Query 006194
Match_columns 657
No_of_seqs 353 out of 2630
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 18:31:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006194.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006194hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 100.0 5E-104 2E-108 883.5 73.2 594 31-638 1-604 (605)
2 3d2f_A Heat shock protein homo 100.0 6E-104 2E-108 888.5 68.7 603 31-640 1-628 (675)
3 2kho_A Heat shock protein 70; 100.0 3E-102 9E-107 869.7 63.6 594 31-638 1-604 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 5.4E-97 2E-101 819.5 53.9 551 30-580 2-553 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 1.6E-86 5.5E-91 730.4 55.6 505 31-570 1-509 (509)
6 3i33_A Heat shock-related 70 k 100.0 3.1E-64 1E-68 540.7 45.6 378 32-409 23-403 (404)
7 3qfu_A 78 kDa glucose-regulate 100.0 1.9E-63 6.4E-68 533.2 45.6 379 30-408 16-394 (394)
8 4gni_A Putative heat shock pro 100.0 1.8E-62 6.3E-67 527.4 41.2 377 32-410 13-404 (409)
9 1dkg_D Molecular chaperone DNA 100.0 1.2E-60 4E-65 509.1 41.7 373 31-408 1-383 (383)
10 1jce_A ROD shape-determining p 100.0 5.3E-41 1.8E-45 352.0 21.6 311 31-408 2-327 (344)
11 4e81_A Chaperone protein DNAK; 100.0 1.7E-39 5.7E-44 312.0 27.7 215 419-638 2-216 (219)
12 1u00_A HSC66, chaperone protei 100.0 6.6E-37 2.2E-41 297.3 29.1 215 421-640 1-215 (227)
13 3n8e_A Stress-70 protein, mito 100.0 3.1E-32 1.1E-36 252.3 16.7 165 415-580 17-181 (182)
14 3h0x_A 78 kDa glucose-regulate 100.0 8.3E-30 2.8E-34 230.3 18.4 151 420-570 2-152 (152)
15 3dob_A Heat shock 70 kDa prote 100.0 5.8E-30 2E-34 230.7 17.0 151 420-570 2-152 (152)
16 3dqg_A Heat shock 70 kDa prote 100.0 9.7E-30 3.3E-34 229.0 15.1 150 420-570 2-151 (151)
17 2op6_A Heat shock 70 kDa prote 100.0 1.4E-27 4.7E-32 217.4 17.7 151 420-570 2-152 (152)
18 2fsj_A Hypothetical protein TA 99.9 2.2E-28 7.4E-33 254.9 9.4 226 142-405 95-343 (346)
19 2ych_A Competence protein PILM 99.9 7.2E-28 2.5E-32 255.5 12.6 317 33-405 14-373 (377)
20 3h1q_A Ethanolamine utilizatio 99.9 5.8E-26 2E-30 229.5 22.8 203 145-404 70-272 (272)
21 4a2a_A Cell division protein F 99.9 3E-24 1E-28 228.4 20.5 198 181-406 168-393 (419)
22 1k8k_A ARP3, actin-like protei 99.9 7.4E-25 2.5E-29 235.3 14.3 243 146-406 87-387 (418)
23 2fxu_A Alpha-actin-1, actin, a 99.9 5.7E-25 1.9E-29 232.4 9.7 306 33-406 6-349 (375)
24 1q5l_A Chaperone protein DNAK; 99.9 4.2E-22 1.4E-26 176.0 12.5 119 415-533 14-132 (135)
25 2zgy_A Plasmid segregation pro 99.9 3.2E-22 1.1E-26 206.6 11.8 228 140-404 72-319 (320)
26 4ehu_A Activator of 2-hydroxyi 99.8 2.9E-18 9.8E-23 173.2 15.7 181 192-408 68-256 (276)
27 1k8k_B ARP2, actin-like protei 99.7 1.8E-19 6.3E-24 191.1 2.7 215 168-406 105-364 (394)
28 3js6_A Uncharacterized PARM pr 99.7 6.9E-17 2.3E-21 168.0 13.8 203 169-409 115-339 (355)
29 4apw_A ALP12; actin-like prote 99.6 7E-16 2.4E-20 159.1 4.5 203 169-408 107-326 (329)
30 3lof_A Heat shock 70 kDa prote 99.5 3E-14 1E-18 122.1 10.8 84 558-641 3-87 (113)
31 3qb0_A Actin-related protein 4 99.4 2.5E-13 8.7E-18 145.6 11.2 178 33-270 24-209 (498)
32 3dwl_A Actin-related protein 3 99.4 5.8E-14 2E-18 149.2 3.1 244 144-406 101-396 (427)
33 2p32_A Heat shock 70 kDa prote 99.4 2.9E-13 9.9E-18 117.1 6.6 99 559-657 13-119 (120)
34 1ud0_A HSC70, 70 kDa heat-shoc 99.3 1.7E-12 5.9E-17 111.3 6.6 83 562-644 2-85 (113)
35 2d0o_A DIOL dehydratase-reacti 99.1 1.6E-11 5.4E-16 128.3 3.9 198 180-406 367-604 (610)
36 1nbw_A Glycerol dehydratase re 99.1 2.5E-11 8.5E-16 127.4 4.4 194 182-404 371-604 (607)
37 4fo0_A Actin-related protein 8 99.1 8.5E-10 2.9E-14 123.5 16.9 109 153-270 178-293 (593)
38 1hux_A Activator of (R)-2-hydr 98.9 5.4E-08 1.8E-12 97.0 19.1 171 198-407 77-257 (270)
39 3ll3_A Gluconate kinase; xylul 98.7 3.4E-08 1.2E-12 107.7 12.1 82 324-410 363-444 (504)
40 3hz6_A Xylulokinase; xylulose, 98.5 5.8E-07 2E-11 98.1 13.1 204 188-410 224-454 (511)
41 3ifr_A Carbohydrate kinase, FG 98.4 5.8E-06 2E-10 90.1 18.1 203 188-410 226-451 (508)
42 4e1j_A Glycerol kinase; struct 98.3 8.9E-07 3.1E-11 96.8 9.1 195 192-410 255-476 (520)
43 3ezw_A Glycerol kinase; glycer 98.3 7.5E-07 2.6E-11 97.6 8.1 83 323-410 370-453 (526)
44 3h3n_X Glycerol kinase; ATP-bi 98.3 6.2E-06 2.1E-10 89.9 13.8 83 323-410 371-454 (506)
45 2ews_A Pantothenate kinase; PA 98.1 7.5E-05 2.6E-09 74.0 16.2 47 358-404 237-286 (287)
46 4am6_A Actin-like protein ARP8 97.7 5.1E-05 1.7E-09 82.3 8.4 121 168-304 222-346 (655)
47 3vgl_A Glucokinase; ROK family 97.1 0.039 1.3E-06 55.9 20.4 44 192-237 95-139 (321)
48 3mdq_A Exopolyphosphatase; str 97.0 0.02 7E-07 57.7 17.4 75 183-263 92-169 (315)
49 1t6c_A Exopolyphosphatase; alp 97.0 0.0022 7.6E-08 64.8 10.2 77 183-264 100-177 (315)
50 2ch5_A NAGK protein; transfera 97.0 0.26 8.9E-06 50.2 25.8 61 166-232 70-133 (347)
51 2e2o_A Hexokinase; acetate and 96.9 0.3 1E-05 48.6 25.0 49 357-406 239-287 (299)
52 3l0q_A Xylulose kinase; xlylul 96.9 0.00099 3.4E-08 73.3 6.8 88 321-410 406-493 (554)
53 2ivn_A O-sialoglycoprotein end 96.9 0.18 6.2E-06 51.1 22.7 65 338-407 230-299 (330)
54 2i7n_A Pantothenate kinase 1; 96.8 0.008 2.7E-07 61.1 11.7 70 330-404 279-358 (360)
55 4bc3_A Xylulose kinase; transf 96.8 0.0022 7.7E-08 70.1 8.3 78 330-409 407-484 (538)
56 3vov_A Glucokinase, hexokinase 96.8 0.11 3.8E-06 52.0 20.2 38 192-230 97-135 (302)
57 4db3_A Glcnac kinase, N-acetyl 96.7 0.053 1.8E-06 55.0 17.4 48 357-404 269-324 (327)
58 3r8e_A Hypothetical sugar kina 96.6 0.056 1.9E-06 54.7 17.1 70 335-405 239-318 (321)
59 2zf5_O Glycerol kinase; hypert 96.6 0.003 1E-07 68.4 7.7 81 324-410 364-444 (497)
60 2itm_A Xylulose kinase, xylulo 96.6 0.0026 8.9E-08 68.7 7.2 83 324-410 356-438 (484)
61 3i8b_A Xylulose kinase; strain 96.6 0.0022 7.7E-08 69.6 6.5 78 325-410 395-475 (515)
62 3jvp_A Ribulokinase; PSI-II, N 96.4 0.0032 1.1E-07 69.4 6.5 81 324-409 409-490 (572)
63 3g25_A Glycerol kinase; IDP007 96.4 0.0031 1.1E-07 68.4 6.2 79 324-410 373-455 (501)
64 2qm1_A Glucokinase; alpha-beta 96.4 0.11 3.7E-06 52.6 17.4 49 358-406 263-321 (326)
65 2p3r_A Glycerol kinase; glycer 96.3 0.0034 1.2E-07 68.2 5.4 79 324-410 370-452 (510)
66 2gup_A ROK family protein; sug 96.2 0.15 5.2E-06 50.6 17.1 37 192-230 93-129 (292)
67 2dpn_A Glycerol kinase; thermu 96.2 0.0073 2.5E-07 65.3 7.8 82 324-410 367-449 (495)
68 4htl_A Beta-glucoside kinase; 96.2 0.19 6.4E-06 50.1 17.5 50 357-406 237-291 (297)
69 2d4w_A Glycerol kinase; alpha 96.1 0.0055 1.9E-07 66.5 6.0 52 357-410 403-454 (504)
70 2w40_A Glycerol kinase, putati 95.9 0.0071 2.4E-07 65.6 5.7 52 357-410 406-458 (503)
71 3en9_A Glycoprotease, O-sialog 95.6 0.38 1.3E-05 52.4 18.0 183 166-381 72-272 (540)
72 2uyt_A Rhamnulokinase; rhamnos 95.5 0.012 4.3E-07 63.4 5.9 80 322-407 360-440 (489)
73 3eno_A Putative O-sialoglycopr 95.3 2.6 8.9E-05 42.5 21.8 69 336-409 233-306 (334)
74 2ap1_A Putative regulator prot 95.1 0.65 2.2E-05 46.8 16.9 37 193-230 120-157 (327)
75 2hoe_A N-acetylglucosamine kin 94.9 1.4 4.9E-05 45.3 19.3 42 193-237 188-229 (380)
76 1z6r_A MLC protein; transcript 94.9 0.59 2E-05 48.8 16.3 43 193-237 186-229 (406)
77 3hi0_A Putative exopolyphospha 94.7 0.072 2.4E-06 57.5 8.9 74 183-262 103-177 (508)
78 3h6e_A Carbohydrate kinase, FG 94.4 0.034 1.2E-06 59.6 5.4 72 330-407 362-436 (482)
79 3cer_A Possible exopolyphospha 94.3 0.19 6.6E-06 51.1 10.5 77 184-264 106-191 (343)
80 1u6z_A Exopolyphosphatase; alp 94.3 0.3 1E-05 52.7 12.4 75 184-264 100-176 (513)
81 1z05_A Transcriptional regulat 94.0 1.4 4.7E-05 46.3 16.9 43 193-237 208-251 (429)
82 1zbs_A Hypothetical protein PG 93.5 0.6 2.1E-05 46.2 12.3 68 331-406 210-280 (291)
83 1zc6_A Probable N-acetylglucos 92.9 7.9 0.00027 38.2 25.3 64 332-405 227-292 (305)
84 3bex_A Type III pantothenate k 92.6 6.1 0.00021 37.9 17.4 20 34-53 5-24 (249)
85 2q2r_A Glucokinase 1, putative 92.1 1.5 5.2E-05 45.0 13.4 21 31-51 28-48 (373)
86 3o8m_A Hexokinase; rnaseh-like 89.8 1.8 6.3E-05 45.8 11.3 58 179-239 184-243 (485)
87 2yhx_A Hexokinase B; transfera 89.1 0.71 2.4E-05 48.8 7.5 56 181-239 164-221 (457)
88 3qbx_A Anhydro-N-acetylmuramic 85.8 2.2 7.6E-05 43.2 8.5 74 331-407 260-337 (371)
89 3cqy_A Anhydro-N-acetylmuramic 81.6 3.3 0.00011 42.0 7.7 74 330-407 266-343 (370)
90 1bdg_A Hexokinase; phosphotran 80.4 6.4 0.00022 41.4 9.9 57 179-238 171-229 (451)
91 3mcp_A Glucokinase; structural 77.5 9.5 0.00033 38.8 9.9 23 31-53 8-30 (366)
92 2uyt_A Rhamnulokinase; rhamnos 77.0 1.3 4.3E-05 47.5 3.2 22 29-50 1-22 (489)
93 3epq_A Putative fructokinase; 75.1 7.5 0.00026 38.4 8.2 38 192-230 96-134 (302)
94 3ven_A O-carbamoyltransferase 74.8 97 0.0033 33.3 20.2 80 326-410 280-361 (576)
95 3ttc_A HYPF, transcriptional r 73.9 6.3 0.00022 43.3 7.7 50 357-406 599-651 (657)
96 1woq_A Inorganic polyphosphate 73.3 22 0.00075 34.1 11.0 43 193-237 114-158 (267)
97 3vth_A Hydrogenase maturation 73.1 5.3 0.00018 44.8 7.0 64 341-409 682-750 (761)
98 4bc3_A Xylulose kinase; transf 72.9 2.2 7.7E-05 46.2 3.9 21 31-51 9-29 (538)
99 1nu0_A Hypothetical protein YQ 72.7 2.9 9.8E-05 36.1 3.8 22 31-52 2-23 (138)
100 1cza_N Hexokinase type I; stru 71.5 14 0.00047 42.7 10.2 56 180-238 183-241 (917)
101 1cza_N Hexokinase type I; stru 71.5 18 0.00061 41.8 11.1 57 179-238 630-689 (917)
102 4g9i_A Hydrogenase maturation 71.1 8.8 0.0003 43.2 8.2 62 341-407 694-760 (772)
103 3htv_A D-allose kinase, alloki 70.9 19 0.00063 35.6 9.9 50 357-406 239-299 (310)
104 3djc_A Type III pantothenate k 70.2 3 0.0001 40.4 3.8 71 324-405 182-254 (266)
105 3l0q_A Xylulose kinase; xlylul 69.5 2.9 9.8E-05 45.5 3.8 21 31-51 4-24 (554)
106 3i8b_A Xylulose kinase; strain 69.0 3.1 0.00011 44.7 3.9 19 32-50 5-23 (515)
107 2w40_A Glycerol kinase, putati 68.9 2.6 9.1E-05 45.2 3.4 22 31-52 3-24 (503)
108 3h6e_A Carbohydrate kinase, FG 68.7 2 6.9E-05 45.8 2.3 21 31-51 5-25 (482)
109 3hm8_A Hexokinase-3; glucose, 68.3 24 0.00083 36.6 10.3 56 180-238 160-218 (445)
110 1iv0_A Hypothetical protein; r 68.1 3.2 0.00011 33.4 2.9 20 33-52 2-21 (98)
111 2p3r_A Glycerol kinase; glycer 67.9 2.6 9E-05 45.3 3.1 21 31-51 2-22 (510)
112 3aap_A Ectonucleoside triphosp 67.8 8.6 0.0003 38.9 6.7 44 194-238 108-158 (353)
113 3jvp_A Ribulokinase; PSI-II, N 67.5 3.3 0.00011 45.2 3.8 21 31-51 4-24 (572)
114 2dpn_A Glycerol kinase; thermu 67.3 2.4 8.3E-05 45.3 2.7 20 32-51 2-21 (495)
115 2zf5_O Glycerol kinase; hypert 64.3 3.5 0.00012 44.1 3.2 20 32-51 3-22 (497)
116 3f9m_A Glucokinase; hexokinase 63.8 25 0.00085 36.9 9.4 56 180-238 184-242 (470)
117 2zqm_A Prefoldin beta subunit 60.7 67 0.0023 26.1 11.7 54 588-645 63-116 (117)
118 3g25_A Glycerol kinase; IDP007 60.3 4.5 0.00015 43.3 3.1 20 32-51 6-25 (501)
119 1vhx_A Putative holliday junct 57.6 5.4 0.00018 34.9 2.6 19 33-51 4-22 (150)
120 3cj1_A Ectonucleoside triphosp 56.3 22 0.00075 37.3 7.5 43 196-238 150-208 (456)
121 2e1z_A Propionate kinase; TDCD 55.2 1.9E+02 0.0064 29.6 15.3 26 356-381 329-355 (415)
122 1hjr_A Holliday junction resol 53.7 16 0.00054 32.1 5.0 18 33-50 2-19 (158)
123 2iir_A Acetate kinase; transfe 52.8 2E+02 0.0069 29.2 14.8 43 335-381 304-347 (403)
124 3nmd_A CGMP dependent protein 51.8 44 0.0015 24.8 6.2 43 546-589 29-71 (72)
125 1g99_A Acetate kinase; alpha/b 51.1 1.8E+02 0.0062 29.6 13.0 43 335-381 304-347 (408)
126 4fla_A Regulation of nuclear P 50.8 49 0.0017 28.7 7.6 46 592-637 97-145 (152)
127 3sk3_A Acetate kinase, acetoki 49.7 96 0.0033 31.8 10.7 26 356-381 338-364 (415)
128 4ijn_A Acetate kinase, acetoki 48.6 46 0.0016 33.8 8.0 43 335-381 305-348 (398)
129 2d4w_A Glycerol kinase; alpha 48.2 8.6 0.0003 41.1 2.9 19 33-51 3-21 (504)
130 2itm_A Xylulose kinase, xylulo 47.5 8.5 0.00029 40.9 2.7 18 34-51 2-19 (484)
131 1sz2_A Glucokinase, glucose ki 46.9 12 0.0004 37.5 3.5 42 191-232 99-151 (332)
132 3cet_A Conserved archaeal prot 46.2 16 0.00054 36.4 4.1 38 198-238 108-145 (334)
133 2aa4_A Mannac kinase, putative 46.0 21 0.00073 34.6 5.2 47 358-404 234-286 (289)
134 1saz_A Probable butyrate kinas 45.2 17 0.00058 37.2 4.4 49 357-405 295-347 (381)
135 3o8m_A Hexokinase; rnaseh-like 44.0 55 0.0019 34.5 8.1 30 218-247 78-108 (485)
136 2f9w_A Pantothenate kinase; CO 43.5 18 0.00062 35.0 4.0 22 32-53 23-45 (271)
137 3zx3_A Ectonucleoside triphosp 42.9 42 0.0014 35.0 7.0 42 197-238 151-199 (452)
138 4ep4_A Crossover junction endo 42.7 17 0.00058 32.2 3.4 18 33-50 2-19 (166)
139 1saz_A Probable butyrate kinas 42.5 21 0.00071 36.5 4.6 22 31-52 1-22 (381)
140 2yhx_A Hexokinase B; transfera 41.1 89 0.003 32.6 9.2 26 218-243 59-84 (457)
141 3htv_A D-allose kinase, alloki 40.6 55 0.0019 32.1 7.3 20 32-51 7-26 (310)
142 1nbw_A Glycerol dehydratase re 39.6 17 0.00058 38.8 3.3 30 168-197 131-160 (607)
143 2h3g_X Biosynthetic protein; p 39.5 21 0.0007 34.5 3.7 73 324-406 180-252 (268)
144 3f9m_A Glucokinase; hexokinase 39.0 79 0.0027 33.1 8.3 52 218-272 75-135 (470)
145 2a01_A Apolipoprotein A-I; fou 37.8 33 0.0011 32.5 4.8 74 560-633 132-211 (243)
146 1zxo_A Conserved hypothetical 36.2 13 0.00046 36.2 1.9 67 334-405 211-277 (291)
147 2dfs_A Myosin-5A; myosin-V, in 32.2 2.2E+02 0.0076 33.3 11.5 24 249-272 438-461 (1080)
148 3epq_A Putative fructokinase; 32.1 72 0.0025 31.1 6.5 49 357-405 224-288 (302)
149 3nuw_A 2-OXO-3-deoxygalactonat 31.8 62 0.0021 31.5 5.7 43 359-404 248-290 (295)
150 3lay_A Zinc resistance-associa 31.0 2.8E+02 0.0095 24.5 10.0 66 535-609 66-131 (175)
151 3fcg_A F1 capsule-anchoring pr 28.8 1.7E+02 0.0059 22.7 6.7 55 465-533 27-81 (90)
152 1msz_A DNA-binding protein smu 28.3 37 0.0012 26.3 2.7 28 170-197 34-61 (86)
153 3zyy_X Iron-sulfur cluster bin 27.8 2.1E+02 0.0073 31.1 9.6 96 221-372 207-304 (631)
154 1wxp_A THO complex subunit 1; 27.6 88 0.003 25.3 5.2 50 594-646 58-110 (110)
155 1gs9_A Apolipoprotein E, APOE4 26.9 2.7E+02 0.0093 24.3 8.6 20 561-580 107-126 (165)
156 1zxo_A Conserved hypothetical 26.3 14 0.00047 36.1 -0.0 59 167-231 58-118 (291)
157 3zyy_X Iron-sulfur cluster bin 26.1 1E+02 0.0035 33.5 6.7 58 320-378 498-555 (631)
158 1hnj_A Beta-ketoacyl-acyl carr 25.5 75 0.0026 31.0 5.3 47 332-381 212-258 (317)
159 2yhw_A Bifunctional UDP-N-acet 25.2 38 0.0013 33.8 3.0 43 193-237 131-174 (343)
160 3hm8_A Hexokinase-3; glucose, 24.8 1.6E+02 0.0056 30.4 7.7 32 218-250 57-88 (445)
161 3r2p_A Apolipoprotein A-I; amp 24.3 3.7E+02 0.013 23.8 10.2 45 536-582 67-111 (185)
162 2yhw_A Bifunctional UDP-N-acet 23.6 1.6E+02 0.0056 28.9 7.5 20 32-51 30-49 (343)
163 1nfn_A Apolipoprotein E3; lipi 22.5 3.2E+02 0.011 24.4 8.5 22 560-581 106-127 (191)
164 1bdg_A Hexokinase; phosphotran 22.4 1.9E+02 0.0065 30.0 7.8 24 218-241 66-89 (451)
165 3cet_A Conserved archaeal prot 22.3 47 0.0016 32.9 2.9 36 34-69 2-42 (334)
166 3mxz_A Tubulin-specific chaper 22.3 3.2E+02 0.011 22.3 7.5 38 590-627 66-106 (116)
167 4am6_A Actin-like protein ARP8 22.3 32 0.0011 37.4 1.9 25 358-382 501-525 (655)
168 3fh3_A Putative ECF-type sigma 22.1 3.8E+02 0.013 23.0 8.4 22 535-556 34-55 (158)
169 2d0o_A DIOL dehydratase-reacti 21.4 80 0.0027 33.6 4.5 31 166-196 127-157 (610)
170 2qm1_A Glucokinase; alpha-beta 20.9 2.3E+02 0.0077 27.5 7.9 31 220-250 6-36 (326)
171 1ub7_A 3-oxoacyl-[acyl-carrier 20.8 97 0.0033 30.3 5.1 45 334-381 216-260 (322)
172 2ebd_A 3-oxoacyl-[acyl-carrier 20.4 1.1E+02 0.0036 29.7 5.2 44 335-381 207-250 (309)
173 1use_A VAsp, vasodilator-stimu 20.0 2E+02 0.0069 19.1 5.4 29 536-569 3-31 (45)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=5.5e-104 Score=883.47 Aligned_cols=594 Identities=52% Similarity=0.840 Sum_probs=564.8
Q ss_pred CCeEEEEEcCccceEEEEEECCeEEEEecCCCCcccceEEEEcC-CceeEcHHHHHHHhhcccchhhHhHHhhCCCCCCH
Q 006194 31 LGTVIGIDLGTTYSCVGVYRNGRVEIIANDQGNRITPSWVAFTD-TERLIGEAAKNQAALNAERTVFDVKRLIGRKFDDP 109 (657)
Q Consensus 31 ~~~viGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~-~~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~~~ 109 (657)
|+.+||||||||||+||++.+|.++++.|..|++++||+|+|.+ +++++|..|+.+...+|.++++++||++|++++++
T Consensus 1 M~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 80 (605)
T 4b9q_A 1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDE 80 (605)
T ss_dssp -CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSH
T ss_pred CCcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCH
Confidence 46899999999999999999999999999999999999999975 58999999999999999999999999999999999
Q ss_pred HHHhhhccCCeEEee-cCCceeEEEEEcCceeEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHH
Q 006194 110 EVQRDIKFLPYKIVN-KGGKPYIQVKVKGETKVFSPEEISAMILQKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKD 188 (657)
Q Consensus 110 ~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~el~~~~L~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~ 188 (657)
.++...+.+||.++. .+|...+. +.+ ..++|+++++++|+++++.|+.+++.++.++|||||++|++.||+++++
T Consensus 81 ~v~~~~~~~p~~~~~~~~g~~~~~--~~~--~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~ 156 (605)
T 4b9q_A 81 EVQRDVSIMPFKIIAADNGDAWVE--VKG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKD 156 (605)
T ss_dssp HHHHHHTTCSSEEEECTTSBEEEE--ETT--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEEcCCCceEEE--ECC--EEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHH
Confidence 999999999999986 56655544 466 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCceeeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEEEeC----CeEEEEEEeCCCCCccchhhHHH
Q 006194 189 AGIIAGLNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTIDN----GVFEVLATSGDTHLGGEDFDHRV 264 (657)
Q Consensus 189 Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~----~~~~v~~~~~~~~lGG~~~d~~l 264 (657)
|+++|||+++++++||+|||++|++.....+..++|||+||||+|++++++.+ +.++++++.++..+||.+||++|
T Consensus 157 Aa~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l 236 (605)
T 4b9q_A 157 AGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRL 236 (605)
T ss_dssp HHHHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHH
T ss_pred HHHHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHH
Confidence 99999999999999999999999988765678999999999999999999988 89999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHccCCceeEEEEeeccCC----ceeEEEecHHHHHHHHHHHHHHH
Q 006194 265 MDYFIKLIKKKYNKDISKDNKAIGKLRRECERAKRALSSQHQVRVEIESLFDG----VDFSEPLTRARFEELNMDLFKKT 340 (657)
Q Consensus 265 ~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~l~~~----~~~~~~itr~~fe~~~~~~~~~~ 340 (657)
++|+.++|+++++.++..+++++.+|+.+||++|+.||....+.+.++.+..+ .++.++|||++|+++++|+++++
T Consensus 237 ~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i 316 (605)
T 4b9q_A 237 INYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRS 316 (605)
T ss_dssp HHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988876543 67889999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHHHhhhcCCCCCCCcceEE
Q 006194 341 MGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQGGILSGEGGDETKGILL 420 (657)
Q Consensus 341 ~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~a~~~~~~~~~~~~~~~~ 420 (657)
..+++++|+.+++...+|+.|+||||+||+|+|++.|++.| +.++..+.||++|||+|||++|+.+++. .+++.+
T Consensus 317 ~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAai~a~~l~~~----~~~~~l 391 (605)
T 4b9q_A 317 IEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLL 391 (605)
T ss_dssp THHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH-TSCCCSSSCTTTHHHHHHHHHHHHHHTS----SCSEEE
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHh-ccCcCCCcChhHHHHHhHHHHHHHhcCC----CCceEE
Confidence 99999999999999999999999999999999999999999 7888999999999999999999999986 678999
Q ss_pred EeecccceeEEeeCCEEEEEEecCCCCCcceeeeeeeccCCCceeEEEEEecCCcccccCcceeeEEecCCCCCCCCCCe
Q 006194 421 LDVAPLSLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQSTVTIKVYEGERSLTKDCRELGRFDLSGIPPAPRGVPQ 500 (657)
Q Consensus 421 ~d~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~v~~g~~~~~~~~~~lg~~~l~~~~~~~~~~~~ 500 (657)
.|++|++||+++.+|.+.++|+||+++|++++.+|++..|+|+.+.|+||||++..+.+|..||+|.|.|+||.|.|.++
T Consensus 392 ~dv~p~slgie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~ 471 (605)
T 4b9q_A 392 LDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQ 471 (605)
T ss_dssp ECBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCCC
T ss_pred EeeeeeEEEEEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEcCCCcEEEEEEecCCcceeEEEEeccCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHhhhchHHHHHHHHHHHH
