88 N~l~~~~~~---------------------~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRG---------------------AFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTT---------------------TTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHH---------------------HhcCCCCCCEEEeCCCCCCCCch
Confidence 999954432 24567889999999999986543
No 381
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.46 E-value=4.9e-15 Score=155.09 Aligned_cols=172 Identities=17% Similarity=0.140 Sum_probs=99.7
Q ss_pred EEecCCCCcccCCccccCCCCCcEEeccCCcccccCC----cccCCCC-CCCEEEccCCcCCCCCcccccCC-----ccc
Q 006178 75 INISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIP----KELGLLK-RLKILDLGTNQLTGPIPPEIGNL-----TGL 144 (658)
Q Consensus 75 l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p----~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l-----~~L 144 (658)
.+|+.|+++|.+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4566666766666666666667777777777665544 5556666 67777777777666555555554 667
Q ss_pred ceeecccccCCCCChhhhcC----C-CCCCEEeCCCCCCcccCCCCCCC---CccccccccccCCCCccc---------c
Q 006178 145 VKINLQSNGLTGRLPAELGN----L-ISLEELHLDRNRLQGAVPAGSNS---GYTANIHGMYASSANLTG---------L 207 (658)
Q Consensus 145 ~~L~Ls~N~l~g~~p~~~~~----l-~~L~~L~L~~N~l~g~~p~~~~~---~~~~~l~~~~l~~n~l~~---------~ 207 (658)
+.|+|++|.+++..+..++. + ++|++|+|++|++++..+..... .....+..+++++|.++. +
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 77777777776655554333 2 66777777777665433211100 001255566666666652 1
Q ss_pred cCCC-CCcEEEccCCcCcccCcccC--------CCCCCCccCCCccCC
Q 006178 208 CHLS-QLKVADFSYNFFVGSIPKCL--------EYLPSTSFQGNCLQN 246 (658)
Q Consensus 208 ~~l~-~L~~l~ls~N~l~g~ip~~l--------~~l~~~~~~~n~~~~ 246 (658)
..+. +|+.|+|++|.+++..+..+ .+|..+++++|.+..
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~ 210 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGL 210 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCCh
Confidence 2233 66777777776665554321 245556666665554
No 382
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.45 E-value=8.4e-15 Score=151.58 Aligned_cols=171 Identities=19% Similarity=0.189 Sum_probs=129.5
Q ss_pred CCEEEEEecCCCCccc-CCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCC-cCCCC-CcccccCCcccce
Q 006178 70 DRVLKINISGSSLKGF-LAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTN-QLTGP-IPPEIGNLTGLVK 146 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~-~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N-~l~g~-~p~~~~~l~~L~~ 146 (658)
.+++.|+|++|.+++. ++..+..+++|++|+|++|.+++..|..++.+++|++|+|++| .+++. +|..+.++++|+.
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 5789999999998876 7888899999999999999999888888999999999999999 67753 6777888999999
Q ss_pred eecccc-cCCCC-ChhhhcCCC-CCCEEeCCCC--CCc-ccCCCCCCCCccccccccccCCCC-cc-----cccCCCCCc
Q 006178 147 INLQSN-GLTGR-LPAELGNLI-SLEELHLDRN--RLQ-GAVPAGSNSGYTANIHGMYASSAN-LT-----GLCHLSQLK 214 (658)
Q Consensus 147 L~Ls~N-~l~g~-~p~~~~~l~-~L~~L~L~~N--~l~-g~~p~~~~~~~~~~l~~~~l~~n~-l~-----~~~~l~~L~ 214 (658)
|+|++| .+++. +|..+..++ +|++|+|++| .++ +.+|... ....++..+++++|. ++ .+..+++|+
T Consensus 173 L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~--~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~ 250 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLV--RRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQ 250 (336)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHH--HHCTTCSEEECTTCTTCCGGGGGGGGGCTTCC
T ss_pred EcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHH--hhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCC
Confidence 999999 88864 677888999 9999999999 455 3343311 112466777777777 43 356778899
Q ss_pred EEEccCCc-CcccCccc---CCCCCCCccCCC
Q 006178 215 VADFSYNF-FVGSIPKC---LEYLPSTSFQGN 242 (658)
Q Consensus 215 ~l~ls~N~-l~g~ip~~---l~~l~~~~~~~n 242 (658)
.|++++|. ++...... +.+|..+++.+|
T Consensus 251 ~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 251 HLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp EEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred EeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 99999885 22211112 345556677776
No 383
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.45 E-value=2e-13 Score=150.74 Aligned_cols=107 Identities=27% Similarity=0.322 Sum_probs=57.8
Q ss_pred CcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCC
Q 006178 96 LQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDR 175 (658)
Q Consensus 96 L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 175 (658)
|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..++++++|+.|+|++|+|++ +| .+++|++|++|+|++
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 4445555555553 343 555555555555555555 455555555555555555555553 44 455555555555555
Q ss_pred CCCcccC-CCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCc
Q 006178 176 NRLQGAV-PAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP 228 (658)
Q Consensus 176 N~l~g~~-p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip 228 (658)
|+|++.+ |. .+..+++|+.|+|++|.|++.+|
T Consensus 518 N~l~~~~~p~---------------------~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 518 NRLQQSAAIQ---------------------PLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SCCCSSSTTG---------------------GGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCcH---------------------HHhcCCCCCEEEecCCcCCCCcc
Confidence 5555433 32 23456667777777777765544
No 384
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.45 E-value=1.9e-13 Score=142.14 Aligned_cols=108 Identities=25% Similarity=0.260 Sum_probs=94.4
Q ss_pred CCccceeecCCCCCEEEEEecCC-CCcccCCccccCCCCCcEEeccC-CcccccCCcccCCCCCCCEEEccCCcCCCCCc
Q 006178 58 CHWTGIACSDARDRVLKINISGS-SLKGFLAPELGLLTYLQELILHG-NNLIGIIPKELGLLKRLKILDLGTNQLTGPIP 135 (658)
Q Consensus 58 c~w~gv~C~~~~~~v~~l~L~~n-~l~g~~~~~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p 135 (658)
|.|..|.|+ ++ +|++ +|. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|
T Consensus 8 C~~~~v~~~------------~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 73 (347)
T 2ifg_A 8 HGSSGLRCT------------RDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAP 73 (347)
T ss_dssp SSSSCEECC------------SSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECT
T ss_pred ccCCEEEcC------------CCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCH
Confidence 777777775 44 6766 777 99999999999996 99999888899999999999999999999888
Q ss_pred ccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcc
Q 006178 136 PEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQG 180 (658)
Q Consensus 136 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g 180 (658)
..|.+|++|+.|+|++|+|++..|..|..++ |+.|+|++|.|..
T Consensus 74 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 74 DAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp TGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred HHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 8999999999999999999975555566665 9999999999873
No 385
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.44 E-value=5.9e-13 Score=123.52 Aligned_cols=106 Identities=24% Similarity=0.276 Sum_probs=91.8
Q ss_pred cEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCC
Q 006178 97 QELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRN 176 (658)
Q Consensus 97 ~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 176 (658)
+.+++++|++. .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 68999999996 6787665 89999999999999888999999999999999999999766666799999999999999
Q ss_pred CCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCccc
Q 006178 177 RLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGS 226 (658)
Q Consensus 177 ~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ 226 (658)
+|++ +|.. .+..+++|+.|+|++|.|...
T Consensus 92 ~l~~-l~~~--------------------~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKS-IPRG--------------------AFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCC-CCTT--------------------TTTTCTTCSEEECCSSCBCTT
T ss_pred ccce-eCHH--------------------HhccccCCCEEEeCCCCcccc
Confidence 9984 4431 255678999999999999844
No 386
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.38 E-value=6.2e-13 Score=123.75 Aligned_cols=131 Identities=20% Similarity=0.134 Sum_probs=103.6
Q ss_pred ccccCCCCCcEEeccCCcccccCCcccCCCC-CCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCC
Q 006178 88 PELGLLTYLQELILHGNNLIGIIPKELGLLK-RLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLI 166 (658)
Q Consensus 88 ~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 166 (658)
+.+.++.+|+.|+|++|+++. +|. +..+. +|++|+|++|.+++. ..++.+++|++|+|++|.+++..|..+..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 456788999999999999995 565 55554 999999999999964 6899999999999999999965555569999
Q ss_pred CCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCccc----CC---CCCCCcc
Q 006178 167 SLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIPKC----LE---YLPSTSF 239 (658)
Q Consensus 167 ~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip~~----l~---~l~~~~~ 239 (658)
+|++|+|++|+++ .+|. +..+..+++|+.|++++|.++ .+|.. +. ++..+++
T Consensus 89 ~L~~L~L~~N~i~-~~~~-------------------~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~ 147 (176)
T 1a9n_A 89 DLTELILTNNSLV-ELGD-------------------LDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDF 147 (176)
T ss_dssp TCCEEECCSCCCC-CGGG-------------------GGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETT
T ss_pred CCCEEECCCCcCC-cchh-------------------hHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCC
Confidence 9999999999996 4442 023567889999999999998 55653 44 4444556
Q ss_pred CCCc
Q 006178 240 QGNC 243 (658)
Q Consensus 240 ~~n~ 243 (658)
++|.
T Consensus 148 ~~n~ 151 (176)
T 1a9n_A 148 QKVK 151 (176)
T ss_dssp EECC
T ss_pred CcCC
Confidence 6553
No 387
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.37 E-value=1.6e-12 Score=135.32 Aligned_cols=171 Identities=19% Similarity=0.147 Sum_probs=133.6
Q ss_pred CCCEEEEEecCCCCcccCCc-cccCCCCCcE-EeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccce
Q 006178 69 RDRVLKINISGSSLKGFLAP-ELGLLTYLQE-LILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVK 146 (658)
Q Consensus 69 ~~~v~~l~L~~n~l~g~~~~-~~~~l~~L~~-L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 146 (658)
..+++.|+|++|.+.+.+|+ .|.++++|+. +++++|++++..|..|..+++|++|++++|++++..+..+....++..
T Consensus 53 l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~ 132 (350)
T 4ay9_X 53 FGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVL 132 (350)
T ss_dssp CTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEE
T ss_pred CCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhh
Confidence 35799999999999887765 6788988775 677789999888999999999999999999999766667777888899
Q ss_pred eeccc-ccCCCCChhhhcCCC-CCCEEeCCCCCCcccCCCCCCCCccccccccccCC-CCccc-----ccCCCCCcEEEc
Q 006178 147 INLQS-NGLTGRLPAELGNLI-SLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASS-ANLTG-----LCHLSQLKVADF 218 (658)
Q Consensus 147 L~Ls~-N~l~g~~p~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~-n~l~~-----~~~l~~L~~l~l 218 (658)
|++++ |++....+..|..+. .|+.|+|++|+|+ .+|...... ..+..++++. |.++. +..+++|+.||+
T Consensus 133 l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~--~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdL 209 (350)
T 4ay9_X 133 LDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNG--TQLDELNLSDNNNLEELPNDVFHGASGPVILDI 209 (350)
T ss_dssp EEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTT--EEEEEEECTTCTTCCCCCTTTTTTEECCSEEEC
T ss_pred hhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccc--cchhHHhhccCCcccCCCHHHhccCcccchhhc
Confidence 99966 567654555677765 6899999999998 566644332 3566677764 55543 467889999999
Q ss_pred cCCcCcccCcccCCCCCCCccCCC
Q 006178 219 SYNFFVGSIPKCLEYLPSTSFQGN 242 (658)
Q Consensus 219 s~N~l~g~ip~~l~~l~~~~~~~n 242 (658)
++|+|+...+..+.+++.+...++
T Consensus 210 s~N~l~~lp~~~~~~L~~L~~l~~ 233 (350)
T 4ay9_X 210 SRTRIHSLPSYGLENLKKLRARST 233 (350)
T ss_dssp TTSCCCCCCSSSCTTCCEEECTTC
T ss_pred CCCCcCccChhhhccchHhhhccC
Confidence 999999544456788887776554
No 388
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.26 E-value=1.2e-11 Score=128.40 Aligned_cols=105 Identities=20% Similarity=0.136 Sum_probs=89.3
Q ss_pred cEEeccCC-cccccCCcccCCCCCCCEEEccC-CcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCC
Q 006178 97 QELILHGN-NLIGIIPKELGLLKRLKILDLGT-NQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLD 174 (658)
Q Consensus 97 ~~L~L~~N-~l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~ 174 (658)
..++++++ +|++ +|. |..+++|+.|+|++ |+|++..|..|++|++|+.|+|++|+|++..|..|.+|++|++|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35788988 8985 888 99999999999996 99998777899999999999999999999999999999999999999
Q ss_pred CCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcc
Q 006178 175 RNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 175 ~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g 225 (658)
+|+|++ +|... +..+. |+.|+|++|.|..
T Consensus 89 ~N~l~~-~~~~~--------------------~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALES-LSWKT--------------------VQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSC-CCSTT--------------------TCSCC-CCEEECCSSCCCC
T ss_pred CCccce-eCHHH--------------------cccCC-ceEEEeeCCCccC
Confidence 999995 44322 11223 8888888888864
No 389
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.24 E-value=1.9e-11 Score=121.59 Aligned_cols=137 Identities=14% Similarity=0.097 Sum_probs=104.5
Q ss_pred hcccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCCccceeeEEecCCCCceEEEEE
Q 006178 362 FSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 362 f~~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+...++.|+.+.||++... ++.+++|........ ....+.+|+++++.+ .|..+.++++++.+.+ ..++|||
T Consensus 18 ~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~----~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~--~~~lv~e 90 (263)
T 3tm0_A 18 CVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKG----TTYDVEREKDMMLWLEGKLPVPKVLHFERHDG--WSNLLMS 90 (263)
T ss_dssp EEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTT----STTCHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEEEE
T ss_pred eEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCC----CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCC--ceEEEEE
Confidence 3467788888999999865 578888876432111 123588999999999 4778889999988766 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC--------------------------------------
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-------------------------------------- 482 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-------------------------------------- 482 (658)
|++|.+|.+.+. +......++.+++++|+.||+..
