Query 006185
Match_columns 657
No_of_seqs 400 out of 3454
Neff 10.4
Searched_HMMs 13730
Date Mon Mar 25 18:17:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006185.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/006185hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2omza2 c.10.2.1 (A:33-416) In 99.9 4.9E-21 3.5E-25 195.7 24.4 198 7-224 34-251 (384)
2 d2omza2 c.10.2.1 (A:33-416) In 99.8 1.2E-19 8.9E-24 185.1 25.2 311 3-385 52-382 (384)
3 d1p9ag_ c.10.2.7 (G:) von Will 99.8 8.6E-19 6.3E-23 168.3 18.7 197 15-225 8-206 (266)
4 d1xkua_ c.10.2.7 (A:) Decorin 99.8 7.9E-18 5.8E-22 165.4 23.9 189 18-223 11-204 (305)
5 d1p9ag_ c.10.2.7 (G:) von Will 99.8 3.1E-18 2.2E-22 164.4 18.1 184 4-204 19-207 (266)
6 d1xkua_ c.10.2.7 (A:) Decorin 99.8 4.4E-17 3.2E-21 160.0 23.4 168 40-223 11-180 (305)
7 d2omxa2 c.10.2.1 (A:37-235) In 99.7 1.7E-17 1.3E-21 151.3 16.8 154 8-169 31-184 (199)
8 d1ozna_ c.10.2.7 (A:) Reticulo 99.7 3.4E-17 2.5E-21 158.8 19.9 208 4-224 20-235 (284)
9 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 3E-17 2.2E-21 153.5 18.4 198 5-223 29-226 (227)
10 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 2.4E-17 1.7E-21 151.7 16.0 145 16-168 45-189 (210)
11 d1jl5a_ c.10.2.6 (A:) Leucine 99.7 7.7E-16 5.6E-20 154.5 28.6 177 17-224 38-214 (353)
12 d1ogqa_ c.10.2.8 (A:) Polygala 99.7 4.4E-17 3.2E-21 160.6 15.3 127 40-168 51-185 (313)
13 d2omxa2 c.10.2.1 (A:37-235) In 99.7 1.4E-16 1E-20 145.2 15.8 181 18-219 19-199 (199)
14 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 1.6E-16 1.2E-20 146.0 16.4 156 3-166 54-209 (210)
15 d1ogqa_ c.10.2.8 (A:) Polygala 99.7 1.2E-17 8.8E-22 164.7 9.0 246 17-284 50-307 (313)
16 d1ozna_ c.10.2.7 (A:) Reticulo 99.7 4.8E-16 3.5E-20 150.6 18.4 192 20-224 14-211 (284)
17 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 1.3E-15 9.2E-20 142.2 19.6 178 3-201 49-226 (227)
18 d1jl5a_ c.10.2.6 (A:) Leucine 99.7 8.8E-15 6.4E-19 146.6 25.7 188 4-224 47-234 (353)
19 d2astb2 c.10.1.3 (B:2136-2419) 99.5 7.1E-15 5.1E-19 141.7 9.4 124 42-167 3-131 (284)
20 d1dcea3 c.10.2.2 (A:444-567) R 99.5 5.2E-14 3.8E-18 116.3 12.5 117 42-162 1-122 (124)
21 d2astb2 c.10.1.3 (B:2136-2419) 99.5 3.5E-15 2.5E-19 143.9 3.7 190 292-528 44-235 (284)
22 d1a9na_ c.10.2.4 (A:) Spliceso 99.5 1.2E-14 8.8E-19 126.6 6.8 124 37-163 16-145 (162)
23 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.5 2.7E-13 2E-17 127.5 14.6 191 20-224 11-211 (242)
24 d1a9na_ c.10.2.4 (A:) Spliceso 99.5 3.5E-14 2.6E-18 123.5 7.1 127 10-138 11-145 (162)
25 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.4 8.6E-14 6.3E-18 125.6 9.7 133 11-145 3-139 (192)
26 d1dcea3 c.10.2.2 (A:444-567) R 99.4 1.6E-13 1.2E-17 113.2 10.5 116 20-137 1-122 (124)
27 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.4 3.3E-13 2.4E-17 126.9 13.9 200 4-219 17-227 (242)
28 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.3 2.1E-12 1.5E-16 116.3 11.8 125 41-169 10-138 (192)
29 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 5.9E-14 4.3E-18 126.7 -5.9 103 37-142 46-150 (198)
30 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.1 1.3E-12 9.3E-17 135.5 -2.3 384 17-420 2-437 (460)
31 d1m9la_ c.10.3.1 (A:) Outer ar 99.1 2.6E-13 1.9E-17 122.4 -7.7 111 12-124 43-155 (198)
32 d2ifga3 c.10.2.7 (A:36-191) Hi 99.1 3.7E-10 2.7E-14 96.9 11.5 110 12-121 3-115 (156)
33 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.1 5E-12 3.6E-16 131.0 -1.3 366 40-451 3-411 (460)
34 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.9 8.4E-10 6.1E-14 109.1 8.1 181 14-203 28-254 (344)
35 d2ifga3 c.10.2.7 (A:36-191) Hi 98.9 2.7E-09 2E-13 91.4 10.1 94 4-97 17-114 (156)
36 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.7 1.8E-09 1.3E-13 106.6 3.5 205 12-226 54-314 (344)
37 d1koha1 c.10.2.3 (A:201-362) m 97.9 2.1E-07 1.5E-11 79.9 -3.5 82 56-138 58-152 (162)
38 d1koha1 c.10.2.3 (A:201-362) m 97.5 9.8E-06 7.1E-10 69.1 0.9 103 13-115 38-152 (162)
39 d1pgva_ c.10.1.1 (A:) Tropomod 97.0 0.00023 1.6E-08 60.6 4.0 58 108-167 71-141 (167)
40 d1pgva_ c.10.1.1 (A:) Tropomod 97.0 0.00031 2.2E-08 59.7 4.8 83 84-167 13-110 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 96.7 0.00053 3.9E-08 58.2 4.3 18 184-201 124-141 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 96.4 0.0012 8.5E-08 56.0 4.2 84 82-167 42-142 (166)
No 1
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.87 E-value=4.9e-21 Score=195.66 Aligned_cols=198 Identities=21% Similarity=0.261 Sum_probs=138.1
Q ss_pred CCCCCCCCCCCCccEEEccCCCccccCCCCCCCCCcEEEecCCcCcCCCchhhcCCCCccEEEecCCcCCCCCccccCCC
Q 006185 7 LKDWPSINTFEDLTGISLMFNDIHEVPDGLECPKLQALFLQKNHLLVIPDPFFQGMKDLKVLDLGGIRMVSPPSSLSFLS 86 (657)
Q Consensus 7 l~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~~~~~lp~~~~~l~ 86 (657)
+.+....+.+.++++|+++++.|++++....+++|++|++++|.+.++++ |+++++|++|++++|++..++. +++++
T Consensus 34 ~~~~~~~~~l~~l~~L~l~~~~I~~l~gl~~L~nL~~L~Ls~N~l~~l~~--l~~L~~L~~L~L~~n~i~~i~~-l~~l~ 110 (384)
T d2omza2 34 VTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP-LANLT 110 (384)
T ss_dssp TTSEECHHHHTTCCEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-GTTCT
T ss_pred CCCccCHHHhCCCCEEECCCCCCCCccccccCCCCCEEeCcCCcCCCCcc--ccCCcccccccccccccccccc-ccccc
Confidence 33333445677899999999999888644488999999999999888876 7899999999999999887764 88999
Q ss_pred CCcEEEccCCCCCCCCcccCCCCCCCEEEeeCCCCCccc--------------------ccccCCCCCCEEEccCCCCCC
Q 006185 87 NLRTLRLDYCNHLPDLSLIGELSGLEILDLSKSDVNEIP--------------------VSFGRLSHLRLLDLTDCYNLE 146 (657)
Q Consensus 87 ~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~lp--------------------~~i~~l~~L~~L~l~~c~~~~ 146 (657)
+|++|+++++. .+..........+.......+.+..+. ..+.............+ ..
T Consensus 111 ~L~~L~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~- 187 (384)
T d2omza2 111 NLTGLTLFNNQ-ITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSN-KV- 187 (384)
T ss_dssp TCCEEECCSSC-CCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSS-CC-
T ss_pred ccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccccc-cc-
Confidence 99999998887 555555556666666666654433211 11222333333333332 12
Q ss_pred CCchhHhhcCccCcEEEcccCccccccccccccccccchhhhcCCCCccEEEeecCCCccCCCCCCCCCccEEEEEEc
Q 006185 147 LIPPGVLSRLRKLEELYMSHSFCHWQFESEEDTRSNAKFIELGALSRLTSLHIDIPKGEIMPSDMSLPNLTSFSITIG 224 (657)
Q Consensus 147 ~~~~~~~~~l~~L~~L~l~~~~~~~~~~g~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~L~~L~l~~~ 224 (657)
..... ...+++++.++++++.+. ........++|+.|++.++.+..++....+++|+.+++.++
T Consensus 188 ~~~~~-~~~l~~~~~l~l~~n~i~-------------~~~~~~~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n 251 (384)
T d2omza2 188 SDISV-LAKLTNLESLIATNNQIS-------------DITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANN 251 (384)
T ss_dssp CCCGG-GGGCTTCSEEECCSSCCC-------------CCGGGGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSS
T ss_pred ccccc-cccccccceeeccCCccC-------------CCCcccccCCCCEEECCCCCCCCcchhhcccccchhccccC
Confidence 22222 678889999998887553 12335667889999999988877766667788888887755
No 2
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.84 E-value=1.2e-19 Score=185.10 Aligned_cols=311 Identities=21% Similarity=0.290 Sum_probs=181.1
Q ss_pred CCCCCCCCCCCCCCCCccEEEccCCCccccCCCCCCCCCcEEEecCCcCcCCCchhhcCCCCccEEEecCCcCCCCCccc
Q 006185 3 AGVELKDWPSINTFEDLTGISLMFNDIHEVPDGLECPKLQALFLQKNHLLVIPDPFFQGMKDLKVLDLGGIRMVSPPSSL 82 (657)
Q Consensus 3 ~~~~l~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~~~~~lp~~~ 82 (657)
++.++++++.+..+++|++|++++|.++++++..++++|++|++++|.+..+++ ++++++|++|+++++.++.++..
T Consensus 52 ~~~~I~~l~gl~~L~nL~~L~Ls~N~l~~l~~l~~L~~L~~L~L~~n~i~~i~~--l~~l~~L~~L~~~~~~~~~~~~~- 128 (384)
T d2omza2 52 DRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPL- 128 (384)
T ss_dssp CSSCCCCCTTGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGGG-
T ss_pred CCCCCCCccccccCCCCCEEeCcCCcCCCCccccCCcccccccccccccccccc--ccccccccccccccccccccccc-
Confidence 456788888899999999999999999999876699999999999999988876 78999999999999988765443
Q ss_pred cCCCCCcEEEccCCCC--------------------CCCCcccCCCCCCCEEEeeCCCCCcccccccCCCCCCEEEccCC
Q 006185 83 SFLSNLRTLRLDYCNH--------------------LPDLSLIGELSGLEILDLSKSDVNEIPVSFGRLSHLRLLDLTDC 142 (657)
Q Consensus 83 ~~l~~L~~L~l~~~~~--------------------~~~~~~~~~l~~L~~L~l~~~~i~~lp~~i~~l~~L~~L~l~~c 142 (657)
.....+..+....+.. ......+.............+... .+.....+++++.++++++
T Consensus 129 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~l~l~~n 207 (384)
T d2omza2 129 KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVS-DISVLAKLTNLESLIATNN 207 (384)
T ss_dssp TTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCC-CCGGGGGCTTCSEEECCSS
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccc-cccccccccccceeeccCC
Confidence 2333444444332220 001122223333333333333222 2233455556666666653
Q ss_pred CCCCCCchhHhhcCccCcEEEcccCccccccccccccccccchhhhcCCCCccEEEeecCCCccCCCCCCCCCccEEEEE
Q 006185 143 YNLELIPPGVLSRLRKLEELYMSHSFCHWQFESEEDTRSNAKFIELGALSRLTSLHIDIPKGEIMPSDMSLPNLTSFSIT 222 (657)
Q Consensus 143 ~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~g~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~L~~L~l~ 222 (657)
.+..++. ....++|++|++++|.+. .+..+..+++|+.|++.++.+..++....+++|+.|+++
T Consensus 208 -~i~~~~~--~~~~~~L~~L~l~~n~l~-------------~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~ 271 (384)
T d2omza2 208 -QISDITP--LGILTNLDELSLNGNQLK-------------DIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 271 (384)
T ss_dssp -CCCCCGG--GGGCTTCCEEECCSSCCC-------------CCGGGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEEECC
T ss_pred -ccCCCCc--ccccCCCCEEECCCCCCC-------------CcchhhcccccchhccccCccCCCCcccccccCCEeecc
Confidence 3334433 345556666666655432 123455556666666666655554444555566666655
Q ss_pred EcCccChhhHHHHHhhcccccCcceEEeecccchhhhHHHHHHHHccccEEEEeeccccccccccccccccccceEEEee
Q 006185 223 IGEEDTLNDFIELFLENFNKRCSRAMGLSQDMRISALHSWIKNLLLRSEILALIEVNDLENIFSNLANDDFNELMFLYIF 302 (657)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~l~~~~~~~~~~L~~L~L~~~~~l~~~~~~l~~~~~~~L~~L~l~ 302 (657)
++.-...+.+. . +..++.+.+.++ .+++.. . ...+++++.|+++
T Consensus 272 ~~~l~~~~~~~-------~-------------------------~~~l~~l~~~~n-~l~~~~-~--~~~~~~l~~L~ls 315 (384)
T d2omza2 272 ANQISNISPLA-------G-------------------------LTALTNLELNEN-QLEDIS-P--ISNLKNLTYLTLY 315 (384)
T ss_dssp SSCCCCCGGGT-------T-------------------------CTTCSEEECCSS-CCSCCG-G--GGGCTTCSEEECC
T ss_pred CcccCCCCccc-------c-------------------------cccccccccccc-cccccc-c--cchhcccCeEECC
Confidence 43211111110 0 133444444433 112111 1 1346777777777
Q ss_pred cCCCceEEeeccccccccccccccEEeccccccccccccccCCCCCCCCccEEEEecCCCcccccchhHHHhcccCcEEE
Q 006185 303 GCNEMKCLLNSLERTQRVTLRKLEWLFIRENQNFVEICHGQLPAGCLSNVKRLDVVGCGSMLKILPSHLVQSFQNLQRLM 382 (657)
Q Consensus 303 ~~~~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~p~~~~~~~~~L~~L~ 382 (657)
++ .++.++. ...+++|++|++++|. ++++ ...+.+++|++|+++++ .++++.| +..+++|++|+
T Consensus 316 ~n-~l~~l~~------l~~l~~L~~L~L~~n~-l~~l----~~l~~l~~L~~L~l~~N-~l~~l~~---l~~l~~L~~L~ 379 (384)
T d2omza2 316 FN-NISDISP------VSSLTKLQRLFFANNK-VSDV----SSLANLTNINWLSAGHN-QISDLTP---LANLTRITQLG 379 (384)
T ss_dssp SS-CCSCCGG------GGGCTTCCEEECCSSC-CCCC----GGGGGCTTCCEEECCSS-CCCBCGG---GTTCTTCSEEE
T ss_pred CC-CCCCCcc------cccCCCCCEEECCCCC-CCCC----hhHcCCCCCCEEECCCC-cCCCChh---hccCCCCCEee
Confidence 77 4444321 2347778888887773 4432 12446788888888775 5666444 24678888888
Q ss_pred Ecc
Q 006185 383 VES 385 (657)
Q Consensus 383 l~~ 385 (657)
|++
T Consensus 380 L~~ 382 (384)
T d2omza2 380 LND 382 (384)
T ss_dssp CCC
T ss_pred CCC
Confidence 765
No 3
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=8.6e-19 Score=168.31 Aligned_cols=197 Identities=20% Similarity=0.195 Sum_probs=167.1
Q ss_pred CCCCccEEEccCCCccccCCCCCCCCCcEEEecCCcCcCCCchhhcCCCCccEEEecCCcCCCCCccccCCCCCcEEEcc
Q 006185 15 TFEDLTGISLMFNDIHEVPDGLECPKLQALFLQKNHLLVIPDPFFQGMKDLKVLDLGGIRMVSPPSSLSFLSNLRTLRLD 94 (657)
Q Consensus 15 ~~~~L~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~~~~~lp~~~~~l~~L~~L~l~ 94 (657)
....+..++.++++++++|+.+. +++++|++++|.+..++...|.++++|++|++++|+++++|. ++.+++|++|+++
T Consensus 8 ~~~~~~~v~C~~~~L~~iP~~lp-~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~-~~~l~~L~~L~Ls 85 (266)
T d1p9ag_ 8 KVASHLEVNCDKRNLTALPPDLP-KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-DGTLPVLGTLDLS 85 (266)
T ss_dssp CSTTCCEEECTTSCCSSCCSCCC-TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-CSCCTTCCEEECC
T ss_pred ccCCCeEEEccCCCCCeeCcCcC-cCCCEEECcCCcCCCcCHHHhhcccccccccccccccccccc-ccccccccccccc
Confidence 34556677999999999997653 579999999999999988888999999999999999988764 5789999999999
Q ss_pred CCCCCCCCcccCCCCCCCEEEeeCCCCCcccc-cccCCCCCCEEEccCCCCCCCCchhHhhcCccCcEEEcccCcccccc
Q 006185 95 YCNHLPDLSLIGELSGLEILDLSKSDVNEIPV-SFGRLSHLRLLDLTDCYNLELIPPGVLSRLRKLEELYMSHSFCHWQF 173 (657)
Q Consensus 95 ~~~~~~~~~~~~~l~~L~~L~l~~~~i~~lp~-~i~~l~~L~~L~l~~c~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~ 173 (657)
+|.....+..+.++++|++|+++++.+..++. .+..+.++++|++.+ +.+..++...+..+++|+.+++++|.+..