Q 006194 501 IEVTFEVDANGILHVTAEDKGAKNKQSITIINDKGRLSQEEIDRMVKEAEEFAEEDKKVRERVDSRNKLETYIYNMRSTI 580 (657)
Q Consensus 501 i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~ea~N~LE~~iy~~r~~l 580 (657)
|+|+|++|.||+|+|++.+..||++.+++|++. .+||++|+++++++++++..+|++.+++.+++|+||+|+|.+++.|
T Consensus 472 i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~~ 550 (605)
T 4b9q_A 472 IEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQV 550 (605)
T ss_dssp EEEEEEECTTSCEEEEEEETTTCCEECCEEESC-CSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcCCcEEEEEEEecCCCcEEEEEecCC-CCCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999887 6899999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 006194 581 NDKLADKIDSDDKERIESTLKEALEWLDDNQNAEKDDFDEKMKEVEAVCNPVIKQVYE 638 (657)
Q Consensus 581 ~~~~~~~~~~~e~~~i~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e 638 (657)
++ +.+++++++++++...++++++||+.+ +.++|++++++|++.++++..++|+
T Consensus 551 ~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 551 EE-AGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HH-HGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred Hh-hhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 86 888999999999999999999999986 6899999999999999999999875
No 2
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=5.8e-104 Score=888.54 Aligned_cols=603 Identities=29% Similarity=0.502 Sum_probs=565.6
Q ss_pred CCeEEEEEcCccceEEEEEECCeEEEEecCCCCcccceEEEEcCCceeEcHHHHHHHhhcccchhhHhHHhhCCCCCCHH
Q 006194 31 LGTVIGIDLGTTYSCVGVYRNGRVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAALNAERTVFDVKRLIGRKFDDPE 110 (657)
Q Consensus 31 ~~~viGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~~~~ 110 (657)
|+.+||||||||||+||++.+|.++++.|+.|++.+||+|+|.+++++||..|+.+...+|.++++++||++|+.++++.
T Consensus 1 Mm~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 80 (675)
T 3d2f_A 1 MSTPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPD 80 (675)
T ss_dssp -CCCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTT
T ss_pred CCcEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHH
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccCCeEEee-cCCceeEEEEEcCceeEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHH
Q 006194 111 VQRDIKFLPYKIVN-KGGKPYIQVKVKGETKVFSPEEISAMILQKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDA 189 (657)
Q Consensus 111 ~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~el~~~~L~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~A 189 (657)
++...+++||.++. .+|...+.+.+.|+...++|+++++++|+++++.|+.+++.++.++|||||++|++.||+++++|
T Consensus 81 v~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~A 160 (675)
T 3d2f_A 81 FEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADA 160 (675)
T ss_dssp HHHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHH
Confidence 99999999999987 67888888887887788999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeeecchhHHHHHHhccccC------CCcceEEEEEecCCeeEEEEEEEeCCeEEEEEEeCCCCCccchhhHH
Q 006194 190 GIIAGLNVARIINEPTAAAIAYGLDKK------GGEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHR 263 (657)
Q Consensus 190 a~~AGl~~~~li~Ep~Aaal~y~~~~~------~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~ 263 (657)
+++||++++++++||+|||++|++... ..+.++||||+||||||++++++.++.++++++.++..+||.+||+.
T Consensus 161 a~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~ 240 (675)
T 3d2f_A 161 ARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLA 240 (675)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHH
T ss_pred HHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHH
Confidence 999999999999999999999988653 24678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHccCCceeEEEEeeccCCceeEEEecHHHHHHHHHHHHHHHHHH
Q 006194 264 VMDYFIKLIKKKYNKDISKDNKAIGKLRRECERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNMDLFKKTMGP 343 (657)
Q Consensus 264 l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~l~~~~~~~~~itr~~fe~~~~~~~~~~~~~ 343 (657)
|++|+.++|+++++.++..+++++.+|+.+||++|+.||...++.+.++.++++.++.++|||++|+++|.|+++++..+
T Consensus 241 l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~ 320 (675)
T 3d2f_A 241 ITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEP 320 (675)
T ss_dssp HHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHH
T ss_pred HHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999899999999999999999999999999999998888899999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHHHhhhcCCCCCCCcceEEEee
Q 006194 344 VKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQGGILSGEGGDETKGILLLDV 423 (657)
Q Consensus 344 i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~a~~~~~~~~~~~~~~~~~d~ 423 (657)
|+++|+.+++++.+|+.|+||||+||+|+|++.|++.| +.++..+.||++|||+|||++|+.+++. ++++++.+.|+
T Consensus 321 i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAa~~a~~ls~~--~~v~~~~l~Dv 397 (675)
T 3d2f_A 321 VTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAF-GKPLSTTLNQDEAIAKGAAFICAIHSPT--LRVRPFKFEDI 397 (675)
T ss_dssp HHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHH-TSCEECCSCTTTHHHHHHHHHHHHTCSS--CCCCCCEEEEE
T ss_pred HHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhc-CCCccccCCcchHHHHHHHHHHHHhCCC--CcccceEEEee
Confidence 99999999999889999999999999999999999999 6788889999999999999999999987 56889999999
Q ss_pred cccceeEEeeCC----EEEEEEecCCCCCcceeeeeeeccCCCceeEEEE-EecCCcccc-cCcceeeEEecCCCCCCCC
Q 006194 424 APLSLGIETVGG----VMTKLIPRNTVIPTKKSQVFTTYQDQQSTVTIKV-YEGERSLTK-DCRELGRFDLSGIPPAPRG 497 (657)
Q Consensus 424 ~~~~~gi~~~~~----~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~v-~~g~~~~~~-~~~~lg~~~l~~~~~~~~~ 497 (657)
+|+++|+++.++ .+.++|++|++||++++.+|++..+++ +.+ |+|++.++. +|..||+|.|+|+||.|.|
T Consensus 398 ~p~slgi~~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~~----~~~~~~ge~~~~~~~n~~lg~f~l~gi~~~~~g 473 (675)
T 3d2f_A 398 HPYSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDFS----MAASYTDITQLPPNTPEQIANWEITGVQLPEGQ 473 (675)
T ss_dssp ECSCEEEEECCTTCSCSEEEEECTTEEESEEEEEEEEESSCEE----EEEEESCGGGSCTTCCSEEEEEEEECCCCCSSC
T ss_pred eecceEeeecCCCCCcceEEEEcCCCCCCcccceeeeecCCce----EEEEEcCCcccccccCceeeEEEecCcCCCCCC
Confidence 999999999876 499999999999999999999876543 444 679888887 8999999999999999999
Q ss_pred CC-eeEEEEEEcCCCcEEEEEE----------ecCCcceeEEEEeccCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHhhh
Q 006194 498 VP-QIEVTFEVDANGILHVTAE----------DKGAKNKQSITIINDKGRLSQEEIDRMVKEAEEFAEEDKKVRERVDSR 566 (657)
Q Consensus 498 ~~-~i~v~~~~d~~g~l~v~~~----------~~~~~~~~~~~i~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~ea~ 566 (657)
.+ +|+|+|++|.||+|+|++. ++.+|++.+++|++...+||++++++++++++++..+|+..+++.+++
T Consensus 474 ~~~~i~v~f~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~~~ 553 (675)
T 3d2f_A 474 DSVPVKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRK 553 (675)
T ss_dssp SCEEEEEEEEECTTSCEEEEEEEEECC------CCCCEEEECEEEEECSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEEEcCCCcEEEEEEEEeecccccccccCcceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 85 9999999999999999995 688999999999987668999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 006194 567 NKLETYIYNMRSTINDKLADKIDSDDKERIESTLKEALEWLDDN-QNAEKDDFDEKMKEVEAVCNPVIKQVYEKN 640 (657)
Q Consensus 567 N~LE~~iy~~r~~l~~~~~~~~~~~e~~~i~~~l~~~~~WL~~~-~~a~~~~~~~kl~~L~~~~~~i~~r~~e~~ 640 (657)
|+||+|+|++|+.|++.+.+++++++++++...++++++|||++ .++++++|++++++|+++++||..|++|+.
T Consensus 554 n~le~~i~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~~~~~l~~~~~~i~~r~~e~~ 628 (675)
T 3d2f_A 554 NTLEEYIYTLRGKLEEEYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKE 628 (675)
T ss_dssp HHHHHHHHHHHHHHTTTTGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999766889999999999999999999999976 578899999999999999999999998765
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=2.8e-102 Score=869.72 Aligned_cols=594 Identities=52% Similarity=0.846 Sum_probs=560.0
Q ss_pred CCeEEEEEcCccceEEEEEECCeEEEEecCCCCcccceEEEEc-CCceeEcHHHHHHHhhcccchhhHhHHhhCCCCCCH
Q 006194 31 LGTVIGIDLGTTYSCVGVYRNGRVEIIANDQGNRITPSWVAFT-DTERLIGEAAKNQAALNAERTVFDVKRLIGRKFDDP 109 (657)
Q Consensus 31 ~~~viGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~-~~~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~~~ 109 (657)
|+.+||||||||||+||++.+|.++++.|+.|++.+||+|+|. +++++||..|+.+...+|.++++++||++|+.++++
T Consensus 1 m~~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~ 80 (605)
T 2kho_A 1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDE 80 (605)
T ss_dssp ---CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSST
T ss_pred CCCEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcH
Confidence 3568999999999999999999999999999999999999995 468999999999999999999999999999999999
Q ss_pred HHHhhhccCCeEEee-cCCceeEEEEEcCceeEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHH
Q 006194 110 EVQRDIKFLPYKIVN-KGGKPYIQVKVKGETKVFSPEEISAMILQKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKD 188 (657)
Q Consensus 110 ~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~el~~~~L~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~ 188 (657)
.++...+.+||.++. .+|...+.+ +| ..++|+++++++|+++++.|+.+++.++.++|||||++|++.||+++++
T Consensus 81 ~v~~~~~~~p~~~~~~~~g~~~i~~--~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~ 156 (605)
T 2kho_A 81 EVQRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKD 156 (605)
T ss_dssp THHHHHHHCSSCEEECTTSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEECCCCceEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHH
Confidence 899888899999874 666666554 66 6899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCceeeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEEEe----CCeEEEEEEeCCCCCccchhhHHH
Q 006194 189 AGIIAGLNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTID----NGVFEVLATSGDTHLGGEDFDHRV 264 (657)
Q Consensus 189 Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~~~----~~~~~v~~~~~~~~lGG~~~d~~l 264 (657)
|+++||++++++++||+|||++|++.....+..+||||+||||||++++++. ++.++++++.++..+||.+||+.|
T Consensus 157 A~~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l 236 (605)
T 2kho_A 157 AGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRL 236 (605)
T ss_dssp HHHTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHH
T ss_pred HHHHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHH
Confidence 9999999999999999999999998765357889999999999999999998 789999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHccCCceeEEEEeeccCC----ceeEEEecHHHHHHHHHHHHHHH
Q 006194 265 MDYFIKLIKKKYNKDISKDNKAIGKLRRECERAKRALSSQHQVRVEIESLFDG----VDFSEPLTRARFEELNMDLFKKT 340 (657)
Q Consensus 265 ~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~l~~~----~~~~~~itr~~fe~~~~~~~~~~ 340 (657)
++|+.++|+++++.++..+++++.+|+.+||++|+.||....+.+.++.+.++ .++.++|||++|+++++|+++++
T Consensus 237 ~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i 316 (605)
T 2kho_A 237 INYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRS 316 (605)
T ss_dssp HHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGG
T ss_pred HHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHHH
Confidence 99999999999999998899999999999999999999999999998876653 56778999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHHHhhhcCCCCCCCcceEE
Q 006194 341 MGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQGGILSGEGGDETKGILL 420 (657)
Q Consensus 341 ~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~a~~~~~~~~~~~~~~~~ 420 (657)
..+|+++|+.+++...+|+.|+||||+|++|+|++.|++.| +.++..+.||++|||+|||++|+.+++. ++++.+
T Consensus 317 ~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f-g~~~~~~~npd~aVA~GAa~~a~~l~~~----~~~~~l 391 (605)
T 2kho_A 317 IEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLL 391 (605)
T ss_dssp TSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHHTTTTTS----CCCCCC
T ss_pred HHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhc-CCCcCcCCCcchHHHHHHHHHHHHhcCC----ccCceE
Confidence 99999999999999899999999999999999999999999 6788889999999999999999999875 578999
Q ss_pred EeecccceeEEeeCCEEEEEEecCCCCCcceeeeeeeccCCCceeEEEEEecCCcccccCcceeeEEecCCCCCCCCCCe
Q 006194 421 LDVAPLSLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQSTVTIKVYEGERSLTKDCRELGRFDLSGIPPAPRGVPQ 500 (657)
Q Consensus 421 ~d~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~v~~g~~~~~~~~~~lg~~~l~~~~~~~~~~~~ 500 (657)
.|++|+++|+++.+|.+.++|++|++||++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|+|+|+.|+|.++
T Consensus 392 ~dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~ 471 (605)
T 2kho_A 392 LDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQ 471 (605)
T ss_dssp SBCCCCCEEEEETTTEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTCSC
T ss_pred EeeeeeeccccccCCceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCCCCCCCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEcCCCcEEEEEEecCCcceeEEEEeccCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHhhhchHHHHHHHHHHHH
Q 006194 501 IEVTFEVDANGILHVTAEDKGAKNKQSITIINDKGRLSQEEIDRMVKEAEEFAEEDKKVRERVDSRNKLETYIYNMRSTI 580 (657)
Q Consensus 501 i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~ea~N~LE~~iy~~r~~l 580 (657)
|+|+|++|.||+|+|++.+..||+..+++|+++ .+||++|+++++++++++..+|+..+++.+++|+||+|+|++++.|
T Consensus 472 i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l 550 (605)
T 2kho_A 472 IEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQV 550 (605)
T ss_dssp EEEEEEECTTSCEEEEEEETTTCCEEEEEECTT-SSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcCCCceeEEEEEcCCCceeecccccc-cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988 8899999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 006194 581 NDKLADKIDSDDKERIESTLKEALEWLDDNQNAEKDDFDEKMKEVEAVCNPVIKQVYE 638 (657)
Q Consensus 581 ~~~~~~~~~~~e~~~i~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e 638 (657)
++ +.+++++++++++.+.++++++||+++ +.++|++++++|++.++||..|+++
T Consensus 551 ~~-~~~~~~~~~~~~i~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 2kho_A 551 EE-AGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HH-HGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHTTCHHHHHHHC-
T ss_pred Hh-hhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77 889999999999999999999999964 7999999999999999999999875
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=5.4e-97 Score=819.51 Aligned_cols=551 Identities=67% Similarity=1.051 Sum_probs=526.0
Q ss_pred CCCeEEEEEcCccceEEEEEECCeEEEEecCCCCcccceEEEEcCCceeEcHHHHHHHhhcccchhhHhHHhhCCCCCCH
Q 006194 30 KLGTVIGIDLGTTYSCVGVYRNGRVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAALNAERTVFDVKRLIGRKFDDP 109 (657)
Q Consensus 30 ~~~~viGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~~~ 109 (657)
.|+.+||||||||||+||++.+|.++++.|+.|++++||+|+|.+++++||..|+.+...+|.++++++||++|++++++
T Consensus 2 ~m~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 81 (554)
T 1yuw_A 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDA 81 (554)
T ss_dssp CSCCCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCS
T ss_pred CCCCEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcH
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccCCeEEeecCCceeEEEEEcCceeEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHH
Q 006194 110 EVQRDIKFLPYKIVNKGGKPYIQVKVKGETKVFSPEEISAMILQKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDA 189 (657)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~el~~~~L~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~A 189 (657)
.++..++.+||.++..+|.+.+.+.+.+....++|+++++++|+++++.|+.+++.++.++|||||++|++.||+++++|
T Consensus 82 ~v~~~~~~~p~~v~~~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A 161 (554)
T 1yuw_A 82 VVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDA 161 (554)
T ss_dssp HHHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEecCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 99999999999999878888888888887789999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeeecchhHHHHHHhccccCC-CcceEEEEEecCCeeEEEEEEEeCCeEEEEEEeCCCCCccchhhHHHHHHH
Q 006194 190 GIIAGLNVARIINEPTAAAIAYGLDKKG-GEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRVMDYF 268 (657)
Q Consensus 190 a~~AGl~~~~li~Ep~Aaal~y~~~~~~-~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l 268 (657)
++.||++++++++||+|||++|++.... .+..++|||+||||+|++++++.++.++++++.++..+||.+||+.|++|+
T Consensus 162 ~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l 241 (554)
T 1yuw_A 162 GTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNHF 241 (554)
T ss_dssp HHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred HHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999987653 467899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHccCCceeEEEEeeccCCceeEEEecHHHHHHHHHHHHHHHHHHHHHHH
Q 006194 269 IKLIKKKYNKDISKDNKAIGKLRRECERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNMDLFKKTMGPVKKAL 348 (657)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~l~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l 348 (657)
.++|+++++.++..+++++.+|+.+||++|+.||...++.+.++.+.++.++...++|++|+++++|+++++..+++++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~~L 321 (554)
T 1yuw_A 242 IAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKAL 321 (554)
T ss_dssp HHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHHHH
T ss_pred HHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988999999999999999999999999999999888899999999999999999999999999999999
Q ss_pred HHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHHHhhhcCCCCCCCcceEEEeecccce
Q 006194 349 EDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQGGILSGEGGDETKGILLLDVAPLSL 428 (657)
Q Consensus 349 ~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~a~~~~~~~~~~~~~~~~~d~~~~~~ 428 (657)
+.+++++.+|+.|+|+||+|++|+|++.|++.|++.++..+.||++|||+|||++|+.+++...++++++.+.|++|++|
T Consensus 322 ~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~sl 401 (554)
T 1yuw_A 322 RDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSL 401 (554)
T ss_dssp HHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSSCE
T ss_pred HHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEeeeeEE
Confidence 99999988999999999999999999999999977888889999999999999999999875335578899999999999
Q ss_pred eEEeeCCEEEEEEecCCCCCcceeeeeeeccCCCceeEEEEEecCCcccccCcceeeEEecCCCCCCCCCCeeEEEEEEc
Q 006194 429 GIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQSTVTIKVYEGERSLTKDCRELGRFDLSGIPPAPRGVPQIEVTFEVD 508 (657)
Q Consensus 429 gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~v~~g~~~~~~~~~~lg~~~l~~~~~~~~~~~~i~v~~~~d 508 (657)
|+++.+|.+.++|++|++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|+|+|+.|+|.++|+|+|++|
T Consensus 402 gi~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id 481 (554)
T 1yuw_A 402 GIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDID 481 (554)
T ss_dssp EEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEEC
T ss_pred EEEecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCcccccEEEEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEEecCCcceeEEEEeccCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHhhhchHHHHHHHHHHHH
Q 006194 509 ANGILHVTAEDKGAKNKQSITIINDKGRLSQEEIDRMVKEAEEFAEEDKKVRERVDSRNKLETYIYNMRSTI 580 (657)
Q Consensus 509 ~~g~l~v~~~~~~~~~~~~~~i~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~ea~N~LE~~iy~~r~~l 580 (657)
.||+|+|++.+..+|++.+++|+++..+||++|+++++++++++..+|++.+++.+++|+||+|+|.+|++|
T Consensus 482 ~~gil~v~a~~~~tg~~~~~~i~~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l 553 (554)
T 1yuw_A 482 ANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553 (554)
T ss_dssp TTCCEEEEEEETTTCCEEEEEECCCSSCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECSSCCSCSCCCC
T ss_pred cCceEEEEEEeccCCCceeEEEecCCCCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999998878899999999999999999999999999999999999999988655
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=1.6e-86 Score=730.39 Aligned_cols=505 Identities=59% Similarity=0.938 Sum_probs=471.9
Q ss_pred CCeEEEEEcCccceEEEEEECCeEEEEecCCCCcccceEEEEcCCceeEcHHHHHHHhhcccchhhHhHHhhCCCCCCHH
Q 006194 31 LGTVIGIDLGTTYSCVGVYRNGRVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAALNAERTVFDVKRLIGRKFDDPE 110 (657)
Q Consensus 31 ~~~viGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~~~~ 110 (657)
|+.+||||||||||+||++.+|.++++.|+.|++++||+|+|.++++++|+.|..+...+| ++++++|+++|+++.