T Consensus 91 ~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (263)
T 3tm0_A 91 EADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP 163 (263)
T ss_dssp CCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred ecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence 999999987642 11234578899999999999810
Q ss_pred ------------------CCCeeeccCCCcceeecCCCCceeccccch
Q 006178 483 ------------------GPPFTISELNSSAVYLTEDFSPKLVDFDSW 512 (658)
Q Consensus 483 ------------------~~~ivHrDlkp~NILl~~~~~~kl~DFGla 512 (658)
.+.++|+|++|.||+++++..+.|+||+.+
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a 211 (263)
T 3tm0_A 164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRS 211 (263)
T ss_dssp SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTC
T ss_pred CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhc
Confidence 136999999999999987656679999854
No 390
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.24 E-value=1.2e-13 Score=149.37 Aligned_cols=177 Identities=23% Similarity=0.160 Sum_probs=115.1
Q ss_pred CCEEEEEecCCCCcccCCcc-ccCCCCCcEEeccCCcccc----cCCcccCCCCCCCEEEccCCcCCCCCccccc-CCc-
Q 006178 70 DRVLKINISGSSLKGFLAPE-LGLLTYLQELILHGNNLIG----IIPKELGLLKRLKILDLGTNQLTGPIPPEIG-NLT- 142 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~-~~~l~~L~~L~L~~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~- 142 (658)
.+++.|+|++|.++...... +..+++|++|+|++|.++. .+|..+..+++|++|||++|.++...+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 35778888888876543333 6677888888888888774 3566677778888888888887654333332 344
Q ss_pred ---ccceeecccccCCC----CChhhhcCCCCCCEEeCCCCCCcccCCCCCCC---CccccccccccCCCCccc------
Q 006178 143 ---GLVKINLQSNGLTG----RLPAELGNLISLEELHLDRNRLQGAVPAGSNS---GYTANIHGMYASSANLTG------ 206 (658)
Q Consensus 143 ---~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~---~~~~~l~~~~l~~n~l~~------ 206 (658)
+|++|+|++|.++. .+|..+..+++|++|+|++|.+++..+..... ....++..++++.|.++.
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 58888888888873 55777888888888888888876432221000 001246667777777654
Q ss_pred ---ccCCCCCcEEEccCCcCcccCccc--------CCCCCCCccCCCccCC
Q 006178 207 ---LCHLSQLKVADFSYNFFVGSIPKC--------LEYLPSTSFQGNCLQN 246 (658)
Q Consensus 207 ---~~~l~~L~~l~ls~N~l~g~ip~~--------l~~l~~~~~~~n~~~~ 246 (658)
+..+++|+.|++++|.++...+.. ..++..+++++|.+..
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~ 213 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTS 213 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBT
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcH
Confidence 234577888888888876543322 2366777777775544
No 391
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.23 E-value=2.4e-13 Score=147.10 Aligned_cols=175 Identities=19% Similarity=0.163 Sum_probs=130.1
Q ss_pred CCEEEEEecCCCCccc----CCccccCCCCCcEEeccCCcccccC-----CcccCCCCCCCEEEccCCcCCCC----Ccc
Q 006178 70 DRVLKINISGSSLKGF----LAPELGLLTYLQELILHGNNLIGII-----PKELGLLKRLKILDLGTNQLTGP----IPP 136 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~----~~~~~~~l~~L~~L~L~~N~l~g~~-----p~~~~~l~~L~~L~Ls~N~l~g~----~p~ 136 (658)
.+++.|+|++|.+++. ++..+..+++|++|+|++|.+++.- +..+..+++|++|+|++|.+++. +|.
T Consensus 199 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 278 (461)
T 1z7x_W 199 CQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCR 278 (461)
T ss_dssp CCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred CCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHH
Confidence 4788999999999874 5777888999999999999987642 33334688999999999999854 677
Q ss_pred cccCCcccceeecccccCCCCChhhhcC-----CCCCCEEeCCCCCCccc----CCCCCCCCccccccccccCCCCcccc
Q 006178 137 EIGNLTGLVKINLQSNGLTGRLPAELGN-----LISLEELHLDRNRLQGA----VPAGSNSGYTANIHGMYASSANLTGL 207 (658)
Q Consensus 137 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-----l~~L~~L~L~~N~l~g~----~p~~~~~~~~~~l~~~~l~~n~l~~~ 207 (658)
.+..+++|+.|+|++|.+++..+..+.. .++|++|+|++|.+++. +|... .....+..+++++|.++..
T Consensus 279 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l--~~~~~L~~L~Ls~n~i~~~ 356 (461)
T 1z7x_W 279 VLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVL--AQNRFLLELQISNNRLEDA 356 (461)
T ss_dssp HHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHH--HHCSSCCEEECCSSBCHHH
T ss_pred HHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHH--hhCCCccEEEccCCccccc
Confidence 7888999999999999987654444443 36899999999998754 22110 0114667788888887641
Q ss_pred -----c-----CCCCCcEEEccCCcCcc----cCcccC---CCCCCCccCCCccCC
Q 006178 208 -----C-----HLSQLKVADFSYNFFVG----SIPKCL---EYLPSTSFQGNCLQN 246 (658)
Q Consensus 208 -----~-----~l~~L~~l~ls~N~l~g----~ip~~l---~~l~~~~~~~n~~~~ 246 (658)
. ..++|+.|++++|.+++ .+|..+ .+|..+++++|.+..
T Consensus 357 ~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 357 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred cHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 1 15689999999999986 677654 566677888887654
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.20 E-value=1e-13 Score=131.83 Aligned_cols=131 Identities=25% Similarity=0.269 Sum_probs=109.4
Q ss_pred ccCCCCCcEEeccCCcccccCCc------ccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhc
Q 006178 90 LGLLTYLQELILHGNNLIGIIPK------ELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELG 163 (658)
Q Consensus 90 ~~~l~~L~~L~L~~N~l~g~~p~------~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 163 (658)
+.....++.++++.|.++|.+|. .+..+++|++|+|++|++++ +| .+..+++|+.|+|++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 55677889999999999999887 89999999999999999996 78 8999999999999999999 7898888
Q ss_pred CCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcCcccCc-cc---CCCCCCCcc
Q 006178 164 NLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFFVGSIP-KC---LEYLPSTSF 239 (658)
Q Consensus 164 ~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l~g~ip-~~---l~~l~~~~~ 239 (658)
.+++|++|+|++|++++ +| .+..+++|+.|++++|.+++..+ .. +.+|..+.+
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~----------------------~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l 147 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS----------------------GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLL 147 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH----------------------HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEE
T ss_pred cCCcCCEEECcCCcCCc-CC----------------------ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEe
Confidence 89999999999999985 33 24456789999999999985322 23 445666788
Q ss_pred CCCccCC
Q 006178 240 QGNCLQN 246 (658)
Q Consensus 240 ~~n~~~~ 246 (658)
.+|.+.+
T Consensus 148 ~~N~l~~ 154 (198)
T 1ds9_A 148 AGNPLYN 154 (198)
T ss_dssp CSCHHHH
T ss_pred cCCcccc
Confidence 8886654
No 393
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.14 E-value=1.3e-10 Score=115.09 Aligned_cols=130 Identities=15% Similarity=0.123 Sum_probs=95.9
Q ss_pred ccc-CCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCC--ccceeeEEecCCCCceEEEEEe
Q 006178 365 IIG-SSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN--TGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 365 ~lG-~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~~~~~~~~~lv~E~ 441 (658)
.++ .|..+.||++...+|..+++|..... ....+.+|+++++.+.+.+ +.+++++....+ ..++||||
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~--~~~~v~e~ 96 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAG--RDWLLLGE 96 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC-------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS--CEEEEEEC
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCcc-------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCC--CCEEEEEe
Confidence 344 56669999998877888999875322 1134778999999995544 566888887765 67999999
Q ss_pred cCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC---------------------------------------
Q 006178 442 ASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL--------------------------------------- 482 (658)
Q Consensus 442 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~--------------------------------------- 482 (658)
++|.+|. ... .+ ...++.++++.|+.||+..
T Consensus 97 i~G~~l~--~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T 1nd4_A 97 VPGQDLL--SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA 166 (264)
T ss_dssp CSSEETT--TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred cCCcccC--cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCcc
Confidence 9998884 221 12 2367788888888888742
Q ss_pred ----------------CCCeeeccCCCcceeecCCCCceeccccchh
Q 006178 483 ----------------GPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 483 ----------------~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
.+.++|+|++|.||+++++..++|+|||.+.
T Consensus 167 ~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 167 PAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1139999999999999887667799999653
No 394
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.11 E-value=3e-10 Score=118.41 Aligned_cols=143 Identities=11% Similarity=0.104 Sum_probs=105.1
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEe--eeccccchhhHHHHHHHHHHHHhcc--CCCccceeeEEecCCC-CceEEE
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLC--IKEEHWTGYLELYFQREVADLARIN--HENTGKLLGYCRESSP-FTRMLV 438 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~--~~~~~~~~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~-~~~~lv 438 (658)
+.|+.|.++.||+....+ ..+++|+.. ..... .....+.+|+.+++.+. +..+.++++++.+... ...++|
T Consensus 44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~---~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLL---PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp EECCC-CCSCEEEEECSS-CEEEEECCCC-------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred EEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCC---CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 578999999999998765 567777653 22111 11245788999999996 5568899998876531 146899
Q ss_pred EEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC------------------------------------
Q 006178 439 FDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL------------------------------------ 482 (658)
Q Consensus 439 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~------------------------------------ 482 (658)
|||++|..+.+... ..++..++..++.++++.|+.||+..
T Consensus 120 me~v~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 120 MEFVSGRVLWDQSL----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp EECCCCBCCCCTTC----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred EEecCCeecCCCcc----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 99999987754221 23788899999999999999999721
Q ss_pred -------------------CCCeeeccCCCcceeecCCCC--ceeccccchhh
Q 006178 483 -------------------GPPFTISELNSSAVYLTEDFS--PKLVDFDSWKT 514 (658)
Q Consensus 483 -------------------~~~ivHrDlkp~NILl~~~~~--~kl~DFGla~~ 514 (658)
.+.++|+|++|.||++++++. +.|+||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997753 58999997653
No 395
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.95 E-value=1.9e-09 Score=110.84 Aligned_cols=38 Identities=18% Similarity=0.193 Sum_probs=28.1
Q ss_pred CCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCC
Q 006178 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131 (658)
Q Consensus 93 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 131 (658)
+++|+.|+|.+ +++..-+.+|.+|++|+.|+|++|.+.
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~ 137 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAP 137 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCcc
Confidence 78888888877 777666667888888888888877754
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.94 E-value=4.2e-11 Score=125.06 Aligned_cols=111 Identities=20% Similarity=0.196 Sum_probs=79.7
Q ss_pred CCEEEEEecCCCCcccCCccccC-----CCCCcEEeccCCcccccCCccc-CCCCCCCEEEccCCcCCCCCcccc-----
Q 006178 70 DRVLKINISGSSLKGFLAPELGL-----LTYLQELILHGNNLIGIIPKEL-GLLKRLKILDLGTNQLTGPIPPEI----- 138 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~-----l~~L~~L~L~~N~l~g~~p~~~-~~l~~L~~L~Ls~N~l~g~~p~~~----- 138 (658)
..++.|+|++|.++..-...+.. .++|+.|+|++|.++..-...+ ..+++|+.|+|++|.++..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 46789999999987643333332 3689999999998865322222 345688999999998874333333
Q ss_pred cCCcccceeecccccCCC----CChhhhcCCCCCCEEeCCCCCCcc
Q 006178 139 GNLTGLVKINLQSNGLTG----RLPAELGNLISLEELHLDRNRLQG 180 (658)
Q Consensus 139 ~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~L~~N~l~g 180 (658)
...++|+.|+|++|.++. .++..+..+++|++|+|++|.++.
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~ 197 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGD 197 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCc
Confidence 346789999999999864 345556788899999999998864
No 397
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.90 E-value=8.3e-10 Score=112.19 Aligned_cols=188 Identities=15% Similarity=0.096 Sum_probs=120.1
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhc-cCCC--ccceeeEEecCCC-CceEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARI-NHEN--TGKLLGYCRESSP-FTRMLVF 439 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l-~H~n--Iv~l~~~~~~~~~-~~~~lv~ 439 (658)
+.++.|.+..||+.. ..+++|.... ......+.+|+++++.+ .+.. +.+++.+....+. ...|+||
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~------~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm 95 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKH------SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF 95 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESS------HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred EecCCCCcceEEEEC----CEEEEEecCC------cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence 458899999999863 4677776421 12345788999999988 4433 3455544333221 1348999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhc--------------------------------------
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE-------------------------------------- 481 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~-------------------------------------- 481 (658)
|+++|.++.+.... .++..++..++.++++.++.||+.