T Consensus 86 ~N~l~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~-n~l~~l~~~~~~~l~~l~~l~l~~N~l~~-- 162 (266)
T d1p9ag_ 86 HNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKG-NELKTLPPGLLTPTPKLEKLSLANNNLTE-- 162 (266)
T ss_dssp SSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTT-SCCCCCCTTTTTTCTTCCEEECTTSCCSC--
T ss_pred cccccccccccccccccccccccccccceeeccccccccccccccccc-cccceeccccccccccchhcccccccccc--
Confidence 99866677889999999999999998887654 477899999999999 56778888777889999999999997653
Q ss_pred ccccccccccchhhhcCCCCccEEEeecCCCccCCCC-CCCCCccEEEEEEcC
Q 006185 174 ESEEDTRSNAKFIELGALSRLTSLHIDIPKGEIMPSD-MSLPNLTSFSITIGE 225 (657)
Q Consensus 174 ~g~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~-~~l~~L~~L~l~~~~ 225 (657)
..+..+..+++|++|++++|.+..+|.. ..+++|+.|++.+++
T Consensus 163 ---------~~~~~~~~l~~L~~L~Ls~N~L~~lp~~~~~~~~L~~L~L~~Np 206 (266)
T d1p9ag_ 163 ---------LPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNP 206 (266)
T ss_dssp ---------CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCC
T ss_pred ---------cCccccccccccceeecccCCCcccChhHCCCCCCCEEEecCCC
Confidence 3445678899999999999999988876 678899999998774
No 4
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.78 E-value=7.9e-18 Score=165.39 Aligned_cols=189 Identities=22% Similarity=0.251 Sum_probs=106.4
Q ss_pred CccEEEccCCCccccCCCCCCCCCcEEEecCCcCcCCCchhhcCCCCccEEEecCCcCCCC-CccccCCCCCcEEEccCC
Q 006185 18 DLTGISLMFNDIHEVPDGLECPKLQALFLQKNHLLVIPDPFFQGMKDLKVLDLGGIRMVSP-PSSLSFLSNLRTLRLDYC 96 (657)
Q Consensus 18 ~L~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~~~~~l-p~~~~~l~~L~~L~l~~~ 96 (657)
..++++.++..++++|..+. +++++|++++|.+..+++..|.++++|++|+++++.+..+ |..|.++++|++|++++|
T Consensus 11 ~~~~~~C~~~~L~~lP~~l~-~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n 89 (305)
T d1xkua_ 11 HLRVVQCSDLGLEKVPKDLP-PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 89 (305)
T ss_dssp ETTEEECTTSCCCSCCCSCC-TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred cCCEEEecCCCCCccCCCCC-CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCC
Confidence 45566666666666666442 4667777777766666665566677777777777766654 445666777777777776
Q ss_pred CCCCCCcccCCCCCCCEEEeeCCCCCccccc-ccCCCCCCEEEccCCCCCC-CCchhHhhcCccCcEEEcccCccccccc
Q 006185 97 NHLPDLSLIGELSGLEILDLSKSDVNEIPVS-FGRLSHLRLLDLTDCYNLE-LIPPGVLSRLRKLEELYMSHSFCHWQFE 174 (657)
Q Consensus 97 ~~~~~~~~~~~l~~L~~L~l~~~~i~~lp~~-i~~l~~L~~L~l~~c~~~~-~~~~~~~~~l~~L~~L~l~~~~~~~~~~ 174 (657)
.....|..+ ...++.|++.++.+..++.. +.....++.++...+.... ......+..+++|+.+++.++.+.
T Consensus 90 ~l~~l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~---- 163 (305)
T d1xkua_ 90 QLKELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT---- 163 (305)
T ss_dssp CCSBCCSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC----
T ss_pred ccCcCccch--hhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcc----
Confidence 644444322 34566666666666655543 4455566666655532111 111222556666777776665432
Q ss_pred cccccccccchhhhcCCCCccEEEeecCCCccCCCC--CCCCCccEEEEEE
Q 006185 175 SEEDTRSNAKFIELGALSRLTSLHIDIPKGEIMPSD--MSLPNLTSFSITI 223 (657)
Q Consensus 175 g~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~--~~l~~L~~L~l~~ 223 (657)
..+. ...++|+.|+++++........ ..++.++.|.+++
T Consensus 164 --------~l~~--~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~ 204 (305)
T d1xkua_ 164 --------TIPQ--GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSF 204 (305)
T ss_dssp --------SCCS--SCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCS
T ss_pred --------ccCc--ccCCccCEEECCCCcCCCCChhHhhcccccccccccc
Confidence 1111 1245666777666655333222 3445555555443
No 5
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=3.1e-18 Score=164.38 Aligned_cols=184 Identities=20% Similarity=0.181 Sum_probs=160.7
Q ss_pred CCCCCCCCC-CCCCCCccEEEccCCCccccCCCC--CCCCCcEEEecCCcCcCCCchhhcCCCCccEEEecCCcCCCCCc
Q 006185 4 GVELKDWPS-INTFEDLTGISLMFNDIHEVPDGL--ECPKLQALFLQKNHLLVIPDPFFQGMKDLKVLDLGGIRMVSPPS 80 (657)
Q Consensus 4 ~~~l~~~~~-~~~~~~L~~L~l~~~~~~~l~~~~--~~~~L~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~~~~~lp~ 80 (657)
+++++.+|+ + .+++++|+|++|.++.++... .+++|++|++++|.+..++. ++.+++|++|++++|+++..+.
T Consensus 19 ~~~L~~iP~~l--p~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~--~~~l~~L~~L~Ls~N~l~~~~~ 94 (266)
T d1p9ag_ 19 KRNLTALPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLGTLDLSHNQLQSLPL 94 (266)
T ss_dssp TSCCSSCCSCC--CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCCEEECCSSCCSSCCC
T ss_pred CCCCCeeCcCc--CcCCCEEECcCCcCCCcCHHHhhcccccccccccccccccccc--cccccccccccccccccccccc
Confidence 567888884 4 368999999999999988653 89999999999999988876 6789999999999999999999
Q ss_pred cccCCCCCcEEEccCCCCCCC-CcccCCCCCCCEEEeeCCCCCccccc-ccCCCCCCEEEccCCCCCCCCchhHhhcCcc
Q 006185 81 SLSFLSNLRTLRLDYCNHLPD-LSLIGELSGLEILDLSKSDVNEIPVS-FGRLSHLRLLDLTDCYNLELIPPGVLSRLRK 158 (657)
Q Consensus 81 ~~~~l~~L~~L~l~~~~~~~~-~~~~~~l~~L~~L~l~~~~i~~lp~~-i~~l~~L~~L~l~~c~~~~~~~~~~~~~l~~ 158 (657)
.+.++++|++|+++++..... +..+..+.++++|+++++.++.+|.. +..+++|+++++++ +.++.++.+.+..+++
T Consensus 95 ~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~-N~l~~~~~~~~~~l~~ 173 (266)
T d1p9ag_ 95 LGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLAN-NNLTELPAGLLNGLEN 173 (266)
T ss_dssp CTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT-SCCSCCCTTTTTTCTT
T ss_pred ccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhccccc-ccccccCccccccccc
Confidence 999999999999999985554 47778999999999999999988765 67899999999999 5677888777899999
Q ss_pred CcEEEcccCccccccccccccccccchhhhcCCCCccEEEeecCCC
Q 006185 159 LEELYMSHSFCHWQFESEEDTRSNAKFIELGALSRLTSLHIDIPKG 204 (657)
Q Consensus 159 L~~L~l~~~~~~~~~~g~~~~~~~~~~~~l~~l~~L~~L~l~~~~~ 204 (657)
|++|++++|.+. .++.++..+++|+.|++++|..
T Consensus 174 L~~L~Ls~N~L~------------~lp~~~~~~~~L~~L~L~~Np~ 207 (266)
T d1p9ag_ 174 LDTLLLQENSLY------------TIPKGFFGSHLLPFAFLHGNPW 207 (266)
T ss_dssp CCEEECCSSCCC------------CCCTTTTTTCCCSEEECCSCCB
T ss_pred cceeecccCCCc------------ccChhHCCCCCCCEEEecCCCC
Confidence 999999999775 5666778899999999999863
No 6
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.75 E-value=4.4e-17 Score=160.00 Aligned_cols=168 Identities=20% Similarity=0.213 Sum_probs=114.3
Q ss_pred CCcEEEecCCcCcCCCchhhcCCCCccEEEecCCcCCCCCc-cccCCCCCcEEEccCCCCCCC-CcccCCCCCCCEEEee
Q 006185 40 KLQALFLQKNHLLVIPDPFFQGMKDLKVLDLGGIRMVSPPS-SLSFLSNLRTLRLDYCNHLPD-LSLIGELSGLEILDLS 117 (657)
Q Consensus 40 ~L~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~~~~~lp~-~~~~l~~L~~L~l~~~~~~~~-~~~~~~l~~L~~L~l~ 117 (657)
..++++-++..++++|..+ .+.+++|++++|+++++|+ +|.++++|++|++++|..... |..|.++++|++|+++
T Consensus 11 ~~~~~~C~~~~L~~lP~~l---~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~ 87 (305)
T d1xkua_ 11 HLRVVQCSDLGLEKVPKDL---PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87 (305)
T ss_dssp ETTEEECTTSCCCSCCCSC---CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred cCCEEEecCCCCCccCCCC---CCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEeccc
Confidence 4567777777777777764 2567888888888887775 577888888888888875554 4667888888888888
Q ss_pred CCCCCcccccccCCCCCCEEEccCCCCCCCCchhHhhcCccCcEEEcccCccccccccccccccccchhhhcCCCCccEE
Q 006185 118 KSDVNEIPVSFGRLSHLRLLDLTDCYNLELIPPGVLSRLRKLEELYMSHSFCHWQFESEEDTRSNAKFIELGALSRLTSL 197 (657)
Q Consensus 118 ~~~i~~lp~~i~~l~~L~~L~l~~c~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~g~~~~~~~~~~~~l~~l~~L~~L 197 (657)
+|.++.+|..+. ..++.|++.+ +.+..++...+.....++.++...+.... .......+..+++|+.+
T Consensus 88 ~n~l~~l~~~~~--~~l~~L~~~~-n~l~~l~~~~~~~~~~~~~l~~~~n~~~~---------~~~~~~~~~~l~~L~~l 155 (305)
T d1xkua_ 88 KNQLKELPEKMP--KTLQELRVHE-NEITKVRKSVFNGLNQMIVVELGTNPLKS---------SGIENGAFQGMKKLSYI 155 (305)
T ss_dssp SSCCSBCCSSCC--TTCCEEECCS-SCCCBBCHHHHTTCTTCCEEECCSSCCCG---------GGBCTTGGGGCTTCCEE
T ss_pred CCccCcCccchh--hhhhhhhccc-cchhhhhhhhhhccccccccccccccccc---------cCCCccccccccccCcc
Confidence 888887776533 4677787777 45666666656667777777766553321 11334456677778888
Q ss_pred EeecCCCccCCCCCCCCCccEEEEEE
Q 006185 198 HIDIPKGEIMPSDMSLPNLTSFSITI 223 (657)
Q Consensus 198 ~l~~~~~~~~~~~~~l~~L~~L~l~~ 223 (657)
++..+.+..++.. .+++|++|++.+
T Consensus 156 ~l~~n~l~~l~~~-~~~~L~~L~l~~ 180 (305)
T d1xkua_ 156 RIADTNITTIPQG-LPPSLTELHLDG 180 (305)
T ss_dssp ECCSSCCCSCCSS-CCTTCSEEECTT
T ss_pred ccccCCccccCcc-cCCccCEEECCC
Confidence 8877776655543 245666666543
No 7
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.74 E-value=1.7e-17 Score=151.33 Aligned_cols=154 Identities=21% Similarity=0.284 Sum_probs=103.9
Q ss_pred CCCCCCCCCCCccEEEccCCCccccCCCCCCCCCcEEEecCCcCcCCCchhhcCCCCccEEEecCCcCCCCCccccCCCC
Q 006185 8 KDWPSINTFEDLTGISLMFNDIHEVPDGLECPKLQALFLQKNHLLVIPDPFFQGMKDLKVLDLGGIRMVSPPSSLSFLSN 87 (657)
Q Consensus 8 ~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~~~~~lp~~~~~l~~ 87 (657)
.+.+..+.++++++|+++++.+++++....+++|++|++++|.+..+++ |+++++|++|++++|.+..++. +.++++
T Consensus 31 ~~~~~~~~l~~l~~L~l~~~~i~~l~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~~~~-l~~l~~ 107 (199)
T d2omxa2 31 TDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP-LANLTN 107 (199)
T ss_dssp TSEECHHHHTTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-GTTCTT
T ss_pred CCccCHHHhcCCCEEECCCCCCCCccccccCCCcCcCccccccccCccc--ccCCcccccccccccccccccc-cccccc
Confidence 3333344566777777777777776654467777777777777766655 5777777777777777666653 667777
Q ss_pred CcEEEccCCCCCCCCcccCCCCCCCEEEeeCCCCCcccccccCCCCCCEEEccCCCCCCCCchhHhhcCccCcEEEcccC
Q 006185 88 LRTLRLDYCNHLPDLSLIGELSGLEILDLSKSDVNEIPVSFGRLSHLRLLDLTDCYNLELIPPGVLSRLRKLEELYMSHS 167 (657)
Q Consensus 88 L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~lp~~i~~l~~L~~L~l~~c~~~~~~~~~~~~~l~~L~~L~l~~~ 167 (657)
|++|+++++. ......+..+++|++|++++|.+..++ .+..+++|++|++.+| .+..++. ++++++|++|++++|
T Consensus 108 L~~L~l~~~~-~~~~~~~~~l~~L~~L~l~~n~l~~~~-~l~~~~~L~~L~l~~n-~l~~l~~--l~~l~~L~~L~ls~N 182 (199)
T d2omxa2 108 LTGLTLFNNQ-ITDIDPLKNLTNLNRLELSSNTISDIS-ALSGLTSLQQLNFSSN-QVTDLKP--LANLTTLERLDISSN 182 (199)
T ss_dssp CSEEECCSSC-CCCCGGGTTCTTCSEEECCSSCCCCCG-GGTTCTTCSEEECCSS-CCCCCGG--GTTCTTCCEEECCSS
T ss_pred cccccccccc-cccccccchhhhhHHhhhhhhhhcccc-cccccccccccccccc-cccCCcc--ccCCCCCCEEECCCC
Confidence 7777777766 344455667777777777777776654 4667777777777774 4555554 667777777777776
Q ss_pred cc
Q 006185 168 FC 169 (657)
Q Consensus 168 ~~ 169 (657)
.+
T Consensus 183 ~i 184 (199)
T d2omxa2 183 KV 184 (199)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 8
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=3.4e-17 Score=158.81 Aligned_cols=208 Identities=25% Similarity=0.328 Sum_probs=171.0
Q ss_pred CCCCCCCCCCCCCCCccEEEccCCCccccCCCC--CCCCCcEEEecCCcCcCCCchhhcCCCCccEEEecCC-cCCCC-C
Q 006185 4 GVELKDWPSINTFEDLTGISLMFNDIHEVPDGL--ECPKLQALFLQKNHLLVIPDPFFQGMKDLKVLDLGGI-RMVSP-P 79 (657)
Q Consensus 4 ~~~l~~~~~~~~~~~L~~L~l~~~~~~~l~~~~--~~~~L~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~-~~~~l-p 79 (657)
+.+++.+|. .-.+.+++|+|++|.++.+|... ++++|++|+++++.+..++...+..+..++.+....+ .++.+ +
T Consensus 20 ~~~L~~iP~-~ip~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~ 98 (284)
T d1ozna_ 20 QQGLQAVPV-GIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDP 98 (284)
T ss_dssp SSCCSSCCT-TCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCT
T ss_pred CCCCCccCC-CCCCCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccc
Confidence 456788884 23477899999999999998754 8899999999999998888888889999999987654 56666 5
Q ss_pred ccccCCCCCcEEEccCCCCCCC-CcccCCCCCCCEEEeeCCCCCcccc-cccCCCCCCEEEccCCCCCCCCchhHhhcCc
Q 006185 80 SSLSFLSNLRTLRLDYCNHLPD-LSLIGELSGLEILDLSKSDVNEIPV-SFGRLSHLRLLDLTDCYNLELIPPGVLSRLR 157 (657)
Q Consensus 80 ~~~~~l~~L~~L~l~~~~~~~~-~~~~~~l~~L~~L~l~~~~i~~lp~-~i~~l~~L~~L~l~~c~~~~~~~~~~~~~l~ 157 (657)
..+.++++|++|++++|..... +..+....+|+.++++++.++.+|. .+..+++|++|+++++ .++.++..++.+++
T Consensus 99 ~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N-~l~~l~~~~f~~l~ 177 (284)
T d1ozna_ 99 ATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGN-RISSVPERAFRGLH 177 (284)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS-CCCEECTTTTTTCT
T ss_pred hhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccC-cccccchhhhcccc
Confidence 6789999999999999985443 4677888999999999999998865 4788999999999994 67788777788999
Q ss_pred cCcEEEcccCccccccccccccccccchhhhcCCCCccEEEeecCCCccCCCC--CCCCCccEEEEEEc
Q 006185 158 KLEELYMSHSFCHWQFESEEDTRSNAKFIELGALSRLTSLHIDIPKGEIMPSD--MSLPNLTSFSITIG 224 (657)
Q Consensus 158 ~L~~L~l~~~~~~~~~~g~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~--~~l~~L~~L~l~~~ 224 (657)
+|+++++++|.+.. ..+..+..+++|+.|+++.|.+..++.. ..+++|+.|++.++
T Consensus 178 ~L~~l~l~~N~l~~-----------i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N 235 (284)
T d1ozna_ 178 SLDRLLLHQNRVAH-----------VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235 (284)
T ss_dssp TCCEEECCSSCCCE-----------ECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSS
T ss_pred ccchhhhhhccccc-----------cChhHhhhhhhcccccccccccccccccccccccccCEEEecCC
Confidence 99999999886643 4567788899999999999998777654 67888999998876
No 9
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.74 E-value=3e-17 Score=153.47 Aligned_cols=198 Identities=19% Similarity=0.288 Sum_probs=165.3
Q ss_pred CCCCCCCCCCCCCCccEEEccCCCccccCCCCCCCCCcEEEecCCcCcCCCchhhcCCCCccEEEecCCcCCCCCccccC
Q 006185 5 VELKDWPSINTFEDLTGISLMFNDIHEVPDGLECPKLQALFLQKNHLLVIPDPFFQGMKDLKVLDLGGIRMVSPPSSLSF 84 (657)
Q Consensus 5 ~~l~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~~~~~lp~~~~~ 84 (657)
.++.+....+.+.+|+.|++.+|.+++++....+++|++|++++|.+..+++ |.++++|++++++++.++.++ .+..