T Consensus 1 m~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~--- 76 (509)
T 2v7y_A 1 MSKIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK--- 76 (509)
T ss_dssp CCCEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC---
T ss_pred CCCEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE---
Confidence 3578999999999999999999999999999999999999998889999999999999999 999999999997431
Q ss_pred HHhhhccCCeEEeecCCceeEEEEEcCceeEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHH
Q 006194 111 VQRDIKFLPYKIVNKGGKPYIQVKVKGETKVFSPEEISAMILQKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAG 190 (657)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~el~~~~L~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~Aa 190 (657)
+.++| ..++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++|+
T Consensus 77 ----------------------~~~~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~ 132 (509)
T 2v7y_A 77 ----------------------VEIEG--KQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAG 132 (509)
T ss_dssp ----------------------EEETT--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred ----------------------EEECC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 22355 578999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEEEeCCeEEEEEEeCCCCCccchhhHHHHHHHHH
Q 006194 191 IIAGLNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRVMDYFIK 270 (657)
Q Consensus 191 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~ 270 (657)
+.||++++++++||+|||++|++... .+..++|||+||||+|++++++.++.++++++.++..+||.+||+.|++|+.+
T Consensus 133 ~~AGl~~~~li~Ep~AAAlay~~~~~-~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~ 211 (509)
T 2v7y_A 133 RIAGLEVERIINEPTAAALAYGLDKE-EDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVN 211 (509)
T ss_dssp HHTTCEEEEEEEHHHHHHHHTTGGGS-CSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred HHcCCCeEEEecCHHHHHHHHhhccC-CCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999998765 47889999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHccCCceeEEEEeeccC---C-ceeEEEecHHHHHHHHHHHHHHHHHHHHH
Q 006194 271 LIKKKYNKDISKDNKAIGKLRRECERAKRALSSQHQVRVEIESLFD---G-VDFSEPLTRARFEELNMDLFKKTMGPVKK 346 (657)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~l~~---~-~~~~~~itr~~fe~~~~~~~~~~~~~i~~ 346 (657)
+|+++++.++..+++.+.+|+.+||++|+.||....+.+.++.+.+ | .++.++|+|++|+++++|+++++..++.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~ 291 (509)
T 2v7y_A 212 QFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQ 291 (509)
T ss_dssp HHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHHH
T ss_pred HHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888889999999999999999999999999999887654 2 46778999999999999999999999999
Q ss_pred HHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHHHhhhcCCCCCCCcceEEEeeccc
Q 006194 347 ALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQGGILSGEGGDETKGILLLDVAPL 426 (657)
Q Consensus 347 ~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~a~~~~~~~~~~~~~~~~~d~~~~ 426 (657)
+|+.+++...+|+.|+|+||+|++|+|++.|++.| +.++..+.||++|||+|||++|+.+++. ++++.+.|++|+
T Consensus 292 ~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f-~~~~~~~~~p~~aVa~Gaa~~a~~l~~~----~~~~~~~dv~p~ 366 (509)
T 2v7y_A 292 ALQDAGLTPADIDKVILVGGSTRIPAVQEAIKREL-GKEPHKGVNPDEVVAIGAAIQGGVIAGE----VKDVVLLDVTPL 366 (509)
T ss_dssp HHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHH-SSCCBCCSCTTTHHHHHHHHHHHHHHTC----CCCCCCCCBCSS
T ss_pred HHHHcCCChhHCcEEEEECCcccChHHHHHHHHHh-CCCcCcCCCchhhhHhhHHHHHHHhcCC----ccCceEEEeecc
Confidence 99999998889999999999999999999999999 6788889999999999999999999876 578899999999
Q ss_pred ceeEEeeCCEEEEEEecCCCCCcceeeeeeeccCCCceeEEEEEecCCcccccCcceeeEEecCCCCCCCCCCeeEEEEE
Q 006194 427 SLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQSTVTIKVYEGERSLTKDCRELGRFDLSGIPPAPRGVPQIEVTFE 506 (657)
Q Consensus 427 ~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~v~~g~~~~~~~~~~lg~~~l~~~~~~~~~~~~i~v~~~ 506 (657)
+||+++.+|.+.++|++|+++|++++..|++..|+|+.+.|.+|||++..+.+|..||+|.|+++|+.|+|.++|+|+|+
T Consensus 367 slgi~~~~~~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~ 446 (509)
T 2v7y_A 367 SLGIETMGGVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFD 446 (509)
T ss_dssp EEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCCCTTCSCEEEEEE
T ss_pred ccceeecCCceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCCCCcccEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCcEEEEEEecCCcceeEEEEeccCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHhhhchHH
Q 006194 507 VDANGILHVTAEDKGAKNKQSITIINDKGRLSQEEIDRMVKEAEEFAEEDKKVRERVDSRNKLE 570 (657)
Q Consensus 507 ~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~ea~N~LE 570 (657)
+|.||+|+|++.+..+|++.+++|+++ .+||++|+++++++++++..+|+..+++.+++|+||
T Consensus 447 id~~gil~v~a~~~~~g~~~~~~i~~~-~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 447 IDANGIVHVRAKDLGTNKEQSITIKSS-SGLSEEEIQRMIKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp ECTTSCEEEEEEETTTCCEEEEEECSS-CSCCSHHHHHHHHHHHHSCGGGGGGGGCCCC-----
T ss_pred EcCCceEEEEEEEcCCCcEEEEEEEec-CCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHhhcC
Confidence 999999999999999999999999988 789999999999999999999999999999999987
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=3.1e-64 Score=540.73 Aligned_cols=378 Identities=69% Similarity=1.077 Sum_probs=362.7
Q ss_pred CeEEEEEcCccceEEEEEECCeEEEEecCCCCcccceEEEEcCCceeEcHHHHHHHhhcccchhhHhHHhhCCCCCCHHH
Q 006194 32 GTVIGIDLGTTYSCVGVYRNGRVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAALNAERTVFDVKRLIGRKFDDPEV 111 (657)
Q Consensus 32 ~~viGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~~~~~ 111 (657)
+.+||||||||||+||++.+|.++++.|+.|++++||+|+|.++.+++|..|..+...+|.++++++|+++|+.++++.+
T Consensus 23 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~~~ 102 (404)
T 3i33_A 23 MPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATV 102 (404)
T ss_dssp CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSHHH
T ss_pred CCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhccCCeEEeecCCceeEEEEEcCceeEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHHH
Q 006194 112 QRDIKFLPYKIVNKGGKPYIQVKVKGETKVFSPEEISAMILQKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAGI 191 (657)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~el~~~~L~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~Aa~ 191 (657)
+...+.+||.+...+|...+.+.+.++...++|+++++++|+++++.++.+++..+.++|||||++|++.||+++++|++
T Consensus 103 ~~~~~~~p~~~~~~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a~~ 182 (404)
T 3i33_A 103 QSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGT 182 (404)
T ss_dssp HHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHHhhCCceEEccCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 99999999999998999999999988878999999999999999999999999999999999999999999999999999
Q ss_pred HcCCceeeecchhHHHHHHhccccCC---CcceEEEEEecCCeeEEEEEEEeCCeEEEEEEeCCCCCccchhhHHHHHHH
Q 006194 192 IAGLNVARIINEPTAAAIAYGLDKKG---GEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRVMDYF 268 (657)
Q Consensus 192 ~AGl~~~~li~Ep~Aaal~y~~~~~~---~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l 268 (657)
.||++++.+++||+|||++|+..... .+..++|||+||||+|++++++.++.+++++..++..+||.+||+.|++++
T Consensus 183 ~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l 262 (404)
T 3i33_A 183 ITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHL 262 (404)
T ss_dssp HHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred HcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999887652 478899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHccCCceeEEEEeeccCCceeEEEecHHHHHHHHHHHHHHHHHHHHHHH
Q 006194 269 IKLIKKKYNKDISKDNKAIGKLRRECERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNMDLFKKTMGPVKKAL 348 (657)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~l~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l 348 (657)
.++|+++++.++..+++.+.+|+.+||++|+.||......+.++.+.++.++.+.|+|++|+++++++++++...|.++|
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l 342 (404)
T 3i33_A 263 AEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKAL 342 (404)
T ss_dssp HHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHHH
T ss_pred HHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999989999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHHHhhhcC
Q 006194 349 EDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQGGILSG 409 (657)
Q Consensus 349 ~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~a~~~~~ 409 (657)
+.+++...+|+.|+|+||+|++|+|++.|++.|++.++..+.||++|||+|||++|+.+++
T Consensus 343 ~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 343 RDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 9999988899999999999999999999999998788989999999999999999999875
No 7
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=1.9e-63 Score=533.24 Aligned_cols=379 Identities=71% Similarity=1.087 Sum_probs=363.7
Q ss_pred CCCeEEEEEcCccceEEEEEECCeEEEEecCCCCcccceEEEEcCCceeEcHHHHHHHhhcccchhhHhHHhhCCCCCCH
Q 006194 30 KLGTVIGIDLGTTYSCVGVYRNGRVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAALNAERTVFDVKRLIGRKFDDP 109 (657)
Q Consensus 30 ~~~~viGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~~~ 109 (657)
.+..+||||||||||+||++.+|.++++.|+.|++++||+|+|.++++++|+.|......+|.++++++|+++|++++++
T Consensus 16 ~~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 95 (394)
T 3qfu_A 16 NYGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDR 95 (394)
T ss_dssp CCCSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCH
T ss_pred cCCCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcH
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccCCeEEeecCCceeEEEEEcCceeEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHH
Q 006194 110 EVQRDIKFLPYKIVNKGGKPYIQVKVKGETKVFSPEEISAMILQKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDA 189 (657)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~el~~~~L~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~A 189 (657)
.++...+.+||.+.+.++.+.+.+.+.++...++|+++++++|+++++.++.+++..+.++|||||++|++.||+++++|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a 175 (394)
T 3qfu_A 96 SVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDA 175 (394)
T ss_dssp HHHHHHTTCSSEEEEETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEcCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHH
Confidence 99999999999999888999999988887789999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEEEeCCeEEEEEEeCCCCCccchhhHHHHHHHH
Q 006194 190 GIIAGLNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRVMDYFI 269 (657)
Q Consensus 190 a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~ 269 (657)
++.||++++.+++||+|||++|++.....+..++|||+||||+|++++++.++.+++++..++..+||.+||+.|++++.
T Consensus 176 ~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~ 255 (394)
T 3qfu_A 176 GTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLI 255 (394)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHH
T ss_pred HHHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHHH
Confidence 99999999999999999999998877666789999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHccCCceeEEEEeeccCCceeEEEecHHHHHHHHHHHHHHHHHHHHHHHH
Q 006194 270 KLIKKKYNKDISKDNKAIGKLRRECERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNMDLFKKTMGPVKKALE 349 (657)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~l~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~ 349 (657)
++|+++++.++..+++.+.+|+.+||++|+.|+......+.++.+.++.++...++|++|+++++++++++...|.++|+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~ 335 (394)
T 3qfu_A 256 KAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQ 335 (394)
T ss_dssp HHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHHHhhhc
Q 006194 350 DAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQGGILS 408 (657)
Q Consensus 350 ~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~a~~~~ 408 (657)
.++....+++.|+|+||+|++|+|++.|++.|++.++..+.||+++||+|||++|+.++
T Consensus 336 ~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 336 DSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 99998889999999999999999999999999878898999999999999999999764
No 8
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=1.8e-62 Score=527.35 Aligned_cols=377 Identities=31% Similarity=0.518 Sum_probs=343.8
Q ss_pred CeEEEEEcCccceEEEEEECCeEEEEecCCCCcccceEEEEcCCceeEcHHHHHHHhhcccchhhHhHHhhCCCCCCHHH
Q 006194 32 GTVIGIDLGTTYSCVGVYRNGRVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAALNAERTVFDVKRLIGRKFDDPEV 111 (657)
Q Consensus 32 ~~viGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~~~~~ 111 (657)
+.+||||||||||+||++.+|.++++.|+.|.+++||+|+|.++.+++|..|..+...+|.++++++|+++|+.++++.+
T Consensus 13 ~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~~ 92 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVDP 92 (409)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCCC
T ss_pred CcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchhh
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999998877654
Q ss_pred HhhhccCCeEEeecCCceeEEEEEc----CceeEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHH
Q 006194 112 QRDIKFLPYKIVNKGGKPYIQVKVK----GETKVFSPEEISAMILQKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATK 187 (657)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~v~~~----~~~~~~~~~el~~~~L~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~ 187 (657)
... ..++.+.+.+|...+.+... +....++|+++++++|+++++.++.+++..+.++|||||++|++.||++++
T Consensus 93 ~~~--~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~ 170 (409)
T 4gni_A 93 THN--HASAHPQEAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAALI 170 (409)
T ss_dssp GGG--TTSCCCEEETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHH
T ss_pred hhh--ccccceecCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHH
Confidence 433 34444556677777776543 345789999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCceeeecchhHHHHHHhcccc--CCCcceEEEEEecCCeeEEEEEEEeCCeEEEEEEeCCCCCccchhhHHHH
Q 006194 188 DAGIIAGLNVARIINEPTAAAIAYGLDK--KGGEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRVM 265 (657)
Q Consensus 188 ~Aa~~AGl~~~~li~Ep~Aaal~y~~~~--~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~ 265 (657)
+|++.||++++.+++||+|||++|+... ...+..++|||+||||+|++++++.++.++++++.++..+||.+||+.|+
T Consensus 171 ~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~ 250 (409)
T 4gni_A 171 AAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLI 250 (409)
T ss_dssp HHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHH
T ss_pred HHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHH
Confidence 9999999999999999999999998875 23578899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHccCCceeEEEEeeccCCceeEEEecHHHHHHHHHHHHHHHHHH
Q 006194 266 DYFIKLIKKKYN--KDISKDNKAIGKLRRECERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNMDLFKKTMGP 343 (657)
Q Consensus 266 ~~l~~~~~~~~~--~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~l~~~~~~~~~itr~~fe~~~~~~~~~~~~~ 343 (657)
+++.+.|..+++ .+...+++.+.+|+.+||++|+.||....+.+.++.+.++.++...|||++|+++++|+++++..+
T Consensus 251 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~ 330 (409)
T 4gni_A 251 DHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGFNRL 330 (409)
T ss_dssp HHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHHHHH
Confidence 999999999988 788889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCC-CC------CCCCCchhhhHhHHHHHHhhhcCC
Q 006194 344 VKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGK-EP------SKGINPDEAVAHGAAVQGGILSGE 410 (657)
Q Consensus 344 i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~-~v------~~~~~~~~ava~GAa~~a~~~~~~ 410 (657)
|+++|+.+++...+|+.|+|+||+|++|+|++.|++.|+.. ++ ....||++|||+|||++|+.....
T Consensus 331 i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~~ 404 (409)
T 4gni_A 331 VESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQEH 404 (409)
T ss_dssp HHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhhh
Confidence 99999999998889999999999999999999999999543 24 678899999999999999987643
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=1.2e-60 Score=509.14 Aligned_cols=373 Identities=54% Similarity=0.891 Sum_probs=340.4
Q ss_pred CCeEEEEEcCccceEEEEEECCeEEEEecCCCCcccceEEEEcC-CceeEcHHHHHHHhhcccchhhHhHHhhCCCCCCH
Q 006194 31 LGTVIGIDLGTTYSCVGVYRNGRVEIIANDQGNRITPSWVAFTD-TERLIGEAAKNQAALNAERTVFDVKRLIGRKFDDP 109 (657)
Q Consensus 31 ~~~viGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~-~~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~~~ 109 (657)
|+.+||||||||||+||++.+|.++++.|+.|.+++||+|+|.+ ++++||..|+.....+|.++++++|+++|+.++++
T Consensus 1 m~~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 80 (383)
T 1dkg_D 1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDE 80 (383)
T ss_dssp --CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSH
T ss_pred CCcEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcH
Confidence 35689999999999999999999999999999999999999964 68899999999999999999999999999999999
Q ss_pred HHHhhhccCCeEEee-cCCceeEEEEEcCceeEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHH
Q 006194 110 EVQRDIKFLPYKIVN-KGGKPYIQVKVKGETKVFSPEEISAMILQKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKD 188 (657)
Q Consensus 110 ~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~el~~~~L~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~ 188 (657)
.++...+.+||.+.. .++...+.+ +| ..++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++
T Consensus 81 ~~~~~~~~~p~~~~~~~~~~~~~~~--~g--~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~ 156 (383)
T 1dkg_D 81 EVQRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKD 156 (383)
T ss_dssp HHHHHTTTCSSEEEECSSSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEEcCCCcEEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHH
Confidence 898888899999874 566655554 66 6899999999999999999999999889999999999999999999999
Q ss_pred HHHHcCCceeeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEEEe----CCeEEEEEEeCCCCCccchhhHHH
Q 006194 189 AGIIAGLNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTID----NGVFEVLATSGDTHLGGEDFDHRV 264 (657)
Q Consensus 189 Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~~~----~~~~~v~~~~~~~~lGG~~~d~~l 264 (657)
|++.||++++.+++||+|||++|+......+..++|||+||||+|+++++.. ++.++++++.++..+||.+||+.|
T Consensus 157 a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l 236 (383)
T 1dkg_D 157 AGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRL 236 (383)
T ss_dssp HHHHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHH
T ss_pred HHHHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHH
Confidence 9999999999999999999999988754347789999999999999999998 578889998898999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHccCCceeEEEEeeccC---C-ceeEEEecHHHHHHHHHHHHHHH
Q 006194 265 MDYFIKLIKKKYNKDISKDNKAIGKLRRECERAKRALSSQHQVRVEIESLFD---G-VDFSEPLTRARFEELNMDLFKKT 340 (657)
Q Consensus 265 ~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~l~~---~-~~~~~~itr~~fe~~~~~~~~~~ 340 (657)
++++.++|..+++.++..+++.+.+|+..||++|+.|+...+..+.++.+.+ | .++.+.|+|++|+++++|.++++
T Consensus 237 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i 316 (383)
T 1dkg_D 237 INYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRS 316 (383)
T ss_dssp HHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHH
Confidence 9999999999988888888999999999999999999999888888876654 2 45678999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHHHhhhc
Q 006194 341 MGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQGGILS 408 (657)
Q Consensus 341 ~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~a~~~~ 408 (657)
...+.++|+.+++...+++.|+|+||+|++|+|++.|++.| +.++..+.||+++||+|||++|+.++
T Consensus 317 ~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 317 IELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHh-CCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 99999999999988889999999999999999999999999 67888889999999999999998763
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=5.3e-41 Score=351.96 Aligned_cols=311 Identities=26% Similarity=0.348 Sum_probs=237.7
Q ss_pred CCeEEEEEcCccceEEEEEECCeEEEEecCCCCcccceEEEEcCC--c-eeEcHHHHHHHhhcccchhhHhHHhhCCCCC
Q 006194 31 LGTVIGIDLGTTYSCVGVYRNGRVEIIANDQGNRITPSWVAFTDT--E-RLIGEAAKNQAALNAERTVFDVKRLIGRKFD 107 (657)
Q Consensus 31 ~~~viGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~--~-~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~ 107 (657)
|+.+|||||||+||++++..++ .++ .+||+|+|.++ + .++|++|+....++|.++..