T Consensus 96 ~~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
T 3sg8_A 96 TKIKGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK 171 (304)
T ss_dssp ECCCCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred cccCCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence 99999888754331 378888889999999999999961
Q ss_pred -----------------CCCCeeeccCCCcceeecC--CCCceeccccchhhhhhcCC--CCCCc---ccc-------cC
Q 006178 482 -----------------LGPPFTISELNSSAVYLTE--DFSPKLVDFDSWKTILARSE--KNPGT---LGS-------QG 530 (658)
Q Consensus 482 -----------------~~~~ivHrDlkp~NILl~~--~~~~kl~DFGla~~~~~~~~--~~~~~---~~~-------~~ 530 (658)
..+.++|+|++|.||++++ ...+.|+||+.+..-....+ ..... .+. .+
T Consensus 172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~ 251 (304)
T 3sg8_A 172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNH 251 (304)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHH
Confidence 1146899999999999998 45678999997654211000 00000 000 00
Q ss_pred ccccC-CcccccCCCCccccchhhHHHHHHHHhCCCCC
Q 006178 531 AICIL-PSSLEARHLDVQGNIYAFGVLLLEIISGRPPC 567 (658)
Q Consensus 531 ~~~~a-PE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~ 567 (658)
|.... |+... ......+.|++|.++|++.+|..+|
T Consensus 252 Y~~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 252 YKHKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HTCSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cCCCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 00011 11111 1122358999999999999999875
No 398
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.84 E-value=2e-10 Score=112.90 Aligned_cols=127 Identities=22% Similarity=0.158 Sum_probs=86.7
Q ss_pred CCCCccceeecCCCCCEEEEEecC---CCCcccCCc-c-----------------------ccCCCCCcE--EeccCCcc
Q 006178 56 DPCHWTGIACSDARDRVLKINISG---SSLKGFLAP-E-----------------------LGLLTYLQE--LILHGNNL 106 (658)
Q Consensus 56 ~~c~w~gv~C~~~~~~v~~l~L~~---n~l~g~~~~-~-----------------------~~~l~~L~~--L~L~~N~l 106 (658)
..|.|.|+.|+....+|..+-..+ ..+.+.+++ . +...+.|.. ++++.|..
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~ 155 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRR 155 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSH
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCCHH
Confidence 368899999986555665555544 222333332 1 222233333 56666733
Q ss_pred ---cccCCcccCCCCCCCEEEccCCcCCC--CCcccccCCcccceeecccccCCCCChhhhcCCC--CCCEEeCCCCCCc
Q 006178 107 ---IGIIPKELGLLKRLKILDLGTNQLTG--PIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLI--SLEELHLDRNRLQ 179 (658)
Q Consensus 107 ---~g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~--~L~~L~L~~N~l~ 179 (658)
.+.++....++++|+.|+||+|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.++
T Consensus 156 ~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~ 233 (267)
T 3rw6_A 156 SCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLC 233 (267)
T ss_dssp HHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTG
T ss_pred HHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCc
Confidence 22222223568899999999999997 5567778999999999999999964 4455555 9999999999999
Q ss_pred ccCCC
Q 006178 180 GAVPA 184 (658)
Q Consensus 180 g~~p~ 184 (658)
+.+|.
T Consensus 234 ~~~~~ 238 (267)
T 3rw6_A 234 DTFRD 238 (267)
T ss_dssp GGCSS
T ss_pred cccCc
Confidence 87773
No 399
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.66 E-value=1.4e-07 Score=96.43 Aligned_cols=130 Identities=14% Similarity=0.121 Sum_probs=96.7
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccC----CCccceeeEEecCCCCceEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINH----ENTGKLLGYCRESSPFTRMLVF 439 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H----~nIv~l~~~~~~~~~~~~~lv~ 439 (658)
+.++.|....||+. +..+++|.... ......+.+|.++++.+.+ ..+.+++++ + ..++||
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~------~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~--~~~lvm 106 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKR------DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----S--DRFNIM 106 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS------HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----C--SSCEEE
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCc------HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----C--CcEEEE
Confidence 67899999999998 56777776421 1223458899999999865 234555554 2 348999
Q ss_pred EecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCC------------------------------------
Q 006178 440 DYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELG------------------------------------ 483 (658)
Q Consensus 440 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~------------------------------------ 483 (658)
||++|.++.+.... .++..++..++.++++.++.||+...
T Consensus 107 e~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (320)
T 3r70_A 107 KYIKGERITYEQYH----KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLT 182 (320)
T ss_dssp ECCCCBCCCHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred eecCCccccccccc----cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccc
Confidence 99999888743321 36777888888899999888885321
Q ss_pred ------------------------CCeeeccCCCcceeecCCCCceeccccchh
Q 006178 484 ------------------------PPFTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 484 ------------------------~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
+.++|+|++|.||+++++..+.|+||+.+.
T Consensus 183 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~ 236 (320)
T 3r70_A 183 DEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFN 236 (320)
T ss_dssp HHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCE
T ss_pred ccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccc
Confidence 235999999999999986667999999764
No 400
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.65 E-value=3.2e-09 Score=118.37 Aligned_cols=111 Identities=12% Similarity=0.079 Sum_probs=67.4
Q ss_pred CCEEEEEecCCCCcccCCccccCC--CCCcEEeccCCc-ccc-cCCcccCCCCCCCEEEccCCcCCCC----CcccccCC
Q 006178 70 DRVLKINISGSSLKGFLAPELGLL--TYLQELILHGNN-LIG-IIPKELGLLKRLKILDLGTNQLTGP----IPPEIGNL 141 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l--~~L~~L~L~~N~-l~g-~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l 141 (658)
.+++.|+|++|.+++..+..++.+ .+|++|+|++|. ++. .++.....+++|++|+|++|.+++. ++..+..+
T Consensus 112 ~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~ 191 (592)
T 3ogk_B 112 RQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHN 191 (592)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHC
T ss_pred CCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcC
Confidence 367888888888776555555543 347777777665 111 1222233567777777777776554 33344556
Q ss_pred cccceeecccccCC----CCChhhhcCCCCCCEEeCCCCCCcc
Q 006178 142 TGLVKINLQSNGLT----GRLPAELGNLISLEELHLDRNRLQG 180 (658)
Q Consensus 142 ~~L~~L~Ls~N~l~----g~~p~~~~~l~~L~~L~L~~N~l~g 180 (658)
++|+.|+|++|.++ +.++..+.++++|+.|+|++|.+.+
T Consensus 192 ~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~ 234 (592)
T 3ogk_B 192 TSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE 234 (592)
T ss_dssp CCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG
T ss_pred CCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH
Confidence 67777777777766 2334445566777777777766654
No 401
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.60 E-value=6.9e-09 Score=101.93 Aligned_cols=80 Identities=24% Similarity=0.248 Sum_probs=68.2
Q ss_pred cCCCCCcEEeccCCcccc--cCCcccCCCCCCCEEEccCCcCCCCCcccccCCc--ccceeecccccCCCCChh------
Q 006178 91 GLLTYLQELILHGNNLIG--IIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLT--GLVKINLQSNGLTGRLPA------ 160 (658)
Q Consensus 91 ~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~--~L~~L~Ls~N~l~g~~p~------ 160 (658)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 568999999999999998 5667788999999999999999964 4455555 999999999999987763
Q ss_pred -hhcCCCCCCEEe
Q 006178 161 -ELGNLISLEELH 172 (658)
Q Consensus 161 -~~~~l~~L~~L~ 172 (658)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 367899999887
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.60 E-value=6.9e-09 Score=108.22 Aligned_cols=137 Identities=19% Similarity=0.155 Sum_probs=99.3
Q ss_pred CCEEEEEecCCCCcccCCccc-cCCCCCcEEeccCCcccccCCccc-----CCCCCCCEEEccCCcCCC----CCccccc
Q 006178 70 DRVLKINISGSSLKGFLAPEL-GLLTYLQELILHGNNLIGIIPKEL-----GLLKRLKILDLGTNQLTG----PIPPEIG 139 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~-~~l~~L~~L~L~~N~l~g~~p~~~-----~~l~~L~~L~Ls~N~l~g----~~p~~~~ 139 (658)
..++.|+|++|.++..-...+ ..+.+|+.|+|++|.++..-...+ ...++|+.|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 589999999999975433333 346789999999999975433333 356889999999999864 2445567
Q ss_pred CCcccceeecccccCCC----CChhhhcCCCCCCEEeCCCCCCcccCCCCCCC--CccccccccccCCCCccc
Q 006178 140 NLTGLVKINLQSNGLTG----RLPAELGNLISLEELHLDRNRLQGAVPAGSNS--GYTANIHGMYASSANLTG 206 (658)
Q Consensus 140 ~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~--~~~~~l~~~~l~~n~l~~ 206 (658)
.+++|++|+|++|.++. .++..+...++|++|+|++|.++..-...... .....+..+++++|.++.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 88999999999999974 23566778899999999999997431110000 011357788999998864
No 403
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.56 E-value=4.9e-09 Score=116.91 Aligned_cols=167 Identities=11% Similarity=0.072 Sum_probs=111.1
Q ss_pred CEEEEEecCCC-Ccc-cCCccccCCCCCcEEeccCCccccc----CCcccCCCCCCCEEEccCCcCCC----CCcccccC
Q 006178 71 RVLKINISGSS-LKG-FLAPELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTG----PIPPEIGN 140 (658)
Q Consensus 71 ~v~~l~L~~n~-l~g-~~~~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g----~~p~~~~~ 140 (658)
+++.|+|+++. ++. .++..+..+++|++|+|++|.+++. ++..+..+++|+.|+|++|.+++ .++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 49999999886 211 1223345789999999999998765 44455678999999999999973 34455678
Q ss_pred CcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCC---CCCCccccccccccCCCCccc----ccCCCCC
Q 006178 141 LTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG---SNSGYTANIHGMYASSANLTG----LCHLSQL 213 (658)
Q Consensus 141 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~---~~~~~~~~l~~~~l~~n~l~~----~~~l~~L 213 (658)
+++|+.|+|++|.+.+ +|..+.++++|++|+++.+... ++.. .......++..+.++.+.... +..+++|
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~--~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L 295 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNED--IGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQI 295 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCC--TTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGC
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccc--cchHHHHHHhhccccccccCccccchhHHHHHHhhcCCC
Confidence 8999999999999995 8899999999999999864322 2210 001111233334443332211 3346678
Q ss_pred cEEEccCCcCcccCc----ccCCCCCCCccC
Q 006178 214 KVADFSYNFFVGSIP----KCLEYLPSTSFQ 240 (658)
Q Consensus 214 ~~l~ls~N~l~g~ip----~~l~~l~~~~~~ 240 (658)
+.|++++|.+++..+ ..+.+|..+.+.
T Consensus 296 ~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~ 326 (592)
T 3ogk_B 296 RKLDLLYALLETEDHCTLIQKCPNLEVLETR 326 (592)
T ss_dssp CEEEETTCCCCHHHHHHHHTTCTTCCEEEEE
T ss_pred cEEecCCCcCCHHHHHHHHHhCcCCCEEecc
Confidence 888888887665433 223444555555
No 404
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.46 E-value=1.4e-06 Score=88.11 Aligned_cols=135 Identities=10% Similarity=0.012 Sum_probs=94.5
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCC---CccceeeEEecCCCCceEEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE---NTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~---nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.++.|....||+. +..+++|.-. . ......+.+|+++|+.+.+. .+.+++.+..... ...++|||
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~--~----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~-g~~~~v~e 93 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPK--S----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSD-GNPFVGYR 93 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEES--S----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTT-SCEEEEEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecC--C----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCC-CceEEEEe
Confidence 46788988999998 5677777631 1 12345788999999999643 3667777765322 25689999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhc---------------------------------------
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTE--------------------------------------- 481 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~--------------------------------------- 481 (658)
|++|.++.+.... .++..++..++.++++.|+.||+.
T Consensus 94 ~i~G~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 94 KVQGQILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp CCCSEECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred ccCCeECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 9999888763221 245566666666776666666642
Q ss_pred ------------------CCCCeeeccCCCcceeecC---CCC-ceeccccchh
Q 006178 482 ------------------LGPPFTISELNSSAVYLTE---DFS-PKLVDFDSWK 513 (658)
Q Consensus 482 ------------------~~~~ivHrDlkp~NILl~~---~~~-~kl~DFGla~ 513 (658)
..+.++|+|++|.||++++ ++. +.|+||+.+.
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~ 223 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA 223 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence 2235699999999999987 455 4899998654
No 405
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.44 E-value=4.8e-07 Score=90.60 Aligned_cols=75 Identities=17% Similarity=0.224 Sum_probs=57.7
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCC---CccceeeEEecCCCCceEEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE---NTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~---nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.|+.|.++.||++...+|+.+++|+..... ......|.+|++.|+.+.+. .+.+++++. ..++|||
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~----~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~------~~~lvme 90 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDA----PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD------DRTLAME 90 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTC----CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE------TTEEEEE
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCC----cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec------CcEEEEE
Confidence 5789999999999999889999998853211 11134688999999999765 577888763 2389999
Q ss_pred ecCCCChh
Q 006178 441 YASNGTLY 448 (658)
Q Consensus 441 ~~~~gsL~ 448 (658)
|++++++.
T Consensus 91 ~l~g~~~~ 98 (288)
T 3d1u_A 91 WVDERPPT 98 (288)
T ss_dssp CCCCCCCC
T ss_pred ecccCCCC
Confidence 99988753
No 406
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.43 E-value=9.9e-07 Score=87.58 Aligned_cols=135 Identities=14% Similarity=0.055 Sum_probs=94.9
Q ss_pred ccccCCCCe-eEEEEEec-CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCceEEEEE
Q 006178 364 NIIGSSPDS-LVYKGTMK-GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 364 ~~lG~G~~g-~Vy~~~~~-~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+..|..| .||+.... ++..+++|.-... ....+.+|...|+.+. +--+.++++++.+.+ ..++|||
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~--~~~lvme 100 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS-------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD--DAWLLTT 100 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH-------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEEEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC-------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECC--eEEEEEE
Confidence 345556555 69998865 4567777764211 2346888999999883 445778899988776 7799999
Q ss_pred ecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC--------------------------------------
Q 006178 441 YASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTEL-------------------------------------- 482 (658)
Q Consensus 441 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-------------------------------------- 482 (658)
++++.++.+..... ......++.++++.|+-||+..