T Consensus 29 ~~~~d~~~~~~l~~L~~L~l~~~~i~~l~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~~i~-~l~~ 105 (227)
T d1h6ua2 29 SNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNVS-AIAG 105 (227)
T ss_dssp SSTTSEECHHHHHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCCG-GGTT
T ss_pred CCcCCcCCHHHcCCcCEEECCCCCCCcchhHhcCCCCcEeecCCceeecccc--ccccccccccccccccccccc-cccc
Confidence 3455555567789999999999999999754599999999999999887776 789999999999999988775 5789
Q ss_pred CCCCcEEEccCCCCCCCCcccCCCCCCCEEEeeCCCCCcccccccCCCCCCEEEccCCCCCCCCchhHhhcCccCcEEEc
Q 006185 85 LSNLRTLRLDYCNHLPDLSLIGELSGLEILDLSKSDVNEIPVSFGRLSHLRLLDLTDCYNLELIPPGVLSRLRKLEELYM 164 (657)
Q Consensus 85 l~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~lp~~i~~l~~L~~L~l~~c~~~~~~~~~~~~~l~~L~~L~l 164 (657)
+++|++++++++. ......+...+.++.+.++++.+...+ .+.+.++|++|++.+| .+...+. ++++++|++|++
T Consensus 106 l~~L~~l~l~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~L~~L~l~~n-~~~~~~~--l~~l~~L~~L~L 180 (227)
T d1h6ua2 106 LQSIKTLDLTSTQ-ITDVTPLAGLSNLQVLYLDLNQITNIS-PLAGLTNLQYLSIGNA-QVSDLTP--LANLSKLTTLKA 180 (227)
T ss_dssp CTTCCEEECTTSC-CCCCGGGTTCTTCCEEECCSSCCCCCG-GGGGCTTCCEEECCSS-CCCCCGG--GTTCTTCCEEEC
T ss_pred ccccccccccccc-ccccchhccccchhhhhchhhhhchhh-hhcccccccccccccc-ccccchh--hcccccceeccc
Confidence 9999999999988 566677888999999999998887654 4778899999999995 4445544 789999999999
Q ss_pred ccCccccccccccccccccchhhhcCCCCccEEEeecCCCccCCCCCCCCCccEEEEEE
Q 006185 165 SHSFCHWQFESEEDTRSNAKFIELGALSRLTSLHIDIPKGEIMPSDMSLPNLTSFSITI 223 (657)
Q Consensus 165 ~~~~~~~~~~g~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~L~~L~l~~ 223 (657)
++|.+. .+..++++++|++|++++|++..++....+++|+.|++++
T Consensus 181 s~n~l~-------------~l~~l~~l~~L~~L~Ls~N~lt~i~~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 181 DDNKIS-------------DISPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTN 226 (227)
T ss_dssp CSSCCC-------------CCGGGGGCTTCCEEECTTSCCCBCGGGTTCTTCCEEEEEE
T ss_pred CCCccC-------------CChhhcCCCCCCEEECcCCcCCCCcccccCCCCCEEEeeC
Confidence 998653 2345888999999999999988888777899999999874
No 10
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.73 E-value=2.4e-17 Score=151.73 Aligned_cols=145 Identities=30% Similarity=0.404 Sum_probs=74.5
Q ss_pred CCCccEEEccCCCccccCCCCCCCCCcEEEecCCcCcCCCchhhcCCCCccEEEecCCcCCCCCccccCCCCCcEEEccC
Q 006185 16 FEDLTGISLMFNDIHEVPDGLECPKLQALFLQKNHLLVIPDPFFQGMKDLKVLDLGGIRMVSPPSSLSFLSNLRTLRLDY 95 (657)
Q Consensus 16 ~~~L~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~~~~~lp~~~~~l~~L~~L~l~~ 95 (657)
+..+++|++++|.++.++....+++|++|++++|.+..+++ ++.+++|++|++++|+++.+| .+..+++|+.|++++
T Consensus 45 L~~L~~L~l~~~~i~~l~~l~~l~~L~~L~L~~n~i~~l~~--~~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~ 121 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLS-SLKDLKKLKSLSLEH 121 (210)
T ss_dssp HHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCGG-GGTTCTTCCEEECTT
T ss_pred hcCccEEECcCCCCCCchhHhhCCCCCEEeCCCccccCccc--cccCccccccccccccccccc-ccccccccccccccc
Confidence 44555555555555555433355555555555555554443 345555555555555555544 345555555555555
Q ss_pred CCCCCCCcccCCCCCCCEEEeeCCCCCcccccccCCCCCCEEEccCCCCCCCCchhHhhcCccCcEEEcccCc
Q 006185 96 CNHLPDLSLIGELSGLEILDLSKSDVNEIPVSFGRLSHLRLLDLTDCYNLELIPPGVLSRLRKLEELYMSHSF 168 (657)
Q Consensus 96 ~~~~~~~~~~~~l~~L~~L~l~~~~i~~lp~~i~~l~~L~~L~l~~c~~~~~~~~~~~~~l~~L~~L~l~~~~ 168 (657)
|. ...+..+..+++|++++++++.++..+ .+.++++|+++++++| .+..++. +.++++|++|++++|.
T Consensus 122 ~~-~~~~~~l~~l~~l~~l~~~~n~l~~~~-~~~~l~~L~~l~l~~n-~l~~i~~--l~~l~~L~~L~Ls~N~ 189 (210)
T d1h6ta2 122 NG-ISDINGLVHLPQLESLYLGNNKITDIT-VLSRLTKLDTLSLEDN-QISDIVP--LAGLTKLQNLYLSKNH 189 (210)
T ss_dssp SC-CCCCGGGGGCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSS-CCCCCGG--GTTCTTCCEEECCSSC
T ss_pred cc-ccccccccccccccccccccccccccc-cccccccccccccccc-ccccccc--ccCCCCCCEEECCCCC
Confidence 55 333444555555555555555554432 3444555555555553 3334432 4555555555555553
No 11
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.73 E-value=7.7e-16 Score=154.46 Aligned_cols=177 Identities=18% Similarity=0.143 Sum_probs=120.6
Q ss_pred CCccEEEccCCCccccCCCCCCCCCcEEEecCCcCcCCCchhhcCCCCccEEEecCCcCCCCCccccCCCCCcEEEccCC
Q 006185 17 EDLTGISLMFNDIHEVPDGLECPKLQALFLQKNHLLVIPDPFFQGMKDLKVLDLGGIRMVSPPSSLSFLSNLRTLRLDYC 96 (657)
Q Consensus 17 ~~L~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~~~~~lp~~~~~l~~L~~L~l~~~ 96 (657)
.++++|+++++.++.+|+. .++|++|++++|.+.++|+. ..+|+.|++++++++.++... ..|++|++++|
T Consensus 38 ~~l~~LdLs~~~L~~lp~~--~~~L~~L~Ls~N~l~~lp~~----~~~L~~L~l~~n~l~~l~~lp---~~L~~L~L~~n 108 (353)
T d1jl5a_ 38 RQAHELELNNLGLSSLPEL--PPHLESLVASCNSLTELPEL----PQSLKSLLVDNNNLKALSDLP---PLLEYLGVSNN 108 (353)
T ss_dssp HTCSEEECTTSCCSCCCSC--CTTCSEEECCSSCCSSCCCC----CTTCCEEECCSSCCSCCCSCC---TTCCEEECCSS
T ss_pred cCCCEEEeCCCCCCCCCCC--CCCCCEEECCCCCCcccccc----hhhhhhhhhhhcccchhhhhc---ccccccccccc
Confidence 4688999999999988864 56899999999998888863 468899999999887766421 46899999988
Q ss_pred CCCCCCcccCCCCCCCEEEeeCCCCCcccccccCCCCCCEEEccCCCCCCCCchhHhhcCccCcEEEcccCccccccccc
Q 006185 97 NHLPDLSLIGELSGLEILDLSKSDVNEIPVSFGRLSHLRLLDLTDCYNLELIPPGVLSRLRKLEELYMSHSFCHWQFESE 176 (657)
Q Consensus 97 ~~~~~~~~~~~l~~L~~L~l~~~~i~~lp~~i~~l~~L~~L~l~~c~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~g~ 176 (657)
.....| .++++++|++|+++++.+...|..+ ..+..+.+.++... .... +..++.++.+++.++....
T Consensus 109 ~l~~lp-~~~~l~~L~~L~l~~~~~~~~~~~~---~~l~~l~~~~~~~~-~~~~--l~~l~~l~~L~l~~n~~~~----- 176 (353)
T d1jl5a_ 109 QLEKLP-ELQNSSFLKIIDVDNNSLKKLPDLP---PSLEFIAAGNNQLE-ELPE--LQNLPFLTAIYADNNSLKK----- 176 (353)
T ss_dssp CCSSCC-CCTTCTTCCEEECCSSCCSCCCCCC---TTCCEEECCSSCCS-SCCC--CTTCTTCCEEECCSSCCSS-----
T ss_pred cccccc-chhhhccceeecccccccccccccc---ccccchhhcccccc-cccc--ccccccceecccccccccc-----
Confidence 844444 5688899999999988888766544 45566766663322 2222 5778888888887764321
Q ss_pred cccccccchhhhcCCCCccEEEeecCCCccCCCCCCCCCccEEEEEEc
Q 006185 177 EDTRSNAKFIELGALSRLTSLHIDIPKGEIMPSDMSLPNLTSFSITIG 224 (657)
Q Consensus 177 ~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~L~~L~l~~~ 224 (657)
.+ ......+.+.........++....++.|+.+.+.++
T Consensus 177 -------~~---~~~~~~~~l~~~~~~~~~~~~~~~l~~L~~l~l~~n 214 (353)
T d1jl5a_ 177 -------LP---DLPLSLESIVAGNNILEELPELQNLPFLTTIYADNN 214 (353)
T ss_dssp -------CC---CCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSS
T ss_pred -------cc---cccccccccccccccccccccccccccccccccccc
Confidence 10 111233445555555555555556666777666544
No 12
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.71 E-value=4.4e-17 Score=160.61 Aligned_cols=127 Identities=22% Similarity=0.312 Sum_probs=63.7
Q ss_pred CCcEEEecCCcCc---CCCchhhcCCCCccEEEecC-CcCC-CCCccccCCCCCcEEEccCCCCCCC-CcccCCCCCCCE
Q 006185 40 KLQALFLQKNHLL---VIPDPFFQGMKDLKVLDLGG-IRMV-SPPSSLSFLSNLRTLRLDYCNHLPD-LSLIGELSGLEI 113 (657)
Q Consensus 40 ~L~~L~l~~~~~~---~~~~~~~~~l~~Lr~L~L~~-~~~~-~lp~~~~~l~~L~~L~l~~~~~~~~-~~~~~~l~~L~~ 113 (657)
+++.|+++++.+. .+|+. ++++++|++|+|++ |++. .+|..|+++++|++|++++|..... +..+..+.+|++
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~-l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSS-LANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGG-GGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEECCCCCCCCCCCCChH-HhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcc
Confidence 4555555555444 24444 35555555555554 3332 4555555555555555555553222 244555555555
Q ss_pred EEeeCCCCC-cccccccCCCCCCEEEccCCCCCCCCchhHhhcCccC-cEEEcccCc
Q 006185 114 LDLSKSDVN-EIPVSFGRLSHLRLLDLTDCYNLELIPPGVLSRLRKL-EELYMSHSF 168 (657)
Q Consensus 114 L~l~~~~i~-~lp~~i~~l~~L~~L~l~~c~~~~~~~~~~~~~l~~L-~~L~l~~~~ 168 (657)
++++++.+. .+|..++++++|++++++++...+.+|.. +..+.++ +.+++++|.
T Consensus 130 l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~-~~~l~~l~~~l~~~~n~ 185 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDS-YGSFSKLFTSMTISRNR 185 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGG-GGCCCTTCCEEECCSSE
T ss_pred cccccccccccCchhhccCcccceeeccccccccccccc-ccccccccccccccccc
Confidence 555555433 44555555555555555554433344444 4444443 445555443
No 13
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.69 E-value=1.4e-16 Score=145.24 Aligned_cols=181 Identities=19% Similarity=0.267 Sum_probs=148.9
Q ss_pred CccEEEccCCCccccCCCCCCCCCcEEEecCCcCcCCCchhhcCCCCccEEEecCCcCCCCCccccCCCCCcEEEccCCC
Q 006185 18 DLTGISLMFNDIHEVPDGLECPKLQALFLQKNHLLVIPDPFFQGMKDLKVLDLGGIRMVSPPSSLSFLSNLRTLRLDYCN 97 (657)
Q Consensus 18 ~L~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~~~~~lp~~~~~l~~L~~L~l~~~~ 97 (657)
++....++.+.+++......++++++|+++++.+.++.. ++.+++|++|++++|+++.++. ++++++|++|++++|.
T Consensus 19 ~~i~~~l~~~~~~~~~~~~~l~~l~~L~l~~~~i~~l~~--l~~l~nL~~L~Ls~N~l~~~~~-l~~l~~L~~L~l~~n~ 95 (199)
T d2omxa2 19 EKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG--VEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQ 95 (199)
T ss_dssp HHHHHHTTCSSTTSEECHHHHTTCCEEECTTSCCCCCTT--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred HHHHHHhCCCCCCCccCHHHhcCCCEEECCCCCCCCccc--cccCCCcCcCccccccccCccc-ccCCcccccccccccc
Confidence 333455666777665544467899999999999988765 6889999999999999988875 8999999999999998
Q ss_pred CCCCCcccCCCCCCCEEEeeCCCCCcccccccCCCCCCEEEccCCCCCCCCchhHhhcCccCcEEEcccCcccccccccc
Q 006185 98 HLPDLSLIGELSGLEILDLSKSDVNEIPVSFGRLSHLRLLDLTDCYNLELIPPGVLSRLRKLEELYMSHSFCHWQFESEE 177 (657)
Q Consensus 98 ~~~~~~~~~~l~~L~~L~l~~~~i~~lp~~i~~l~~L~~L~l~~c~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~g~~ 177 (657)
......++++++|++|+++++.+..++ .+..+++|++|++++| .+..++. +..+++|++|++.+|.+.