T Consensus 2 ~~~~igIDlGT~~s~v~~~~~~--~~~-------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~----------- 61 (344)
T 1jce_A 2 LRKDIGIDLGTANTLVFLRGKG--IVV-------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKA----------- 61 (344)
T ss_dssp --CEEEEEECSSEEEEEETTTE--EEE-------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEE-----------
T ss_pred CCceEEEEcCcCcEEEEECCCC--EEE-------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEE-----------
Confidence 3468999999999999876443 222 26999999865 3 47999997766666655421
Q ss_pred CHHHHhhhccCCeEEeecCCceeEEEEEcCceeEe-CHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHH
Q 006194 108 DPEVQRDIKFLPYKIVNKGGKPYIQVKVKGETKVF-SPEEISAMILQKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQAT 186 (657)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~el~~~~L~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l 186 (657)
..|+. +|....+ .+++++++++++++.. ..++ ...+|||||++|++.||+++
T Consensus 62 ---------~~p~~--------------~g~i~~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~ 114 (344)
T 1jce_A 62 ---------IRPMR--------------DGVIADYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAI 114 (344)
T ss_dssp ---------ECCEE--------------TTEESSHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHH
T ss_pred ---------EecCC--------------CCeeCChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHH
Confidence 11221 1110112 2455555555554432 1223 47899999999999999999
Q ss_pred HHHHHHcCCceeeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEEEeCCeEEEEEEeCCCCCccchhhHHHHH
Q 006194 187 KDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRVMD 266 (657)
Q Consensus 187 ~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~ 266 (657)
++|++.||++++.+++||+|||++|+.... .+..++|||+||||+|+++++.... + ..++..+||.+||+.|.+
T Consensus 115 ~~a~~~aG~~~~~li~ep~Aaa~~~~~~~~-~~~~~lVvDiGggttdvsv~~~~~~----~-~~~~~~lGG~~id~~l~~ 188 (344)
T 1jce_A 115 LDAGLEAGASKVFLIEEPMAAAIGSNLNVE-EPSGNMVVDIGGGTTEVAVISLGSI----V-TWESIRIAGDEMDEAIVQ 188 (344)
T ss_dssp HHHHHHTTCSEEEEEEHHHHHHHHTTCCTT-SSSCEEEEEECSSCEEEEEEETTEE----E-EEEEESCSHHHHHHHHHH
T ss_pred HHHHHHcCCCeEeccCCHHHHHHhcCCCCC-CCceEEEEEeCCCeEEEEEEEcCCE----E-eeCCCCccChhHHHHHHH
Confidence 999999999999999999999999987654 3678999999999999999987431 1 245678999999999999
Q ss_pred HHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHccCCce------eEEEEe--eccCCceeEEEecHHHHHHHHHHHHH
Q 006194 267 YFIKLIKKKYNKDISKDNKAIGKLRRECERAKRALSSQHQ------VRVEIE--SLFDGVDFSEPLTRARFEELNMDLFK 338 (657)
Q Consensus 267 ~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~------~~~~i~--~l~~~~~~~~~itr~~fe~~~~~~~~ 338 (657)
++.+++ +.++. ...||++|+.|+.... ..+.++ .+.++.+..++|+|++|+++++|.++
T Consensus 189 ~l~~~~----~~~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~ 255 (344)
T 1jce_A 189 YVRETY----RVAIG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVV 255 (344)
T ss_dssp HHHHHH----CEECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHHHHH
T ss_pred HHHHHh----CcccC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHHHHHH
Confidence 987654 32222 3689999999987642 244443 45567778899999999999999999
Q ss_pred HHHHHHHHHHHHcCCC--CCCc-ceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHHHhhhc
Q 006194 339 KTMGPVKKALEDAGLK--KTDI-REIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQGGILS 408 (657)
Q Consensus 339 ~~~~~i~~~l~~~~~~--~~~i-~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~a~~~~ 408 (657)
++.+.|.++|+.++.. ...+ +.|+|+||+|++|++++.|++.| +.++....||+++||+||+++|+.++
T Consensus 256 ~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 256 AIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKET-GISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHH-SSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred HHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHH-CCCccccCChHHHHHHHHHHHHhChH
Confidence 9999999999986532 1224 68999999999999999999999 67777788999999999999998654
No 11
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=100.00 E-value=1.7e-39 Score=311.96 Aligned_cols=215 Identities=49% Similarity=0.757 Sum_probs=207.0
Q ss_pred EEEeecccceeEEeeCCEEEEEEecCCCCCcceeeeeeeccCCCceeEEEEEecCCcccccCcceeeEEecCCCCCCCCC
Q 006194 419 LLLDVAPLSLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQSTVTIKVYEGERSLTKDCRELGRFDLSGIPPAPRGV 498 (657)
Q Consensus 419 ~~~d~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~v~~g~~~~~~~~~~lg~~~l~~~~~~~~~~ 498 (657)
++.|++|+|+|+++.+|.|.++||||++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.|+||+|+|.
T Consensus 2 ~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G~ 81 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM 81 (219)
T ss_dssp CCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred eEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEEEcCCCcEEEEEEecCCcceeEEEEeccCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHhhhchHHHHHHHHHH
Q 006194 499 PQIEVTFEVDANGILHVTAEDKGAKNKQSITIINDKGRLSQEEIDRMVKEAEEFAEEDKKVRERVDSRNKLETYIYNMRS 578 (657)
Q Consensus 499 ~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~ea~N~LE~~iy~~r~ 578 (657)
++|+|+|++|.||+|+|++.+..||++.+++|++. .+||++||++++++++++..+|+..+++.+++|+||+|+|.+++
T Consensus 82 ~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~-~~Ls~eeI~~m~~~a~~~~~eD~~~r~~~e~kn~le~~i~~~~~ 160 (219)
T 4e81_A 82 PQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRK 160 (219)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTT-CSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEeCCCCCEeeeeeccccCccceEeeecc-ccccHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999886 67999999999999999999999999999999999999999999
Q ss_pred HHhhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 006194 579 TINDKLADKIDSDDKERIESTLKEALEWLDDNQNAEKDDFDEKMKEVEAVCNPVIKQVYE 638 (657)
Q Consensus 579 ~l~~~~~~~~~~~e~~~i~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e 638 (657)
.|++ +.+++++++++++...++++++||+++ +.++|++++++|++.++||..|+++
T Consensus 161 ~l~~-~~~~l~~~~k~~i~~~l~~~~~~L~~~---~~~~i~~~~~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 161 QVEE-AGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 216 (219)
T ss_dssp HHHH-HGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHH-hhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9987 888999999999999999999999987 7899999999999999999999887
No 12
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=100.00 E-value=6.6e-37 Score=297.30 Aligned_cols=215 Identities=34% Similarity=0.594 Sum_probs=206.1
Q ss_pred EeecccceeEEeeCCEEEEEEecCCCCCcceeeeeeeccCCCceeEEEEEecCCcccccCcceeeEEecCCCCCCCCCCe
Q 006194 421 LDVAPLSLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQSTVTIKVYEGERSLTKDCRELGRFDLSGIPPAPRGVPQ 500 (657)
Q Consensus 421 ~d~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~v~~g~~~~~~~~~~lg~~~l~~~~~~~~~~~~ 500 (657)
.|++|+++|+++.+|.+.+||++|++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.|+|+.|+|.++
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~ 80 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH 80 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEcCCCcEEEEEEecCCcceeEEEEeccCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHhhhchHHHHHHHHHHHH
Q 006194 501 IEVTFEVDANGILHVTAEDKGAKNKQSITIINDKGRLSQEEIDRMVKEAEEFAEEDKKVRERVDSRNKLETYIYNMRSTI 580 (657)
Q Consensus 501 i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~ea~N~LE~~iy~~r~~l 580 (657)
|+|+|++|.||+|+|++.+..+|+...++|+.. .+||++++++++++++++..+|+..+++.+++|+||+|+|.+|+.|
T Consensus 81 I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~-~~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~kn~le~~i~~~~~~l 159 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTAMEKSTGVEASIQVKPS-YGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGAL 159 (227)
T ss_dssp EEEEEEECTTCCEEEEEEETTTCCEEEEEECCC-SCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCcEEEEeecccccccceEEEEec-cCCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999887 6699999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 006194 581 NDKLADKIDSDDKERIESTLKEALEWLDDNQNAEKDDFDEKMKEVEAVCNPVIKQVYEKN 640 (657)
Q Consensus 581 ~~~~~~~~~~~e~~~i~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e~~ 640 (657)
.+ +.+++++++++++...++++++||+++ +.++|++++++|+++++||..|++.++
T Consensus 160 ~~-~~~~~~~~~k~~i~~~l~~~~~wl~~~---d~~~~~~~~~~L~~~~~~i~~r~~~~~ 215 (227)
T 1u00_A 160 AA-DAALLSAAERQVIDDAAAHLSEVAQGD---DVDAIEQAIKNVDKQTQDFAARRMDQS 215 (227)
T ss_dssp HH-HGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Hh-hhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77 788999999999999999999999964 689999999999999999999987655
No 13
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.98 E-value=3.1e-32 Score=252.33 Aligned_cols=165 Identities=56% Similarity=0.866 Sum_probs=154.4
Q ss_pred CcceEEEeecccceeEEeeCCEEEEEEecCCCCCcceeeeeeeccCCCceeEEEEEecCCcccccCcceeeEEecCCCCC
Q 006194 415 TKGILLLDVAPLSLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQSTVTIKVYEGERSLTKDCRELGRFDLSGIPPA 494 (657)
Q Consensus 415 ~~~~~~~d~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~v~~g~~~~~~~~~~lg~~~l~~~~~~ 494 (657)
...+.+.|++|+++|+++.+|.|.++||||++||++++++|++..|+|+.+.|.||||++..+.+|..||+|.|.|+||+
T Consensus 17 ~~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~ 96 (182)
T 3n8e_A 17 NLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPA 96 (182)
T ss_dssp -------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCC
T ss_pred CCCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCC
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeeEEEEEEcCCCcEEEEEEecCCcceeEEEEeccCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHhhhchHHHHHH
Q 006194 495 PRGVPQIEVTFEVDANGILHVTAEDKGAKNKQSITIINDKGRLSQEEIDRMVKEAEEFAEEDKKVRERVDSRNKLETYIY 574 (657)
Q Consensus 495 ~~~~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~ea~N~LE~~iy 574 (657)
|+|.++|+|+|++|.||+|+|++.+..||++..++|++. ..||++|+++++++++++..+|++.+++.+++|+||+|+|
T Consensus 97 p~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~-~~Ls~eei~~mi~~a~~~~~eD~~~~~~~e~kn~le~~iy 175 (182)
T 3n8e_A 97 PRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSS-GGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIH 175 (182)
T ss_dssp CTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCC-CCCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecC-ccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998 8999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 006194 575 NMRSTI 580 (657)
Q Consensus 575 ~~r~~l 580 (657)
.+|+.|
T Consensus 176 ~~~~~l 181 (182)
T 3n8e_A 176 DTETKM 181 (182)
T ss_dssp CCSCCC
T ss_pred HHHHhh
Confidence 988655
No 14
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.97 E-value=8.3e-30 Score=230.25 Aligned_cols=151 Identities=69% Similarity=1.027 Sum_probs=146.7
Q ss_pred EEeecccceeEEeeCCEEEEEEecCCCCCcceeeeeeeccCCCceeEEEEEecCCcccccCcceeeEEecCCCCCCCCCC
Q 006194 420 LLDVAPLSLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQSTVTIKVYEGERSLTKDCRELGRFDLSGIPPAPRGVP 499 (657)
Q Consensus 420 ~~d~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~v~~g~~~~~~~~~~lg~~~l~~~~~~~~~~~ 499 (657)
+.|++|+++|+++.+|.|.++|+||++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.|+||+|+|.+
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEcCCCcEEEEEEecCCcceeEEEEeccCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHhhhchHH
Q 006194 500 QIEVTFEVDANGILHVTAEDKGAKNKQSITIINDKGRLSQEEIDRMVKEAEEFAEEDKKVRERVDSRNKLE 570 (657)
Q Consensus 500 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~ea~N~LE 570 (657)
+|+|+|++|.||+|+|++.+..||++..++|.++...||++|++++++++++|..+|+..+++.+++|+||
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDRMVEEAEKFASEDASIKAKVESRNKLE 152 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHHHHHHHHHHHTHHHHHHHHHHHHCSCCCC
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999987899999999999999999999999999999999986
No 15
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.97 E-value=5.8e-30 Score=230.73 Aligned_cols=151 Identities=66% Similarity=1.016 Sum_probs=142.4
Q ss_pred EEeecccceeEEeeCCEEEEEEecCCCCCcceeeeeeeccCCCceeEEEEEecCCcccccCcceeeEEecCCCCCCCCCC
Q 006194 420 LLDVAPLSLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQSTVTIKVYEGERSLTKDCRELGRFDLSGIPPAPRGVP 499 (657)
Q Consensus 420 ~~d~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~v~~g~~~~~~~~~~lg~~~l~~~~~~~~~~~ 499 (657)
+.|++|+++|+++.+|.|.++|+||++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.|+||+|+|.+
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEcCCCcEEEEEEecCCcceeEEEEeccCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHhhhchHH
Q 006194 500 QIEVTFEVDANGILHVTAEDKGAKNKQSITIINDKGRLSQEEIDRMVKEAEEFAEEDKKVRERVDSRNKLE 570 (657)
Q Consensus 500 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~ea~N~LE 570 (657)
+|+|+|++|.||+|+|++.+..||++.+++|+++...||++|+++++++++++..+|++.+++.+++|+||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLE 152 (152)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CHHHHHHHHHHHHHTHHHHHHHHHTCCCCSEEC
T ss_pred eEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999987889999999999999999999999999999999986
No 16
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.96 E-value=9.7e-30 Score=228.99 Aligned_cols=150 Identities=58% Similarity=0.900 Sum_probs=144.9
Q ss_pred EEeecccceeEEeeCCEEEEEEecCCCCCcceeeeeeeccCCCceeEEEEEecCCcccccCcceeeEEecCCCCCCCCCC
Q 006194 420 LLDVAPLSLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQSTVTIKVYEGERSLTKDCRELGRFDLSGIPPAPRGVP 499 (657)
Q Consensus 420 ~~d~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~v~~g~~~~~~~~~~lg~~~l~~~~~~~~~~~ 499 (657)
+.|++|+++|+++.+|.|.++||||+++|++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.|+||+|+|.+
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEcCCCcEEEEEEecCCcceeEEEEeccCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHhhhchHH
Q 006194 500 QIEVTFEVDANGILHVTAEDKGAKNKQSITIINDKGRLSQEEIDRMVKEAEEFAEEDKKVRERVDSRNKLE 570 (657)
Q Consensus 500 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~ea~N~LE 570 (657)
+|+|+|++|.||+|+|++.+..||++..++|+++ .+||++|+++++++++++..+|++.+++.+++|+||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~-~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSS-GGLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAE 151 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS-SSSCHHHHHHHHHHHHHHHHHHTTCCCEEECBCCCC
T ss_pred EEEEEEEeccCcEEEEEEEEccCCCEeEEEEecC-CCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999988 899999999999999999999999999999999885
No 17
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.95 E-value=1.4e-27 Score=217.37 Aligned_cols=151 Identities=66% Similarity=1.036 Sum_probs=145.6
Q ss_pred EEeecccceeEEeeCCEEEEEEecCCCCCcceeeeeeeccCCCceeEEEEEecCCcccccCcceeeEEecCCCCCCCCCC
Q 006194 420 LLDVAPLSLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQSTVTIKVYEGERSLTKDCRELGRFDLSGIPPAPRGVP 499 (657)
Q Consensus 420 ~~d~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~v~~g~~~~~~~~~~lg~~~l~~~~~~~~~~~ 499 (657)
+.|++|+++|+++.+|.|.+||++|++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.|+|+.|+|.+
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEcCCCcEEEEEEecCCcceeEEEEeccCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHhhhchHH
Q 006194 500 QIEVTFEVDANGILHVTAEDKGAKNKQSITIINDKGRLSQEEIDRMVKEAEEFAEEDKKVRERVDSRNKLE 570 (657)
Q Consensus 500 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~ea~N~LE 570 (657)
+|+|+|++|.||+|+|++.+..+|++..++|......||+++++++++++++|..+|+..+++.+++|+||
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELE 152 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCHHHHHHHHHHHHHTHHHHHHHHHHSCCCSEEC
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCHHHHHHHHHHHHHhHhccHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999887789999999999999999999999999999999985
No 18
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.95 E-value=2.2e-28 Score=254.88 Aligned_cols=226 Identities=18% Similarity=0.131 Sum_probs=166.5
Q ss_pred eCHHHHHHHHHHHHHHHHHHHhCCCCCcEE--EEeCCCCCHHHHHHHHHHHHHc--------C------CceeeecchhH
Q 006194 142 FSPEEISAMILQKMKETAEAYLGKKIKDAV--VTVPAYFNDAQRQATKDAGIIA--------G------LNVARIINEPT 205 (657)
Q Consensus 142 ~~~~el~~~~L~~l~~~a~~~~~~~~~~~v--itVPa~~~~~qr~~l~~Aa~~A--------G------l~~~~li~Ep~ 205 (657)
+.+++..++++..|++.++...+.. .++| ++||++|+..||+++++++..+ | ++.+.+++||+
T Consensus 95 ~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~ 173 (346)
T 2fsj_A 95 LASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGV 173 (346)
T ss_dssp TTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTH
T ss_pred ccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHH
Confidence 3446667777777776542222223 5699 9999999999999999997765 4 35588999999
Q ss_pred HHHHHhcccc---CCCcceEEEEEecCCeeEEEEEEEeCCeEEEEEEeCCCCCccchhhHHHHHHHHHHHHhhcCC--CC
Q 006194 206 AAAIAYGLDK---KGGEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRVMDYFIKLIKKKYNK--DI 280 (657)
Q Consensus 206 Aaal~y~~~~---~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~--~~ 280 (657)
|||++| +.. .....+++|||+||||||++++++.++. .+....++..+||.++++.|.++ ++++++. .+
T Consensus 174 AAa~~~-l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~----i~~~~g~~~~i 247 (346)
T 2fsj_A 174 GAALYL-LNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRK----IAKETGFVVPF 247 (346)
T ss_dssp HHHHHH-HHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHH----HHHHHCCCCCH
T ss_pred HHHHHh-hccccccccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHH----HHHHhCCCcCC
Confidence 999988 222 1134679999999999999999987776 45554577899999999998877 4555555 32
Q ss_pred CCCHHHHHHHHHHHHHHHHHccCCceeEEEEeeccCCceeEEEecHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCCCCcc
Q 006194 281 SKDNKAIGKLRRECERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARF-EELNMDLFKKTMGPVKKALEDAGLKKTDIR 359 (657)
Q Consensus 281 ~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~l~~~~~~~~~itr~~f-e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~ 359 (657)
. .+.+| .. ..+.+ .+. .++++++ +++++++++++.+.++++|+.+ ..+++
T Consensus 248 ~---------~~~~e-------~~--~~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i~ 298 (346)
T 2fsj_A 248 D---------LAQEA-------LS--HPVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRVT 298 (346)
T ss_dssp H---------HHHHH-------TT--SCEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGEE
T ss_pred C---------HHHHh-------cC--CeEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhccc
Confidence 1 01222 11 11222 233 2558999 9999999999999999999875 45689
Q ss_pred eEEEecCccCcHHHHHHHHhhcCCCCC-CCCCCchhhhHhHHHHHHh
Q 006194 360 EIVLVGGSTRIPKIQQLLKDFFDGKEP-SKGINPDEAVAHGAAVQGG 405 (657)
Q Consensus 360 ~V~LvGG~sr~p~v~~~l~~~f~~~~v-~~~~~~~~ava~GAa~~a~ 405 (657)
.|+|+||++++ +++.+++.|+...+ ....||++|+|+|+..++.
T Consensus 299 ~IvL~GGga~l--l~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 299 SLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp EEEEESTTHHH--HGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred EEEEECCcHHH--HHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 99999999998 99999999953222 1266999999999998764
No 19
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.95 E-value=7.2e-28 Score=255.47 Aligned_cols=317 Identities=18% Similarity=0.192 Sum_probs=207.4
Q ss_pred eEEEEEcCccceEEEEEECCeEEEEecCCCCcccceEEEEcCCceeEcHHHHHHHhhcccchhhHhHHhhCCCCCCHHHH
Q 006194 33 TVIGIDLGTTYSCVGVYRNGRVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAALNAERTVFDVKRLIGRKFDDPEVQ 112 (657)
Q Consensus 33 ~viGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~~~~~~ 112 (657)
.++|||+||++++++++++|.+.+ +..|...+|+... ......+++.+...+|+++++.