T Consensus 101 ~l~G~~~~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (272)
T 4gkh_A 101 AIPGKTAFQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGW 174 (272)
T ss_dssp CCCSEEHHHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTC
T ss_pred eeCCccccccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccch
Confidence 99998877665321 1233456666777777777410
Q ss_pred -----------------CCCeeeccCCCcceeecCCCCceeccccchh
Q 006178 483 -----------------GPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 483 -----------------~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
.+.++|+|+.+.|||+++++.+-|+||+.+.
T Consensus 175 ~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 175 PVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp CHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1248999999999999987777799998553
No 407
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.38 E-value=1.3e-08 Score=95.14 Aligned_cols=92 Identities=21% Similarity=0.165 Sum_probs=52.5
Q ss_pred ccccCCCCCcEEeccCC-ccccc----CCcccCCCCCCCEEEccCCcCCCC----CcccccCCcccceeecccccCCCC-
Q 006178 88 PELGLLTYLQELILHGN-NLIGI----IPKELGLLKRLKILDLGTNQLTGP----IPPEIGNLTGLVKINLQSNGLTGR- 157 (658)
Q Consensus 88 ~~~~~l~~L~~L~L~~N-~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~- 157 (658)
..+...+.|++|+|++| .+... +...+...++|++|+|++|.+... +...+...++|++|+|++|.++..
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 33455566666666666 55421 333445556677777777766421 222334445667777777766532
Q ss_pred ---ChhhhcCCCCCCEEeC--CCCCCc
Q 006178 158 ---LPAELGNLISLEELHL--DRNRLQ 179 (658)
Q Consensus 158 ---~p~~~~~l~~L~~L~L--~~N~l~ 179 (658)
+...+...++|++|+| ++|.++
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 3445556667777777 666665
No 408
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.34 E-value=1.2e-07 Score=105.53 Aligned_cols=107 Identities=16% Similarity=0.153 Sum_probs=79.0
Q ss_pred CCEEEEEecCCCCcccCCcccc-CCCCCcEEeccCC-ccccc-CCcccCCCCCCCEEEccCCcCCCCCccccc----CCc
Q 006178 70 DRVLKINISGSSLKGFLAPELG-LLTYLQELILHGN-NLIGI-IPKELGLLKRLKILDLGTNQLTGPIPPEIG----NLT 142 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~-~l~~L~~L~L~~N-~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~----~l~ 142 (658)
.+++.|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4788999999998877666675 6899999999998 45432 445555789999999999998766554443 667
Q ss_pred ccceeeccccc--CCC-CChhhhcCCCCCCEEeCCCC
Q 006178 143 GLVKINLQSNG--LTG-RLPAELGNLISLEELHLDRN 176 (658)
Q Consensus 143 ~L~~L~Ls~N~--l~g-~~p~~~~~l~~L~~L~L~~N 176 (658)
+|+.|+|++|. ++. .++..+.++++|++|+|++|
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 89999999887 221 12222355789999999888
No 409
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.33 E-value=6.6e-08 Score=90.20 Aligned_cols=111 Identities=17% Similarity=0.238 Sum_probs=87.6
Q ss_pred CCCEEEEEecCC-CCcc----cCCccccCCCCCcEEeccCCccccc----CCcccCCCCCCCEEEccCCcCCCC----Cc
Q 006178 69 RDRVLKINISGS-SLKG----FLAPELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTGP----IP 135 (658)
Q Consensus 69 ~~~v~~l~L~~n-~l~g----~~~~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p 135 (658)
...++.|+|++| .+.. .+...+...+.|++|+|++|.+... +...+...++|++|+|++|.|... +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 357899999999 8864 2445667789999999999999642 344556678999999999999743 45
Q ss_pred ccccCCcccceeec--ccccCCCC----ChhhhcCCCCCCEEeCCCCCCc
Q 006178 136 PEIGNLTGLVKINL--QSNGLTGR----LPAELGNLISLEELHLDRNRLQ 179 (658)
Q Consensus 136 ~~~~~l~~L~~L~L--s~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~ 179 (658)
..+...++|++|+| ++|.++.. +...+...++|++|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 56777889999999 88999743 3445666789999999999885
No 410
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.28 E-value=1e-06 Score=90.32 Aligned_cols=89 Identities=16% Similarity=0.077 Sum_probs=56.2
Q ss_pred CCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccc-eeecccccCCCCChhhhcCCCCCCEE
Q 006178 93 LTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLV-KINLQSNGLTGRLPAELGNLISLEEL 171 (658)
Q Consensus 93 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~-~L~Ls~N~l~g~~p~~~~~l~~L~~L 171 (658)
+++|+.|+|++|+++...+..|.++++|+.|+|++| ++..-+..|.++++|+ .|+|++ +++..-+..|.++++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 566777777766666555556666777777777666 5533345566666676 676666 5554445666667777777
Q ss_pred eCCCCCCcccCCC
Q 006178 172 HLDRNRLQGAVPA 184 (658)
Q Consensus 172 ~L~~N~l~g~~p~ 184 (658)
++++|+++ .|+.
T Consensus 303 ~l~~n~i~-~I~~ 314 (329)
T 3sb4_A 303 LATGDKIT-TLGD 314 (329)
T ss_dssp EECSSCCC-EECT
T ss_pred EeCCCccC-ccch
Confidence 77666666 4444
No 411
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.28 E-value=3.2e-08 Score=110.34 Aligned_cols=154 Identities=10% Similarity=-0.001 Sum_probs=99.5
Q ss_pred CCEEEEEecC---------CCCcccCCcccc-CCCCCcEEeccCCcccccCCcccC-CCCCCCEEEcc--C----CcCCC
Q 006178 70 DRVLKINISG---------SSLKGFLAPELG-LLTYLQELILHGNNLIGIIPKELG-LLKRLKILDLG--T----NQLTG 132 (658)
Q Consensus 70 ~~v~~l~L~~---------n~l~g~~~~~~~-~l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~Ls--~----N~l~g 132 (658)
.+++.|+|.+ +.+++.....+. .+++|+.|+++.|++++..+..+. .+++|+.|+|+ + |.+++
T Consensus 338 ~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~ 417 (594)
T 2p1m_B 338 KDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL 417 (594)
T ss_dssp TTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC
T ss_pred CCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC
Confidence 4678888843 445433222333 478888888888888776555554 57888999988 4 55652
Q ss_pred CC-----cccccCCcccceeecccccCCCCChhhhcC-CCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCccc
Q 006178 133 PI-----PPEIGNLTGLVKINLQSNGLTGRLPAELGN-LISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTG 206 (658)
Q Consensus 133 ~~-----p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~ 206 (658)
.. +..+..+++|+.|+|++ .+++..+..++. +++|+.|+|++|.+++..+..... ...++..+++++|.++.
T Consensus 418 ~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~-~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 418 EPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLS-GCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp CCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHH-HCTTCCEEEEESCSCCH
T ss_pred CchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHh-cCCCcCEEECcCCCCcH
Confidence 21 12256778888888876 666555556665 788888888888886543211000 02356667777777642
Q ss_pred ------ccCCCCCcEEEccCCcCcc
Q 006178 207 ------LCHLSQLKVADFSYNFFVG 225 (658)
Q Consensus 207 ------~~~l~~L~~l~ls~N~l~g 225 (658)
...+++|+.|++++|.++.
T Consensus 496 ~~~~~~~~~l~~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 496 KALLANASKLETMRSLWMSSCSVSF 520 (594)
T ss_dssp HHHHHTGGGGGGSSEEEEESSCCBH
T ss_pred HHHHHHHHhCCCCCEEeeeCCCCCH
Confidence 2346789999999998753
No 412
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.27 E-value=3.5e-06 Score=87.32 Aligned_cols=85 Identities=7% Similarity=-0.030 Sum_probs=54.6
Q ss_pred ccc-cCCCCeeEEEEEec-------CCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-C--CCccceeeEEecCCC
Q 006178 364 NII-GSSPDSLVYKGTMK-------GGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-H--ENTGKLLGYCRESSP 432 (658)
Q Consensus 364 ~~l-G~G~~g~Vy~~~~~-------~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H--~nIv~l~~~~~~~~~ 432 (658)
+.| +.|....+|+.... ++..+++|........ .......+.+|+.+++.+. + -.+.++++++.+.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~-~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDV-PVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGC-CSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCcc-ccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 457 88888999998765 2566777754221100 0000134678999998884 3 357788888765421
Q ss_pred -CceEEEEEecCCCChhh
Q 006178 433 -FTRMLVFDYASNGTLYE 449 (658)
Q Consensus 433 -~~~~lv~E~~~~gsL~~ 449 (658)
...++||||++|..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 14589999999877654
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.23 E-value=2.6e-07 Score=95.54 Aligned_cols=171 Identities=16% Similarity=0.117 Sum_probs=80.4
Q ss_pred CEEEEEecCCCCcc-c-------CCccccCCCCCcEEeccCCccc---------ccCCcccCCCCCCCEEEccCCcCCCC
Q 006178 71 RVLKINISGSSLKG-F-------LAPELGLLTYLQELILHGNNLI---------GIIPKELGLLKRLKILDLGTNQLTGP 133 (658)
Q Consensus 71 ~v~~l~L~~n~l~g-~-------~~~~~~~l~~L~~L~L~~N~l~---------g~~p~~~~~l~~L~~L~Ls~N~l~g~ 133 (658)
+|+.|.+......| . +..++..+++|+.|.+..+... +.++..+..+++|+.|+|++|.-. .
T Consensus 108 ~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~ 186 (362)
T 2ra8_A 108 SLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-S 186 (362)
T ss_dssp GCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-B
T ss_pred hcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-e
Confidence 45566665444432 1 1223445566666666544321 123333455666777777665211 2
Q ss_pred CcccccCCcccceeecccccCCCCChhhhc--CCCCCCEEeCCC--CCCccc--C---CCCCCCCccccccccccCCCCc
Q 006178 134 IPPEIGNLTGLVKINLQSNGLTGRLPAELG--NLISLEELHLDR--NRLQGA--V---PAGSNSGYTANIHGMYASSANL 204 (658)
Q Consensus 134 ~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~l~~L~~L~L~~--N~l~g~--~---p~~~~~~~~~~l~~~~l~~n~l 204 (658)
+|. + .+++|+.|+|..|.++......++ .+++|+.|+|+. |...|. + .........+++..+.+..|.+
T Consensus 187 l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i 264 (362)
T 2ra8_A 187 IGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEE 264 (362)
T ss_dssp CCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTT
T ss_pred ecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCC
Confidence 332 2 256667777666665433223333 566666666642 211111 0 0000000113444445544444
Q ss_pred cc-----c---cCCCCCcEEEccCCcCccc----Cccc---CCCCCCCccCCCcc
Q 006178 205 TG-----L---CHLSQLKVADFSYNFFVGS----IPKC---LEYLPSTSFQGNCL 244 (658)
Q Consensus 205 ~~-----~---~~l~~L~~l~ls~N~l~g~----ip~~---l~~l~~~~~~~n~~ 244 (658)
.. + ..+++|+.|+|+.|.++.. ++.. +.+|..++++.|++
T Consensus 265 ~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i 319 (362)
T 2ra8_A 265 QNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYL 319 (362)
T ss_dssp HHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBC
T ss_pred chHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcC
Confidence 31 1 1356777777777777653 2322 34555566666643
No 414
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.23 E-value=3.4e-06 Score=87.41 Aligned_cols=74 Identities=12% Similarity=0.024 Sum_probs=54.0
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCC--CccceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE--NTGKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~--nIv~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.++.|....+|+... ++..+++|..... ..+.+|+.+++.+... .+.++++++..... ..++||||
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~---------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g-~~~lv~e~ 115 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA---------DGFYKDRYVYRHFASAALPIPEVLDIGEFSES-LTYCISRR 115 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC---------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSS-CEEEEEEC
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch---------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCC-CeEEEEEe
Confidence 5688899999999886 4677777765211 2478899999998643 35678877766432 57999999
Q ss_pred cCCCChh
Q 006178 442 ASNGTLY 448 (658)
Q Consensus 442 ~~~gsL~ 448 (658)
++|.++.
T Consensus 116 l~G~~l~ 122 (362)
T 3ovc_A 116 AQGVTLQ 122 (362)
T ss_dssp CCSEETT
T ss_pred cCCCCcc
Confidence 9886654
No 415
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.19 E-value=5.4e-07 Score=93.13 Aligned_cols=154 Identities=20% Similarity=0.204 Sum_probs=90.5
Q ss_pred CCEEEEEecCCCCc---------ccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCccccc-
Q 006178 70 DRVLKINISGSSLK---------GFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIG- 139 (658)
Q Consensus 70 ~~v~~l~L~~n~l~---------g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~- 139 (658)
.+++.|.+.++... +.++..+..+++|+.|+|++|.-. .+|. +. +++|+.|+|..|.++...-..+.
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~ 215 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILG 215 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHH
Confidence 36777777654331 224444566788888888776311 2333 33 67888888877766532222333
Q ss_pred -CCcccceeeccc--ccCCCC-----Chhhh--cCCCCCCEEeCCCCCCcccCCCCCC-CCccccccccccCCCCccc--
Q 006178 140 -NLTGLVKINLQS--NGLTGR-----LPAEL--GNLISLEELHLDRNRLQGAVPAGSN-SGYTANIHGMYASSANLTG-- 206 (658)
Q Consensus 140 -~l~~L~~L~Ls~--N~l~g~-----~p~~~--~~l~~L~~L~L~~N~l~g~~p~~~~-~~~~~~l~~~~l~~n~l~~-- 206 (658)
.+++|+.|+|+. |...|. +...+ ..+++|++|+|++|.+++..+.... ....+++..++++.|.+..