T Consensus 96 -~~~~~~l~~l~~L~~L~l~~~~~~~~~-~~~~l~~L~~L~l~~n-~l~~~~~--l~~~~~L~~L~l~~n~l~------- 163 (199)
T d2omxa2 96 -IADITPLANLTNLTGLTLFNNQITDID-PLKNLTNLNRLELSSN-TISDISA--LSGLTSLQQLNFSSNQVT------- 163 (199)
T ss_dssp -CCCCGGGTTCTTCSEEECCSSCCCCCG-GGTTCTTCSEEECCSS-CCCCCGG--GTTCTTCSEEECCSSCCC-------
T ss_pred -ccccccccccccccccccccccccccc-ccchhhhhHHhhhhhh-hhccccc--cccccccccccccccccc-------
Confidence 555556899999999999999887654 5889999999999995 4666664 789999999999998653
Q ss_pred ccccccchhhhcCCCCccEEEeecCCCccCCCCCCCCCccEE
Q 006185 178 DTRSNAKFIELGALSRLTSLHIDIPKGEIMPSDMSLPNLTSF 219 (657)
Q Consensus 178 ~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~L~~L 219 (657)
.+..++++++|+.|++++|++..++....+++|++|
T Consensus 164 ------~l~~l~~l~~L~~L~ls~N~i~~i~~l~~L~~L~~L 199 (199)
T d2omxa2 164 ------DLKPLANLTTLERLDISSNKVSDISVLAKLTNLESL 199 (199)
T ss_dssp ------CCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEE
T ss_pred ------CCccccCCCCCCEEECCCCCCCCCccccCCCCCCcC
Confidence 234588999999999999998877766677888765
No 14
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.69 E-value=1.6e-16 Score=146.03 Aligned_cols=156 Identities=22% Similarity=0.334 Sum_probs=138.9
Q ss_pred CCCCCCCCCCCCCCCCccEEEccCCCccccCCCCCCCCCcEEEecCCcCcCCCchhhcCCCCccEEEecCCcCCCCCccc
Q 006185 3 AGVELKDWPSINTFEDLTGISLMFNDIHEVPDGLECPKLQALFLQKNHLLVIPDPFFQGMKDLKVLDLGGIRMVSPPSSL 82 (657)
Q Consensus 3 ~~~~l~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~~~~~lp~~~ 82 (657)
+++.++.++.+..+++|++|++++|.+++++....+++|++|++++|.+..++. +.++++|++|+++++.+..++ .+
T Consensus 54 ~~~~i~~l~~l~~l~~L~~L~L~~n~i~~l~~~~~l~~L~~L~l~~n~i~~l~~--l~~l~~L~~L~l~~~~~~~~~-~l 130 (210)
T d1h6ta2 54 NNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSS--LKDLKKLKSLSLEHNGISDIN-GL 130 (210)
T ss_dssp TTSCCCCCTTGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCGGG--GTTCTTCCEEECTTSCCCCCG-GG
T ss_pred cCCCCCCchhHhhCCCCCEEeCCCccccCccccccCcccccccccccccccccc--ccccccccccccccccccccc-cc
Confidence 356778888899999999999999999998876689999999999999988875 789999999999999987765 58
Q ss_pred cCCCCCcEEEccCCCCCCCCcccCCCCCCCEEEeeCCCCCcccccccCCCCCCEEEccCCCCCCCCchhHhhcCccCcEE
Q 006185 83 SFLSNLRTLRLDYCNHLPDLSLIGELSGLEILDLSKSDVNEIPVSFGRLSHLRLLDLTDCYNLELIPPGVLSRLRKLEEL 162 (657)
Q Consensus 83 ~~l~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~lp~~i~~l~~L~~L~l~~c~~~~~~~~~~~~~l~~L~~L 162 (657)
..+.+|++++++++. ++.+..++++++|++++++++.++.++. +.++++|++|++++| .+++++. +.++++|++|
T Consensus 131 ~~l~~l~~l~~~~n~-l~~~~~~~~l~~L~~l~l~~n~l~~i~~-l~~l~~L~~L~Ls~N-~i~~l~~--l~~l~~L~~L 205 (210)
T d1h6ta2 131 VHLPQLESLYLGNNK-ITDITVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKN-HISDLRA--LAGLKNLDVL 205 (210)
T ss_dssp GGCTTCCEEECCSSC-CCCCGGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSS-CCCBCGG--GTTCTTCSEE
T ss_pred ccccccccccccccc-cccccccccccccccccccccccccccc-ccCCCCCCEEECCCC-CCCCChh--hcCCCCCCEE
Confidence 899999999999998 7777888999999999999999998864 899999999999995 6778874 8999999999
Q ss_pred Eccc
Q 006185 163 YMSH 166 (657)
Q Consensus 163 ~l~~ 166 (657)
++++
T Consensus 206 ~Ls~ 209 (210)
T d1h6ta2 206 ELFS 209 (210)
T ss_dssp EEEE
T ss_pred EccC
Confidence 9864
No 15
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.69 E-value=1.2e-17 Score=164.68 Aligned_cols=246 Identities=17% Similarity=0.218 Sum_probs=178.8
Q ss_pred CCccEEEccCCCcc---ccCCCC-CCCCCcEEEecC-CcCc-CCCchhhcCCCCccEEEecCCcCCC-CCccccCCCCCc
Q 006185 17 EDLTGISLMFNDIH---EVPDGL-ECPKLQALFLQK-NHLL-VIPDPFFQGMKDLKVLDLGGIRMVS-PPSSLSFLSNLR 89 (657)
Q Consensus 17 ~~L~~L~l~~~~~~---~l~~~~-~~~~L~~L~l~~-~~~~-~~~~~~~~~l~~Lr~L~L~~~~~~~-lp~~~~~l~~L~ 89 (657)
.+++.|+++++.+. .+|+.+ ++++|++|++++ |.+. .+|.. |+++++|++|++++|++.. .+..+..+.+|+
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~-i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~ 128 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPA-IAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGG-GGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccc-cccccccchhhhccccccccccccccchhhhc
Confidence 36889999999876 577777 899999999987 5666 78877 5899999999999999875 456688999999
Q ss_pred EEEccCCCCC-CCCcccCCCCCCCEEEeeCCCCC-cccccccCCCCC-CEEEccCCCCCCCCchhHhhcCccCcEEEccc
Q 006185 90 TLRLDYCNHL-PDLSLIGELSGLEILDLSKSDVN-EIPVSFGRLSHL-RLLDLTDCYNLELIPPGVLSRLRKLEELYMSH 166 (657)
Q Consensus 90 ~L~l~~~~~~-~~~~~~~~l~~L~~L~l~~~~i~-~lp~~i~~l~~L-~~L~l~~c~~~~~~~~~~~~~l~~L~~L~l~~ 166 (657)
++++++|... ..|..++++++|++++++++.+. .+|..+..+.++ +.++++++...+..|.. +..+..+ .+++.+
T Consensus 129 ~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~-~~~l~~~-~l~l~~ 206 (313)
T d1ogqa_ 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPT-FANLNLA-FVDLSR 206 (313)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGG-GGGCCCS-EEECCS
T ss_pred ccccccccccccCchhhccCcccceeecccccccccccccccccccccccccccccccccccccc-ccccccc-cccccc
Confidence 9999998743 45789999999999999999887 788888888886 78888885444444443 6666544 677776
Q ss_pred CccccccccccccccccchhhhcCCCCccEEEeecCCCc-cCCCCCCCCCccEEEEEEcCccChhhHHHHHhhcccc-cC
Q 006185 167 SFCHWQFESEEDTRSNAKFIELGALSRLTSLHIDIPKGE-IMPSDMSLPNLTSFSITIGEEDTLNDFIELFLENFNK-RC 244 (657)
Q Consensus 167 ~~~~~~~~g~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~-~~ 244 (657)
+... | ..+..+..+++++.+++..+... .++....+++|+.|+++++. +.+.+|+.+.. +.
T Consensus 207 ~~~~----~-------~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~------l~g~iP~~l~~L~~ 269 (313)
T d1ogqa_ 207 NMLE----G-------DASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNR------IYGTLPQGLTQLKF 269 (313)
T ss_dssp SEEE----E-------CCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSC------CEECCCGGGGGCTT
T ss_pred cccc----c-------cccccccccccccccccccccccccccccccccccccccCccCe------ecccCChHHhCCCC
Confidence 6432 2 45566677788888888877653 33434566788888887663 23333444433 77
Q ss_pred cceEEeecccchhhhHHHHHHHHccccEEEEeeccccccc
Q 006185 245 SRAMGLSQDMRISALHSWIKNLLLRSEILALIEVNDLENI 284 (657)
Q Consensus 245 l~~l~l~~~~~~~~l~~~~~~~~~~L~~L~L~~~~~l~~~ 284 (657)
++.+++++|.--..+|+. .. +++|+.+.+.+++.++..
T Consensus 270 L~~L~Ls~N~l~g~iP~~-~~-L~~L~~l~l~~N~~l~g~ 307 (313)
T d1ogqa_ 270 LHSLNVSFNNLCGEIPQG-GN-LQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp CCEEECCSSEEEEECCCS-TT-GGGSCGGGTCSSSEEEST
T ss_pred CCEEECcCCcccccCCCc-cc-CCCCCHHHhCCCccccCC
Confidence 888888887332345532 22 377888888877655543
No 16
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=4.8e-16 Score=150.59 Aligned_cols=192 Identities=20% Similarity=0.264 Sum_probs=158.1
Q ss_pred cEEEccCCCccccCCCCCCCCCcEEEecCCcCcCCCchhhcCCCCccEEEecCCcCCCCC-ccccCCCCCcEEEccCCCC
Q 006185 20 TGISLMFNDIHEVPDGLECPKLQALFLQKNHLLVIPDPFFQGMKDLKVLDLGGIRMVSPP-SSLSFLSNLRTLRLDYCNH 98 (657)
Q Consensus 20 ~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~~~~~lp-~~~~~l~~L~~L~l~~~~~ 98 (657)
.+++.++++++.+|..+- +.+++|++++|.+..+++..|.++++|++|+++++.+..++ ..+..+..++.+....+..
T Consensus 14 ~~v~c~~~~L~~iP~~ip-~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~ 92 (284)
T d1ozna_ 14 VTTSCPQQGLQAVPVGIP-AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQ 92 (284)
T ss_dssp CEEECCSSCCSSCCTTCC-TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTT
T ss_pred eEEEcCCCCCCccCCCCC-CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccc
Confidence 356788888999987653 57899999999999999988999999999999999997654 4567889999998876664
Q ss_pred CCC--CcccCCCCCCCEEEeeCCCCCcccc-cccCCCCCCEEEccCCCCCCCCchhHhhcCccCcEEEcccCcccccccc
Q 006185 99 LPD--LSLIGELSGLEILDLSKSDVNEIPV-SFGRLSHLRLLDLTDCYNLELIPPGVLSRLRKLEELYMSHSFCHWQFES 175 (657)
Q Consensus 99 ~~~--~~~~~~l~~L~~L~l~~~~i~~lp~-~i~~l~~L~~L~l~~c~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~g 175 (657)
++. +..++++++|++|+++++.+..++. .+....+|+.+++++ +.++.+|.+++..+++|++|++++|.+..
T Consensus 93 ~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~-N~l~~i~~~~f~~~~~L~~L~l~~N~l~~---- 167 (284)
T d1ozna_ 93 LRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQD-NALQALPDDTFRDLGNLTHLFLHGNRISS---- 167 (284)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCS-SCCCCCCTTTTTTCTTCCEEECCSSCCCE----
T ss_pred cccccchhhcccccCCEEecCCcccccccccccchhcccchhhhcc-ccccccChhHhccccchhhcccccCcccc----
Confidence 543 5789999999999999999886654 577899999999999 66888887778899999999999997642
Q ss_pred ccccccccchhhhcCCCCccEEEeecCCCccCCCC--CCCCCccEEEEEEc
Q 006185 176 EEDTRSNAKFIELGALSRLTSLHIDIPKGEIMPSD--MSLPNLTSFSITIG 224 (657)
Q Consensus 176 ~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~--~~l~~L~~L~l~~~ 224 (657)
.....+.++++|+.+++..|.+..+... ..+++|+.|+++.+
T Consensus 168 -------l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N 211 (284)
T d1ozna_ 168 -------VPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211 (284)
T ss_dssp -------ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred -------cchhhhccccccchhhhhhccccccChhHhhhhhhccccccccc
Confidence 3446678899999999999988666543 56677888877755
No 17
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.67 E-value=1.3e-15 Score=142.18 Aligned_cols=178 Identities=24% Similarity=0.360 Sum_probs=152.5
Q ss_pred CCCCCCCCCCCCCCCCccEEEccCCCccccCCCCCCCCCcEEEecCCcCcCCCchhhcCCCCccEEEecCCcCCCCCccc
Q 006185 3 AGVELKDWPSINTFEDLTGISLMFNDIHEVPDGLECPKLQALFLQKNHLLVIPDPFFQGMKDLKVLDLGGIRMVSPPSSL 82 (657)
Q Consensus 3 ~~~~l~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~~~~~lp~~~ 82 (657)
.++++++++.+..+++|++|++++|.++.++....+++|+++++++|.+..++. |.++++|++++++++....++ .+
T Consensus 49 ~~~~i~~l~~l~~l~~L~~L~ls~n~i~~~~~l~~l~~l~~l~~~~n~~~~i~~--l~~l~~L~~l~l~~~~~~~~~-~~ 125 (227)
T d1h6ua2 49 FGTGVTTIEGVQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNVSA--IAGLQSIKTLDLTSTQITDVT-PL 125 (227)
T ss_dssp TTSCCCCCTTGGGCTTCCEEECCSSCCCCCGGGTTCCSCCEEECCSCCCSCCGG--GTTCTTCCEEECTTSCCCCCG-GG
T ss_pred CCCCCCcchhHhcCCCCcEeecCCceeecccccccccccccccccccccccccc--ccccccccccccccccccccc-hh
Confidence 356788999999999999999999999988776689999999999999888775 789999999999999876553 46
Q ss_pred cCCCCCcEEEccCCCCCCCCcccCCCCCCCEEEeeCCCCCcccccccCCCCCCEEEccCCCCCCCCchhHhhcCccCcEE
Q 006185 83 SFLSNLRTLRLDYCNHLPDLSLIGELSGLEILDLSKSDVNEIPVSFGRLSHLRLLDLTDCYNLELIPPGVLSRLRKLEEL 162 (657)
Q Consensus 83 ~~l~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~lp~~i~~l~~L~~L~l~~c~~~~~~~~~~~~~l~~L~~L 162 (657)
.....++.+.++++. +.....+.+.++|++|+++++.+...+ .++++++|++|++++| .++.++. ++++++|++|
T Consensus 126 ~~~~~~~~l~~~~~~-~~~~~~~~~~~~L~~L~l~~n~~~~~~-~l~~l~~L~~L~Ls~n-~l~~l~~--l~~l~~L~~L 200 (227)
T d1h6ua2 126 AGLSNLQVLYLDLNQ-ITNISPLAGLTNLQYLSIGNAQVSDLT-PLANLSKLTTLKADDN-KISDISP--LASLPNLIEV 200 (227)
T ss_dssp TTCTTCCEEECCSSC-CCCCGGGGGCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSS-CCCCCGG--GGGCTTCCEE
T ss_pred ccccchhhhhchhhh-hchhhhhccccccccccccccccccch-hhcccccceecccCCC-ccCCChh--hcCCCCCCEE
Confidence 778899999999888 555666888999999999999988765 4899999999999995 6778875 8999999999
Q ss_pred EcccCccccccccccccccccchhhhcCCCCccEEEeec
Q 006185 163 YMSHSFCHWQFESEEDTRSNAKFIELGALSRLTSLHIDI 201 (657)
Q Consensus 163 ~l~~~~~~~~~~g~~~~~~~~~~~~l~~l~~L~~L~l~~ 201 (657)
++++|.+. .+..++++++|+.|+++.
T Consensus 201 ~Ls~N~lt-------------~i~~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 201 HLKNNQIS-------------DVSPLANTSNLFIVTLTN 226 (227)
T ss_dssp ECTTSCCC-------------BCGGGTTCTTCCEEEEEE
T ss_pred ECcCCcCC-------------CCcccccCCCCCEEEeeC
Confidence 99999753 234588999999999864
No 18
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.66 E-value=8.8e-15 Score=146.56 Aligned_cols=188 Identities=20% Similarity=0.257 Sum_probs=133.8
Q ss_pred CCCCCCCCCCCCCCCccEEEccCCCccccCCCCCCCCCcEEEecCCcCcCCCchhhcCCCCccEEEecCCcCCCCCcccc
Q 006185 4 GVELKDWPSINTFEDLTGISLMFNDIHEVPDGLECPKLQALFLQKNHLLVIPDPFFQGMKDLKVLDLGGIRMVSPPSSLS 83 (657)
Q Consensus 4 ~~~l~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~~~~~lp~~~~ 83 (657)
+.+++.+|.. +++|++|++++|.++++|+. ..+|++|++++|.+..+++ + .+.|++|++++|.+..+|. ++
T Consensus 47 ~~~L~~lp~~--~~~L~~L~Ls~N~l~~lp~~--~~~L~~L~l~~n~l~~l~~--l--p~~L~~L~L~~n~l~~lp~-~~ 117 (353)
T d1jl5a_ 47 NLGLSSLPEL--PPHLESLVASCNSLTELPEL--PQSLKSLLVDNNNLKALSD--L--PPLLEYLGVSNNQLEKLPE-LQ 117 (353)
T ss_dssp TSCCSCCCSC--CTTCSEEECCSSCCSSCCCC--CTTCCEEECCSSCCSCCCS--C--CTTCCEEECCSSCCSSCCC-CT
T ss_pred CCCCCCCCCC--CCCCCEEECCCCCCcccccc--hhhhhhhhhhhcccchhhh--h--ccccccccccccccccccc-hh
Confidence 4577888854 57999999999999999975 4689999999999887765 2 2569999999999999985 68
Q ss_pred CCCCCcEEEccCCCCCCCCcccCCCCCCCEEEeeCCCCCcccccccCCCCCCEEEccCCCCCCCCchhHhhcCccCcEEE
Q 006185 84 FLSNLRTLRLDYCNHLPDLSLIGELSGLEILDLSKSDVNEIPVSFGRLSHLRLLDLTDCYNLELIPPGVLSRLRKLEELY 163 (657)
Q Consensus 84 ~l~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~lp~~i~~l~~L~~L~l~~c~~~~~~~~~~~~~l~~L~~L~ 163 (657)
++++|++|+++++.....+.. ...+..+++..+.... +..++.++.++.+++.++. ....+. .....+.+.