T Consensus 14 ~~vgiDiGt~~i~~~~~~~~~~~i--~~~g~~~~ps~~~------------~~g~i~d~~~~~~~ik~~~~~~------- 72 (377)
T 2ych_A 14 EALGLEIGASALKLVEVSGNPPAL--KALASRPTPPGLL------------MEGMVAEPAALAQEIKELLLEA------- 72 (377)
T ss_dssp CCEEEEECSSEEEEEEEETTTTEE--EEEEEEECCTTSE------------ETTEESCHHHHHHHHHHHHHHH-------
T ss_pred ceEEEEeCCCeEEEEEEeCCceEE--EEEEeEECCCCcc------------cCCCcCCHHHHHHHHHHHHHHc-------
Confidence 589999999999999988766444 2235555666321 2223467788888889888741
Q ss_pred hhhccCCeEEeecCCceeEEEEEcCceeEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHH-----------
Q 006194 113 RDIKFLPYKIVNKGGKPYIQVKVKGETKVFSPEEISAMILQKMKETAEAYLGKKIKDAVVTVPAYFNDA----------- 181 (657)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~el~~~~L~~l~~~a~~~~~~~~~~~vitVPa~~~~~----------- 181 (657)
..+ ...-.+.-.+...+...+.. ..++++++... ++..++++++.++.+++|.+|. .+.
T Consensus 73 -~~~-~~~v~~~i~~~~~~~~~~~~--~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~--~~~~~~~~~~~~~~ 142 (377)
T 2ych_A 73 -RTR-KRYVVTALSNLAVILRPIQV--PKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAP--LTPLSEVQEGEQVQ 142 (377)
T ss_dssp -TCC-CCEEEEEECGGGCEEEEEEE--ECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEE--SSCGGGSCTTSEEE
T ss_pred -CCC-cceEEEEecCCcEEEEEEEC--CCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEE--eCCCCCCCCcceeE
Confidence 000 11111122222222222221 45788887643 3457788889999999999872 222
Q ss_pred ---------HHHHHHHHHHHcCCceeeecchhHHHHHHhccccC-CCcceEEEEEecCCeeEEEEEEEeCCeEEEEEEeC
Q 006194 182 ---------QRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEMNILVYDLGGGTFDVSILTIDNGVFEVLATSG 251 (657)
Q Consensus 182 ---------qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~-~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~ 251 (657)
..+.+++|++.||+++..++.||+|+|.+|+.... ..+..++|+|+||||+|+++++. +.+. ..+
T Consensus 143 v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~--g~~~---~~~ 217 (377)
T 2ych_A 143 VMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRG--DKPL---AVR 217 (377)
T ss_dssp EEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEET--TEEE---EEE
T ss_pred EEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEEC--CEEE---EEE
Confidence 23889999999999999999999999999875432 23567999999999999999973 4322 245
Q ss_pred CCCCccchhhHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHccCCceeEEEEeeccCCceeEEEecHHHHHH
Q 006194 252 DTHLGGEDFDHRVMDYFIKLIKKKYNKDISKDNKAIGKLRRECERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEE 331 (657)
Q Consensus 252 ~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~l~~~~~~~~~itr~~fe~ 331 (657)
+..+||.+||+.|++. ++.+ ..+||++|+.++..............-.+....++|++|++
T Consensus 218 ~~~~GG~~i~~~i~~~--------~~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~ 278 (377)
T 2ych_A 218 VLTLSGKDFTEAIARS--------FNLD-----------LLAAEEVKRTYGMATLPTEDEELLLDFDAERERYSPGRIYD 278 (377)
T ss_dssp EESCSHHHHHHHHHHH--------TTCC-----------HHHHHHHHHHTC-------------------------CHHH
T ss_pred eeechHHHHHHHHHHH--------hCCC-----------HHHHHHHHhhcccccccccccccccccccccccCCHHHHHH
Confidence 6789999999998873 3322 36899999998754321111000001112345789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHc--CCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCC--------------------
Q 006194 332 LNMDLFKKTMGPVKKALEDA--GLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKG-------------------- 389 (657)
Q Consensus 332 ~~~~~~~~~~~~i~~~l~~~--~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~-------------------- 389 (657)
++++.++++...|.+.|+.. +.....++.|+|+||+|++|.+++.+++.| +.++...
T Consensus 279 ~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l-~~~v~~~~P~~~v~~~~~~~~~~~l~~ 357 (377)
T 2ych_A 279 AIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTL-GVNLEPVNPWEAVAVDPKRFESEQLQE 357 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHH-TSEEEECCGGGGSBCCTTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHh-CCCeEecCchhhcccCcccCCHHHHHh
Confidence 99999999999999999853 555667999999999999999999999999 4443322
Q ss_pred CCchhhhHhHHHHHHh
Q 006194 390 INPDEAVAHGAAVQGG 405 (657)
Q Consensus 390 ~~~~~ava~GAa~~a~ 405 (657)
.+|..++|.|+|+++.
T Consensus 358 ~~p~~a~a~Glal~~~ 373 (377)
T 2ych_A 358 IGPEFAVALGLALRGV 373 (377)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHcCC
Confidence 1345567888888763
No 20
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.94 E-value=5.8e-26 Score=229.54 Aligned_cols=203 Identities=23% Similarity=0.346 Sum_probs=173.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHHHHcCCceeeecchhHHHHHHhccccCCCcceEEE
Q 006194 145 EEISAMILQKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEMNILV 224 (657)
Q Consensus 145 ~el~~~~L~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~vlv 224 (657)
.+....+++++++.++...+..+..+++|+|++|+..+|+.++++++.+|+++..++.||+|++++++.. ..+|
T Consensus 70 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~------~~~v 143 (272)
T 3h1q_A 70 YIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN------DGIV 143 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS------SEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC------CEEE
Confidence 4566888899999998888888889999999999999999999999999999999999999999998753 2599
Q ss_pred EEecCCeeEEEEEEEeCCeEEEEEEeCCCCCccchhhHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHccCC
Q 006194 225 YDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRVMDYFIKLIKKKYNKDISKDNKAIGKLRRECERAKRALSSQ 304 (657)
Q Consensus 225 ~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~ 304 (657)
+|+||||++++++. .+.+. ......+||.+||+.+.+++. .+ ...++++|+.++
T Consensus 144 iDiGggst~~~~~~--~g~~~---~~~~~~~Gg~~~~~~l~~~l~--------~~-----------~~~ae~~k~~~~-- 197 (272)
T 3h1q_A 144 VDIGGGTTGIAVIE--KGKIT---ATFDEPTGGTHLSLVLAGSYK--------IP-----------FEEAETIKKDFS-- 197 (272)
T ss_dssp EEECSSCEEEEEEE--TTEEE---EECCBSCCHHHHHHHHHHHHT--------CC-----------HHHHHHHHHSST--
T ss_pred EEECCCcEEEEEEE--CCEEE---EEecCCCcHHHHHHHHHHHhC--------CC-----------HHHHHHHHHhcC--
Confidence 99999999999986 34322 346789999999999988752 11 267889998875
Q ss_pred ceeEEEEeeccCCceeEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCC
Q 006194 305 HQVRVEIESLFDGVDFSEPLTRARFEELNMDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGK 384 (657)
Q Consensus 305 ~~~~~~i~~l~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~ 384 (657)
+++++++++.+.++++...+.+.++..+ +++.|+|+||++++|.+++.+++.| +.
T Consensus 198 --------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l-~~ 252 (272)
T 3h1q_A 198 --------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFL-GK 252 (272)
T ss_dssp --------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHH-SS
T ss_pred --------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHh-CC
Confidence 5889999999999999999999988653 4789999999999999999999999 78
Q ss_pred CCCCCCCchhhhHhHHHHHH
Q 006194 385 EPSKGINPDEAVAHGAAVQG 404 (657)
Q Consensus 385 ~v~~~~~~~~ava~GAa~~a 404 (657)
++..+.||++++|+|||++|
T Consensus 253 ~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 253 EVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp CCBCCSSGGGHHHHHHHTTC
T ss_pred CccccCChHHHHHHHHHhcC
Confidence 88888999999999999874
No 21
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.92 E-value=3e-24 Score=228.36 Aligned_cols=198 Identities=16% Similarity=0.115 Sum_probs=157.4
Q ss_pred HHHHHHHHHHHHcCCceeeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEEEeCCeEEEEEEeCCCCCccchh
Q 006194 181 AQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDF 260 (657)
Q Consensus 181 ~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~~ 260 (657)
...+.+.+|++.|||++..++.||.|||++|..... .+..++++|+||||||+++++ ++.+.. .++..+||++|
T Consensus 168 ~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~-~~~gv~vvDiGggttdisi~~--~g~~~~---~~~i~~GG~~i 241 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPE-KDRGVVVVNLGYNFTGLIAYK--NGVPIK---ISYVPVGMKHV 241 (419)
T ss_dssp HHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHH-HHHCEEEEEECSSSEEEEEEE--TTEEEE---EEEESCCHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhcccc-ccCCEEEEEECCCcEEEEEEE--CCEEEE---EEecccHHHHH
Confidence 456788999999999999999999999998864332 356799999999999999987 454432 34578999999
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHccCC-----ceeEEEEeeccCCceeEEEecHHHHHHHHHH
Q 006194 261 DHRVMDYFIKLIKKKYNKDISKDNKAIGKLRRECERAKRALSSQ-----HQVRVEIESLFDGVDFSEPLTRARFEELNMD 335 (657)
Q Consensus 261 d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~-----~~~~~~i~~l~~~~~~~~~itr~~fe~~~~~ 335 (657)
|+.|+..+ +. ...+||++|..++.. .+..+.++...+ .....++|++|.++++|
T Consensus 242 t~dIa~~l--------~~-----------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~~--~~~~~is~~~l~~ii~p 300 (419)
T 4a2a_A 242 IKDVSAVL--------DT-----------SFEESERLIITHGNAVYNDLKEEEIQYRGLDG--NTIKTTTAKKLSVIIHA 300 (419)
T ss_dssp HHHHHHHH--------TC-----------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTTS--CSEEEEEHHHHHHHHHH
T ss_pred HHHHHHHH--------CC-----------CHHHHHHHHHHhccCcccCCCCceEEEeecCC--ccceEEcHHHHHHHHHH
Confidence 99998763 11 137899999998642 345677776532 46688999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCC------CCCcceEEEecCccCcHHHHHHHHhhcCCCCCC--C-----C----------CCc
Q 006194 336 LFKKTMGPVKKALEDAGLK------KTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPS--K-----G----------INP 392 (657)
Q Consensus 336 ~~~~~~~~i~~~l~~~~~~------~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~--~-----~----------~~~ 392 (657)
.++++...+.+.|+.++.+ ...++.|+|+||+|++|.+++.+++.| +.++. . + .+|
T Consensus 301 ~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~-g~~vri~~~~~~~p~~~~~~~~~~~~P 379 (419)
T 4a2a_A 301 RLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVF-KSPVRTGCYANSDRPSIINADEVANDP 379 (419)
T ss_dssp HHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHH-TSCEEECCGGGSSSCCCBTCHHHHTCG
T ss_pred HHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHH-CCCeEEEecCCCCchhccCcccccCCc
Confidence 9999999999999999873 456899999999999999999999999 55432 2 1 388
Q ss_pred hhhhHhHHHHHHhh
Q 006194 393 DEAVAHGAAVQGGI 406 (657)
Q Consensus 393 ~~ava~GAa~~a~~ 406 (657)
..+.|.|.++++..
T Consensus 380 ~~~t~~Gl~~~~~~ 393 (419)
T 4a2a_A 380 SFAAAFGNVFAVSE 393 (419)
T ss_dssp GGHHHHHTTCC---
T ss_pred hHHHHHHHHHHHhh
Confidence 99999999998854
No 22
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.92 E-value=7.4e-25 Score=235.29 Aligned_cols=243 Identities=15% Similarity=0.121 Sum_probs=171.6
Q ss_pred HHHHHHHHHHHHHHHHHhCC--CCCcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeeecchhHHHHHH-hc---cccCCC
Q 006194 146 EISAMILQKMKETAEAYLGK--KIKDAVVTVPAYFNDAQRQATKDAG-IIAGLNVARIINEPTAAAIA-YG---LDKKGG 218 (657)
Q Consensus 146 el~~~~L~~l~~~a~~~~~~--~~~~~vitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~-y~---~~~~~~ 218 (657)
+....+++++.. +.++. ....++||+|++|+..+|+++.+++ +.+|++.+.+++||+||+++ |. +....
T Consensus 87 d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~- 162 (418)
T 1k8k_A 87 DLMERFMEQVIF---KYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERT- 162 (418)
T ss_dssp HHHHHHHHHHHH---TTTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCC-
T ss_pred HHHHHHHHHHHH---hccCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCC-
Confidence 334445555542 22332 2457999999999999999999999 88999999999999999987 42 21121
Q ss_pred cceEEEEEecCCeeEEEEEEEeCCeEEEEEEeCCCCCccchhhHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHH
Q 006194 219 EMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRVMDYFIKLIKKKYNKDISKDNKAIGKLRRECERAK 298 (657)
Q Consensus 219 ~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K 298 (657)
. +.+|||+|+||||++++. .+.. +.....+..+||+++|+.|.+++.+++ +...... -...+|++|
T Consensus 163 ~-~glVvDiG~gtt~v~~v~--~G~~-~~~~~~~~~lGG~~lt~~l~~~l~~~~---~~~~~~~-------~~~~~e~iK 228 (418)
T 1k8k_A 163 L-TGTVIDSGDGVTHVIPVA--EGYV-IGSCIKHIPIAGRDITYFIQQLLRDRE---VGIPPEQ-------SLETAKAVK 228 (418)
T ss_dssp C-CEEEEEESSSCEEEEEEE--TTEE-CGGGCEEESCSHHHHHHHHHHHHHTTC---CCCCGGG-------HHHHHHHHH
T ss_pred C-eEEEEEcCCCceEEEEeE--CCEE-cccceEEEeCcHHHHHHHHHHHHHhcC---CCCCCHH-------HHHHHHHHH
Confidence 2 679999999999999985 4432 222235578999999999999976432 1111111 125677788
Q ss_pred HHccCCc-----------------eeEEEEeeccCCceeEEEecHHHH---HHHHHHHH------HHHHHHHHHHHHHcC
Q 006194 299 RALSSQH-----------------QVRVEIESLFDGVDFSEPLTRARF---EELNMDLF------KKTMGPVKKALEDAG 352 (657)
Q Consensus 299 ~~Ls~~~-----------------~~~~~i~~l~~~~~~~~~itr~~f---e~~~~~~~------~~~~~~i~~~l~~~~ 352 (657)
+.++... ...+.++....+....+.+++++| |.++.|.+ ..+.+.|.++|..+.
T Consensus 229 ~~~~~v~~~~~~e~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~ 308 (418)
T 1k8k_A 229 ERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCP 308 (418)
T ss_dssp HHHCCCCSCHHHHHHHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSC
T ss_pred HhhchhcccHHHHHHhhcccccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCC
Confidence 8775431 135667765556677889999999 45555432 468888899998864
Q ss_pred C--CCCCcceEEEecCccCcHHHHHHHHhhcCC-----------------------CCCCCCCCchhhhHhHHHHHHhh
Q 006194 353 L--KKTDIREIVLVGGSTRIPKIQQLLKDFFDG-----------------------KEPSKGINPDEAVAHGAAVQGGI 406 (657)
Q Consensus 353 ~--~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~-----------------------~~v~~~~~~~~ava~GAa~~a~~ 406 (657)
. ....++.|+|+||+|++|.+++.|++.++. .++..+.+|..++.+||+++|..
T Consensus 309 ~~~~~~l~~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 309 IDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp GGGTTHHHHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred HHHHHHHHhceEEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 3 344568899999999999999998876521 12233457789999999999864
No 23
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.91 E-value=5.7e-25 Score=232.35 Aligned_cols=306 Identities=15% Similarity=0.152 Sum_probs=191.7
Q ss_pred eEEEEEcCccceEEEEEECCeEE-EEecCCCCcccce-EEEEcCCceeEcHHHHHHHhhcccchhhHhHHhhCCCCCCHH
Q 006194 33 TVIGIDLGTTYSCVGVYRNGRVE-IIANDQGNRITPS-WVAFTDTERLIGEAAKNQAALNAERTVFDVKRLIGRKFDDPE 110 (657)
Q Consensus 33 ~viGIDlGTt~s~va~~~~g~~~-ii~~~~g~~~~Ps-~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~~~~ 110 (657)
..|+||+||+++++++..++.+. ++++--|....++ .+.+.....++|++|.... .. ..+
T Consensus 6 ~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~----~~--~~~------------ 67 (375)
T 2fxu_A 6 TALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----GI--LTL------------ 67 (375)
T ss_dssp CCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHT----TS--EEE------------
T ss_pred ceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcC----cc--cce------------
Confidence 46899999999999998555443 3322222221111 1112223567888885431 00 000
Q ss_pred HHhhhccCCeEEeecCCceeEEEEEcCceeEeCHHHHHHHHHHHHHHHHHHHhCCC--CCcEEEEeCCCCCHHHHHHHHH
Q 006194 111 VQRDIKFLPYKIVNKGGKPYIQVKVKGETKVFSPEEISAMILQKMKETAEAYLGKK--IKDAVVTVPAYFNDAQRQATKD 188 (657)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~el~~~~L~~l~~~a~~~~~~~--~~~~vitVPa~~~~~qr~~l~~ 188 (657)
..|.. +| .+.-.+.+..+++++.. +.++.. ...++||+|++++..+|+++.+
T Consensus 68 ------~~Pi~--------------~G---~i~d~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~~~e 121 (375)
T 2fxu_A 68 ------KYPIE--------------HG---IITNWDDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANREKMTQ 121 (375)
T ss_dssp ------ECSEE--------------TT---EECCHHHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHHHHHHH
T ss_pred ------ecccc--------------CC---cccCHHHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHHHHHHH
Confidence 11111 22 11223344555555542 223332 2469999999999999998887
Q ss_pred H-HHHcCCceeeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEEEeCCeEEEEEEeCCCCCccchhhHHHHHH
Q 006194 189 A-GIIAGLNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRVMDY 267 (657)
Q Consensus 189 A-a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~ 267 (657)
+ .+.+|++.+.+++||+||+++++. .+.+|+|+|+||||++.+. +|. .+........+||+++|+.|.++
T Consensus 122 ~~fe~~g~~~~~~~~e~~aaa~a~g~------~~~lVvDiG~gtt~v~~v~--~G~-~~~~~~~~~~~GG~~lt~~l~~~ 192 (375)
T 2fxu_A 122 IMFETFNVPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVTHNVPIY--EGY-ALPHAIMRLDLAGRDLTDYLMKI 192 (375)
T ss_dssp HHHHTTCCSEEEEEEHHHHHHHHTTC------SSEEEEEECSSCEEEEEEE--TTE-ECGGGCEEESCCHHHHHHHHHHH
T ss_pred HHHHhcCcceEEEccchheeeeecCC------CeEEEEEcCCCceEEeEeE--CCE-EeccceEEeccCHHHHHHHHHHH
Confidence 6 588899999999999999999975 3579999999999987663 453 22222345789999999999999
Q ss_pred HHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHc----------------cCCceeEEEEeeccCCceeEEEecHHHHH-
Q 006194 268 FIKLIKKKYNKDISKDNKAIGKLRRECERAKRAL----------------SSQHQVRVEIESLFDGVDFSEPLTRARFE- 330 (657)
Q Consensus 268 l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~L----------------s~~~~~~~~i~~l~~~~~~~~~itr~~fe- 330 (657)
+..+ .+......+. ..+|++|+.+ +......+.++ ++ ..+.++++.|.
T Consensus 193 l~~~---~~~~~~~~~~-------~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lp---dg--~~i~i~~erf~~ 257 (375)
T 2fxu_A 193 LTER---GYSFVTTAER-------EIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP---DG--QVITIGNERFRC 257 (375)
T ss_dssp HHHH---TCCCCSHHHH-------HHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT---TS--CEEEESTHHHHH
T ss_pred HHhc---CCCCCcHHHH-------HHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECC---CC--CEEEEChhheec
Confidence 7654 1211111111 3344455444 22233344443 22 34678888773
Q ss_pred --HHHHHH-----HHHHHHHHHHHHHHcCC--CCCCcceEEEecCccCcHHHHHHHHhhcCC-------CCCCCCCCchh
Q 006194 331 --ELNMDL-----FKKTMGPVKKALEDAGL--KKTDIREIVLVGGSTRIPKIQQLLKDFFDG-------KEPSKGINPDE 394 (657)
Q Consensus 331 --~~~~~~-----~~~~~~~i~~~l~~~~~--~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~-------~~v~~~~~~~~ 394 (657)
.+++|. ...+.+.|.++|..+.. ....++.|+|+||+|++|.+++.|++.++. .++..+.+|..
T Consensus 258 ~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~p~~ 337 (375)
T 2fxu_A 258 PETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 337 (375)
T ss_dssp HHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECCTTTTS
T ss_pred hHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcCCCCCc
Confidence 344442 24577777787776522 123357899999999999999999987731 23445678999
Q ss_pred hhHhHHHHHHhh
Q 006194 395 AVAHGAAVQGGI 406 (657)
Q Consensus 395 ava~GAa~~a~~ 406 (657)
++++||+++|..