T Consensus 216 ~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G 295 (362)
T 2ra8_A 216 SDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEG 295 (362)
T ss_dssp SBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHH
T ss_pred ccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHH
Confidence 677888887753 221111 11122 2467888888888877643221000 0123467777777777653
Q ss_pred -------ccCCCCCcEEEccCCcCccc
Q 006178 207 -------LCHLSQLKVADFSYNFFVGS 226 (658)
Q Consensus 207 -------~~~l~~L~~l~ls~N~l~g~ 226 (658)
+.++++|+.|++++|.++..
T Consensus 296 ~~~L~~~L~~l~~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 296 ARLLLDHVDKIKHLKFINMKYNYLSDE 322 (362)
T ss_dssp HHHHHTTHHHHTTCSEEECCSBBCCHH
T ss_pred HHHHHhhcccCCcceEEECCCCcCCHH
Confidence 34578999999999988644
No 416
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.10 E-value=1.5e-05 Score=83.77 Aligned_cols=143 Identities=14% Similarity=0.139 Sum_probs=88.0
Q ss_pred EEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeeccc
Q 006178 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (658)
Q Consensus 72 v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (658)
++.++|..+ ++..-...|.+ .+|+.++|.+ ++...-+.+|.++++|+.++|+.|.++ .+|.....+.+|+.+.|..
T Consensus 137 L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~ 212 (401)
T 4fdw_A 137 IAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPV 212 (401)
T ss_dssp CSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCT
T ss_pred ccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCC
Confidence 555666544 44433445555 3577777764 566555667778888888888888777 4554443467788888874
Q ss_pred ccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCc-----ccccCCCCCcEEEccCCcCc
Q 006178 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL-----TGLCHLSQLKVADFSYNFFV 224 (658)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l-----~~~~~l~~L~~l~ls~N~l~ 224 (658)
| ++..-...|.++++|+.++|..| ++ .|+...+.. ..+..+.+.. ++ ..|.++.+|+.+++.+|.+.
T Consensus 213 ~-l~~I~~~aF~~~~~L~~l~l~~~-l~-~I~~~aF~~--~~L~~i~lp~-~i~~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 213 T-LKEIGSQAFLKTSQLKTIEIPEN-VS-TIGQEAFRE--SGITTVKLPN-GVTNIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp T-CCEECTTTTTTCTTCCCEECCTT-CC-EECTTTTTT--CCCSEEEEET-TCCEECTTTTTTCTTCCEEEEESSCCC
T ss_pred c-hheehhhHhhCCCCCCEEecCCC-cc-Ccccccccc--CCccEEEeCC-CccEEChhHhhCCCCCCEEEeCCcccc
Confidence 4 55444566778888888888765 43 455443332 2344444422 22 23566778888888777664
No 417
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.01 E-value=3.7e-05 Score=80.67 Aligned_cols=167 Identities=11% Similarity=0.068 Sum_probs=90.1
Q ss_pred EEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCc---------
Q 006178 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLT--------- 142 (658)
Q Consensus 72 v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~--------- 142 (658)
++.++|.+ +++..-+..|.++++|+.++|++|+++..-...|. ..+|+.+.|..| ++..-...|.+++
T Consensus 159 L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~ 235 (401)
T 4fdw_A 159 VQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPE 235 (401)
T ss_dssp CCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCT
T ss_pred ceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCC
Confidence 55555553 44444444566666666666666555533333333 344555544422 3322223334444
Q ss_pred -------------ccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCc----ccCCCCCCCCccccccccccCCCCcc
Q 006178 143 -------------GLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ----GAVPAGSNSGYTANIHGMYASSANLT 205 (658)
Q Consensus 143 -------------~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~----g~~p~~~~~~~~~~l~~~~l~~n~l~ 205 (658)
+|+.+.| .|.++..-+..|.++++|+.+.+.+|.+. ..|+...+.+ ..++..+.+.. ++.
T Consensus 236 ~l~~I~~~aF~~~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~-c~~L~~l~l~~-~i~ 312 (401)
T 4fdw_A 236 NVSTIGQEAFRESGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEG-CPKLARFEIPE-SIR 312 (401)
T ss_dssp TCCEECTTTTTTCCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTT-CTTCCEECCCT-TCC
T ss_pred CccCccccccccCCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhC-CccCCeEEeCC-ceE
Confidence 4555555 23344334567889999999999888765 1355443332 23455555553 233
Q ss_pred -----cccCCCCCcEEEccCCcCcccCcccCC--CCCCCccCCCccC
Q 006178 206 -----GLCHLSQLKVADFSYNFFVGSIPKCLE--YLPSTSFQGNCLQ 245 (658)
Q Consensus 206 -----~~~~l~~L~~l~ls~N~l~g~ip~~l~--~l~~~~~~~n~~~ 245 (658)
.|.++.+|+.++|..| ++..-+.+|. +|..+.+.+|.+.
T Consensus 313 ~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 313 ILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNTGIKEVKVEGTTPP 358 (401)
T ss_dssp EECTTTTTTCCSCCEEEECTT-CCEECTTSSSSSCCCEEEECCSSCC
T ss_pred EEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCCCCCEEEEcCCCCc
Confidence 3667889999999665 4422233343 4556677777443
No 418
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.00 E-value=1.9e-05 Score=83.02 Aligned_cols=78 Identities=10% Similarity=-0.047 Sum_probs=48.4
Q ss_pred ccccCCCCeeEEEEEec-CCCeEEEEEEeeecc-ccc--hhhHHHHHHHHHHHHhccC--C-CccceeeEEecCCCCceE
Q 006178 364 NIIGSSPDSLVYKGTMK-GGPEIAVISLCIKEE-HWT--GYLELYFQREVADLARINH--E-NTGKLLGYCRESSPFTRM 436 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~-~~~~vavk~~~~~~~-~~~--~~~~~~~~~E~~~l~~l~H--~-nIv~l~~~~~~~~~~~~~ 436 (658)
+.||.|..+.||++... +++.+++|....... ... ....+++..|.++++.+.. + .+.+++.+. .+ ..+
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~--~~~ 111 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TE--MAV 111 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TT--TTE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CC--ccE
Confidence 57999999999999865 467888887543211 000 0122356789999988742 3 345666543 33 348
Q ss_pred EEEEecCCC
Q 006178 437 LVFDYASNG 445 (658)
Q Consensus 437 lv~E~~~~g 445 (658)
+||||+++.
T Consensus 112 lvmE~l~g~ 120 (397)
T 2olc_A 112 TVMEDLSHL 120 (397)
T ss_dssp EEECCCTTS
T ss_pred EEEEeCCCc
Confidence 999999763
No 419
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.91 E-value=6.7e-05 Score=76.90 Aligned_cols=138 Identities=15% Similarity=0.177 Sum_probs=77.7
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc--CCCccceeeE------EecCCCCce
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN--HENTGKLLGY------CRESSPFTR 435 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~--H~nIv~l~~~------~~~~~~~~~ 435 (658)
+.|+.|..+.||+....++ .+++|..... ...+..|..+++.+. .-.+.+++.. ....+ ..
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~--------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~--~~ 106 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP--------EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGS--FL 106 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC--------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETT--EE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC--------HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECC--EE
Confidence 4566677899999987665 4777776321 123445666666653 1133444431 12233 56
Q ss_pred EEEEEecCCCChh--------------hhhcc---CC--C-------CCCCHHHH-------------------------
Q 006178 436 MLVFDYASNGTLY--------------EHLHY---GE--R-------CQVSWTRR------------------------- 464 (658)
Q Consensus 436 ~lv~E~~~~gsL~--------------~~l~~---~~--~-------~~l~~~~~------------------------- 464 (658)
+++|||++|.++. ..+|. .. . ..-.|...
T Consensus 107 ~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 186 (346)
T 2q83_A 107 FVVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQ 186 (346)
T ss_dssp EEEEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHH
T ss_pred EEEEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHH
Confidence 8999999986542 01111 00 0 01123221
Q ss_pred ------HHHHHHHHHHHHHhhh----------cCCCCeeeccCCCcceeecCCCCceeccccch
Q 006178 465 ------MKIVIGIARGLKYLHT----------ELGPPFTISELNSSAVYLTEDFSPKLVDFDSW 512 (658)
Q Consensus 465 ------~~i~~qia~gL~yLH~----------~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 512 (658)
..+..++.+++++|+. ...+.++|+|+++.||+++.++.+.|+||+.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a 250 (346)
T 2q83_A 187 LYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTV 250 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhc
Confidence 0111224456677763 12458999999999999987888999999854
No 420
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.89 E-value=7.5e-05 Score=75.27 Aligned_cols=136 Identities=15% Similarity=0.096 Sum_probs=89.2
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc---CCCccceeeEEecCCCCceEEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN---HENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.|+.|....+|+.... +..+++|..... ....+.+|.+.|+.+. ...+.+++++....+ ..++|||
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~-------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g--~~~lvme 111 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS-------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQG--HSFLLLE 111 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG-------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSS--EEEEEEE
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc-------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCC--ceEEEEE
Confidence 56899999999999864 567777765321 2456889999999883 367889999887665 6799999
Q ss_pred ecCCCChhh-----------hhccCCC---C-----------------CCCHHHHH---HHHHH----------------
Q 006178 441 YASNGTLYE-----------HLHYGER---C-----------------QVSWTRRM---KIVIG---------------- 470 (658)
Q Consensus 441 ~~~~gsL~~-----------~l~~~~~---~-----------------~l~~~~~~---~i~~q---------------- 470 (658)
|+++..+.. .++.... . .-+|.+.. ++..+
T Consensus 112 ~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~ 191 (312)
T 3jr1_A 112 ALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDL 191 (312)
T ss_dssp CCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHH
T ss_pred eccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHH
Confidence 999876521 1222110 0 12455322 11111
Q ss_pred HHHH-HHHhhh-cCCCCeeeccCCCcceeecCCCCceecccc
Q 006178 471 IARG-LKYLHT-ELGPPFTISELNSSAVYLTEDFSPKLVDFD 510 (658)
Q Consensus 471 ia~g-L~yLH~-~~~~~ivHrDlkp~NILl~~~~~~kl~DFG 510 (658)
+.+. ...|.. ...|.++|+|+.+.|++++.++ +.|.||+
T Consensus 192 l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 192 IVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1111 123321 2356899999999999999887 8899984
No 421
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.70 E-value=0.00014 Score=72.67 Aligned_cols=74 Identities=18% Similarity=0.239 Sum_probs=52.4
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-C--CCccceeeEEecCCCCceEEEEE
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-H--ENTGKLLGYCRESSPFTRMLVFD 440 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H--~nIv~l~~~~~~~~~~~~~lv~E 440 (658)
+.+|.|..+.||+.+..+|+.+++|+-..... .....|.+|++.|+.+. . -.+.+++++. . .++|||
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~----~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~--~----~~lv~e 90 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAP----ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD--D----RTLAME 90 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCC----CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE--T----TEEEEE
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCc----chhhHHHHHHHHHHHHHhhCCCCcceEEecc--C----ceEEEE
Confidence 56899999999999999999999987532211 11235789999999884 2 2345555542 2 279999
Q ss_pred ecCCCCh
Q 006178 441 YASNGTL 447 (658)
Q Consensus 441 ~~~~gsL 447 (658)
|++.+..
T Consensus 91 ~l~~~~~ 97 (288)
T 3f7w_A 91 WVDERPP 97 (288)
T ss_dssp CCCCCCC
T ss_pred eecccCC
Confidence 9987644
No 422
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.61 E-value=0.00031 Score=74.33 Aligned_cols=80 Identities=11% Similarity=0.044 Sum_probs=45.0
Q ss_pred CCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccC---CCCccccchhhHHHHHH
Q 006178 483 GPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEAR---HLDVQGNIYAFGVLLLE 559 (658)
Q Consensus 483 ~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~---~~~~ksDVwS~Gvvl~e 559 (658)
.+.++|+|++|.|||+++++ ++|+||+.+..-....+.. .........|.+|+..... .-....++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIG-AYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHH-HHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHH-HHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 34899999999999998776 9999998765311000000 0000000123344433211 11233556678888888
Q ss_pred HHhCC
Q 006178 560 IISGR 564 (658)
Q Consensus 560 lltG~ 564 (658)
.++++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88753
No 423
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.36 E-value=6.5e-05 Score=68.24 Aligned_cols=83 Identities=14% Similarity=0.171 Sum_probs=42.0
Q ss_pred CCcEEeccCCcccccCCcccCCCCCCCEEEccCCc-CCCCCcccccCC----cccceeeccccc-CCCCChhhhcCCCCC
Q 006178 95 YLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQ-LTGPIPPEIGNL----TGLVKINLQSNG-LTGRLPAELGNLISL 168 (658)
Q Consensus 95 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l----~~L~~L~Ls~N~-l~g~~p~~~~~l~~L 168 (658)
.|+.|||+++.++..=-..+.++++|+.|+|+++. ++..-=..+..+ ++|++|+|++|. +|..=-..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 35555555555433212234556666666666653 432111223332 356667776653 543222345666777
Q ss_pred CEEeCCCCC
Q 006178 169 EELHLDRNR 177 (658)
Q Consensus 169 ~~L~L~~N~ 177 (658)
++|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 777777653
No 424
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.34 E-value=0.0012 Score=66.98 Aligned_cols=140 Identities=13% Similarity=0.087 Sum_probs=77.1
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCC--ccceeeE------EecCCCCce
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN--TGKLLGY------CRESSPFTR 435 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~------~~~~~~~~~ 435 (658)
+.|+.|....+|+....++ .+++|...... ..+.+..|+.+++.+.... +.+++.. ....+ ..