T Consensus 118 ~l~~L~~L~l~~~~~~~~~~~---~~~l~~l~~~~~~~~~-~~~l~~l~~l~~L~l~~n~-~~~~~~----~~~~~~~l~ 188 (353)
T d1jl5a_ 118 NSSFLKIIDVDNNSLKKLPDL---PPSLEFIAAGNNQLEE-LPELQNLPFLTAIYADNNS-LKKLPD----LPLSLESIV 188 (353)
T ss_dssp TCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCSS-CCCCTTCTTCCEEECCSSC-CSSCCC----CCTTCCEEE
T ss_pred hhccceeeccccccccccccc---cccccchhhccccccc-cccccccccceeccccccc-cccccc----ccccccccc
Confidence 899999999999985544443 3556777777665443 3457788899999998843 333332 122344555
Q ss_pred cccCccccccccccccccccchhhhcCCCCccEEEeecCCCccCCCCCCCCCccEEEEEEc
Q 006185 164 MSHSFCHWQFESEEDTRSNAKFIELGALSRLTSLHIDIPKGEIMPSDMSLPNLTSFSITIG 224 (657)
Q Consensus 164 l~~~~~~~~~~g~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~L~~L~l~~~ 224 (657)
.....+ ........++.|+.++++.+....++.. ..++..+.+..+
T Consensus 189 ~~~~~~-------------~~~~~~~~l~~L~~l~l~~n~~~~~~~~--~~~l~~~~~~~~ 234 (353)
T d1jl5a_ 189 AGNNIL-------------EELPELQNLPFLTTIYADNNLLKTLPDL--PPSLEALNVRDN 234 (353)
T ss_dssp CCSSCC-------------SSCCCCTTCTTCCEEECCSSCCSSCCSC--CTTCCEEECCSS
T ss_pred cccccc-------------cccccccccccccccccccccccccccc--cccccccccccc
Confidence 544332 2233466788899999988876655543 445666655543
No 19
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=7.1e-15 Score=141.73 Aligned_cols=124 Identities=19% Similarity=0.195 Sum_probs=69.8
Q ss_pred cEEEecCCcCc-CCCchhhcCCCCccEEEecCCcCCCCCccccCCCCCcEEEccCCCCCCC--CcccCCCCCCCEEEeeC
Q 006185 42 QALFLQKNHLL-VIPDPFFQGMKDLKVLDLGGIRMVSPPSSLSFLSNLRTLRLDYCNHLPD--LSLIGELSGLEILDLSK 118 (657)
Q Consensus 42 ~~L~l~~~~~~-~~~~~~~~~l~~Lr~L~L~~~~~~~lp~~~~~l~~L~~L~l~~~~~~~~--~~~~~~l~~L~~L~l~~ 118 (657)
+++|++++.+. +....++. .....+.++...+...........+|++|++++|..... ...+.++++|++|++++
T Consensus 3 ~~lDLs~~~l~~~~l~~l~~--~~~~~lrl~~~~~~~~~~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~ 80 (284)
T d2astb2 3 QTLDLTGKNLHPDVTGRLLS--QGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEG 80 (284)
T ss_dssp SEEECTTCBCCHHHHHHHHH--TTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTT
T ss_pred CEEECCCCCCCchHHHHHHh--ccceEeeccccccccchhhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccc
Confidence 35666666543 22222222 234555555554443333344556777777777652211 24456677777777777
Q ss_pred CCCC-cccccccCCCCCCEEEccCCCCCCCCch-hHhhcCccCcEEEcccC
Q 006185 119 SDVN-EIPVSFGRLSHLRLLDLTDCYNLELIPP-GVLSRLRKLEELYMSHS 167 (657)
Q Consensus 119 ~~i~-~lp~~i~~l~~L~~L~l~~c~~~~~~~~-~~~~~l~~L~~L~l~~~ 167 (657)
|.++ ..+..++++++|++|++++|..+++... .+...+++|++|++++|
T Consensus 81 ~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c 131 (284)
T d2astb2 81 LRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWC 131 (284)
T ss_dssp CBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCC
T ss_pred cCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccc
Confidence 7665 4455667777777777777766654321 11345667777776665
No 20
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.52 E-value=5.2e-14 Score=116.26 Aligned_cols=117 Identities=21% Similarity=0.252 Sum_probs=66.0
Q ss_pred cEEEecCCcCcCCCchhhcCCCCccEEEecCCcCCCCCccccCCCCCcEEEccCCCCCCCCcccCCCCCCCEEEeeCCCC
Q 006185 42 QALFLQKNHLLVIPDPFFQGMKDLKVLDLGGIRMVSPPSSLSFLSNLRTLRLDYCNHLPDLSLIGELSGLEILDLSKSDV 121 (657)
Q Consensus 42 ~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~~~~~lp~~~~~l~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~i 121 (657)
|+|++++|.++.++. +..+++|++|++++|.++++|..++.+++|++|++++|. ++..+.++++++|++|++++|.+
T Consensus 1 R~L~Ls~n~l~~l~~--l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~-i~~l~~~~~l~~L~~L~l~~N~i 77 (124)
T d1dcea3 1 RVLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNA-LENVDGVANLPRLQELLLCNNRL 77 (124)
T ss_dssp SEEECTTSCCSSCCC--GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSC-CCCCGGGTTCSSCCEEECCSSCC
T ss_pred CEEEcCCCCCCCCcc--cccCCCCCEEECCCCccCcchhhhhhhhccccccccccc-ccccCccccccccCeEECCCCcc
Confidence 456666666665554 456666666666666666666666666666666666665 33334466666666666666666
Q ss_pred Ccccc--cccCCCCCCEEEccCCCCCC---CCchhHhhcCccCcEE
Q 006185 122 NEIPV--SFGRLSHLRLLDLTDCYNLE---LIPPGVLSRLRKLEEL 162 (657)
Q Consensus 122 ~~lp~--~i~~l~~L~~L~l~~c~~~~---~~~~~~~~~l~~L~~L 162 (657)
+.+|. .+..+++|++|+++++. +. ..+..++..+++|+.|
T Consensus 78 ~~~~~~~~l~~~~~L~~L~l~~N~-i~~~~~~~~~l~~~lp~L~~L 122 (124)
T d1dcea3 78 QQSAAIQPLVSCPRLVLLNLQGNS-LCQEEGIQERLAEMLPSVSSI 122 (124)
T ss_dssp CSSSTTGGGGGCTTCCEEECTTSG-GGGSSSCTTHHHHHCTTCSEE
T ss_pred CCCCCchhhcCCCCCCEEECCCCc-CCcCccHHHHHHHHCcCcceE
Confidence 65542 35556666666666532 22 2223333445555544
No 21
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=3.5e-15 Score=143.92 Aligned_cols=190 Identities=15% Similarity=0.131 Sum_probs=125.9
Q ss_pred ccccceEEEeecCCCceEEeeccccccccccccccEEeccccccccccccccCCCCCCCCccEEEEecCCCcccccchhH
Q 006185 292 DFNELMFLYIFGCNEMKCLLNSLERTQRVTLRKLEWLFIRENQNFVEICHGQLPAGCLSNVKRLDVVGCGSMLKILPSHL 371 (657)
Q Consensus 292 ~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~p~~~ 371 (657)
...+|++|++++|. +. ..........+++|++|.+++|. +.+..... .+.+++|++|++++|..+++.....+
T Consensus 44 ~~~~L~~LdLs~~~-i~---~~~l~~l~~~c~~L~~L~L~~~~-l~~~~~~~--l~~~~~L~~L~Ls~c~~itd~~l~~l 116 (284)
T d2astb2 44 SPFRVQHMDLSNSV-IE---VSTLHGILSQCSKLQNLSLEGLR-LSDPIVNT--LAKNSNLVRLNLSGCSGFSEFALQTL 116 (284)
T ss_dssp CCBCCCEEECTTCE-EC---HHHHHHHHTTBCCCSEEECTTCB-CCHHHHHH--HTTCTTCSEEECTTCBSCCHHHHHHH
T ss_pred cCCCCCEEECCCCc-cC---HHHHHHHHHhCCCcccccccccC-CCcHHHHH--HhcCCCCcCccccccccccccccchh
Confidence 35789999998882 22 11111134468999999999985 33221111 23678999999999999887554555
Q ss_pred HHhcccCcEEEEcccccceeeeecccccccccc-cccCCcccEEecCCCc-CcccccCCCCcccccCCccEEEeccCccc
Q 006185 372 VQSFQNLQRLMVESCELLVSVFEIERVNIAKEE-TELFSSLEKLTLIDLP-RMTDIWKGDTQFVSLHNLKKVRVEECDEL 449 (657)
Q Consensus 372 ~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~~~~-~~~~~~L~~L~l~~c~-~L~~l~~~~~~~~~~~~L~~L~i~~C~~L 449 (657)
+..+++|++|++++|..+++-. . ... ...++.|+.|++++|. .+++-. ...-...+|+|++|++++|+.+
T Consensus 117 ~~~~~~L~~L~ls~c~~~~~~~----~---~~~~~~~~~~L~~L~l~~~~~~i~~~~-l~~l~~~~~~L~~L~L~~~~~i 188 (284)
T d2astb2 117 LSSCSRLDELNLSWCFDFTEKH----V---QVAVAHVSETITQLNLSGYRKNLQKSD-LSTLVRRCPNLVHLDLSDSVML 188 (284)
T ss_dssp HHHCTTCCEEECCCCTTCCHHH----H---HHHHHHSCTTCCEEECCSCGGGSCHHH-HHHHHHHCTTCSEEECTTCTTC
T ss_pred hHHHHhcccccccccccccccc----c---hhhhcccccccchhhhccccccccccc-ccccccccccccccccccccCC
Confidence 6789999999999998765320 0 011 1235789999999874 344310 0111235789999999999888
Q ss_pred ccccccccccccchhhhhhhcccccceeecccccCCCCCCCCCCccEEEEecCCCcceecccchhhcccCCcEEEEecC
Q 006185 450 RQVFPANLGKKAAAEEMVLYRNRRYQIHIHATTSTSSPTPSLGNLVSITIRGCGKLRNLFTTSMVKSLVRLESLEVSSC 528 (657)
Q Consensus 450 ~~~~~~~l~~~~~L~~l~l~~~~~l~~~~~~~~~~~~~~~~~~~L~~L~i~~c~~L~~l~~~~~~~~l~~L~~L~i~~C 528 (657)
++.....+ ..+++|++|++++|.++++-.... +..+++|++|++++|
T Consensus 189 td~~~~~l-------------------------------~~~~~L~~L~L~~C~~i~~~~l~~-L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 189 KNDCFQEF-------------------------------FQLNYLQHLSLSRCYDIIPETLLE-LGEIPTLKTLQVFGI 235 (284)
T ss_dssp CGGGGGGG-------------------------------GGCTTCCEEECTTCTTCCGGGGGG-GGGCTTCCEEECTTS
T ss_pred Cchhhhhh-------------------------------cccCcCCEEECCCCCCCChHHHHH-HhcCCCCCEEeeeCC
Confidence 76533333 256778888888888877653333 356788888888887
No 22
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=1.2e-14 Score=126.58 Aligned_cols=124 Identities=16% Similarity=0.148 Sum_probs=67.4
Q ss_pred CCCCCcEEEecCCcCcCCCchhhcCCCCccEEEecCCcCCCCCccccCCCCCcEEEccCCCCCCCCc-ccCCCCCCCEEE
Q 006185 37 ECPKLQALFLQKNHLLVIPDPFFQGMKDLKVLDLGGIRMVSPPSSLSFLSNLRTLRLDYCNHLPDLS-LIGELSGLEILD 115 (657)
Q Consensus 37 ~~~~L~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~~~~~lp~~~~~l~~L~~L~l~~~~~~~~~~-~~~~l~~L~~L~ 115 (657)
++.++|+|++++|.+..++. .+..+++|++|++++|++++++ .+..+++|++|++++|.....+. .+..+++|++|+
T Consensus 16 n~~~lr~L~L~~n~I~~i~~-~~~~l~~L~~L~Ls~N~i~~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~ 93 (162)
T d1a9na_ 16 NAVRDRELDLRGYKIPVIEN-LGATLDQFDAIDFSDNEIRKLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 93 (162)
T ss_dssp CTTSCEEEECTTSCCCSCCC-GGGGTTCCSEEECCSSCCCEEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CcCcCcEEECCCCCCCccCc-cccccccCCEEECCCCCCCccC-CcccCcchhhhhcccccccCCCccccccccccccce
Confidence 44455555555555555543 2345555666666665555542 35555566666666655333332 234566666666
Q ss_pred eeCCCCCcccc--cccCCCCCCEEEccCCCCCCCCch---hHhhcCccCcEEE
Q 006185 116 LSKSDVNEIPV--SFGRLSHLRLLDLTDCYNLELIPP---GVLSRLRKLEELY 163 (657)
Q Consensus 116 l~~~~i~~lp~--~i~~l~~L~~L~l~~c~~~~~~~~---~~~~~l~~L~~L~ 163 (657)
+++|.++.+++ .+..+++|++|++++| .+...|. .++..+++|+.|+
T Consensus 94 L~~N~i~~~~~l~~l~~l~~L~~L~l~~N-~i~~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 94 LTNNSLVELGDLDPLASLKSLTYLCILRN-PVTNKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp CCSCCCCCGGGGGGGGGCTTCCEEECCSS-GGGGSTTHHHHHHHHCTTCSEET
T ss_pred eccccccccccccccccccccchhhcCCC-ccccccchHHHHHHHCCCcCeeC
Confidence 66666655543 3556666666666663 2333331 2356677777665
No 23
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=2.7e-13 Score=127.52 Aligned_cols=191 Identities=18% Similarity=0.209 Sum_probs=108.2
Q ss_pred cEEEccCCCccccCCCCCCCCCcEEEecCCcCcCCCchhhcCCCCccEEEecCCcCCC-C-CccccCCCCCcEEEccCCC
Q 006185 20 TGISLMFNDIHEVPDGLECPKLQALFLQKNHLLVIPDPFFQGMKDLKVLDLGGIRMVS-P-PSSLSFLSNLRTLRLDYCN 97 (657)
Q Consensus 20 ~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~~~~~-l-p~~~~~l~~L~~L~l~~~~ 97 (657)
++++.++..++++|+.+. +++++|++++|.+..++...|.++++|++|++++|.+.. + +..|.++.+++++.+..+.
T Consensus 11 ~~i~c~~~~l~~iP~~l~-~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n 89 (242)
T d1xwdc1 11 RVFLCQESKVTEIPSDLP-RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN 89 (242)
T ss_dssp SEEEEESCSCSSCCSCSC-SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCT
T ss_pred CEEEEeCCCCCCcCCCCC-CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccc
Confidence 566677766777776442 467777777777777776666777777777777776654 2 2356677777777766544
Q ss_pred CCC--CCcccCCCCCCCEEEeeCCCCCcccc--cccCCCCCCEEEccCCCCCCCCchhHhhcCc-cCcEEEcccCccccc
Q 006185 98 HLP--DLSLIGELSGLEILDLSKSDVNEIPV--SFGRLSHLRLLDLTDCYNLELIPPGVLSRLR-KLEELYMSHSFCHWQ 172 (657)
Q Consensus 98 ~~~--~~~~~~~l~~L~~L~l~~~~i~~lp~--~i~~l~~L~~L~l~~c~~~~~~~~~~~~~l~-~L~~L~l~~~~~~~~ 172 (657)
.+. .+..+.++++|++++++++.++..+. .+..+..+..+...+ ..+..++...+..+. .++.|+++++.+.