T Consensus 338 ~~w~G~si~a~l 349 (375)
T 2fxu_A 338 SVWIGGSILASL 349 (375)
T ss_dssp HHHHHHHHHHHC
T ss_pred cEEcchHHhhCc
Confidence 999999999973
No 24
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.87 E-value=4.2e-22 Score=175.98 Aligned_cols=119 Identities=61% Similarity=0.953 Sum_probs=109.5
Q ss_pred CcceEEEeecccceeEEeeCCEEEEEEecCCCCCcceeeeeeeccCCCceeEEEEEecCCcccccCcceeeEEecCCCCC
Q 006194 415 TKGILLLDVAPLSLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQSTVTIKVYEGERSLTKDCRELGRFDLSGIPPA 494 (657)
Q Consensus 415 ~~~~~~~d~~~~~~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~v~~g~~~~~~~~~~lg~~~l~~~~~~ 494 (657)
.+++.+.|++|+++|+++.+|.|.++|+||++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.|+|++
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~ 93 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPA 93 (135)
T ss_dssp -------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSC
T ss_pred eCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCC
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeeEEEEEEcCCCcEEEEEEecCCcceeEEEEecc
Q 006194 495 PRGVPQIEVTFEVDANGILHVTAEDKGAKNKQSITIIND 533 (657)
Q Consensus 495 ~~~~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~ 533 (657)
|+|.++|+|+|++|.||+|+|++.+..||++.+++|+++
T Consensus 94 p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~ 132 (135)
T 1q5l_A 94 PRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS 132 (135)
T ss_dssp CSSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS
T ss_pred CCceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEecC
Confidence 999999999999999999999999999999999999876
No 25
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.87 E-value=3.2e-22 Score=206.64 Aligned_cols=228 Identities=17% Similarity=0.180 Sum_probs=148.6
Q ss_pred eEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCC-CCHH--HH--HHHHHH------------HHHcCCceeeecc
Q 006194 140 KVFSPEEISAMILQKMKETAEAYLGKKIKDAVVTVPAY-FNDA--QR--QATKDA------------GIIAGLNVARIIN 202 (657)
Q Consensus 140 ~~~~~~el~~~~L~~l~~~a~~~~~~~~~~~vitVPa~-~~~~--qr--~~l~~A------------a~~AGl~~~~li~ 202 (657)
..+++..+++.+ ..|+. +.. .+.+ .++|+++|.. |... |+ +++.+- ++.+++..+.+++
T Consensus 72 ~~~~~~~l~~i~-~aL~~-~~~-~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 147 (320)
T 2zgy_A 72 WQYSDVNVVAVH-HALLT-SGL-PVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMP 147 (320)
T ss_dssp GGGSHHHHHHHH-HHHHH-HSC-CSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEE
T ss_pred ccchHHHHHHHH-HHHHH-cCC-CCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEec
Confidence 456777777654 44443 211 1222 3689999976 6431 21 222211 2334556788999
Q ss_pred hhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEEEeCCeEEEEEEeCCCCCccchhhHHHHHHHHHHHHhhcCCCCCC
Q 006194 203 EPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRVMDYFIKLIKKKYNKDISK 282 (657)
Q Consensus 203 Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~ 282 (657)
||.||+++|..... .+..++|+|+||||+|+++++ ++.+.+....++..+||.+||+.|.+++.+ + +.++.
T Consensus 148 e~~aa~~~~~~~~~-~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~----~-~~~i~- 218 (320)
T 2zgy_A 148 ESIPAGYEVLQELD-ELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSL----A-RTKGS- 218 (320)
T ss_dssp SSHHHHHHHHHHSC-TTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTC----C-SBGGG-
T ss_pred CcHHHHHhhhcccc-CCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHH----c-CCCCC-
Confidence 99999998864322 367899999999999999998 444456666777899999999999988643 2 33221
Q ss_pred CHHHHHHHHHHHHHH-HHHccCCceeEEEEeeccCCceeEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcceE
Q 006194 283 DNKAIGKLRRECERA-KRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNMDLFKKTMGPVKKALEDAGLKKTDIREI 361 (657)
Q Consensus 283 ~~~~~~~L~~~~e~~-K~~Ls~~~~~~~~i~~l~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V 361 (657)
. ..+|++ |..- . . .+....+...-+.+++.+++++.++++.+.|.+.++.. .+++.|
T Consensus 219 -~-------~~ae~~lk~~~--~-------~-~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~~~~v 276 (320)
T 2zgy_A 219 -S-------YLADDIIIHRK--D-------N-NYLKQRINDENKISIVTEAMNEALRKLEQRVLNTLNEF----SGYTHV 276 (320)
T ss_dssp -H-------HHHHHHHHTTT--C-------H-HHHHHHSSSSCTHHHHHHHHHHHHHHHHHHHHHHHTTC----CCCCEE
T ss_pred -H-------HHHHHHHHHhh--h-------h-hcccceecCchhhHHHHHHHHHHHHHHHHHHHHHHHhh----cCCCeE
Confidence 1 234444 3320 0 0 00000000011345666677777777777777776552 568999
Q ss_pred EEecCccCcHHHHHHHHhhcCCC--CCCCCCCchhhhHhHHHHHH
Q 006194 362 VLVGGSTRIPKIQQLLKDFFDGK--EPSKGINPDEAVAHGAAVQG 404 (657)
Q Consensus 362 ~LvGG~sr~p~v~~~l~~~f~~~--~v~~~~~~~~ava~GAa~~a 404 (657)
+|+||+|++ +++.|++.|+.. ++....||++|+|+||+++|
T Consensus 277 vl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 277 MVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp EEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred EEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 999999987 999999999432 46677899999999999876
No 26
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.77 E-value=2.9e-18 Score=173.24 Aligned_cols=181 Identities=18% Similarity=0.157 Sum_probs=124.6
Q ss_pred HcCCceeeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEEEeCCeEEEEEEeCCCCCccchhhHHHHHHHHHH
Q 006194 192 IAGLNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRVMDYFIKL 271 (657)
Q Consensus 192 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~ 271 (657)
.++......++|++|+++++...... ...|+|+|||+++++++. .++.++.....+++..|+.+|+..+++++.-.
T Consensus 68 ~a~~~~~~~Vne~~aha~a~~~~~~~---~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~~ 143 (276)
T 4ehu_A 68 MNYSDADKQISELSCHARGVNFIIPE---TRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKIIEVD 143 (276)
T ss_dssp GGCCSCSEECCHHHHHHHHHHHHSTT---CCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHHHTCC
T ss_pred HHhhCCCcccchHHHHHHHHHHhCCC---CCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHHhccC
Confidence 35667788999999999988665533 457899999999999884 56778888888999999999999988886322
Q ss_pred HHhhcCCCCCCCHHHHHHHHHHHHHHHHHccCCceeEEEEeeccCCceeEE--------EecHHHHHHHHHHHHHHHHHH
Q 006194 272 IKKKYNKDISKDNKAIGKLRRECERAKRALSSQHQVRVEIESLFDGVDFSE--------PLTRARFEELNMDLFKKTMGP 343 (657)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~l~~~~~~~~--------~itr~~fe~~~~~~~~~~~~~ 343 (657)
+... ..+ .+......++ ...+..+ .-.....++++..+.+.+.+.
T Consensus 144 ~~~~------------~~~---------~~~a~~~~~i------~~~~~~f~~s~~~~~~~~~~~~~di~a~~~~~v~~~ 196 (276)
T 4ehu_A 144 VSEL------------GSI---------SMNSQNEVSI------SSTCTVFAESEVISHLSENAKIEDIVAGIHTSVAKR 196 (276)
T ss_dssp GGGH------------HHH---------HTTCSSCCCC------CCCSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred hhhh------------HHH---------HhcCCCCCCc------CCccchhhhhHHHHhhhccccHHHHHHHHHHHHHHH
Confidence 2110 000 0000000000 0000000 000111356666666666666
Q ss_pred HHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHHHhhhc
Q 006194 344 VKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQGGILS 408 (657)
Q Consensus 344 i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~a~~~~ 408 (657)
+....... ..++.|+|+||.+++|.|++.+++.| +.++..+.||++++|+|||++|....
T Consensus 197 l~~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~-g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 197 VSSLVKRI----GVQRNVVMVGGVARNSGIVRAMAREI-NTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHH-TSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHhc----ccCCeEEEecCccchHHHHHHHHHHH-CCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 65554443 35688999999999999999999999 78899999999999999999997543
No 27
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.75 E-value=1.8e-19 Score=191.08 Aligned_cols=215 Identities=18% Similarity=0.170 Sum_probs=88.4
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEEEeCCeEEE
Q 006194 168 KDAVVTVPAYFNDAQRQATKDAG-IIAGLNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTIDNGVFEV 246 (657)
Q Consensus 168 ~~~vitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v 246 (657)
..+++|+|++++..+|+++.+++ +.+|++.+.++.+|.||+++++. .+.+|+|+|+|||+++.+. +|.. +
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~------~~~lVVDiG~g~T~v~pv~--~G~~-~ 175 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL------LTGVVVDSGDGVTHICPVY--EGFS-L 175 (394)
T ss_dssp -------------------------------------------------------CCEEEECSSCEEEECEE--TTEE-C
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC------ceEEEEEcCCCceEeeeeE--CCEE-c
Confidence 35899999999999999888854 78899999999999999999875 3568999999999998774 3432 1
Q ss_pred EEEeCCCCCccchhhHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHccCCc----------------eeEEE
Q 006194 247 LATSGDTHLGGEDFDHRVMDYFIKLIKKKYNKDISKDNKAIGKLRRECERAKRALSSQH----------------QVRVE 310 (657)
Q Consensus 247 ~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~----------------~~~~~ 310 (657)
........+||+++|+.|.+++..+ .+......+. ..+|++|+.++... ...+.
T Consensus 176 ~~~~~~~~~GG~~lt~~l~~~l~~~---~~~~~~~~~~-------~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~~~ 245 (394)
T 1k8k_B 176 PHLTRRLDIAGRDITRYLIKLLLLR---GYAFNHSADF-------ETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYT 245 (394)
T ss_dssp STTCEEESCCHHHHHHHHHHHHHHT---TCCCCTTTTH-------HHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEE
T ss_pred ccceEEeeccHHHHHHHHHHHHHhc---CCCCCcHHHH-------HHHHHHHHhheeEecCHHHHHHhhccCCcCceEEE
Confidence 1112335899999999999987543 1222111222 34555665553221 12232
Q ss_pred EeeccCCceeEEEecHHHHH---HHHHHH-----HHHHHHHHHHHHHHcCCC--CCCcceEEEecCccCcHHHHHHHHhh
Q 006194 311 IESLFDGVDFSEPLTRARFE---ELNMDL-----FKKTMGPVKKALEDAGLK--KTDIREIVLVGGSTRIPKIQQLLKDF 380 (657)
Q Consensus 311 i~~l~~~~~~~~~itr~~fe---~~~~~~-----~~~~~~~i~~~l~~~~~~--~~~i~~V~LvGG~sr~p~v~~~l~~~ 380 (657)
++ ++. .++++++.|. .+++|. ...+.+.|.++|..+..+ ..-++.|+|+||+|.+|.+.+.|++.
T Consensus 246 lp---dg~--~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~e 320 (394)
T 1k8k_B 246 LP---DGR--IIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERE 320 (394)
T ss_dssp CT---TSC--EEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHH
T ss_pred CC---CCC--EEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHH
Confidence 22 232 4667777763 233332 234677788888876432 22347899999999999999998877
Q ss_pred cCC------------------CCCCCCCCchhhhHhHHHHHHhh
Q 006194 381 FDG------------------KEPSKGINPDEAVAHGAAVQGGI 406 (657)
Q Consensus 381 f~~------------------~~v~~~~~~~~ava~GAa~~a~~ 406 (657)
+.. .++..+.+|..++.+|++++|..
T Consensus 321 l~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 364 (394)
T 1k8k_B 321 LKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADI 364 (394)
T ss_dssp HHHHHHHHTCSSCCCTTCCCCC----------------------
T ss_pred HHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCC
Confidence 621 12233557789999999998863
No 28
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.70 E-value=6.9e-17 Score=167.96 Aligned_cols=203 Identities=16% Similarity=0.190 Sum_probs=134.9
Q ss_pred cEEEEeCCCCCHHHH-HHHHHHHHHcCC------------ceeeecchhHHHHHHhccccCC-----CcceEEEEEecCC
Q 006194 169 DAVVTVPAYFNDAQR-QATKDAGIIAGL------------NVARIINEPTAAAIAYGLDKKG-----GEMNILVYDLGGG 230 (657)
Q Consensus 169 ~~vitVPa~~~~~qr-~~l~~Aa~~AGl------------~~~~li~Ep~Aaal~y~~~~~~-----~~~~vlv~D~Ggg 230 (657)
.+++.+|..+...+| +++++++...+- ..+.+++||.||++.++.+... .+..++|+|+|||
T Consensus 115 ~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGgg 194 (355)
T 3js6_A 115 VIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSG 194 (355)
T ss_dssp EEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSS
T ss_pred EEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCC
Confidence 688899998887777 589998875542 4577899999999999765421 3678999999999
Q ss_pred eeEEEEEEEeCCeEEEEEEeCCCCCccchhhHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHccCCceeEEE
Q 006194 231 TFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRVMDYFIKLIKKKYNKDISKDNKAIGKLRRECERAKRALSSQHQVRVE 310 (657)
Q Consensus 231 t~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~ 310 (657)
|+|++++ .++.+. ....+...+||..+++.+.+++.+++. +..+. . ...++.+ . +.
T Consensus 195 Ttd~~v~--~~~~~~-~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~--~-------~~i~~g~-------~--~~ 250 (355)
T 3js6_A 195 TTIIDTY--QNMKRV-EEESFVINKGTIDFYKRIASHVSKKSE---GASIT--P-------RMIEKGL-------E--YK 250 (355)
T ss_dssp CEEEEEE--ETTEEC-GGGCEEESCCHHHHHHHHHHHTC-----------C--H-------HHHHSCC-------C----
T ss_pred cEEEEEE--cCCEEc-cccccCcchHHHHHHHHHHHHHHHhcC---CCcCC--H-------HHHhcCC-------c--cc
Confidence 9999998 344421 111233679999999999999665431 22222 1 1111111 0 00
Q ss_pred EeeccCCce--eEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHH--HHHHHHhhcCCCCC
Q 006194 311 IESLFDGVD--FSEPLTRARFEELNMDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPK--IQQLLKDFFDGKEP 386 (657)
Q Consensus 311 i~~l~~~~~--~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~--v~~~l~~~f~~~~v 386 (657)
..+.+ -.+.+ .+.+++.+++.++++...|++.+.. +..++.|+|+||++.++. +.+.+++.|+..
T Consensus 251 ----~~~~~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~-- 319 (355)
T 3js6_A 251 ----QCKLNQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA-- 319 (355)
T ss_dssp ---------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC--
T ss_pred ----cccccccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC--
Confidence 00000 01111 2345666777777777777666643 456799999999999998 889999988432
Q ss_pred CCCCCchhhhHhHHHHHHhhhcC
Q 006194 387 SKGINPDEAVAHGAAVQGGILSG 409 (657)
Q Consensus 387 ~~~~~~~~ava~GAa~~a~~~~~ 409 (657)
.||..|+|+|+..++..+.+
T Consensus 320 ---~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 320 ---DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp ---SSGGGHHHHHHHHHHHHHHH
T ss_pred ---CCcHHHHHHHHHHHHHHHHh
Confidence 79999999999999987653
No 29
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.57 E-value=7e-16 Score=159.09 Aligned_cols=203 Identities=15% Similarity=0.184 Sum_probs=137.9
Q ss_pred cEEEEeCCCCCH--HHHHHHHHHHHHc--------C------CceeeecchhHHHHHHhccccCCCcceEEEEEecCCee
Q 006194 169 DAVVTVPAYFND--AQRQATKDAGIIA--------G------LNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTF 232 (657)
Q Consensus 169 ~~vitVPa~~~~--~qr~~l~~Aa~~A--------G------l~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~ 232 (657)
.+++++|..+-. .+|+.+++....- | +..+.+++||.+|.+.+. .......++|+|+||||+
T Consensus 107 ~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~--~~~~~~~v~vvDiGggTt 184 (329)
T 4apw_A 107 QLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ--ENFKNKNVAVIDFGGLNM 184 (329)
T ss_dssp EEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC--CCCTTCEEEEEEECSSCE
T ss_pred EEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc--hhhccCCEEEEEeCCCcE
Confidence 678889976543 4677777765521 1 133667899988887652 122467899999999999
Q ss_pred EEEEEEEeCCeEEEEEEeCCCCCccchhhHHHHHHHHHHHHh-hcCCCCCCCHHHHHHHHHHHHHHHHHccCCceeEEEE
Q 006194 233 DVSILTIDNGVFEVLATSGDTHLGGEDFDHRVMDYFIKLIKK-KYNKDISKDNKAIGKLRRECERAKRALSSQHQVRVEI 311 (657)
Q Consensus 233 dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~-~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i 311 (657)
|++++. ++.+ +....+...+||.++++.|.+++ ++ +++..+.. ..++++|+. .. . .
T Consensus 185 d~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l----~~~~~g~~i~~---------~~~e~i~~~--g~--~--~- 241 (329)
T 4apw_A 185 GFSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDAL----TDLNNGNLITN---------EQAESALNN--GY--M--K- 241 (329)
T ss_dssp EEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSS----SSCSSCSCTTS---------BTTTTCSSS--CS--S--C-
T ss_pred EEEEEE--CCEE-eeccccchhhHHHHHHHHHHHHH----HhhccCCCCCH---------HHHHHHHhc--CC--c--c-
Confidence 999998 3443 22223346799999999998874 44 56655443 234444432 10 0 0
Q ss_pred eeccCCceeEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCC
Q 006194 312 ESLFDGVDFSEPLTRARFEELNMDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGIN 391 (657)
Q Consensus 312 ~~l~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~ 391 (657)
.+.+. ..+..+.+++.+++.++.+.+.+++. +.++..++.|+|+||++.+ +.+.|++.| +.++....|
T Consensus 242 ----~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~-~~~v~v~~~ 309 (329)
T 4apw_A 242 ----KGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTY-PNNSIITNN 309 (329)
T ss_dssp ----EECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHS-TTCEECCSS
T ss_pred ----cCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHc-CCCCEecCC
Confidence 01111 13456777777777777777777665 3445558999999999987 669999999 445667789
Q ss_pred chhhhHhHHHHHHhhhc
Q 006194 392 PDEAVAHGAAVQGGILS 408 (657)
Q Consensus 392 ~~~ava~GAa~~a~~~~ 408 (657)
|..|+|+|+..++....
T Consensus 310 P~~a~a~G~~~~~~~k~ 326 (329)
T 4apw_A 310 SQWTTCEGLYKVAVAKY 326 (329)
T ss_dssp GGGHHHHHHHHHHHHHH
T ss_pred ChhhHHHHHHHHHhhhh
Confidence 99999999999886544
No 30
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.54 E-value=3e-14 Score=122.11 Aligned_cols=84 Identities=44% Similarity=0.819 Sum_probs=77.0
Q ss_pred HHHHHHhhhchHHHHHHHHHHHHhhh-hhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 006194 558 KVRERVDSRNKLETYIYNMRSTINDK-LADKIDSDDKERIESTLKEALEWLDDNQNAEKDDFDEKMKEVEAVCNPVIKQV 636 (657)
Q Consensus 558 ~~~~~~ea~N~LE~~iy~~r~~l~~~-~~~~~~~~e~~~i~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~~i~~r~ 636 (657)
+++++.++||+||+|||.++..|.++ +..++++++++.|...++++.+||+++.+++.++|+.++++|++++.||..|+
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~~~~a~~e~i~~k~~eL~~~~~~i~~k~ 82 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGL 82 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45788999999999999999999764 88999999999999999999999999877899999999999999999999999
Q ss_pred HhhcC
Q 006194 637 YEKNG 641 (657)
Q Consensus 637 ~e~~~ 641 (657)
|+++|
T Consensus 83 y~~~~ 87 (113)
T 3lof_A 83 YQGAG 87 (113)
T ss_dssp HHC--
T ss_pred HHhcc
Confidence 98643
No 31
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.44 E-value=2.5e-13 Score=145.62 Aligned_cols=178 Identities=17% Similarity=0.161 Sum_probs=119.5
Q ss_pred eEEEEEcCccceEEEEEECCeEEEEecCCCCcccceEEEEcCC----ceeEcHHHHHHHhhcccchhhHhHHhhCCCCCC
Q 006194 33 TVIGIDLGTTYSCVGVYRNGRVEIIANDQGNRITPSWVAFTDT----ERLIGEAAKNQAALNAERTVFDVKRLIGRKFDD 108 (657)
Q Consensus 33 ~viGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~Ps~v~~~~~----~~~~G~~A~~~~~~~p~~~~~~~k~~lg~~~~~ 108 (657)
..|+||+||.++++++..++.|..+ +||+|+.... ..++|+++.... +. .
T Consensus 24 ~~iVID~GS~~~kaG~ag~~~P~~v--------~PSvVg~~~~~~~~~~~vG~e~~~~~---r~---------------~ 77 (498)
T 3qb0_A 24 SAVVIDPGSYTTNIGYSGSDFPQSI--------LPSVYGKYTADEGNKKIFSEQSIGIP---RK---------------D 77 (498)
T ss_dssp SCEEEECCSSEEEEEETTCSSCSEE--------EESEEEEESSCSSCCEECCTTGGGSC---CT---------------T
T ss_pred CeEEEECCCcEEEEEECCCCCeeee--------cCceeEEeccCCCccEEEecHHHhcC---cC---------------c
Confidence 4699999999999998865544332 4999987532 467777531110 00 0
Q ss_pred HHHHhhhccCCeEEeecCCceeEEEEEcCceeEeCHHHHHHHHHHHHHHHHHHHhCC--CCC-cEEEEeCCCCCHHHHHH
Q 006194 109 PEVQRDIKFLPYKIVNKGGKPYIQVKVKGETKVFSPEEISAMILQKMKETAEAYLGK--KIK-DAVVTVPAYFNDAQRQA 185 (657)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~el~~~~L~~l~~~a~~~~~~--~~~-~~vitVPa~~~~~qr~~ 185 (657)
..-..|+. +| .+.-.+.+..+++|+... .++. .-. .+++|.|...+...|+.