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~------~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g--~~ 98 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRV------EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSG--RP 98 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC---------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETT--EE
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCC------CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECC--EE
Confidence 4567788899999987665 57777664311 1224567888888774222 3444421 11122 46
Q ss_pred EEEEEecCCCChhhh--------------hcc---C-CCC---CC---CHHHHHH------------HHHHHHHHHHHhh
Q 006178 436 MLVFDYASNGTLYEH--------------LHY---G-ERC---QV---SWTRRMK------------IVIGIARGLKYLH 479 (658)
Q Consensus 436 ~lv~E~~~~gsL~~~--------------l~~---~-~~~---~l---~~~~~~~------------i~~qia~gL~yLH 479 (658)
+++|+|++|..+... ++. . ... .. .|..... +...+.+.+++++
T Consensus 99 ~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~ 178 (322)
T 2ppq_A 99 AALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLA 178 (322)
T ss_dssp EEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHH
T ss_pred EEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH
Confidence 899999988654210 111 0 000 01 1322111 0012344455555
Q ss_pred hc----CCCCeeeccCCCcceeecCCCCceeccccch
Q 006178 480 TE----LGPPFTISELNSSAVYLTEDFSPKLVDFDSW 512 (658)
Q Consensus 480 ~~----~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 512 (658)
+. ....++|+|+.+.||+++++..+.|+||+.+
T Consensus 179 ~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a 215 (322)
T 2ppq_A 179 AHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFA 215 (322)
T ss_dssp HHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred hhCcccCCcccCCCCCCccCEEEeCCceEEEecchhc
Confidence 32 1347999999999999998765689999854
No 425
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.33 E-value=0.00061 Score=69.49 Aligned_cols=31 Identities=13% Similarity=0.234 Sum_probs=26.2
Q ss_pred CCCeeeccCCCcceeecCC----CCceeccccchh
Q 006178 483 GPPFTISELNSSAVYLTED----FSPKLVDFDSWK 513 (658)
Q Consensus 483 ~~~ivHrDlkp~NILl~~~----~~~kl~DFGla~ 513 (658)
.+.++|+|+.+.||+++.+ ..+.|+||+.+.
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~ 216 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAK 216 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcC
Confidence 3479999999999999874 678999998654
No 426
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.23 E-value=0.0016 Score=65.36 Aligned_cols=70 Identities=13% Similarity=0.109 Sum_probs=42.2
Q ss_pred ccccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCc-cceeeEEecCCCCceEEEEEec
Q 006178 364 NIIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT-GKLLGYCRESSPFTRMLVFDYA 442 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~~~lv~E~~ 442 (658)
+.|+.|....+|+. ..+++|.-....... ....+|+.+++.+....+ .+++++..+ .-++++||+
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-----~~r~~E~~~l~~l~~~g~~P~~~~~~~~----~~~~v~e~i 89 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-----INRANEAVAAREAAKAGVSPEVLHVDPA----TGVMVTRYI 89 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC----C-----CCHHHHHHHHHHHHHTTSSCCEEEECTT----TCCEEEECC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccce-----eCHHHHHHHHHHHHHcCCCCceEEEECC----CCEEEEeec
Confidence 56888999999999 457777653221110 112468888887743223 466655432 237999999
Q ss_pred -CCCCh
Q 006178 443 -SNGTL 447 (658)
Q Consensus 443 -~~gsL 447 (658)
++.++
T Consensus 90 ~~g~~l 95 (301)
T 3dxq_A 90 AGAQTM 95 (301)
T ss_dssp TTCEEC
T ss_pred CCCccC
Confidence 65444
No 427
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.19 E-value=0.0051 Score=62.28 Aligned_cols=139 Identities=11% Similarity=0.082 Sum_probs=78.6
Q ss_pred cccCCCCeeEEEEEecCCCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCC--CccceeeE-----EecCCCCceEE
Q 006178 365 IIGSSPDSLVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARINHE--NTGKLLGY-----CRESSPFTRML 437 (658)
Q Consensus 365 ~lG~G~~g~Vy~~~~~~~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~--nIv~l~~~-----~~~~~~~~~~l 437 (658)
.++ |....||+....+|+.+++|....... ....+..|..+++.+... .+++++.. ....+ ..++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-----~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g--~~~~ 104 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERW-----TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQG--FYFA 104 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTS-----CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETT--EEEE
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCC-----CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECC--EEEE
Confidence 466 778899998877777888887642211 134567788888888422 24555543 11122 4578
Q ss_pred EEEecCCCChhh-----h---------hcc----C---CCCCCCHHHH----HHH---------------HHHHHHHHHH
Q 006178 438 VFDYASNGTLYE-----H---------LHY----G---ERCQVSWTRR----MKI---------------VIGIARGLKY 477 (658)
Q Consensus 438 v~E~~~~gsL~~-----~---------l~~----~---~~~~l~~~~~----~~i---------------~~qia~gL~y 477 (658)
+|||++|..+.. + ++. . .....++... ..+ ...+.+.++.
T Consensus 105 l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 184 (328)
T 1zyl_A 105 VFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAA 184 (328)
T ss_dssp EEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHH
Confidence 999998754421 0 110 0 0111232211 001 1111122333
Q ss_pred hhhc----CCCCeeeccCCCcceeecCCCCceeccccchh
Q 006178 478 LHTE----LGPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 478 LH~~----~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
+... ....++|+|+++.||+++ + .+.|+||+.+.
T Consensus 185 l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 185 VTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp HHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred HHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 3221 234689999999999999 4 88999998543
No 428
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.07 E-value=0.0016 Score=68.93 Aligned_cols=72 Identities=11% Similarity=0.090 Sum_probs=47.4
Q ss_pred ccccCCCCeeEEEEEecC--------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCc
Q 006178 364 NIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFT 434 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~ 434 (658)
+.|+.|....||++...+ ++.+++|..... . ....+.+|..+++.+. +.-..++++.+. +
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~----~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--- 147 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--E----TESHLVAESVIFTLLSERHLGPKLYGIFS--G--- 147 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--C----CHHHHHHHHHHHHHHHHTTSSSCEEEEET--T---
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--C----cHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C---
Confidence 568888899999998763 356776654211 1 1134568999999884 333467776553 2
Q ss_pred eEEEEEecCCCCh
Q 006178 435 RMLVFDYASNGTL 447 (658)
Q Consensus 435 ~~lv~E~~~~gsL 447 (658)
.+||||++|.++
T Consensus 148 -g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 -GRLEEYIPSRPL 159 (429)
T ss_dssp -EEEECCCCEEEC
T ss_pred -CEEEEEeCCccc
Confidence 489999986444
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.06 E-value=0.00015 Score=65.85 Aligned_cols=84 Identities=13% Similarity=0.100 Sum_probs=62.9
Q ss_pred CCEEEEEecCCCCcccCCccccCCCCCcEEeccCCc-ccccCCcccCCC----CCCCEEEccCCc-CCCCCcccccCCcc
Q 006178 70 DRVLKINISGSSLKGFLAPELGLLTYLQELILHGNN-LIGIIPKELGLL----KRLKILDLGTNQ-LTGPIPPEIGNLTG 143 (658)
Q Consensus 70 ~~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l----~~L~~L~Ls~N~-l~g~~p~~~~~l~~ 143 (658)
-+++.|||+++.++..=-..+..+++|+.|+|+++. ++..-=..+..+ ++|++|+|+++. ++..-=..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999875433567899999999999995 653222234554 479999999975 66332245778999
Q ss_pred cceeeccccc
Q 006178 144 LVKINLQSNG 153 (658)
Q Consensus 144 L~~L~Ls~N~ 153 (658)
|+.|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999999985
No 430
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.92 E-value=0.0044 Score=64.07 Aligned_cols=139 Identities=13% Similarity=0.065 Sum_probs=81.1
Q ss_pred ccccCCCCeeEEEEEecC--------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCc
Q 006178 364 NIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFT 434 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~ 434 (658)
+.|..|-...+|+....+ ++.+++|+- ... . .......+|.++++.+. +.-..++++++. +
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~-g~~-~---~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--- 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLY-GAI-L---QGVDSLVLESVMFAILAERSLGPQLYGVFP--E--- 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEEC-C-------CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T---
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEEC-CCc-c---chHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C---
Confidence 457778888999998753 356777653 111 1 11334668999998883 433467776653 2
Q ss_pred eEEEEEecCCCChhhh-----------------hccC----CCCCC-CHHHHHHHHHHHHH-------------------
Q 006178 435 RMLVFDYASNGTLYEH-----------------LHYG----ERCQV-SWTRRMKIVIGIAR------------------- 473 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~-----------------l~~~----~~~~l-~~~~~~~i~~qia~------------------- 473 (658)
.+||||++|.+|..- ++.. .+.+. -|.++.++..++..
T Consensus 126 -g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 204 (379)
T 3feg_A 126 -GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKD 204 (379)
T ss_dssp -EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHH
T ss_pred -ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHH
Confidence 389999988655311 1111 11111 24566666655432
Q ss_pred HHHHhhhc-----CCCCeeeccCCCcceeecCC----CCceeccccchh
Q 006178 474 GLKYLHTE-----LGPPFTISELNSSAVYLTED----FSPKLVDFDSWK 513 (658)
Q Consensus 474 gL~yLH~~-----~~~~ivHrDlkp~NILl~~~----~~~kl~DFGla~ 513 (658)
.++.|.+. ....++|+|+.+.||+++++ +.+.|+||..|.
T Consensus 205 ~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 205 EMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 23333321 12379999999999999876 689999998653
No 431
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.82 E-value=0.0064 Score=64.56 Aligned_cols=73 Identities=12% Similarity=0.094 Sum_probs=45.3
Q ss_pred ccccCCCCeeEEEEEecC-CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCCc-cceeeEEecCCCCceEEEEEe
Q 006178 364 NIIGSSPDSLVYKGTMKG-GPEIAVISLCIKEEHWTGYLELYFQREVADLARINHENT-GKLLGYCRESSPFTRMLVFDY 441 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~-~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~~~lv~E~ 441 (658)
+.|+.|-...+|++...+ +..+++|........ .. .-.+|..+++.+...++ .++++++. + .+||||
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~---~i--dR~~E~~vl~~L~~~gl~P~ll~~~~--~----G~v~e~ 182 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE---II--NREREKKISCILYNKNIAKKIYVFFT--N----GRIEEF 182 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCS---CS--CHHHHHHHHHHHTTSSSBCCEEEEET--T----EEEEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhh---hc--CHHHHHHHHHHHHhcCCCCCEEEEeC--C----eEEEEe
Confidence 568888899999999875 456666654221111 00 11478999998854444 57777662 2 369999
Q ss_pred cCCCCh
Q 006178 442 ASNGTL 447 (658)
Q Consensus 442 ~~~gsL 447 (658)
+++.+|
T Consensus 183 I~G~~l 188 (458)
T 2qg7_A 183 MDGYAL 188 (458)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 987554
No 432
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.81 E-value=0.0043 Score=57.71 Aligned_cols=103 Identities=9% Similarity=-0.013 Sum_probs=65.9
Q ss_pred CChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccchhhhhhcCCCCCC
Q 006178 445 GTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSWKTILARSEKNPG 524 (658)
Q Consensus 445 gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 524 (658)
-+|.++|...+. ++++++++.++.|.+.+|.-+-.+..+. .+=+-|..|++..+|.+...+ +.+.
T Consensus 33 vSL~eIL~~~~~-PlsEEqaWALc~Qc~~~L~~~~~~~~~~--~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 33 LSLEEILRLYNQ-PINEEQAWAVCYQCCGSLRAAARRRQPR--HRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHTTCCC--CCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred ccHHHHHHHcCC-CcCHHHHHHHHHHHHHHHHhhhhcccCC--ceecCCcceEEecCCceeccc-cccc-----------
Confidence 378898875544 7999999999999999987762211111 222346889999999887764 2110
Q ss_pred cccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCC
Q 006178 525 TLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPP 566 (658)
Q Consensus 525 ~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p 566 (658)
.....+-+||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 ---~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ---AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ---ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0112244577653 3456788899999999998874444
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.78 E-value=0.0021 Score=55.39 Aligned_cols=56 Identities=29% Similarity=0.420 Sum_probs=28.6
Q ss_pred EEEccCCcCC-CCCcccccCCcccceeecccccCCCCChhhhcCCCCCCEEeCCCCCCc
Q 006178 122 ILDLGTNQLT-GPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISLEELHLDRNRLQ 179 (658)
Q Consensus 122 ~L~Ls~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 179 (658)
.+|.+++.|+ ..+|..+. ++|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4445555443 23343221 23555555555555433444556666666666666553
No 434
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.72 E-value=0.0023 Score=55.22 Aligned_cols=56 Identities=29% Similarity=0.387 Sum_probs=33.1
Q ss_pred EEEecCCCCc-ccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCC
Q 006178 74 KINISGSSLK-GFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLT 131 (658)
Q Consensus 74 ~l~L~~n~l~-g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 131 (658)
.++.++++|+ ..+|..+ -.+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4666677775 2345332 235666666666666555555666666666666666553
No 435
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.70 E-value=0.0029 Score=65.47 Aligned_cols=73 Identities=11% Similarity=0.043 Sum_probs=41.7
Q ss_pred ccccCCCCeeEEEEEecCC---------CeEEEEEEeeeccccchhhHHHHHHHHHHHHhccCCC-ccceeeEEecCCCC
Q 006178 364 NIIGSSPDSLVYKGTMKGG---------PEIAVISLCIKEEHWTGYLELYFQREVADLARINHEN-TGKLLGYCRESSPF 433 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~~---------~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~n-Iv~l~~~~~~~~~~ 433 (658)
+.|+.|....+|+....++ +.+++|....... .. .....|.++++.+...+ +.++++.. .+
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~----~~-~~~~~E~~~l~~L~~~g~~P~~~~~~--~~-- 109 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD----EL-YNTISEFEVYKTMSKYKIAPQLLNTF--NG-- 109 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG----GT-SCHHHHHHHHHHHHHTTSSCCEEEEE--TT--
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc----ce-ecHHHHHHHHHHHHhcCCCCceEEec--CC--
Confidence 4677888889999987542 5666665321111 10 12357888888884333 45676544 22
Q ss_pred ceEEEEEecCCCCh
Q 006178 434 TRMLVFDYASNGTL 447 (658)
Q Consensus 434 ~~~lv~E~~~~gsL 447 (658)
++||||++|.++
T Consensus 110 --~~v~e~i~G~~l 121 (369)
T 3c5i_A 110 --GRIEEWLYGDPL 121 (369)
T ss_dssp --EEEEECCCSEEC
T ss_pred --cEEEEEecCCcC
Confidence 689999987544
No 436
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.66 E-value=0.0095 Score=60.70 Aligned_cols=30 Identities=17% Similarity=0.207 Sum_probs=26.5
Q ss_pred CCeeeccCCCcceeecCCCCceeccccchh
Q 006178 484 PPFTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 484 ~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
..++|+|+.+.||++++++.+.|+||+.+.