T Consensus 90 ~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n-~~l~~i~~~~~~~~~~~l~~L~l~~n~l~-- 166 (242)
T d1xwdc1 90 NLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDN-INIHTIERNSFVGLSFESVILWLNKNGIQ-- 166 (242)
T ss_dssp TCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESC-TTCCEECTTSSTTSBSSCEEEECCSSCCC--
T ss_pred cccccccccccccccccccccchhhhcccccccccccccccccccccc-cccccccccccccccccceeeeccccccc--
Confidence 232 23556777777777777776665443 122333333333333 445555444344443 5666776665443
Q ss_pred cccccccccccchhhhcCCCCccEEE-eecCCCccCCCC--CCCCCccEEEEEEc
Q 006185 173 FESEEDTRSNAKFIELGALSRLTSLH-IDIPKGEIMPSD--MSLPNLTSFSITIG 224 (657)
Q Consensus 173 ~~g~~~~~~~~~~~~l~~l~~L~~L~-l~~~~~~~~~~~--~~l~~L~~L~l~~~ 224 (657)
..........+++.+. +.++.++.++.. .++++|+.|+++++
T Consensus 167 ----------~i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N 211 (242)
T d1xwdc1 167 ----------EIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRT 211 (242)
T ss_dssp ----------EECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTS
T ss_pred ----------ccccccccchhhhccccccccccccccHHHhcCCCCCCEEECCCC
Confidence 2222233344444443 344555555543 45566666666544
No 24
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=3.5e-14 Score=123.55 Aligned_cols=127 Identities=17% Similarity=0.141 Sum_probs=72.6
Q ss_pred CCCCCCCCCccEEEccCCCccccCCCC-CCCCCcEEEecCCcCcCCCchhhcCCCCccEEEecCCcCCCCCcc-ccCCCC
Q 006185 10 WPSINTFEDLTGISLMFNDIHEVPDGL-ECPKLQALFLQKNHLLVIPDPFFQGMKDLKVLDLGGIRMVSPPSS-LSFLSN 87 (657)
Q Consensus 10 ~~~~~~~~~L~~L~l~~~~~~~l~~~~-~~~~L~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~~~~~lp~~-~~~l~~ 87 (657)
.|++..+.++|.|++++|.|+.++... .+++|++|++++|.+.+++. |..+++|++|++++|+++.++.. +..+++
T Consensus 11 ~~~~~n~~~lr~L~L~~n~I~~i~~~~~~l~~L~~L~Ls~N~i~~l~~--~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~ 88 (162)
T d1a9na_ 11 AAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDG--FPLLRRLKTLLVNNNRICRIGEGLDQALPD 88 (162)
T ss_dssp SCEEECTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEECC--CCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hHhccCcCcCcEEECCCCCCCccCccccccccCCEEECCCCCCCccCC--cccCcchhhhhcccccccCCCccccccccc
Confidence 344445556666666666666665443 45666666666666665543 45666666666666666655543 245666
Q ss_pred CcEEEccCCCCCCC--CcccCCCCCCCEEEeeCCCCCcccc----cccCCCCCCEEE
Q 006185 88 LRTLRLDYCNHLPD--LSLIGELSGLEILDLSKSDVNEIPV----SFGRLSHLRLLD 138 (657)
Q Consensus 88 L~~L~l~~~~~~~~--~~~~~~l~~L~~L~l~~~~i~~lp~----~i~~l~~L~~L~ 138 (657)
|++|++++|..... ...+..+++|++|++++|.++..|. .+..+++|++||
T Consensus 89 L~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 89 LTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp CCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEET
T ss_pred cccceeccccccccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeC
Confidence 66666666652221 2345556666666666666655543 355566666664
No 25
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.45 E-value=8.6e-14 Score=125.55 Aligned_cols=133 Identities=20% Similarity=0.245 Sum_probs=110.5
Q ss_pred CCCCCCCCccEEEccCCCccccCCCCCCCCCcEEEecCCcCc-CCCchhhcCCCCccEEEecCCcCCCC-CccccCCCCC
Q 006185 11 PSINTFEDLTGISLMFNDIHEVPDGLECPKLQALFLQKNHLL-VIPDPFFQGMKDLKVLDLGGIRMVSP-PSSLSFLSNL 88 (657)
Q Consensus 11 ~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~-~~~~~~~~~l~~Lr~L~L~~~~~~~l-p~~~~~l~~L 88 (657)
|+.+.+ ..++++.+++.+++||+.+. +++++|++++|.+. .++...|.++++|++|++++|.+..+ +..+..+++|
T Consensus 3 P~~C~C-~~~~v~Cs~~~L~~iP~~lp-~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L 80 (192)
T d1w8aa_ 3 PAMCHC-EGTTVDCTGRGLKEIPRDIP-LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHI 80 (192)
T ss_dssp CTTSEE-ETTEEECTTSCCSSCCSCCC-TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTC
T ss_pred CCCCEE-cCCEEEEeCCCcCccCCCCC-CCCCEEEeCCCCCcccccccccCCCceEeeeecccccccccccccccccccc
Confidence 333444 34689999999999998663 68999999999997 47777789999999999999999765 5678899999
Q ss_pred cEEEccCCCCCCC-CcccCCCCCCCEEEeeCCCCCccccc-ccCCCCCCEEEccCCCCC
Q 006185 89 RTLRLDYCNHLPD-LSLIGELSGLEILDLSKSDVNEIPVS-FGRLSHLRLLDLTDCYNL 145 (657)
Q Consensus 89 ~~L~l~~~~~~~~-~~~~~~l~~L~~L~l~~~~i~~lp~~-i~~l~~L~~L~l~~c~~~ 145 (657)
++|++++|..... +..|.++++|++|++++|.++.+|.. +..+++|++|+++++...
T Consensus 81 ~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 81 QELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred ceeeeccccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccc
Confidence 9999999985544 46789999999999999999988765 789999999999995433
No 26
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.45 E-value=1.6e-13 Score=113.21 Aligned_cols=116 Identities=16% Similarity=0.145 Sum_probs=98.4
Q ss_pred cEEEccCCCccccCCCCCCCCCcEEEecCCcCcCCCchhhcCCCCccEEEecCCcCCCCCccccCCCCCcEEEccCCCCC
Q 006185 20 TGISLMFNDIHEVPDGLECPKLQALFLQKNHLLVIPDPFFQGMKDLKVLDLGGIRMVSPPSSLSFLSNLRTLRLDYCNHL 99 (657)
Q Consensus 20 ~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~~~~~lp~~~~~l~~L~~L~l~~~~~~ 99 (657)
|+|++++|.++.++....+++|++|++++|.+.++|+. |+.+++|++|++++|.++.+| .+.++++|++|++++|...
T Consensus 1 R~L~Ls~n~l~~l~~l~~l~~L~~L~ls~N~l~~lp~~-~~~l~~L~~L~l~~N~i~~l~-~~~~l~~L~~L~l~~N~i~ 78 (124)
T d1dcea3 1 RVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQASDNALENVD-GVANLPRLQELLLCNNRLQ 78 (124)
T ss_dssp SEEECTTSCCSSCCCGGGGTTCCEEECCSSCCCCCCGG-GGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCSSCCC
T ss_pred CEEEcCCCCCCCCcccccCCCCCEEECCCCccCcchhh-hhhhhcccccccccccccccC-ccccccccCeEECCCCccC
Confidence 78999999999998755899999999999999999876 689999999999999999887 4899999999999999844
Q ss_pred CC--CcccCCCCCCCEEEeeCCCCCccc---cc-ccCCCCCCEE
Q 006185 100 PD--LSLIGELSGLEILDLSKSDVNEIP---VS-FGRLSHLRLL 137 (657)
Q Consensus 100 ~~--~~~~~~l~~L~~L~l~~~~i~~lp---~~-i~~l~~L~~L 137 (657)
.. +..++++++|++|++++|.++..+ .. +..+++|+.|
T Consensus 79 ~~~~~~~l~~~~~L~~L~l~~N~i~~~~~~~~~l~~~lp~L~~L 122 (124)
T d1dcea3 79 QSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 122 (124)
T ss_dssp SSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEE
T ss_pred CCCCchhhcCCCCCCEEECCCCcCCcCccHHHHHHHHCcCcceE
Confidence 33 357889999999999999887543 22 3446777765
No 27
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44 E-value=3.3e-13 Score=126.93 Aligned_cols=200 Identities=17% Similarity=0.182 Sum_probs=147.7
Q ss_pred CCCCCCCCCCCCCCCccEEEccCCCccccCCCC--CCCCCcEEEecCCcCc-CCCchhhcCCCCccEEEecCC-cCCC-C
Q 006185 4 GVELKDWPSINTFEDLTGISLMFNDIHEVPDGL--ECPKLQALFLQKNHLL-VIPDPFFQGMKDLKVLDLGGI-RMVS-P 78 (657)
Q Consensus 4 ~~~l~~~~~~~~~~~L~~L~l~~~~~~~l~~~~--~~~~L~~L~l~~~~~~-~~~~~~~~~l~~Lr~L~L~~~-~~~~-l 78 (657)
+.+++++|+ .-.++++.|++++|.++.++... ++++|++|++++|.+. .++...|.+++.++++.+..+ ++.. .
T Consensus 17 ~~~l~~iP~-~l~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~ 95 (242)
T d1xwdc1 17 ESKVTEIPS-DLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYIN 95 (242)
T ss_dssp SCSCSSCCS-CSCSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEEC
T ss_pred CCCCCCcCC-CCCCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccc
Confidence 346788884 22368999999999999998764 8999999999999887 467777899999999998764 5654 4
Q ss_pred CccccCCCCCcEEEccCCCCCCCC--cccCCCCCCCEEEeeCCCCCccccc-ccCC-CCCCEEEccCCCCCCCCchhHhh
Q 006185 79 PSSLSFLSNLRTLRLDYCNHLPDL--SLIGELSGLEILDLSKSDVNEIPVS-FGRL-SHLRLLDLTDCYNLELIPPGVLS 154 (657)
Q Consensus 79 p~~~~~l~~L~~L~l~~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~lp~~-i~~l-~~L~~L~l~~c~~~~~~~~~~~~ 154 (657)
+..|.++++|++|+++++.....+ ..+..+..+..+...++.+..++.. +..+ ..++.|++.+ +.++.++.. ..
T Consensus 96 ~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~-n~l~~i~~~-~~ 173 (242)
T d1xwdc1 96 PEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNK-NGIQEIHNC-AF 173 (242)
T ss_dssp TTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCS-SCCCEECTT-TT
T ss_pred cccccccccccccccchhhhcccccccccccccccccccccccccccccccccccccccceeeeccc-ccccccccc-cc
Confidence 567899999999999999833332 3445566677777777778876543 5555 4788999988 567777776 45
Q ss_pred cCccCcEEE-cccCccccccccccccccccc-hhhhcCCCCccEEEeecCCCccCCCCCCCCCccEE
Q 006185 155 RLRKLEELY-MSHSFCHWQFESEEDTRSNAK-FIELGALSRLTSLHIDIPKGEIMPSDMSLPNLTSF 219 (657)
Q Consensus 155 ~l~~L~~L~-l~~~~~~~~~~g~~~~~~~~~-~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~L~~L 219 (657)
+..+++++. +.++.+. .. ...+.++++|+.|++++|++..++.. .+.+|..|
T Consensus 174 ~~~~l~~~~~l~~n~l~------------~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~-~~~~l~~L 227 (242)
T d1xwdc1 174 NGTQLDELNLSDNNNLE------------ELPNDVFHGASGPVILDISRTRIHSLPSY-GLENLKKL 227 (242)
T ss_dssp TTCCEEEEECTTCTTCC------------CCCTTTTTTSCCCSEEECTTSCCCCCCSS-SCTTCCEE
T ss_pred cchhhhccccccccccc------------cccHHHhcCCCCCCEEECCCCcCCccCHH-HHcCCccc
Confidence 666766665 4555443 22 23478899999999999999888765 24444444
No 28
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.35 E-value=2.1e-12 Score=116.26 Aligned_cols=125 Identities=20% Similarity=0.192 Sum_probs=101.9
Q ss_pred CcEEEecCCcCcCCCchhhcCCCCccEEEecCCcCCC-C-CccccCCCCCcEEEccCCCCCCC-CcccCCCCCCCEEEee
Q 006185 41 LQALFLQKNHLLVIPDPFFQGMKDLKVLDLGGIRMVS-P-PSSLSFLSNLRTLRLDYCNHLPD-LSLIGELSGLEILDLS 117 (657)
Q Consensus 41 L~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~~~~~-l-p~~~~~l~~L~~L~l~~~~~~~~-~~~~~~l~~L~~L~l~ 117 (657)
.++++.+++.+..+|..+ .+++++|+|++|+++. + +..|.++++|++|++++|..... +..+..+++|++|+++
T Consensus 10 ~~~v~Cs~~~L~~iP~~l---p~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls 86 (192)
T d1w8aa_ 10 GTTVDCTGRGLKEIPRDI---PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TTEEECTTSCCSSCCSCC---CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCEEEEeCCCcCccCCCC---CCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeec
Confidence 467888888888898865 3688999999999864 4 45678899999999998885544 4778889999999999
Q ss_pred CCCCCccccc-ccCCCCCCEEEccCCCCCCCCchhHhhcCccCcEEEcccCcc
Q 006185 118 KSDVNEIPVS-FGRLSHLRLLDLTDCYNLELIPPGVLSRLRKLEELYMSHSFC 169 (657)
Q Consensus 118 ~~~i~~lp~~-i~~l~~L~~L~l~~c~~~~~~~~~~~~~l~~L~~L~l~~~~~ 169 (657)
+|.++.+|.. |.++++|++|++++ +.++.++.+++..+++|++|++++|.+
T Consensus 87 ~N~l~~l~~~~F~~l~~L~~L~L~~-N~l~~i~~~~f~~l~~L~~l~L~~N~~ 138 (192)
T d1w8aa_ 87 ENKIKEISNKMFLGLHQLKTLNLYD-NQISCVMPGSFEHLNSLTSLNLASNPF 138 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCS-SCCCEECTTSSTTCTTCCEEECTTCCB
T ss_pred cccccccCHHHHhCCCcccccccCC-ccccccCHHHhcCCccccccccccccc
Confidence 9999887654 78899999999999 567888877778888899998888754
No 29
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.22 E-value=5.9e-14 Score=126.71 Aligned_cols=103 Identities=23% Similarity=0.310 Sum_probs=63.1
Q ss_pred CCCCCcEEEecCCcCcCCCchhhcCCCCccEEEecCCcCCCCCccccCCCCCcEEEccCCCCCCCCcccCCCCCCCEEEe
Q 006185 37 ECPKLQALFLQKNHLLVIPDPFFQGMKDLKVLDLGGIRMVSPPSSLSFLSNLRTLRLDYCNHLPDLSLIGELSGLEILDL 116 (657)
Q Consensus 37 ~~~~L~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~~~~~lp~~~~~l~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l 116 (657)
.+++|++|++++|.+..++. |.++++|++|++++|.++++|..+..+.+|++|++++|. ++.+..+.++++|++|++
T Consensus 46 ~L~~L~~L~Ls~n~I~~i~~--l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N~-i~~l~~~~~l~~L~~L~L 122 (198)
T d1m9la_ 46 TLKACKHLALSTNNIEKISS--LSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQ-IASLSGIEKLVNLRVLYM 122 (198)
T ss_dssp HTTTCCEEECSEEEESCCCC--HHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSEEE-CCCHHHHHHHHHSSEEEE
T ss_pred cccccceeECcccCCCCccc--ccCCccccChhhccccccccccccccccccccccccccc-cccccccccccccccccc
Confidence 56666666666666666543 566666666666666666666554555566666666665 444445566666666666
Q ss_pred eCCCCCcccc--cccCCCCCCEEEccCC
Q 006185 117 SKSDVNEIPV--SFGRLSHLRLLDLTDC 142 (657)
Q Consensus 117 ~~~~i~~lp~--~i~~l~~L~~L~l~~c 142 (657)
++|.++.++. .+..+++|++|++++|
T Consensus 123 ~~N~i~~~~~~~~l~~l~~L~~L~L~~N 150 (198)
T d1m9la_ 123 SNNKITNWGEIDKLAALDKLEDLLLAGN 150 (198)
T ss_dssp SEEECCCHHHHHHHTTTTTCSEEEECSS
T ss_pred ccchhccccccccccCCCccceeecCCC
Confidence 6666665542 3566666666666663
No 30
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=1.3e-12 Score=135.54 Aligned_cols=384 Identities=17% Similarity=0.099 Sum_probs=206.5
Q ss_pred CCccEEEccCCCccc--cCCCC-CCCCCcEEEecCCcCcCCC----chhhcCCCCccEEEecCCcCCC-----CCcccc-
Q 006185 17 EDLTGISLMFNDIHE--VPDGL-ECPKLQALFLQKNHLLVIP----DPFFQGMKDLKVLDLGGIRMVS-----PPSSLS- 83 (657)
Q Consensus 17 ~~L~~L~l~~~~~~~--l~~~~-~~~~L~~L~l~~~~~~~~~----~~~~~~l~~Lr~L~L~~~~~~~-----lp~~~~- 83 (657)
.+|+.|+++++.+++ +.+.. .++++++|++++|.+++.. ...+..+++|++|+|++|.++. +...+.
T Consensus 2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~ 81 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 81 (460)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred CCCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhc
Confidence 368899999999874 33333 6889999999999876211 2235789999999999998742 233333
Q ss_pred CCCCCcEEEccCCCCCCC------CcccCCCCCCCEEEeeCCCCCc-----cccccc-CCCCCCEEEccCCCCCCCCc--
Q 006185 84 FLSNLRTLRLDYCNHLPD------LSLIGELSGLEILDLSKSDVNE-----IPVSFG-RLSHLRLLDLTDCYNLELIP-- 149 (657)
Q Consensus 84 ~l~~L~~L~l~~~~~~~~------~~~~~~l~~L~~L~l~~~~i~~-----lp~~i~-~l~~L~~L~l~~c~~~~~~~-- 149 (657)
...+|++|++++|. +++ +..+..+++|++|++++|.++. ++..+. .............. .....
T Consensus 82 ~~~~L~~L~L~~n~-it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~~~~~~ 159 (460)
T d1z7xw1 82 PSCKIQKLSLQNCC-LTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCS-LSAASCE 159 (460)
T ss_dssp TTCCCCEEECTTSC-CBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC-CBGGGHH
T ss_pred CCCCCCEEECCCCC-ccccccccccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccc-cchhhhc
Confidence 34579999999998 443 2567889999999999998763 222222 22223344443321 11111
Q ss_pred --hhHhhcCccCcEEEcccCccccccccccccccccchhhhc-CCCCccEEEeecCCCccCCC------CCCCCCccEEE
Q 006185 150 --PGVLSRLRKLEELYMSHSFCHWQFESEEDTRSNAKFIELG-ALSRLTSLHIDIPKGEIMPS------DMSLPNLTSFS 220 (657)
Q Consensus 150 --~~~~~~l~~L~~L~l~~~~~~~~~~g~~~~~~~~~~~~l~-~l~~L~~L~l~~~~~~~~~~------~~~l~~L~~L~ 220 (657)
...+.....++.++++++....... ......+. .......+.+..+....... ......++.+.