T Consensus 78 -----l~l~~Pi~--------------~G---vI~dwd~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~~~Re~ 132 (498)
T 3qb0_A 78 -----YELKPIIE--------------NG---LVIDWDTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNSTENRKK 132 (498)
T ss_dssp -----EEEEESEE--------------TT---EESCHHHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCHHHHHH
T ss_pred -----eEEeccCc--------------CC---EEccHHHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcHHHHHH
Confidence 00001110 22 233456666677776543 2332 123 68999999999999999
Q ss_pred HHHHH-HHcCCceeeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEEEeCCeEEEEEEeCCCCCccchhhHHH
Q 006194 186 TKDAG-IIAGLNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRV 264 (657)
Q Consensus 186 l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l 264 (657)
+.+.+ +.+|++.+.++.+|.+|+++++.. +-+|+|+|+|+++++.+. .|.. +........+||+++|..|
T Consensus 133 ~~eilFE~f~vpav~l~~~~vlalya~G~~------tglVVDiG~g~T~vvPI~--~G~~-l~~ai~rl~vgG~~lt~~L 203 (498)
T 3qb0_A 133 SLEVLLEGMQFEACYLAPTSTCVSFAAGRP------NCLVVDIGHDTCSVSPIV--DGMT-LSKSTRRNFIAGKFINHLI 203 (498)
T ss_dssp HHHHHHTTSCCSEEEEEEHHHHHHHHHTCS------SEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCSHHHHHHHH
T ss_pred HHHHHHhhcCCCeEeecchHHHHHHHcCCC------eEEEEEcCCCcEEEEEEe--CCEE-ccccceeccccHHHHHHHH
Confidence 98864 789999999999999999988752 249999999999999885 3321 1111122579999999999
Q ss_pred HHHHHH
Q 006194 265 MDYFIK 270 (657)
Q Consensus 265 ~~~l~~ 270 (657)
.++|.+
T Consensus 204 ~~lL~~ 209 (498)
T 3qb0_A 204 KKALEP 209 (498)
T ss_dssp HHHTTT
T ss_pred HHHHHh
Confidence 998753
No 32
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.40 E-value=5.8e-14 Score=149.23 Aligned_cols=244 Identities=17% Similarity=0.081 Sum_probs=149.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCC--CCcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeeecchhHHHHHHhccccCC--C
Q 006194 144 PEEISAMILQKMKETAEAYLGKK--IKDAVVTVPAYFNDAQRQATKDAG-IIAGLNVARIINEPTAAAIAYGLDKKG--G 218 (657)
Q Consensus 144 ~~el~~~~L~~l~~~a~~~~~~~--~~~~vitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~--~ 218 (657)
-.+.+..+++|+.. +.++.. -..+++|.|...+...|+.+.+.+ +.+|++.+.++.+|.+|+++.+..... .
T Consensus 101 dwd~~e~iw~~~~~---~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~ 177 (427)
T 3dwl_A 101 NWDHMERFWQQSLF---KYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDR 177 (427)
T ss_dssp CHHHHHHHHHHHHH---TTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSC
T ss_pred cHHHHHHHHHHHHh---HhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCC
Confidence 35555666666543 223322 247899999999999999999877 789999999999999999988754211 1
Q ss_pred cceEEEEEecCCeeEEEEEEEeCCeEEEEEEeCCCCCccchhhHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHH
Q 006194 219 EMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRVMDYFIKLIKKKYNKDISKDNKAIGKLRRECERAK 298 (657)
Q Consensus 219 ~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K 298 (657)
..+-+|+|+|+|+|+++.+. +|.. +........+||+++|+.|.+++..+... .. =...++.+|
T Consensus 178 ~~tglVVDiG~g~T~v~PV~--~G~~-l~~~~~rl~~gG~~lt~~L~~lL~~~~~~----~~---------~~~~~~~IK 241 (427)
T 3dwl_A 178 SLTGTVVDSGDGVTHIIPVA--EGYV-IGSSIKTMPLAGRDVTYFVQSLLRDRNEP----DS---------SLKTAERIK 241 (427)
T ss_dssp CCCEEEEEESSSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHHTTC---------------------CHHHHHHH
T ss_pred CceEEEEECCCCceEEEEEE--CCEE-ehhhheeccccHHHHHHHHHHHHHHcCCC----ch---------hHHHHHHHH
Confidence 34579999999999999883 2321 11111224799999999999886543211 00 014566666
Q ss_pred HHccCCcee-----------EEEEee--c--cCCceeEEEecHHHHH---HHHHHH------HHHHHHHHHHHHHHcCCC
Q 006194 299 RALSSQHQV-----------RVEIES--L--FDGVDFSEPLTRARFE---ELNMDL------FKKTMGPVKKALEDAGLK 354 (657)
Q Consensus 299 ~~Ls~~~~~-----------~~~i~~--l--~~~~~~~~~itr~~fe---~~~~~~------~~~~~~~i~~~l~~~~~~ 354 (657)
+.++..... ...+.. + .++....+.+..+.|. -++.|- ...+.+.|.++|..+..+
T Consensus 242 e~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~d 321 (427)
T 3dwl_A 242 EECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPID 321 (427)
T ss_dssp HHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHH
T ss_pred HhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHH
Confidence 665432100 000110 1 2233345667777762 344441 234677777777765322
Q ss_pred --CCCcceEEEecCccCcHHHHHHHHhhc----C---------------C--CCCCCCCCchhhhHhHHHHHHhh
Q 006194 355 --KTDIREIVLVGGSTRIPKIQQLLKDFF----D---------------G--KEPSKGINPDEAVAHGAAVQGGI 406 (657)
Q Consensus 355 --~~~i~~V~LvGG~sr~p~v~~~l~~~f----~---------------~--~~v~~~~~~~~ava~GAa~~a~~ 406 (657)
..-...|+|+||+|.+|.+.+.|.+.+ + . .++..+.++..++=+|++++|..
T Consensus 322 lr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilasl 396 (427)
T 3dwl_A 322 VRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQT 396 (427)
T ss_dssp HHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHHS
T ss_pred HHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeeccc
Confidence 111366999999999999988887654 1 1 12233446678999999999863
No 33
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=99.39 E-value=2.9e-13 Score=117.07 Aligned_cols=99 Identities=36% Similarity=0.676 Sum_probs=73.9
Q ss_pred HHHHHhhhchHHHHHHHHHHHHhhh-hhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 006194 559 VRERVDSRNKLETYIYNMRSTINDK-LADKIDSDDKERIESTLKEALEWLDDNQNAEKDDFDEKMKEVEAVCNPVIKQVY 637 (657)
Q Consensus 559 ~~~~~ea~N~LE~~iy~~r~~l~~~-~~~~~~~~e~~~i~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~ 637 (657)
.+++.++||+||+|||.+++.|.++ +.+.++++++++|...++++++||+++.+++.++|+.++++|++++.+|..|+|
T Consensus 13 ~re~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~~~ad~e~ik~k~~eL~~~~~~i~~k~y 92 (120)
T 2p32_A 13 GLVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLY 92 (120)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567899999999999999999753 788999999999999999999999976667899999999999999999999998
Q ss_pred hhcCCCCCC-------CCCCCCCCCCC
Q 006194 638 EKNGGSSSA-------DSEDEEPNDEL 657 (657)
Q Consensus 638 e~~~~~~~~-------~~~~~~~~~~~ 657 (657)
+.+|++++| ++.++++++||
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~ee~ 119 (120)
T 2p32_A 93 QSAGGAPPGAAPGGAAGGAGGPTIEEV 119 (120)
T ss_dssp CC-------------------------
T ss_pred HhccCCCCCCCCCCCCCCCCCCCCCCC
Confidence 654443332 23345666664
No 34
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=99.32 E-value=1.7e-12 Score=111.31 Aligned_cols=83 Identities=42% Similarity=0.822 Sum_probs=72.1
Q ss_pred HHhhhchHHHHHHHHHHHHhh-hhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 006194 562 RVDSRNKLETYIYNMRSTIND-KLADKIDSDDKERIESTLKEALEWLDDNQNAEKDDFDEKMKEVEAVCNPVIKQVYEKN 640 (657)
Q Consensus 562 ~~ea~N~LE~~iy~~r~~l~~-~~~~~~~~~e~~~i~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e~~ 640 (657)
+.++||+||+|||.++..|.+ ++.+.++++++++|...++++++||+++.+++.++|++++++|++++.+|..|+++.+
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~~~ad~~~i~~~~~~L~~~~~~i~~~~~~~~ 81 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSA 81 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred hHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 568999999999999999974 3888999999999999999999999865445789999999999999999999999765
Q ss_pred CCCC
Q 006194 641 GGSS 644 (657)
Q Consensus 641 ~~~~ 644 (657)
|+++
T Consensus 82 ~~~~ 85 (113)
T 1ud0_A 82 GGMP 85 (113)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 5444
No 35
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.13 E-value=1.6e-11 Score=128.31 Aligned_cols=198 Identities=20% Similarity=0.185 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHHHc-CC--ceeeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEEEeCCeEEEEEEeCCCCCc
Q 006194 180 DAQRQATKDAGIIA-GL--NVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLG 256 (657)
Q Consensus 180 ~~qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lG 256 (657)
..+-+.+.+|.+.+ |+ ++-. .||.||+++...... .+..++++|+||||||++++.-..-.. ......|
T Consensus 367 ~~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE-~eLGvaiIDmGGGTTd~sVf~~G~lv~-----a~~ip~g 438 (610)
T 2d0o_A 367 RLQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPG-TTRPLAILDLGAGSTDASIINPKGDII-----ATHLAGA 438 (610)
T ss_dssp CCCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTT-CCSSEEEEEECSSEEEEEEECTTCCEE-----EEEEECS
T ss_pred HHHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC-CcCCeEEEEeCCCcceEEEEcCCcEEE-----EEEeccc
Confidence 34577888999999 99 6656 999999998755544 477799999999999999997544332 2335789
Q ss_pred cchhhHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHccCC----------ceeEEEE--eeccCC---c---
Q 006194 257 GEDFDHRVMDYFIKLIKKKYNKDISKDNKAIGKLRRECERAKRALSSQ----------HQVRVEI--ESLFDG---V--- 318 (657)
Q Consensus 257 G~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~----------~~~~~~i--~~l~~~---~--- 318 (657)
|++++..|..-| +.+ + +..||++|. .... .+..+.+ +.+... .
T Consensus 439 G~~VT~DIA~~L--------gt~--d--------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~Rv~~ 499 (610)
T 2d0o_A 439 GDMVTMIIAREL--------GLE--D--------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFARVCV 499 (610)
T ss_dssp HHHHHHHHHHHH--------TCC--C--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEEE
T ss_pred hHHHHHHHHHHh--------CCC--C--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeeec
Confidence 999999988663 221 0 168999998 5321 1223444 222110 1
Q ss_pred ---eeEEEecHHH--HHHHHHHHHHHHHHH--HHHHHHHcCC-----CCCCcceEEEecCccCcHHHHHHHHhhcCCCCC
Q 006194 319 ---DFSEPLTRAR--FEELNMDLFKKTMGP--VKKALEDAGL-----KKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEP 386 (657)
Q Consensus 319 ---~~~~~itr~~--fe~~~~~~~~~~~~~--i~~~l~~~~~-----~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v 386 (657)
+.-..| +.+ +|+ ++-+-+++.+. +..+|+..+. +..+|..|+|+||+|.++.+.++..+.|+.-++
T Consensus 500 ~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y~V 577 (610)
T 2d0o_A 500 VKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRL 577 (610)
T ss_dssp ECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTSSC
T ss_pred ccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCe
Confidence 112245 555 666 55444443333 2333554332 234679999999999999999999999943132
Q ss_pred -------CCCCCchhhhHhHHHHHHhh
Q 006194 387 -------SKGINPDEAVAHGAAVQGGI 406 (657)
Q Consensus 387 -------~~~~~~~~ava~GAa~~a~~ 406 (657)
....+|..|+|.|.+++.+.
T Consensus 578 RiGrP~~~gv~gP~fAtAvGLlly~~~ 604 (610)
T 2d0o_A 578 VAGRGNIRGSEGPRNAVATGLILSWHK 604 (610)
T ss_dssp EEEECCGGGTSTTSCHHHHHHHHHHHH
T ss_pred EEecCCccccCCCcHHHHHHHHHHHhh
Confidence 12348999999999987643
No 36
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.11 E-value=2.5e-11 Score=127.36 Aligned_cols=194 Identities=20% Similarity=0.160 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHc-CC--ceeeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEEEeCCeEEEEEEeCCCCCccc
Q 006194 182 QRQATKDAGIIA-GL--NVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGE 258 (657)
Q Consensus 182 qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~ 258 (657)
+-+.+.+|.+.+ |+ ++-. .||.||+++...... .+..++++|+||||||++++.-..-.. ......||+
T Consensus 371 ~m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE-~elGvaiIDmGgGTTd~sVf~~g~lv~-----a~~ip~gG~ 442 (607)
T 1nbw_A 371 QMQVIARELSARLQTEVVVGG--VEANMAIAGALTTPG-CAAPLAILDLGAGSTDAAIVNAEGQIT-----AVHLAGAGN 442 (607)
T ss_dssp CSCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTT-CCSSEEEEEECSSEEEEEEECSSSCEE-----EEEEECCHH
T ss_pred HHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC-CcCCeEEEEeCCCcceEEEEcCCcEEE-----EEEeccchH
Confidence 456788888888 99 5555 999999998755544 477799999999999999997554332 233578999
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHccCC----------ceeEEEE--eeccCC---c-----
Q 006194 259 DFDHRVMDYFIKLIKKKYNKDISKDNKAIGKLRRECERAKRALSSQ----------HQVRVEI--ESLFDG---V----- 318 (657)
Q Consensus 259 ~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~----------~~~~~~i--~~l~~~---~----- 318 (657)
+++..|..-| +.+ + +..||++|. +... .+..+.+ +.+... .
T Consensus 443 ~VT~DIA~~L--------g~~--d--------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R~~~~~ 503 (607)
T 1nbw_A 443 MVSLLIKTEL--------GLE--D--------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAKVVYIK 503 (607)
T ss_dssp HHHHHHHHHH--------TCS--C--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEEEEE
T ss_pred HHHHHHHHHh--------CCC--C--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeeeccc
Confidence 9999988663 221 0 168999998 5321 1223444 222110 1
Q ss_pred -eeEEEecHHH--HHHHHHHHHHHHHHH--HHHHHHHcCCC-----CCCcceEEEecCccCcHHHHHHHHhhcCCCCC--
Q 006194 319 -DFSEPLTRAR--FEELNMDLFKKTMGP--VKKALEDAGLK-----KTDIREIVLVGGSTRIPKIQQLLKDFFDGKEP-- 386 (657)
Q Consensus 319 -~~~~~itr~~--fe~~~~~~~~~~~~~--i~~~l~~~~~~-----~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v-- 386 (657)
+.-..| +.+ +|+ ++-+-+++.+. +..+|+..+.. ..+|..|+|+||+|.++.+.++..+.|+.-++
T Consensus 504 ~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~VRi 581 (607)
T 1nbw_A 504 EGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGVVA 581 (607)
T ss_dssp TTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTTCEE
T ss_pred ccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEE
Confidence 111244 455 666 44444443333 45557776653 34569999999999999999999999943132
Q ss_pred -----CCCCCchhhhHhHHHHHH
Q 006194 387 -----SKGINPDEAVAHGAAVQG 404 (657)
Q Consensus 387 -----~~~~~~~~ava~GAa~~a 404 (657)
....+|..|+|.|.+++.
T Consensus 582 GrP~~~g~~gP~fAtAvGLlly~ 604 (607)
T 1nbw_A 582 GQGNIRGTEGPRNAVATGLLLAG 604 (607)
T ss_dssp EECCGGGTSCSCCHHHHHHHHHH
T ss_pred ecCCccccCCchHHHHHHHHHhh
Confidence 123489999999999864
No 37
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.11 E-value=8.5e-10 Score=123.51 Aligned_cols=109 Identities=18% Similarity=0.223 Sum_probs=80.3
Q ss_pred HHHHHHHH-HHhCCCCC-----cEEEEeCCCCCHHHHHHHHHH-HHHcCCceeeecchhHHHHHHhccccCCCcceEEEE
Q 006194 153 QKMKETAE-AYLGKKIK-----DAVVTVPAYFNDAQRQATKDA-GIIAGLNVARIINEPTAAAIAYGLDKKGGEMNILVY 225 (657)
Q Consensus 153 ~~l~~~a~-~~~~~~~~-----~~vitVPa~~~~~qr~~l~~A-a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~ 225 (657)
..|++++- ..++.... .+++|.|..++...|+.+.+. .+..|++.+.++.++.+|++++|.. +-+||
T Consensus 178 e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~------tglVV 251 (593)
T 4fo0_A 178 EVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLS------STCIV 251 (593)
T ss_dssp HHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCS------EEEEE
T ss_pred HHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCC------ceEEE
Confidence 44555543 45665443 399999999999999888774 5678999999999999999998743 56899
Q ss_pred EecCCeeEEEEEEEeCCeEEEEEEeCCCCCccchhhHHHHHHHHH
Q 006194 226 DLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRVMDYFIK 270 (657)
Q Consensus 226 D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~ 270 (657)
|+|++.|+|+-|.- |.. +........+||.++++.|.++|..
T Consensus 252 DiG~~~T~v~PV~d--G~~-l~~~~~rl~~GG~~lt~~L~~lL~~ 293 (593)
T 4fo0_A 252 DVGDQKTSVCCVED--GVS-HRNTRLCLAYGGSDVSRCFYWLMQR 293 (593)
T ss_dssp EECSSCEEEEEEES--SCB-CGGGCEEESCCHHHHHHHHHHHHHH
T ss_pred EeCCCceeeeeeEC--CEE-ehhheEEecccHHHHHHHHHHHHHh
Confidence 99999999887752 211 0001122479999999999888653
No 38
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.91 E-value=5.4e-08 Score=96.98 Aligned_cols=171 Identities=15% Similarity=0.217 Sum_probs=100.2
Q ss_pred eeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEEEeCCeEEEEEEeCCCCCccchhhHHHHHHHHHHHHhhcC
Q 006194 198 ARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRVMDYFIKLIKKKYN 277 (657)
Q Consensus 198 ~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~ 277 (657)
..+++|.+|.+.+....... .-.++|+||+++.+..+ .++.+........+..|+-. +.+++...+ +
T Consensus 77 ~~~v~Ei~ah~~ga~~~~~~---~~~vidiGGqd~k~i~~--~~g~v~~~~mn~~ca~GtG~----~le~~a~~l----g 143 (270)
T 1hux_A 77 DKQMSELSCHAMGASFIWPN---VHTVIDIGGQDVKVIHV--ENGTMTNFQMNDKCAAGTGR----FLDVMANIL----E 143 (270)
T ss_dssp SEEECHHHHHHHHHHHHCTT---CCEEEEEETTEEEEEEE--ETTEEEEEEEESSCCTTSHH----HHHHHHHHH----T
T ss_pred CCCcccHHHHHHHHHHhCCC---CCEEEEECCCceEEEEE--eCCceeeeccccccchhhHH----HHHHHHHHh----C
Confidence 45699999988654332222 12579999998887776 56665433344434444433 444444433 3
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHccCCceeEEEEeeccCCceeEEEecHHHH----------HHHHHHHHHHHHHHHHHH
Q 006194 278 KDISKDNKAIGKLRRECERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARF----------EELNMDLFKKTMGPVKKA 347 (657)
Q Consensus 278 ~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~l~~~~~~~~~itr~~f----------e~~~~~~~~~~~~~i~~~ 347 (657)
.++.. |.+.+.+.+ . +...... ...+.+.++ ++++..+++.+...+.+.
T Consensus 144 ~~~~e-------l~~la~~~~-----~-------p~~~~~~--c~vfa~s~v~~l~~~g~~~~di~~av~e~Va~~i~~~ 202 (270)
T 1hux_A 144 VKVSD-------LAELGAKST-----K-------RVAISST--CTVFAESEVISQLSKGTDKIDIIAGIHRSVASRVIGL 202 (270)
T ss_dssp CCTTT-------HHHHHTTCC-----S-------CCCCCCC--SHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHH-------HHHHHhhCC-----C-------CCCcccc--cchhHhHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 33311 111111111 0 0000000 001223332 445555666665555555
Q ss_pred HHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHHHhhh
Q 006194 348 LEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQGGIL 407 (657)
Q Consensus 348 l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~a~~~ 407 (657)
++..+. .+.|+++||.+++|.+++.+.+.+ +.++..+.+++.+.|+|||++|...
T Consensus 203 ~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~l-g~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 203 ANRVGI----VKDVVMTGGVAQNYGVRGALEEGL-GVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHTTCC----CSSEEEESGGGGCHHHHHHHHHHH-CSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HhcCCC----CCeEEEeCccccCHHHHHHHHHHH-CCCeEeCCCcchHhHHHHHHHHHHh
Confidence 543221 367999999999999999999999 7788888788889999999999764
No 39
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=98.74 E-value=3.4e-08 Score=107.65 Aligned_cols=82 Identities=11% Similarity=0.036 Sum_probs=58.3
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHH
Q 006194 324 LTRARFEELNMDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQ 403 (657)
Q Consensus 324 itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~ 403 (657)
.+|.++- +-+++.+.-.+...++...-....++.|.++||+++++.+.+.+.+.| +.+|..+ .+.|+.|+|||+.
T Consensus 363 ~~~~~l~---RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~l 437 (504)
T 3ll3_A 363 HQKPEMA---RAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIF-NVPIVTM-KEQQSGTLAAMFL 437 (504)
T ss_dssp CCHHHHH---HHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCSHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHH
T ss_pred CCHHHHH---HHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhcCHHHHHHHHHhh-CCeEEec-CCCCchhHHHHHH
Confidence 4566554 444444444444443332111235899999999999999999999999 7888765 4677999999999
Q ss_pred HhhhcCC
Q 006194 404 GGILSGE 410 (657)
Q Consensus 404 a~~~~~~ 410 (657)
|+.-.+.
T Consensus 438 A~~a~G~ 444 (504)
T 3ll3_A 438 ARQALGL 444 (504)
T ss_dssp HHHHTTS
T ss_pred HHHHcCc
Confidence 9876654
No 40
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=98.50 E-value=5.8e-07 Score=98.09 Aligned_cols=204 Identities=13% Similarity=0.118 Sum_probs=110.9
Q ss_pred HHHHHcCC----ceeeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEE-E---e-C-CeEEEEEEe-CC--CC
Q 006194 188 DAGIIAGL----NVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILT-I---D-N-GVFEVLATS-GD--TH 254 (657)
Q Consensus 188 ~Aa~~AGl----~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~-~---~-~-~~~~v~~~~-~~--~~ 254 (657)
++|+..|| +++.-..+..|+++..+..... .+++-+|.+++-..+.. - . . +.+...... .+ ..