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~ 235 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPM 235 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCe
Confidence 479999999999999988889999997554
No 437
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.37 E-value=0.0095 Score=62.10 Aligned_cols=110 Identities=13% Similarity=0.185 Sum_probs=58.0
Q ss_pred cccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCCCC
Q 006178 89 ELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLISL 168 (658)
Q Consensus 89 ~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 168 (658)
.|.++..|+.+.+..+... .-...|.++++|+.+++. +.++..-...|.++.+|+.++|..| ++..-..+|.++++|
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L 336 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQL 336 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCC
Confidence 3445566666666543322 334455666666666664 3343222344556666666666543 332233456666666
Q ss_pred CEEeCCCCCCcccCCCCCCCCccccccccccCCCCcccccCCCCCcEEEccCCcC
Q 006178 169 EELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANLTGLCHLSQLKVADFSYNFF 223 (658)
Q Consensus 169 ~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l~~~~~l~~L~~l~ls~N~l 223 (658)
+.+.|..+ ++ .|.. ..|.++.+|+.+++.+|..
T Consensus 337 ~~i~ip~s-v~-~I~~--------------------~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 337 ERIAIPSS-VT-KIPE--------------------SAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp CEEEECTT-CC-BCCG--------------------GGGTTCTTCCEEEESSCHH
T ss_pred CEEEECcc-cC-EEhH--------------------hHhhCCCCCCEEEECCcee
Confidence 66665433 22 2221 2356677788888777653
No 438
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.09 E-value=0.0011 Score=61.25 Aligned_cols=110 Identities=12% Similarity=0.119 Sum_probs=69.5
Q ss_pred CCCEEEEEecCC-CCcc----cCCccccCCCCCcEEeccCCccccc----CCcccCCCCCCCEEEccCCcCCCC----Cc
Q 006178 69 RDRVLKINISGS-SLKG----FLAPELGLLTYLQELILHGNNLIGI----IPKELGLLKRLKILDLGTNQLTGP----IP 135 (658)
Q Consensus 69 ~~~v~~l~L~~n-~l~g----~~~~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p 135 (658)
...++.|+|++| .+.. .+...+..-+.|+.|+|++|.+... +-..+..-+.|+.|+|+.|+|... +-
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 346788888875 6642 2344556667888888888888632 223344456788888888888632 11
Q ss_pred ccccCCcccceeeccccc---CCC----CChhhhcCCCCCCEEeCCCCCC
Q 006178 136 PEIGNLTGLVKINLQSNG---LTG----RLPAELGNLISLEELHLDRNRL 178 (658)
Q Consensus 136 ~~~~~l~~L~~L~Ls~N~---l~g----~~p~~~~~l~~L~~L~L~~N~l 178 (658)
..+..-+.|+.|+|++|. +.. .+-..+..-+.|+.|+++.|..
T Consensus 120 ~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 234445668888887653 221 1233455557888888877654
No 439
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.07 E-value=0.016 Score=59.94 Aligned_cols=109 Identities=16% Similarity=0.141 Sum_probs=70.0
Q ss_pred EEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeeccc
Q 006178 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (658)
Q Consensus 72 v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (658)
+..+.+..+ +...-...+.++..|+.+.+..+ ++..-...|.++.+|+.+++..+ +...-...|.++++|+.+.+.+
T Consensus 219 l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~ 295 (379)
T 4h09_A 219 LKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDN 295 (379)
T ss_dssp CSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECC
T ss_pred cceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccc
Confidence 444554332 33333445677788888888655 55455566777888888888654 4423334677788888888887
Q ss_pred ccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCC
Q 006178 152 NGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185 (658)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 185 (658)
+.++..-...|.++.+|+.+.|..+ ++ .|+..
T Consensus 296 ~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~ 327 (379)
T 4h09_A 296 SAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVY 327 (379)
T ss_dssp TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTT
T ss_pred cccceehhhhhcCCCCCCEEEcCcc-cc-EEHHH
Confidence 7777444567788888888888654 44 45443
No 440
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.90 E-value=0.03 Score=57.84 Aligned_cols=94 Identities=13% Similarity=0.102 Sum_probs=71.0
Q ss_pred CccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecccccCCCCChhhhcCCC
Q 006178 87 APELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQSNGLTGRLPAELGNLI 166 (658)
Q Consensus 87 ~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 166 (658)
...+.....|+.+.+..+ +...-...|.++..|+.+.+..+ ++..-...+.++.+|+.+.+..+ ++..-...|.+++
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~ 286 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCS 286 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCT
T ss_pred ecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccc
Confidence 345667888999988755 44455667889999999999876 55344567888999999999755 5534445788999
Q ss_pred CCCEEeCCCCCCcccCCC
Q 006178 167 SLEELHLDRNRLQGAVPA 184 (658)
Q Consensus 167 ~L~~L~L~~N~l~g~~p~ 184 (658)
+|+.+.+.++.++ .|+.
T Consensus 287 ~L~~i~l~~~~i~-~I~~ 303 (379)
T 4h09_A 287 NLTKVVMDNSAIE-TLEP 303 (379)
T ss_dssp TCCEEEECCTTCC-EECT
T ss_pred ccccccccccccc-eehh
Confidence 9999999988887 5554
No 441
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.88 E-value=0.018 Score=59.96 Aligned_cols=103 Identities=14% Similarity=0.170 Sum_probs=76.1
Q ss_pred EEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeeccc
Q 006178 72 VLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQS 151 (658)
Q Consensus 72 v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 151 (658)
++.+.+..+-. ..-...|.+++.|+.+.+. +.+...-...|.++.+|+.++|..| ++..-...|.++.+|+.+.|..
T Consensus 267 L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~ 343 (394)
T 4gt6_A 267 LASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPS 343 (394)
T ss_dssp CCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECT
T ss_pred ccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECc
Confidence 44555543322 2223467789999999996 5566556678999999999999865 5533356789999999999976
Q ss_pred ccCCCCChhhhcCCCCCCEEeCCCCCC
Q 006178 152 NGLTGRLPAELGNLISLEELHLDRNRL 178 (658)
Q Consensus 152 N~l~g~~p~~~~~l~~L~~L~L~~N~l 178 (658)
+ ++..-..+|.++++|+.+++.+|..
T Consensus 344 s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 344 S-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp T-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred c-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 5 6644467899999999999988754
No 442
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.60 E-value=0.0051 Score=56.84 Aligned_cols=89 Identities=19% Similarity=0.104 Sum_probs=62.4
Q ss_pred cccCCCCCcEEeccCC-cccc----cCCcccCCCCCCCEEEccCCcCCC----CCcccccCCcccceeecccccCCCC--
Q 006178 89 ELGLLTYLQELILHGN-NLIG----IIPKELGLLKRLKILDLGTNQLTG----PIPPEIGNLTGLVKINLQSNGLTGR-- 157 (658)
Q Consensus 89 ~~~~l~~L~~L~L~~N-~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~-- 157 (658)
.+.+-+.|++|+|++| .+.. .+-..+..-+.|+.|+|++|+|.. .+-..+..-+.|+.|+|+.|.|...
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3455678999999986 6642 133456666899999999999862 2223344557899999999999742
Q ss_pred --ChhhhcCCCCCCEEeCCCCC
Q 006178 158 --LPAELGNLISLEELHLDRNR 177 (658)
Q Consensus 158 --~p~~~~~l~~L~~L~L~~N~ 177 (658)
+-..+..-+.|++|+|++|.
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQR 137 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCS
T ss_pred HHHHHHHhhCCceeEEECCCCc
Confidence 22334555679999998653
No 443
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.56 E-value=0.044 Score=56.83 Aligned_cols=143 Identities=12% Similarity=0.062 Sum_probs=80.0
Q ss_pred ccccCCCCeeEEEEEecC--------CCeEEEEEEeeeccc----------cchh----hHHHHHHHHHHHHhc-cCCCc
Q 006178 364 NIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEH----------WTGY----LELYFQREVADLARI-NHENT 420 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~----------~~~~----~~~~~~~E~~~l~~l-~H~nI 420 (658)
+.|..|-...+|++..++ .+.++++..-..... .+.. ..+....|..+++.+ .+.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456668888999988764 245655543221110 0000 011234588898888 45556
Q ss_pred cceeeEEecCCCCceEEEEEecCCCChhh--h---------------hccC----CCCCC-CHHHHHHHHHHHH------
Q 006178 421 GKLLGYCRESSPFTRMLVFDYASNGTLYE--H---------------LHYG----ERCQV-SWTRRMKIVIGIA------ 472 (658)
Q Consensus 421 v~l~~~~~~~~~~~~~lv~E~~~~gsL~~--~---------------l~~~----~~~~l-~~~~~~~i~~qia------ 472 (658)
.++++++. + .+|+||+++-+|.. + +|.. .+.+. -|....++..++.
T Consensus 138 Pkl~~~~~--~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~ 211 (401)
T 3f2s_A 138 PKLYGIFP--Q----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTE 211 (401)
T ss_dssp CCEEEEET--T----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCS
T ss_pred CeEEEEeC--C----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcc
Confidence 67777763 2 38999998755421 1 1111 11111 2334444544332
Q ss_pred ----------------HHHHH----hhhc-CCCCeeeccCCCcceeecCC------CCceeccccch
Q 006178 473 ----------------RGLKY----LHTE-LGPPFTISELNSSAVYLTED------FSPKLVDFDSW 512 (658)
Q Consensus 473 ----------------~gL~y----LH~~-~~~~ivHrDlkp~NILl~~~------~~~kl~DFGla 512 (658)
.-+.. |... ....++|+|+.+.||+++++ +.+.++||..|
T Consensus 212 ~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a 278 (401)
T 3f2s_A 212 ESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYS 278 (401)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTC
T ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccC
Confidence 11222 2221 22378999999999999887 78999999754
No 444
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.52 E-value=0.07 Score=55.83 Aligned_cols=138 Identities=9% Similarity=0.094 Sum_probs=81.5
Q ss_pred ccccCCCCeeEEEEEecC--------CCeEEEEEEeeeccccchhhHHHHHHHHHHHHhcc-CCCccceeeEEecCCCCc
Q 006178 364 NIIGSSPDSLVYKGTMKG--------GPEIAVISLCIKEEHWTGYLELYFQREVADLARIN-HENTGKLLGYCRESSPFT 434 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~--------~~~vavk~~~~~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~ 434 (658)
+.+..|-...+|+....+ ++.++++..-..... . -+-.+|..+++.+. +.-..++++.+ .+
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~----~-idR~~E~~~l~~L~~~gi~P~l~~~~--~~--- 145 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK----F-YDSKVELDVFRYLSNINIAPNIIADF--PE--- 145 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C----C-CCHHHHHHHHHHHHHTTSSCCEEEEE--TT---
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch----h-cCHHHHHHHHHHHHhcCCCCCEEEEc--CC---
Confidence 457778888999998763 466777664221111 0 01247888888884 33345666533 22
Q ss_pred eEEEEEecCCCChhh--h---------------hcc----C-------CCCCCCHHHHHHHHHHHH--------------
Q 006178 435 RMLVFDYASNGTLYE--H---------------LHY----G-------ERCQVSWTRRMKIVIGIA-------------- 472 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~--~---------------l~~----~-------~~~~l~~~~~~~i~~qia-------------- 472 (658)
++||||++|..|.. + +|. . .+.+.-|.++.++..++-
T Consensus 146 -~~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 224 (424)
T 3mes_A 146 -GRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKEL 224 (424)
T ss_dssp -EEEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHH
T ss_pred -CEEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhcccc
Confidence 78999999865421 0 010 0 111223555444443321
Q ss_pred -----HHHHHhhhc---------------------CCCCeeeccCCCcceeecCCCCceeccccchh
Q 006178 473 -----RGLKYLHTE---------------------LGPPFTISELNSSAVYLTEDFSPKLVDFDSWK 513 (658)
Q Consensus 473 -----~gL~yLH~~---------------------~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~ 513 (658)
..+++|.+. ....++|+|+.+.||+ ++++.+.++||..|.