T Consensus 160 ~~~~~l~~~~~~~~~~ls~~~~~~~~~-------~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~ 232 (460)
T d1z7xw1 160 PLASVLRAKPDFKELTVSNNDINEAGV-------RVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELA 232 (460)
T ss_dssp HHHHHHHHCTTCCEEECCSSBCHHHHH-------HHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEE
T ss_pred ccccccccccccccccccccccccccc-------cccccccccccccccccccccccccchhhhcccccccccccccccc
Confidence 1113456778888887664321000 01111121 22345556665554321110 02345667777
Q ss_pred EEEcCccChhhHHHHHhhcc-cccCcceEEeecccchhh----hHHHHHHHHccccEEEEeeccccccc-cccc---ccc
Q 006185 221 ITIGEEDTLNDFIELFLENF-NKRCSRAMGLSQDMRISA----LHSWIKNLLLRSEILALIEVNDLENI-FSNL---AND 291 (657)
Q Consensus 221 l~~~~~~~~~~~~~~~~~~~-~~~~l~~l~l~~~~~~~~----l~~~~~~~~~~L~~L~L~~~~~l~~~-~~~l---~~~ 291 (657)
+..+.... ........... ....++.+++.++..... ...++.. .+.++.++++++. +.+. ...+ ...
T Consensus 233 ~~~n~~~~-~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~-~~~l~~l~l~~n~-i~~~~~~~l~~~l~~ 309 (460)
T d1z7xw1 233 LGSNKLGD-VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRA-KESLKELSLAGNE-LGDEGARLLCETLLE 309 (460)
T ss_dssp CCSSBCHH-HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHH-CTTCCEEECTTCC-CHHHHHHHHHHHHTS
T ss_pred hhhccccc-cccchhhcccccccccccccccccccccccccccccccccc-ccccccccccccc-ccccccchhhccccc
Confidence 65442111 11111111111 235677777777632221 2222222 2678888887663 2211 1110 011
Q ss_pred ccccceEEEeecCCCceEEeeccccccccccccccEEeccccccccccccccCCC---CCCCCccEEEEecCCCcccccc
Q 006185 292 DFNELMFLYIFGCNEMKCLLNSLERTQRVTLRKLEWLFIRENQNFVEICHGQLPA---GCLSNVKRLDVVGCGSMLKILP 368 (657)
Q Consensus 292 ~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~---~~~~~L~~L~l~~c~~l~~~~p 368 (657)
....|+.+.++++. +...............++|++|+++++. +.+-....++. ...+.|++|++++| .+++...
T Consensus 310 ~~~~L~~l~l~~~~-l~~~~~~~l~~~~~~~~~L~~L~Ls~N~-i~~~g~~~l~~~l~~~~~~L~~L~Ls~n-~i~~~~~ 386 (460)
T d1z7xw1 310 PGCQLESLWVKSCS-FTAACCSHFSSVLAQNRFLLELQISNNR-LEDAGVRELCQGLGQPGSVLRVLWLADC-DVSDSSC 386 (460)
T ss_dssp TTCCCCEEECTTSC-CBGGGHHHHHHHHHHCSSCCEEECCSSB-CHHHHHHHHHHHHTSTTCCCCEEECTTS-CCCHHHH
T ss_pred cccccccccccccc-hhhhhhhhcccccccccchhhhheeeec-ccCcccchhhhhhhcccCCCCEEECCCC-CCChHHH
Confidence 24578899998883 3211000000022345689999999874 43211011111 13567999999998 5665322
Q ss_pred hhH---HHhcccCcEEEEcccccceeeeecccccccccccc-cCCcccEEecCCCc
Q 006185 369 SHL---VQSFQNLQRLMVESCELLVSVFEIERVNIAKEETE-LFSSLEKLTLIDLP 420 (657)
Q Consensus 369 ~~~---~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~~-~~~~L~~L~l~~c~ 420 (657)
..+ ...+++|++|++++. .+.. .+.....+.+. .-..|+.|.+.++.
T Consensus 387 ~~l~~~l~~~~~L~~L~Ls~N-~i~~----~g~~~l~~~l~~~~~~L~~l~l~~~~ 437 (460)
T d1z7xw1 387 SSLAATLLANHSLRELDLSNN-CLGD----AGILQLVESVRQPGCLLEQLVLYDIY 437 (460)
T ss_dssp HHHHHHHHHCCCCCEEECCSS-SCCH----HHHHHHHHHHTSTTCCCCEEECTTCC
T ss_pred HHHHHHHhcCCCCCEEECCCC-cCCH----HHHHHHHHHHHhCCCccCEEECCCCC
Confidence 222 346799999999984 3322 11111112222 23479999999865
No 31
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.10 E-value=2.6e-13 Score=122.43 Aligned_cols=111 Identities=20% Similarity=0.139 Sum_probs=93.8
Q ss_pred CCCCCCCccEEEccCCCccccCCCCCCCCCcEEEecCCcCcCCCchhhcCCCCccEEEecCCcCCCCCccccCCCCCcEE
Q 006185 12 SINTFEDLTGISLMFNDIHEVPDGLECPKLQALFLQKNHLLVIPDPFFQGMKDLKVLDLGGIRMVSPPSSLSFLSNLRTL 91 (657)
Q Consensus 12 ~~~~~~~L~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~~~~~lp~~~~~l~~L~~L 91 (657)
+++.+++|++|++++|.|+.++....+++|++|++++|.+.+++.. +..+++|++|++++|+++.++ .+.++++|++|
T Consensus 43 sl~~L~~L~~L~Ls~n~I~~i~~l~~l~~L~~L~Ls~N~i~~i~~~-~~~~~~L~~L~l~~N~i~~l~-~~~~l~~L~~L 120 (198)
T d1m9la_ 43 TLSTLKACKHLALSTNNIEKISSLSGMENLRILSLGRNLIKKIENL-DAVADTLEELWISYNQIASLS-GIEKLVNLRVL 120 (198)
T ss_dssp HHHHTTTCCEEECSEEEESCCCCHHHHTTCCEEECCEEEECSCSSH-HHHHHHCCEEECSEEECCCHH-HHHHHHHSSEE
T ss_pred HHhcccccceeECcccCCCCcccccCCccccChhhccccccccccc-ccccccccccccccccccccc-ccccccccccc
Confidence 3667899999999999999997544899999999999999888763 456778999999999998874 58889999999
Q ss_pred EccCCCCCCCC--cccCCCCCCCEEEeeCCCCCcc
Q 006185 92 RLDYCNHLPDL--SLIGELSGLEILDLSKSDVNEI 124 (657)
Q Consensus 92 ~l~~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~l 124 (657)
++++|.....+ ..++.+++|++|++++|.+...
T Consensus 121 ~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~ 155 (198)
T d1m9la_ 121 YMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp EESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHH
T ss_pred ccccchhccccccccccCCCccceeecCCCccccC
Confidence 99999833323 5689999999999999977643
No 32
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.07 E-value=3.7e-10 Score=96.89 Aligned_cols=110 Identities=15% Similarity=0.139 Sum_probs=67.9
Q ss_pred CCCCCCCccEEEccCCCccccCCCC-CCCCCcEEEecCC-cCcCCCchhhcCCCCccEEEecCCcCCCCC-ccccCCCCC
Q 006185 12 SINTFEDLTGISLMFNDIHEVPDGL-ECPKLQALFLQKN-HLLVIPDPFFQGMKDLKVLDLGGIRMVSPP-SSLSFLSNL 88 (657)
Q Consensus 12 ~~~~~~~L~~L~l~~~~~~~l~~~~-~~~~L~~L~l~~~-~~~~~~~~~~~~l~~Lr~L~L~~~~~~~lp-~~~~~l~~L 88 (657)
..+.+.....++.+++.+.++|..+ .+++|++|+++++ .+..++...|.++++|++|++++|+++.++ ..|..+++|
T Consensus 3 ~~C~c~~~~~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L 82 (156)
T d2ifga3 3 DACCPHGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRL 82 (156)
T ss_dssp SSSCCSSSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCC
T ss_pred CCCCcCCCCeEEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccc
Confidence 3444555566777777776666655 6677777777655 366676666777777777777777776653 446666666
Q ss_pred cEEEccCCCCCCCCcccCCCCCCCEEEeeCCCC
Q 006185 89 RTLRLDYCNHLPDLSLIGELSGLEILDLSKSDV 121 (657)
Q Consensus 89 ~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~i 121 (657)
++|+|++|...+.|..+....+|++|++++|.+
T Consensus 83 ~~L~Ls~N~l~~l~~~~~~~~~l~~L~L~~Np~ 115 (156)
T d2ifga3 83 SRLNLSFNALESLSWKTVQGLSLQELVLSGNPL 115 (156)
T ss_dssp CEEECCSSCCSCCCSTTTCSCCCCEEECCSSCC
T ss_pred cceeccCCCCcccChhhhccccccccccCCCcc
Confidence 666666666444443333333455555555544
No 33
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.06 E-value=5e-12 Score=130.99 Aligned_cols=366 Identities=16% Similarity=0.095 Sum_probs=187.6
Q ss_pred CCcEEEecCCcCcCCC-chhhcCCCCccEEEecCCcCC-----CCCccccCCCCCcEEEccCCCCCCCC------cccC-
Q 006185 40 KLQALFLQKNHLLVIP-DPFFQGMKDLKVLDLGGIRMV-----SPPSSLSFLSNLRTLRLDYCNHLPDL------SLIG- 106 (657)
Q Consensus 40 ~L~~L~l~~~~~~~~~-~~~~~~l~~Lr~L~L~~~~~~-----~lp~~~~~l~~L~~L~l~~~~~~~~~------~~~~- 106 (657)
+|++|+++++++++.. ..++..++++|+|+|++|+++ .+...+..+++|++|++++|. +++. ..+.
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~-i~~~~~~~l~~~l~~ 81 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNE-LGDVGVHCVLQGLQT 81 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCC-CHHHHHHHHHHTTCS
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCc-CChHHHHHHHHHHhc
Confidence 6889999999987321 334678899999999999886 345667889999999999987 4321 2222
Q ss_pred CCCCCCEEEeeCCCCCc-----ccccccCCCCCCEEEccCCCCCCCCchhHhh-----cCccCcEEEcccCccccccccc
Q 006185 107 ELSGLEILDLSKSDVNE-----IPVSFGRLSHLRLLDLTDCYNLELIPPGVLS-----RLRKLEELYMSHSFCHWQFESE 176 (657)
Q Consensus 107 ~l~~L~~L~l~~~~i~~-----lp~~i~~l~~L~~L~l~~c~~~~~~~~~~~~-----~l~~L~~L~l~~~~~~~~~~g~ 176 (657)
...+|++|++++|.++. ++..+..+++|++|++++|. ++..+...+. .................
T Consensus 82 ~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~-i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~----- 155 (460)
T d1z7xw1 82 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNL-LGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSA----- 155 (460)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSB-CHHHHHHHHHHHHTSTTCCCCEEECTTSCCBG-----
T ss_pred CCCCCCEEECCCCCccccccccccchhhcccccccccccccc-chhhhhhhhhhcccccccccccccccccccch-----
Confidence 23579999999998873 45667888899999998853 4332211111 11222333332222111
Q ss_pred cccccccchhhhcCCCCccEEEeecCCCccC-----CCC--CCCCCccEEEEEEcCccChhhHHHHHhhcccccCcceEE
Q 006185 177 EDTRSNAKFIELGALSRLTSLHIDIPKGEIM-----PSD--MSLPNLTSFSITIGEEDTLNDFIELFLENFNKRCSRAMG 249 (657)
Q Consensus 177 ~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~-----~~~--~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 249 (657)
.........+.....++.+.++++..... ... ........+.+..+....
T Consensus 156 --~~~~~~~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~--------------------- 212 (460)
T d1z7xw1 156 --ASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTS--------------------- 212 (460)
T ss_dssp --GGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBT---------------------
T ss_pred --hhhcccccccccccccccccccccccccccccccccccccccccccccccccccccc---------------------
Confidence 01112334445556667776665443110 000 001122233222211000
Q ss_pred eecccchhhhHHHHHHHHccccEEEEeecccccc----ccccccccccccceEEEeecCCCceEEeeccccccccccccc
Q 006185 250 LSQDMRISALHSWIKNLLLRSEILALIEVNDLEN----IFSNLANDDFNELMFLYIFGCNEMKCLLNSLERTQRVTLRKL 325 (657)
Q Consensus 250 l~~~~~~~~l~~~~~~~~~~L~~L~L~~~~~l~~----~~~~l~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~L 325 (657)
..+......... ...++.+.+.++..... .... .....+.++.+++++|. +...............+.+
T Consensus 213 ----~~~~~~~~~l~~-~~~~~~l~~~~n~~~~~~~~~~~~~-~~~~~~~l~~l~l~~n~-i~~~~~~~~~~~l~~~~~l 285 (460)
T d1z7xw1 213 ----DNCRDLCGIVAS-KASLRELALGSNKLGDVGMAELCPG-LLHPSSRLRTLWIWECG-ITAKGCGDLCRVLRAKESL 285 (460)
T ss_dssp ----THHHHHHHHHHH-CTTCCEEECCSSBCHHHHHHHHHHH-HTSTTCCCCEEECTTSC-CCHHHHHHHHHHHHHCTTC
T ss_pred ----hhhhcccccccc-cccccccchhhccccccccchhhcc-ccccccccccccccccc-ccccccccccccccccccc
Confidence 000111111111 25566666655422111 1111 11234667777777772 2211100000022346677
Q ss_pred cEEeccccccccccccccC---CCCCCCCccEEEEecCCCcccccchh---HHHhcccCcEEEEcccccceeeeeccccc
Q 006185 326 EWLFIRENQNFVEICHGQL---PAGCLSNVKRLDVVGCGSMLKILPSH---LVQSFQNLQRLMVESCELLVSVFEIERVN 399 (657)
Q Consensus 326 ~~L~l~~~~~l~~~~~~~~---~~~~~~~L~~L~l~~c~~l~~~~p~~---~~~~~~~L~~L~l~~c~~l~~~~~~~~~~ 399 (657)
+.+++++++ +.+.....+ .....+.|+.+.+++|. +....... .....++|++|+++++. +.. .+..
T Consensus 286 ~~l~l~~n~-i~~~~~~~l~~~l~~~~~~L~~l~l~~~~-l~~~~~~~l~~~~~~~~~L~~L~Ls~N~-i~~----~g~~ 358 (460)
T d1z7xw1 286 KELSLAGNE-LGDEGARLLCETLLEPGCQLESLWVKSCS-FTAACCSHFSSVLAQNRFLLELQISNNR-LED----AGVR 358 (460)
T ss_dssp CEEECTTCC-CHHHHHHHHHHHHTSTTCCCCEEECTTSC-CBGGGHHHHHHHHHHCSSCCEEECCSSB-CHH----HHHH
T ss_pred ccccccccc-ccccccchhhccccccccccccccccccc-hhhhhhhhcccccccccchhhhheeeec-ccC----cccc
Confidence 777777664 211000000 01134678899998874 43322222 22456789999998853 321 1110
Q ss_pred cccccc-ccCCcccEEecCCCcCcccccCC--CCcccccCCccEEEeccCccccc
Q 006185 400 IAKEET-ELFSSLEKLTLIDLPRMTDIWKG--DTQFVSLHNLKKVRVEECDELRQ 451 (657)
Q Consensus 400 ~~~~~~-~~~~~L~~L~l~~c~~L~~l~~~--~~~~~~~~~L~~L~i~~C~~L~~ 451 (657)
...+.+ ...+.|++|++++| .+++.... ......+++|++|++++. .+++
T Consensus 359 ~l~~~l~~~~~~L~~L~Ls~n-~i~~~~~~~l~~~l~~~~~L~~L~Ls~N-~i~~ 411 (460)
T d1z7xw1 359 ELCQGLGQPGSVLRVLWLADC-DVSDSSCSSLAATLLANHSLRELDLSNN-CLGD 411 (460)
T ss_dssp HHHHHHTSTTCCCCEEECTTS-CCCHHHHHHHHHHHHHCCCCCEEECCSS-SCCH
T ss_pred hhhhhhhcccCCCCEEECCCC-CCChHHHHHHHHHHhcCCCCCEEECCCC-cCCH
Confidence 112222 24567999999998 46542100 111224689999999986 5554
No 34
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.90 E-value=8.4e-10 Score=109.06 Aligned_cols=181 Identities=15% Similarity=0.058 Sum_probs=81.8
Q ss_pred CCCCCccEEEccCCCcc-----ccCCCC-CCCCCcEEEecCCcCcCC----Cc------hhhcCCCCccEEEecCCcCCC
Q 006185 14 NTFEDLTGISLMFNDIH-----EVPDGL-ECPKLQALFLQKNHLLVI----PD------PFFQGMKDLKVLDLGGIRMVS 77 (657)
Q Consensus 14 ~~~~~L~~L~l~~~~~~-----~l~~~~-~~~~L~~L~l~~~~~~~~----~~------~~~~~l~~Lr~L~L~~~~~~~ 77 (657)
.....++.|++++|.++ .+.... ..++|+.++++++..... +. ..+...++|++|++++|.++.