T Consensus 225 ~~~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~ 290 (424)
T 3mes_A 225 YSKILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSA 290 (424)
T ss_dssp HHHHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCC
Confidence 223333211 1236899999999999 788899999998654
No 445
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.28 E-value=0.059 Score=55.96 Aligned_cols=141 Identities=16% Similarity=0.092 Sum_probs=76.7
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
.++.+.+... ++..-...+..+..|+.+.+..+... .-...|..+..|+.+.+..+.+. ...+..+.+|+.+.+.
T Consensus 231 ~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~ 305 (394)
T 4fs7_A 231 GVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLL 305 (394)
T ss_dssp CCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEEC
T ss_pred CCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccc
Confidence 3455555432 22222345667777888887766443 44455666777777766655432 2345566666666665
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCCCCCCccccccccccCCCCc-----ccccCCCCCcEEEccCC
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAGSNSGYTANIHGMYASSANL-----TGLCHLSQLKVADFSYN 221 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~~~l~~~~l~~n~l-----~~~~~l~~L~~l~ls~N 221 (658)
.+ ++..-...|.++++|+.++|..+ ++ .|+...+.+. .+|..+.+..+ + ..+.++.+|+.+++..|
T Consensus 306 ~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c-~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 306 DS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGC-TSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTC-TTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred cc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCC-CCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 44 44233445666667777766543 33 4444322211 23333333332 2 23667888999988655
No 446
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=94.40 E-value=0.04 Score=57.30 Aligned_cols=107 Identities=16% Similarity=0.062 Sum_probs=63.6
Q ss_pred CEEEEEecCCCCcccCCccccCCCCCcEEeccCCcccccCCcccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 71 RVLKINISGSSLKGFLAPELGLLTYLQELILHGNNLIGIIPKELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 71 ~v~~l~L~~n~l~g~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
.++.+.+..+.. ..-...+..+..|+.+.+..+.+ ....|..+.+|+.+.+..+ ++..-...|.++++|+.++|.
T Consensus 254 ~l~~~~~~~~~~-~i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp 328 (394)
T 4fs7_A 254 DLESISIQNNKL-RIGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLP 328 (394)
T ss_dssp SCCEEEECCTTC-EECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCC
T ss_pred cceeEEcCCCcc-eeeccccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeC
Confidence 455666655433 23344566677777777665542 2245667777777777654 442334556777777777776
Q ss_pred cccCCCCChhhhcCCCCCCEEeCCCCCCcccCCCC
Q 006178 151 SNGLTGRLPAELGNLISLEELHLDRNRLQGAVPAG 185 (658)
Q Consensus 151 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 185 (658)
++ ++..-..+|.++++|+.+.+..| ++ .|+..
T Consensus 329 ~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~ 360 (394)
T 4fs7_A 329 YL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGAN 360 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTT
T ss_pred Cc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHH
Confidence 43 55333456777777777777665 44 45543
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.33 E-value=0.22 Score=51.77 Aligned_cols=29 Identities=21% Similarity=0.329 Sum_probs=23.6
Q ss_pred CeeeccCCCcceee------cCCCCceeccccchh
Q 006178 485 PFTISELNSSAVYL------TEDFSPKLVDFDSWK 513 (658)
Q Consensus 485 ~ivHrDlkp~NILl------~~~~~~kl~DFGla~ 513 (658)
.++|+|+.+.|||+ +++..++++||..|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 36799999999999 345678999997654
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=91.71 E-value=0.62 Score=43.21 Aligned_cols=116 Identities=8% Similarity=0.019 Sum_probs=76.2
Q ss_pred cCCCccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeeccCCCcc
Q 006178 416 NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLKYLHTELGPPFTISELNSSA 495 (658)
Q Consensus 416 ~H~nIv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivHrDlkp~N 495 (658)
.||+.+.. .+-.+.+ ...+.|+.-+ +...+-.- ..++...+++++.+|+...++++.. +|--+.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD--~v~~~y~~~~--~~~~f~~i---k~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRD--SFQIHYDIND--NHTPFDNI---KSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSS--EEEEEECCCT--TSEEGGGG---GGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEccc--EEEEEEEcCc--ccCCHHHH---HhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 68888866 4555554 4444454433 23322211 1378899999999999988777654 688899999
Q ss_pred eeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCCC
Q 006178 496 VYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPCC 568 (658)
Q Consensus 496 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~~ 568 (658)
|++|.++.+++.-.|+-..+ +|. ..+...=.-.+=+++..+++++..|.
T Consensus 110 L~f~~~~~p~i~~RGik~~l-------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVV-------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTTB-------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccCC-------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999988853221 121 11111123356778889999998873
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=86.58 E-value=1.9 Score=40.06 Aligned_cols=114 Identities=10% Similarity=0.105 Sum_probs=73.7
Q ss_pred cCCCccceeeEEecCCCCceEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHHHHHHH-HhhhcCCCCeeeccCCCc
Q 006178 416 NHENTGKLLGYCRESSPFTRMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGIARGLK-YLHTELGPPFTISELNSS 494 (658)
Q Consensus 416 ~H~nIv~l~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qia~gL~-yLH~~~~~~ivHrDlkp~ 494 (658)
.||++ -..+-.+.+ ...+.++.-+++.=...++ .++..++++++.+|+.... +++.. +|--+.|+
T Consensus 48 ~~~~f--~~~I~~~eD--~~~i~y~~~~~~~~f~~i~-----~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSED--EVKVVIKPPSSFLTFAAIR-----KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSS--EEEEEEECCTTCEEHHHHH-----TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGG
T ss_pred cCCCC--CeEEEEeCC--EEEEEEEcCcccCcHHHHH-----hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCc
Confidence 67877 333344444 4555555543332223333 3788999999999998877 66654 67788999
Q ss_pred ceeecCCCCceeccccchhhhhhcCCCCCCcccccCccccCCcccccCCCCccccchhhHHHHHHHHhCCCCC
Q 006178 495 AVYLTEDFSPKLVDFDSWKTILARSEKNPGTLGSQGAICILPSSLEARHLDVQGNIYAFGVLLLEIISGRPPC 567 (658)
Q Consensus 495 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVwS~Gvvl~elltG~~p~ 567 (658)
||++|.++.+++.-.|+-..+ +|..+ ++.-=.-.+=+++..++.++..|
T Consensus 114 NL~f~~~~~p~i~hRGi~~~l-------------------pP~e~-----~ee~fl~qyKali~all~~K~~F 162 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKESL-------------------PPDEW-----DDERLLREVKATVLALTEGEYRF 162 (219)
T ss_dssp GEEECTTCCEEESCCEETTTB-------------------SSCSC-----CHHHHHHHHHHHHHHHTTCSSCH
T ss_pred eEEEeCCCcEEEEEcCCcccC-------------------CCCCC-----CHHHHHHHHHHHHHHHHcCCCCH
Confidence 999999999999988853221 12211 11111234667888888888776
No 450
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=85.89 E-value=0.14 Score=34.00 Aligned_cols=28 Identities=7% Similarity=-0.001 Sum_probs=13.5
Q ss_pred eeeeeeechhhhHHHHHhhhheeeeccC
Q 006178 292 LTLEIVTGTMVGVLFLVAGFTGLQRCKS 319 (658)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (658)
+++++++|+++++++++++++++|+++.
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 4434555555444444444555554443
No 451
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=83.70 E-value=0.17 Score=33.57 Aligned_cols=28 Identities=11% Similarity=0.102 Sum_probs=13.5
Q ss_pred eeeeeeechhhhHHHHHhhhheeeeccC
Q 006178 292 LTLEIVTGTMVGVLFLVAGFTGLQRCKS 319 (658)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (658)
++.++++|+++++++++++++++|+++.
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhh
Confidence 4444555555444444444555554443
No 452
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=81.34 E-value=0.21 Score=52.99 Aligned_cols=61 Identities=7% Similarity=-0.106 Sum_probs=17.2
Q ss_pred ccccCCCCeeEEEEEecC-CCeEEE------EEEeeeccccchhhHHHHHHHHHHHHhccCCCccceeeEEec
Q 006178 364 NIIGSSPDSLVYKGTMKG-GPEIAV------ISLCIKEEHWTGYLELYFQREVADLARINHENTGKLLGYCRE 429 (658)
Q Consensus 364 ~~lG~G~~g~Vy~~~~~~-~~~vav------k~~~~~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 429 (658)
+.|| ||.||+|.+.. ..+||| |+..... ........|.+|..+++.++|||+++.+++...
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~--~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDG--VSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-------------------------------------CBCCCEEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCcccccccc--ccccccccccccccccccccccccCCCcceEEe
Confidence 5666 99999999864 357787 5543221 122233468889999999999999999987653
No 453
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=60.58 E-value=1.6 Score=27.98 Aligned_cols=13 Identities=23% Similarity=0.652 Sum_probs=6.1
Q ss_pred eeeechhhhHHHH
Q 006178 295 EIVTGTMVGVLFL 307 (658)
Q Consensus 295 ~~~~~~~~~~~~~ 307 (658)
++++|++++++++
T Consensus 15 GiVvG~v~gv~li 27 (38)
T 2k1k_A 15 AVIFGLLLGAALL 27 (38)
T ss_dssp HHHHHHHHHHHHH
T ss_pred eeehHHHHHHHHH
Confidence 4555555444433
No 454
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=53.11 E-value=1.9 Score=28.44 Aligned_cols=23 Identities=22% Similarity=0.134 Sum_probs=9.3
Q ss_pred eeechhhhHHHHHhhhheeeecc
Q 006178 296 IVTGTMVGVLFLVAGFTGLQRCK 318 (658)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~ 318 (658)
.++|++++++++++++++.||++
T Consensus 17 ~vVGvll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 17 AVVGILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhheehhh
Confidence 34444333333333344444443
No 455
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=49.76 E-value=3 Score=27.10 Aligned_cols=7 Identities=14% Similarity=0.506 Sum_probs=2.6
Q ss_pred eeeechh
Q 006178 295 EIVTGTM 301 (658)
Q Consensus 295 ~~~~~~~ 301 (658)
++++|++
T Consensus 18 ~vv~Gv~ 24 (41)
T 2k9y_A 18 GVAVGVV 24 (41)
T ss_dssp HHHHHHH
T ss_pred ehhHHHH
Confidence 3333333
No 456
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=23.74 E-value=2.8e+02 Score=27.31 Aligned_cols=75 Identities=13% Similarity=0.091 Sum_probs=40.5
Q ss_pred eEEEEEecCCCChhhhhccCCCCCCCHHHHHHHHHHH--HHHHHHhhhcCCC-Ceee-ccCCCcceeecCCCC-ceeccc
Q 006178 435 RMLVFDYASNGTLYEHLHYGERCQVSWTRRMKIVIGI--ARGLKYLHTELGP-PFTI-SELNSSAVYLTEDFS-PKLVDF 509 (658)
Q Consensus 435 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi--a~gL~yLH~~~~~-~ivH-rDlkp~NILl~~~~~-~kl~DF 509 (658)
.+++|||.+|..|.+.-...-...+..+. +.++ .-+++.+..+... +.+. .--.++|||++++.. +.++|-
T Consensus 157 ~~l~meyv~G~~L~e~~~~~~~~~f~~~~----~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~IDh 232 (342)
T 1cja_A 157 NILLMELVRGITLNKLTTTSAPEVLTKST----MQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPIDS 232 (342)
T ss_dssp EEEEEECCCEEESTTCCSSSHHHHSCHHH----HHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECSC
T ss_pred ceehhhhcCCCccccchhhhhhhhcCHHH----HHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEcC
Confidence 46999999876665432211001122222 2322 2345555544321 2221 225789999987654 778898
Q ss_pred cchh
Q 006178 510 DSWK 513 (658)
Q Consensus 510 Gla~ 513 (658)
+.+.
T Consensus 233 n~af 236 (342)
T 1cja_A 233 KIIP 236 (342)
T ss_dssp CCCC
T ss_pred Cccc
Confidence 8764
No 457
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=22.86 E-value=3.3e+02 Score=31.54 Aligned_cols=47 Identities=11% Similarity=0.089 Sum_probs=31.9
Q ss_pred CCHHH-HHHHHHHHHH--HHHHhhhcCCCCeeeccCCCcceeecCCCCceeccccch
Q 006178 459 VSWTR-RMKIVIGIAR--GLKYLHTELGPPFTISELNSSAVYLTEDFSPKLVDFDSW 512 (658)
Q Consensus 459 l~~~~-~~~i~~qia~--gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla 512 (658)
..|.. +..++..+|- -+.|+=.- +|=.++|||+|.+|++.=+|||.+
T Consensus 911 ~~~~~ar~nF~~S~A~ysvv~YiLgi-------gDRH~~NILid~tG~v~HIDFG~~ 960 (1091)
T 3hhm_A 911 EIYDAAIDLFTRSCAGYCVATFILGI-------GDRHNSNIMVKDDGQLFHIDFGHF 960 (1091)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTTEEEETTSCEEECCCCCC
T ss_pred HHHHHHHHHHHHHhhhhhheEEEEee-------cCCCCcceEEeCCCCEEEEeehhh
Confidence 44554 3455555442 34444322 577899999999999999999976
No 458
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=22.62 E-value=1.5e+02 Score=23.24 Aligned_cols=38 Identities=13% Similarity=0.032 Sum_probs=18.7
Q ss_pred cccCCCCCCCEEEccCCcCCCCCcccccCCcccceeecc
Q 006178 112 KELGLLKRLKILDLGTNQLTGPIPPEIGNLTGLVKINLQ 150 (658)
Q Consensus 112 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 150 (658)
..|.++++|+.+.|..+ ++..-...|.++.+|+.+.+.
T Consensus 14 ~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 14 SLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp CTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred HHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 44555555555555443 232223345555555555554
Done!