T Consensus 28 ~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~ 107 (344)
T d2ca6a1 28 LEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGP 107 (344)
T ss_dssp HHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCT
T ss_pred hhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccccccc
Confidence 33555666666666553 122222 455666666655433211 10 113445566666666665532
Q ss_pred -----CCccccCCCCCcEEEccCCCCCCCC---------------cccCCCCCCCEEEeeCCCCC-----cccccccCCC
Q 006185 78 -----PPSSLSFLSNLRTLRLDYCNHLPDL---------------SLIGELSGLEILDLSKSDVN-----EIPVSFGRLS 132 (657)
Q Consensus 78 -----lp~~~~~l~~L~~L~l~~~~~~~~~---------------~~~~~l~~L~~L~l~~~~i~-----~lp~~i~~l~ 132 (657)
+...+..+++|++|++++|. +... ......+.|+.++++++.++ .+...+...+
T Consensus 108 ~~~~~l~~~l~~~~~L~~L~l~~n~-l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~ 186 (344)
T d2ca6a1 108 TAQEPLIDFLSKHTPLEHLYLHNNG-LGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHR 186 (344)
T ss_dssp TTHHHHHHHHHHCTTCCEEECCSSC-CHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCT
T ss_pred ccccchhhhhcccccchheeccccc-ccccccccccccccccccccccccCcccceeecccccccccccccccchhhhhh
Confidence 23334445566666666554 2110 00123445556666555544 1222344455
Q ss_pred CCCEEEccCCCCCCCC-----chhHhhcCccCcEEEcccCccccccccccccccccchhhhcCCCCccEEEeecCC
Q 006185 133 HLRLLDLTDCYNLELI-----PPGVLSRLRKLEELYMSHSFCHWQFESEEDTRSNAKFIELGALSRLTSLHIDIPK 203 (657)
Q Consensus 133 ~L~~L~l~~c~~~~~~-----~~~~~~~l~~L~~L~l~~~~~~~~~~g~~~~~~~~~~~~l~~l~~L~~L~l~~~~ 203 (657)
+|++|++++|. ++.. ....+..+++|++|++++|.+... ........+..+++|++|++++|.
T Consensus 187 ~L~~L~L~~n~-i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~-------g~~~L~~~l~~~~~L~~L~Ls~n~ 254 (344)
T d2ca6a1 187 LLHTVKMVQNG-IRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHL-------GSSALAIALKSWPNLRELGLNDCL 254 (344)
T ss_dssp TCCEEECCSSC-CCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHH-------HHHHHHHHGGGCTTCCEEECTTCC
T ss_pred hhccccccccc-ccccccccchhhhhcchhhhccccccccccccc-------ccccccccccccccchhhhhhcCc
Confidence 55566555532 2210 011133455555555555543210 011233344455555555555544
No 35
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.90 E-value=2.7e-09 Score=91.36 Aligned_cols=94 Identities=17% Similarity=0.022 Sum_probs=81.7
Q ss_pred CCCCCCCC-CCCCCCCccEEEccCC-CccccCCCC--CCCCCcEEEecCCcCcCCCchhhcCCCCccEEEecCCcCCCCC
Q 006185 4 GVELKDWP-SINTFEDLTGISLMFN-DIHEVPDGL--ECPKLQALFLQKNHLLVIPDPFFQGMKDLKVLDLGGIRMVSPP 79 (657)
Q Consensus 4 ~~~l~~~~-~~~~~~~L~~L~l~~~-~~~~l~~~~--~~~~L~~L~l~~~~~~~~~~~~~~~l~~Lr~L~L~~~~~~~lp 79 (657)
++++.++| .+..+++++.|++.++ .++.++... ++++|++|++++|.+..+++..|..+++|++|+|++|+++.+|
T Consensus 17 ~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~ 96 (156)
T d2ifga3 17 RDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLS 96 (156)
T ss_dssp SSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCC
T ss_pred CCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCcccC
Confidence 34555665 5778899999999876 599888654 8999999999999999999888999999999999999999999
Q ss_pred ccccCCCCCcEEEccCCC
Q 006185 80 SSLSFLSNLRTLRLDYCN 97 (657)
Q Consensus 80 ~~~~~l~~L~~L~l~~~~ 97 (657)
.......+|++|++++|.
T Consensus 97 ~~~~~~~~l~~L~L~~Np 114 (156)
T d2ifga3 97 WKTVQGLSLQELVLSGNP 114 (156)
T ss_dssp STTTCSCCCCEEECCSSC
T ss_pred hhhhccccccccccCCCc
Confidence 876666689999999998
No 36
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.73 E-value=1.8e-09 Score=106.65 Aligned_cols=205 Identities=17% Similarity=0.152 Sum_probs=140.2
Q ss_pred CCCCCCCccEEEccCCCccccC-----------CCC-CCCCCcEEEecCCcCcCCC----chhhcCCCCccEEEecCCcC
Q 006185 12 SINTFEDLTGISLMFNDIHEVP-----------DGL-ECPKLQALFLQKNHLLVIP----DPFFQGMKDLKVLDLGGIRM 75 (657)
Q Consensus 12 ~~~~~~~L~~L~l~~~~~~~l~-----------~~~-~~~~L~~L~l~~~~~~~~~----~~~~~~l~~Lr~L~L~~~~~ 75 (657)
.+...+.++.++++++...... ..+ .+++|++|++++|.+.... ..++...++|++|++++|.+
T Consensus 54 ~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l 133 (344)
T d2ca6a1 54 NIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGL 133 (344)
T ss_dssp TTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCC
T ss_pred HHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccccccccccchhhhhcccccchheecccccc
Confidence 3667899999999887654322 112 6789999999999876321 12346789999999999976
Q ss_pred CC-----CCc---------cccCCCCCcEEEccCCCCCCCC------cccCCCCCCCEEEeeCCCCCc------cccccc
Q 006185 76 VS-----PPS---------SLSFLSNLRTLRLDYCNHLPDL------SLIGELSGLEILDLSKSDVNE------IPVSFG 129 (657)
Q Consensus 76 ~~-----lp~---------~~~~l~~L~~L~l~~~~~~~~~------~~~~~l~~L~~L~l~~~~i~~------lp~~i~ 129 (657)
.. +.. .......|++++++++. ++.. ..+....+|++|++++|.++. +...+.
T Consensus 134 ~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~-i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~ 212 (344)
T d2ca6a1 134 GPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR-LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLA 212 (344)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC-CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGG
T ss_pred cccccccccccccccccccccccCcccceeeccccc-ccccccccccchhhhhhhhcccccccccccccccccchhhhhc
Confidence 31 111 11356789999999887 4321 345678899999999998873 344577
Q ss_pred CCCCCCEEEccCCCCCCC-----CchhHhhcCccCcEEEcccCccccccccccccccccchhhhcC--CCCccEEEeecC
Q 006185 130 RLSHLRLLDLTDCYNLEL-----IPPGVLSRLRKLEELYMSHSFCHWQFESEEDTRSNAKFIELGA--LSRLTSLHIDIP 202 (657)
Q Consensus 130 ~l~~L~~L~l~~c~~~~~-----~~~~~~~~l~~L~~L~l~~~~~~~~~~g~~~~~~~~~~~~l~~--l~~L~~L~l~~~ 202 (657)
.+++|++|++++|. ++. +.. .+..+++|++|++++|.+.... .......+.. ...|++|++++|
T Consensus 213 ~~~~L~~L~Ls~N~-i~~~g~~~L~~-~l~~~~~L~~L~Ls~n~i~~~g-------~~~l~~~l~~~~~~~L~~L~ls~N 283 (344)
T d2ca6a1 213 YCQELKVLDLQDNT-FTHLGSSALAI-ALKSWPNLRELGLNDCLLSARG-------AAAVVDAFSKLENIGLQTLRLQYN 283 (344)
T ss_dssp GCTTCCEEECCSSC-CHHHHHHHHHH-HGGGCTTCCEEECTTCCCCHHH-------HHHHHHHHHTCSSCCCCEEECCSS
T ss_pred chhhhccccccccc-ccccccccccc-cccccccchhhhhhcCccCchh-------hHHHHHHhhhccCCCCCEEECCCC
Confidence 88999999999854 332 222 2678899999999999764311 1133344443 367999999999
Q ss_pred CCcc-----CCCC--CCCCCccEEEEEEcCc
Q 006185 203 KGEI-----MPSD--MSLPNLTSFSITIGEE 226 (657)
Q Consensus 203 ~~~~-----~~~~--~~l~~L~~L~l~~~~~ 226 (657)
.++. +... ...++|+.|++.++..
T Consensus 284 ~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~ 314 (344)
T d2ca6a1 284 EIELDAVRTLKTVIDEKMPDLLFLELNGNRF 314 (344)
T ss_dssp CCBHHHHHHHHHHHHHHCTTCCEEECTTSBS
T ss_pred cCChHHHHHHHHHHHccCCCCCEEECCCCcC
Confidence 8633 1111 2467899999987643
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.90 E-value=2.1e-07 Score=79.93 Aligned_cols=82 Identities=22% Similarity=0.125 Sum_probs=57.7
Q ss_pred chhhcCCCCccEEEecCCcCCCCC---ccccCCCCCcEEEccCCCCCCCCcc--cCCCCCCCEEEeeCCCCCccc-----
Q 006185 56 DPFFQGMKDLKVLDLGGIRMVSPP---SSLSFLSNLRTLRLDYCNHLPDLSL--IGELSGLEILDLSKSDVNEIP----- 125 (657)
Q Consensus 56 ~~~~~~l~~Lr~L~L~~~~~~~lp---~~~~~l~~L~~L~l~~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~lp----- 125 (657)
..++.++++|++|++++|+++.++ ..+..+++|++|++++|. ++.... ..+..+|+.|++++|.+....
T Consensus 58 ~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~-i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~ 136 (162)
T d1koha1 58 RIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNE-LKSERELDKIKGLKLEELWLDGNSLSDTFRDQST 136 (162)
T ss_dssp HHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSC-CCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHH
T ss_pred HHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCc-cccchhhhhhhccccceeecCCCCcCcCcccchh
Confidence 344567888888999988887653 446678889999999888 444322 223456888889988876432
Q ss_pred ---ccccCCCCCCEEE
Q 006185 126 ---VSFGRLSHLRLLD 138 (657)
Q Consensus 126 ---~~i~~l~~L~~L~ 138 (657)
..+..+++|++||
T Consensus 137 y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 137 YISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHHHTTSTTCCEET
T ss_pred HHHHHHHHCCCCCEEC
Confidence 1256788898885
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.49 E-value=9.8e-06 Score=69.08 Aligned_cols=103 Identities=20% Similarity=0.129 Sum_probs=72.2
Q ss_pred CCCCCCccEEEccCCCccccCCCC-CCCCCcEEEecCCcCcCCCc--hhhcCCCCccEEEecCCcCCCCCc-cccCCCCC
Q 006185 13 INTFEDLTGISLMFNDIHEVPDGL-ECPKLQALFLQKNHLLVIPD--PFFQGMKDLKVLDLGGIRMVSPPS-SLSFLSNL 88 (657)
Q Consensus 13 ~~~~~~L~~L~l~~~~~~~l~~~~-~~~~L~~L~l~~~~~~~~~~--~~~~~l~~Lr~L~L~~~~~~~lp~-~~~~l~~L 88 (657)
+..+..+..++...+....++... .+++|++|++++|.+..+++ ..+..+++|++|++++|.++++++ ......+|
T Consensus 38 l~~~~~~~~l~~~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L 117 (162)
T d1koha1 38 LVAQNIDVVLNRRSSMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKL 117 (162)
T ss_dssp TTTTTCCCCTTSHHHHHHHHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCC
T ss_pred hhhccchhhcchhhhHhhhhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhcccc
Confidence 333344444444433333343333 68999999999999997653 446789999999999999998775 23345579
Q ss_pred cEEEccCCCCCCCC--------cccCCCCCCCEEE
Q 006185 89 RTLRLDYCNHLPDL--------SLIGELSGLEILD 115 (657)
Q Consensus 89 ~~L~l~~~~~~~~~--------~~~~~l~~L~~L~ 115 (657)
+.|++++|...... ..+..+++|++||
T Consensus 118 ~~L~L~~Npl~~~~~~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 118 EELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp SSCCCTTSTTSSSSSSHHHHHHHHHTTSTTCCEET
T ss_pred ceeecCCCCcCcCcccchhHHHHHHHHCCCCCEEC
Confidence 99999999843322 2367899999986
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.97 E-value=0.00023 Score=60.61 Aligned_cols=58 Identities=9% Similarity=0.036 Sum_probs=26.4
Q ss_pred CCCCCEEEeeCCCCC-----cccccccCCCCCCEEEccCCCCCCC--------CchhHhhcCccCcEEEcccC
Q 006185 108 LSGLEILDLSKSDVN-----EIPVSFGRLSHLRLLDLTDCYNLEL--------IPPGVLSRLRKLEELYMSHS 167 (657)
Q Consensus 108 l~~L~~L~l~~~~i~-----~lp~~i~~l~~L~~L~l~~c~~~~~--------~~~~~~~~l~~L~~L~l~~~ 167 (657)
.+.|++|++++|.++ .+-..+...+.|++|+++++. ... +.. ++..-+.|++|+++.+
T Consensus 71 n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~-~~~~g~~~~~~l~~-~L~~n~sL~~l~l~~~ 141 (167)
T d1pgva_ 71 SPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQR-QSVLGNQVEMDMMM-AIEENESLLRVGISFA 141 (167)
T ss_dssp CSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCS-SCCCCHHHHHHHHH-HHHHCSSCCEEECCCC
T ss_pred cccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCc-CCCccHHHHHHHHH-HHHhCCCccEeeCcCC
Confidence 344555555555444 122334445555555555431 111 111 1344566666666544
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.96 E-value=0.00031 Score=59.73 Aligned_cols=83 Identities=10% Similarity=0.125 Sum_probs=41.3
Q ss_pred CCCCCcEEEccCCCCCCCC------cccCCCCCCCEEEeeCCCCC-----cccccccCCCCCCEEEccCCCCCCCCc-hh
Q 006185 84 FLSNLRTLRLDYCNHLPDL------SLIGELSGLEILDLSKSDVN-----EIPVSFGRLSHLRLLDLTDCYNLELIP-PG 151 (657)
Q Consensus 84 ~l~~L~~L~l~~~~~~~~~------~~~~~l~~L~~L~l~~~~i~-----~lp~~i~~l~~L~~L~l~~c~~~~~~~-~~ 151 (657)
+.++|++|+|+++..++.. ..+...++|++|++++|.++ .+.+.+...+.|++|++++|. ++.-. ..
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~-i~~~g~~~ 91 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNF-LTPELLAR 91 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSB-CCHHHHHH
T ss_pred CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhh-cchHHHHH
Confidence 3455666666554323221 23445566666666666554 223334455666777776643 32211 10
Q ss_pred ---HhhcCccCcEEEcccC
Q 006185 152 ---VLSRLRKLEELYMSHS 167 (657)
Q Consensus 152 ---~~~~l~~L~~L~l~~~ 167 (657)
++...+.|++|+++++
T Consensus 92 l~~aL~~n~sL~~L~l~~n 110 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQ 110 (167)
T ss_dssp HHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHhCCcCCEEECCCC
Confidence 1334455666666555
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.71 E-value=0.00053 Score=58.16 Aligned_cols=18 Identities=11% Similarity=-0.071 Sum_probs=8.9
Q ss_pred chhhhcCCCCccEEEeec
Q 006185 184 KFIELGALSRLTSLHIDI 201 (657)
Q Consensus 184 ~~~~l~~l~~L~~L~l~~ 201 (657)
....+...+.|+.|++.+
T Consensus 124 La~~L~~n~~L~~L~l~~ 141 (166)
T d1io0a_ 124 IANMLEKNTTLLKFGYHF 141 (166)
T ss_dssp HHHHHHHCSSCCEEECCC
T ss_pred HHHHHHhCCCcCEEeCcC
Confidence 334444555555555544
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.37 E-value=0.0012 Score=55.96 Aligned_cols=84 Identities=12% Similarity=0.098 Sum_probs=41.9
Q ss_pred ccCCCCCcEEEccCCCCCCCC------cccCCCCCCCEEEeeCCCCC-----cccccccCCCCCCEEEccCCC-CCCC--
Q 006185 82 LSFLSNLRTLRLDYCNHLPDL------SLIGELSGLEILDLSKSDVN-----EIPVSFGRLSHLRLLDLTDCY-NLEL-- 147 (657)
Q Consensus 82 ~~~l~~L~~L~l~~~~~~~~~------~~~~~l~~L~~L~l~~~~i~-----~lp~~i~~l~~L~~L~l~~c~-~~~~-- 147 (657)
+...++|++|++++|. ++.. ..+....+++.++++++.++ .+.+.+...++|+.+++..+. .++.
T Consensus 42 l~~n~~L~~L~Ls~n~-l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~ 120 (166)
T d1io0a_ 42 LKTNTYVKKFSIVGTR-SNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNV 120 (166)
T ss_dssp HTTCCSCCEEECTTSC-CCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHH
T ss_pred HhcCCccCeeeccCCc-ccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHH
Confidence 3344455555555544 2211 23334455666666655544 233455566667766655432 2222
Q ss_pred ---CchhHhhcCccCcEEEcccC
Q 006185 148 ---IPPGVLSRLRKLEELYMSHS 167 (657)
Q Consensus 148 ---~~~~~~~~l~~L~~L~l~~~ 167 (657)
+.. ++.+.+.|++|+++.+
T Consensus 121 ~~~La~-~L~~n~~L~~L~l~~~ 142 (166)
T d1io0a_ 121 EMEIAN-MLEKNTTLLKFGYHFT 142 (166)
T ss_dssp HHHHHH-HHHHCSSCCEEECCCS
T ss_pred HHHHHH-HHHhCCCcCEEeCcCC
Confidence 222 2456677777777654
Done!