T Consensus 224 ~~a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g----~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (511)
T 3hz6_A 224 LAARQTGFVSGTPVLCGLGDAGAATLGVGVLDDE----DAYLHLGTTGWLARLTQTDPVGDMPVGTIFRLAGIIAGKTLQ 299 (511)
T ss_dssp HHHHHHCCCTTCEEECCEEHHHHHHHHTTCCSTT----CEEEEESSSEEEEEEEECCCCCSCCSSCCEEECSSSTTEEEE
T ss_pred HHHHhhCCCCCCeEEEECchHHHHHHhCCCCCCC----cEEEEecchhhheeecCCeecccCCCCceEEEEEecCCceEE
Confidence 45666565 4555677888888887654332 24555666655444433 1 1 1 111111100 00 00
Q ss_pred CccchhhHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHccCCceeEEEEeeccCCc-------------eeE
Q 006194 255 LGGEDFDHRVMDYFIKLIKKKYNKDISKDNKAIGKLRRECERAKRALSSQHQVRVEIESLFDGV-------------DFS 321 (657)
Q Consensus 255 lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~l~~~~-------------~~~ 321 (657)
+|+..---...+|+.+.+... .. . .+..|.+.++++..... .....+.+|.+.+.. .++
T Consensus 300 ~g~~~~~G~~~~W~~~~~~~~--~~--~---~~~~l~~~a~~~~~g~~-~~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~ 371 (511)
T 3hz6_A 300 VAPVLNAGNILQWALTLVGHR--PG--E---DCAEYFHMAAAEVQGVT-VPDGLLFVPYLHAERCPVELPAPRGALLGVT 371 (511)
T ss_dssp EEEESSSHHHHHHHGGGGTCC--TT--S---CSHHHHHHHHHHHTTCC-CCTTCEEEEESSCBCSSSCBSSCEEEEECCC
T ss_pred EeehhhHHHHHHHHHHHhccc--cc--c---cHHHHHHHHHhCCCCCC-CCCCEEEeCCCCCCCCCCCCCccceEEEcCC
Confidence 122222224566654443200 11 1 12345455555432210 022335556543221 122
Q ss_pred EEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCC-CCCCCchhhhHhHH
Q 006194 322 EPLTRARFEELNMDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEP-SKGINPDEAVAHGA 400 (657)
Q Consensus 322 ~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v-~~~~~~~~ava~GA 400 (657)
...+|.++ ++-+++.+.-.++..++.... .. ++.|.++||+++++.+.+.+.+.| +.+| ..+ .+.|+.|+||
T Consensus 372 ~~~~~~~l---~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~-~~~e~~alGa 444 (511)
T 3hz6_A 372 GATTRAQI---LLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNL-NVSLLVKP-DAHLHPLRGL 444 (511)
T ss_dssp TTCCHHHH---HHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHH-TCEEEECC-CGGGHHHHHH
T ss_pred CCCCHHHH---HHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHH-CCeeEEec-CCCCchHHHH
Confidence 23456555 445555555555555554433 34 789999999999999999999999 7887 654 6889999999
Q ss_pred HHHHhhhcCC
Q 006194 401 AVQGGILSGE 410 (657)
Q Consensus 401 a~~a~~~~~~ 410 (657)
|+.|+.-.+.
T Consensus 445 A~lA~~a~G~ 454 (511)
T 3hz6_A 445 AALAAVELEW 454 (511)
T ss_dssp HHHHHHHTTS
T ss_pred HHHHHHHhCC
Confidence 9999877664
No 41
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=98.41 E-value=5.8e-06 Score=90.07 Aligned_cols=203 Identities=17% Similarity=0.158 Sum_probs=108.4
Q ss_pred HHHHHcCC----ceeeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEEE---eCCeEEEEEE--eCCCC-Ccc
Q 006194 188 DAGIIAGL----NVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTI---DNGVFEVLAT--SGDTH-LGG 257 (657)
Q Consensus 188 ~Aa~~AGl----~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~~---~~~~~~v~~~--~~~~~-lGG 257 (657)
++++..|| +++.-..+..|+++..+..... .+++-+|.+++-..+..- ... +..... .+... .|+
T Consensus 226 ~~a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g----~~~~s~GTs~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~g~ 300 (508)
T 3ifr_A 226 EAAALTGLPTGLPVYGGAADHIASALAAGITRPG----DVLLKFGGAGDIIVASATAKSDPR-LYLDYHLVPGLYAPNGC 300 (508)
T ss_dssp HHHHHHCCCTTCEEECCEEHHHHHHHHTTCCSTT----EEEEEESSSEEEEECBSCCCCBTT-BBCCBCSSTTCBCCEEE
T ss_pred HHHHHhCCCCCCeEEEECchHHHHHHhCCCCCCC----cEEEEechhhhheeeCCCcccCCC-cceeeeecCCceEEech
Confidence 56666665 4555577888888887654322 345556655543332211 011 111111 01111 122
Q ss_pred chhhHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHccCCceeEEEEeeccCCc-------------eeEEEe
Q 006194 258 EDFDHRVMDYFIKLIKKKYNKDISKDNKAIGKLRRECERAKRALSSQHQVRVEIESLFDGV-------------DFSEPL 324 (657)
Q Consensus 258 ~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~l~~~~-------------~~~~~i 324 (657)
..---...+|+.+.|.. .+. + ..+..|.+.+++. .......+.+|.+.... .++..-
T Consensus 301 ~~~~G~~~~W~~~~~~~-~~~----~-~~~~~l~~~a~~~----~~~~~gl~flP~~~Ger~P~~d~~arg~~~Gl~~~~ 370 (508)
T 3ifr_A 301 MAATGSALNWLAKLLAP-EAG----E-AAHAQLDALAAEV----PAGADGLVCLPYFLGEKTPIHDPFASGTFTGLSLSH 370 (508)
T ss_dssp ESSSHHHHHHHHHHHST-TCT----T-HHHHHHHHHHHTS----CTTGGGCEEECCTTCCC----CCCCCCEEESCCTTC
T ss_pred hhhhHHHHHHHHHHHhh-cCC----C-CCHHHHHHHHhcC----CCCCCCeEEecCCCCCCCCCCCCCcCEEEECCCCCC
Confidence 22233456777666630 011 0 1234444444322 22233445566543221 112234
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHHH
Q 006194 325 TRARFEELNMDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQG 404 (657)
Q Consensus 325 tr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~a 404 (657)
+|.++-..+-+-+.-....+.+.|+..+. .++.|.++||+++++.+.+.+.+.| +.+|..+. ..|+.|+|||+.|
T Consensus 371 ~~~~l~rAvlEgia~~~~~~~~~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~-~~e~~alGaA~lA 445 (508)
T 3ifr_A 371 TRGHLWRALLEAVALAFRHHVAVLDDIGH---APQRFFASDGGTRSRVWMGIMADVL-QRPVQLLA-NPLGSAVGAAWVA 445 (508)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTC---CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEEE-CCSTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEeCCcccCHHHHHHHHHHh-CCeEEecC-CCCchHHHHHHHH
Confidence 66665443333332223333344555443 4789999999999999999999999 78887663 3568899999999
Q ss_pred hhhcCC
Q 006194 405 GILSGE 410 (657)
Q Consensus 405 ~~~~~~ 410 (657)
+.-.+.
T Consensus 446 ~~a~G~ 451 (508)
T 3ifr_A 446 AIGGGD 451 (508)
T ss_dssp HHHTCS
T ss_pred HHHhCC
Confidence 877664
No 42
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=98.33 E-value=8.9e-07 Score=96.77 Aligned_cols=195 Identities=16% Similarity=0.109 Sum_probs=102.2
Q ss_pred HcCCceeeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEE----E-eCCeEEEEEEe-CC----CCCccchhh
Q 006194 192 IAGLNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILT----I-DNGVFEVLATS-GD----THLGGEDFD 261 (657)
Q Consensus 192 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~----~-~~~~~~v~~~~-~~----~~lGG~~~d 261 (657)
..|.+++.-..+..|+++..+..... .+++-+|.+++-..... . ..+.+...... .+ ...|+...-
T Consensus 255 ~~g~pV~~g~~D~~aa~~g~g~~~~g----~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 330 (520)
T 4e1j_A 255 GAAIPILGVAGDQQAATIGQACFKPG----MLKSTYGTGCFALLNTGKDMVRSKNRLLTTIAYRLDGETTYALEGSIFVA 330 (520)
T ss_dssp TSCCBEEEECCHHHHHHHHTTCCSTT----CEEEEESSSEEEEEECTTCCCCCSSSCEEEEEEEETTEEEEEEEEEESCS
T ss_pred CCCCeEEEECCcHHHHHHhCCCCCCC----cEEEEecCchheEEecCCccccCCCceeeEEeEecCCCceEEEcchHhhH
Confidence 36888888888999999988754432 23444555443222210 0 01122111111 00 011222333
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHccCCceeEEEEeeccCC-------------ceeEEEecHHH
Q 006194 262 HRVMDYFIKLIKKKYNKDISKDNKAIGKLRRECERAKRALSSQHQVRVEIESLFDG-------------VDFSEPLTRAR 328 (657)
Q Consensus 262 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~l~~~-------------~~~~~~itr~~ 328 (657)
-...+|+.+.+ +.. . .+..|.+.+++. . .....+.+|.+... ..++..-+|.+
T Consensus 331 G~~~~W~~~~~----~~~--~---~~~~l~~~a~~~----~-~~~gl~~lP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~ 396 (520)
T 4e1j_A 331 GAAVQWLRDGL----KVI--K---AAPDTGSLAESA----D-PSQEVYLVPAFTGLGAPHWDPDARGAIFGMTRNTGPAE 396 (520)
T ss_dssp HHHHHHHHHTT----CCC----------CHHHHHTS----C-TTCCCEEECCTTCBCTTTCBTTCCCEEEEECTTCCHHH
T ss_pred HHHHHHHHHHc----CCc--c---cHHHHHHHHhcC----C-CCCcEEEEcCccCCCCCCCCCCCCEEEecccCCCCHHH
Confidence 33667765544 211 0 112222223221 1 23345566765432 11222346666
Q ss_pred HHHHHHHHHHHHHHH---HHHHHHHcCC-CCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHHH
Q 006194 329 FEELNMDLFKKTMGP---VKKALEDAGL-KKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQG 404 (657)
Q Consensus 329 fe~~~~~~~~~~~~~---i~~~l~~~~~-~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~a 404 (657)
+-. -+++.+.-. +.+.|+..+. .. .++.|.++||+++++.+.+.+.+.| +.+|..+ .+.|+.|+|||+.|
T Consensus 397 l~R---AvlEgia~~~r~~l~~l~~~~~~~g-~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~lA 470 (520)
T 4e1j_A 397 FAR---AALEAVCYQTRDLLEAMHKDWRRNG-NDTVLRVDGGMVASDWTMQRLSDLL-DAPVDRP-VILETTALGVAWLA 470 (520)
T ss_dssp HHH---HHHHHHHHHHHHHHHHHHHHCC------CCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCCCHHHHHHHHHH
T ss_pred HHH---HHHHHHHHHHHHHHHHHHHhhccCC-CcceEEEeCccccCHHHHHHHHHHh-CCeEEec-CCCccHHHHHHHHH
Confidence 544 333333333 3334444310 12 4788999999999999999999999 7888765 46779999999999
Q ss_pred hhhcCC
Q 006194 405 GILSGE 410 (657)
Q Consensus 405 ~~~~~~ 410 (657)
+.-.+.
T Consensus 471 ~~a~G~ 476 (520)
T 4e1j_A 471 GSRAGV 476 (520)
T ss_dssp HHHHTS
T ss_pred HHHcCC
Confidence 987765
No 43
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=98.31 E-value=7.5e-07 Score=97.62 Aligned_cols=83 Identities=19% Similarity=0.297 Sum_probs=58.3
Q ss_pred EecHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHH
Q 006194 323 PLTRARFEELNMDLFKKTMGPVKKALE-DAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAA 401 (657)
Q Consensus 323 ~itr~~fe~~~~~~~~~~~~~i~~~l~-~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa 401 (657)
..+|.++-..+-+-+.--...+.+.++ ..+. .++.|.++||+++++++.+.+.+.| +.+|.++ ...|+.|+|||
T Consensus 370 ~~~~~~i~RAvlEgia~~~r~~le~l~~~~g~---~~~~i~v~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~E~~alGAA 444 (526)
T 3ezw_A 370 GVNANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAA 444 (526)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEECchhhCHHHHHHHHHHH-CCEEEeC-CCCchHHHHHH
Confidence 456666554333222222223333333 3453 4789999999999999999999999 7888765 45689999999
Q ss_pred HHHhhhcCC
Q 006194 402 VQGGILSGE 410 (657)
Q Consensus 402 ~~a~~~~~~ 410 (657)
+.|+.-.|.
T Consensus 445 ~lA~~a~G~ 453 (526)
T 3ezw_A 445 YLAGLAVGF 453 (526)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHhCC
Confidence 999987765
No 44
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=98.26 E-value=6.2e-06 Score=89.89 Aligned_cols=83 Identities=20% Similarity=0.288 Sum_probs=57.6
Q ss_pred EecHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHH
Q 006194 323 PLTRARFEELNMDLFKKTMGPVKKALED-AGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAA 401 (657)
Q Consensus 323 ~itr~~fe~~~~~~~~~~~~~i~~~l~~-~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa 401 (657)
..+|.++-..+-+-+.-....+.+.|+. .+. .++.|.++||+++++.+.+.+.+.| +.+|..+ .+.|+.|+|||
T Consensus 371 ~~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA 445 (506)
T 3h3n_X 371 GTTKEDFVRATLQAVAYQSKDVIDTMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADIL-DIDVQRA-ANLETTALGAA 445 (506)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHH-TSEEEEC-SSSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEecccccCHHHHHHHHHHh-CCeEEec-CCCcchhHHHH
Confidence 3466665543332222222233334443 343 4789999999999999999999999 7887664 56789999999
Q ss_pred HHHhhhcCC
Q 006194 402 VQGGILSGE 410 (657)
Q Consensus 402 ~~a~~~~~~ 410 (657)
+.|+.-.+.
T Consensus 446 ~lA~~a~G~ 454 (506)
T 3h3n_X 446 YLAGLAVGF 454 (506)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHhCc
Confidence 999877664
No 45
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=98.09 E-value=7.5e-05 Score=74.01 Aligned_cols=47 Identities=21% Similarity=0.226 Sum_probs=41.1
Q ss_pred cceEEEecC-ccCcHHHHHHHHhhc--CCCCCCCCCCchhhhHhHHHHHH
Q 006194 358 IREIVLVGG-STRIPKIQQLLKDFF--DGKEPSKGINPDEAVAHGAAVQG 404 (657)
Q Consensus 358 i~~V~LvGG-~sr~p~v~~~l~~~f--~~~~v~~~~~~~~ava~GAa~~a 404 (657)
++.|+++|| .+..|.+++.+++.+ .+.++..+.+|..+.|+|||+.+
T Consensus 237 i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 237 TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIGALYLE 286 (287)
T ss_dssp CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHHHHHTC
T ss_pred CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHHHHHhC
Confidence 557999999 899999999999974 46778888899999999999974
No 46
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.73 E-value=5.1e-05 Score=82.35 Aligned_cols=121 Identities=16% Similarity=0.255 Sum_probs=87.2
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHH-HHcCCceeeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEEEeCCeEEE
Q 006194 168 KDAVVTVPAYFNDAQRQATKDAG-IIAGLNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTIDNGVFEV 246 (657)
Q Consensus 168 ~~~vitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v 246 (657)
..+++|.|..++...|+.+.+.+ +..|++.+.++.+|.+|++++|. ..+-+|+|+|+|+++++.+. .|.. +
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl-----~ttGLVVDiG~g~T~VvPV~--eG~v-l 293 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI-----STSTCVVNIGAAETRIACVD--EGTV-L 293 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC-----SSCEEEEEECSSCEEEEEEE--TTEE-C
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC-----CCceEEEcCCCceEEEEEEe--CCEE-E
Confidence 46999999999999999998876 56899999999999999998874 23469999999999999874 3321 1
Q ss_pred EEEeCCCCCccchhhHHHHHHHHHHHHhhcC---CCCCCCHHHHHHHHHHHHHHHHHccCC
Q 006194 247 LATSGDTHLGGEDFDHRVMDYFIKLIKKKYN---KDISKDNKAIGKLRRECERAKRALSSQ 304 (657)
Q Consensus 247 ~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~---~~~~~~~~~~~~L~~~~e~~K~~Ls~~ 304 (657)
........+||+++|..|.++|..+ .+. ..+.. . .=...++.+|+.++..
T Consensus 294 ~~ai~rL~iGG~dLT~yL~kLL~~r---gypy~~~~f~t--~---~e~eiVrdIKEk~CyV 346 (655)
T 4am6_A 294 EHSAITLDYGGDDITRLFALFLLQS---DFPLQDWKIDS--K---HGWLLAERLKKNFTTF 346 (655)
T ss_dssp GGGCEEESCCHHHHHHHHHHHHHHT---TCSCCSCCTTS--H---HHHHHHHHHHHHHCCC
T ss_pred hhheeeecchHHHHHHHHHHHHHHc---CCCccccCCCC--c---chHHHHHHHHHheEEE
Confidence 1111225899999999999886543 111 11111 1 1125678888888765
No 47
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=97.10 E-value=0.039 Score=55.85 Aligned_cols=44 Identities=27% Similarity=0.337 Sum_probs=29.6
Q ss_pred HcCCceeeecchhHHHHHHhccccCC-CcceEEEEEecCCeeEEEEE
Q 006194 192 IAGLNVARIINEPTAAAIAYGLDKKG-GEMNILVYDLGGGTFDVSIL 237 (657)
Q Consensus 192 ~AGl~~~~li~Ep~Aaal~y~~~~~~-~~~~vlv~D~Gggt~dvsv~ 237 (657)
..|++ +.+.|+..|+|++-...... ..++++++-+|.| +-.+++
T Consensus 95 ~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii 139 (321)
T 3vgl_A 95 RVGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGII 139 (321)
T ss_dssp HHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred hhCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEE
Confidence 34776 67999999999875443222 3467888888888 444444
No 48
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=97.05 E-value=0.02 Score=57.68 Aligned_cols=75 Identities=19% Similarity=0.336 Sum_probs=44.1
Q ss_pred HHHHHHHHHHcCCceeeecchhHHHHHHh-ccccCC--CcceEEEEEecCCeeEEEEEEEeCCeEEEEEEeCCCCCccch
Q 006194 183 RQATKDAGIIAGLNVARIINEPTAAAIAY-GLDKKG--GEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGED 259 (657)
Q Consensus 183 r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~--~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~ 259 (657)
...+..+-+..|+++ .+|+-.+-|.+.| +..... .....+|+|+|||+|.+++++ ++.+ .. ....++|.-.
T Consensus 92 ~~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~--~~~~--~~-~~Sl~lG~vr 165 (315)
T 3mdq_A 92 QVLIDRIKKEVNIDV-EVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGN--KNEI--LW-KQSFEIGGQR 165 (315)
T ss_dssp HHHHHHHHHHHCCCE-EECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEEC--SSCE--EE-EEEESCCHHH
T ss_pred HHHHHHHHHHHCCCe-EEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEE--CCeE--ee-eEEEechhhH
Confidence 344455556689986 5555444444333 332211 245789999999999999986 2222 11 2235677776
Q ss_pred hhHH
Q 006194 260 FDHR 263 (657)
Q Consensus 260 ~d~~ 263 (657)
+.+.
T Consensus 166 l~e~ 169 (315)
T 3mdq_A 166 LIDR 169 (315)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 49
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=97.04 E-value=0.0022 Score=64.76 Aligned_cols=77 Identities=16% Similarity=0.066 Sum_probs=47.9
Q ss_pred HHHHHHHHHHcCCceeeecchhHHHHHHhccccCC-CcceEEEEEecCCeeEEEEEEEeCCeEEEEEEeCCCCCccchhh
Q 006194 183 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFD 261 (657)
Q Consensus 183 r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~-~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d 261 (657)
...+..+-+..|+++--+-.|.+|...+.+..... .....+|+|+|||+|.+++++ ++.+ . .....++|+..+.
T Consensus 100 ~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~--~~~~--~-~~~Sl~~G~v~l~ 174 (315)
T 1t6c_A 100 EEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGK--GYKV--R-EVISLPIGIVNLT 174 (315)
T ss_dssp HHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEE--TTEE--E-EEEEECCCHHHHH
T ss_pred HHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEe--CCce--e-eEEEEeccHHHHH
Confidence 34444455578998654555555544443432221 245799999999999999975 4433 1 1233689998876
Q ss_pred HHH
Q 006194 262 HRV 264 (657)
Q Consensus 262 ~~l 264 (657)
+.+
T Consensus 175 e~~ 177 (315)
T 1t6c_A 175 ETF 177 (315)
T ss_dssp HHH
T ss_pred HHh
Confidence 664
No 50
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=97.00 E-value=0.26 Score=50.23 Aligned_cols=61 Identities=7% Similarity=-0.074 Sum_probs=40.7
Q ss_pred CCCcEEEEeCCCCCHHHHHHHHHHHHH-cC--CceeeecchhHHHHHHhccccCCCcceEEEEEecCCee
Q 006194 166 KIKDAVVTVPAYFNDAQRQATKDAGII-AG--LNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTF 232 (657)
Q Consensus 166 ~~~~~vitVPa~~~~~qr~~l~~Aa~~-AG--l~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~ 232 (657)
.+..+.|++|...+......+.+..+. .| ...+.+.|+..|+|+++ . ..+.+++-+|.|.-
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~-----~~~~v~v~~GTGig 133 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-T-----PDGGVVLISGTGSN 133 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-C-----SSCEEEEEESSSEE
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-C-----CCCcEEEEEcCCce
Confidence 567899999998887655566555543 34 13467899999999984 2 13455556676643
No 51
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=96.93 E-value=0.3 Score=48.62 Aligned_cols=49 Identities=12% Similarity=0.179 Sum_probs=37.4
Q ss_pred CcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHHHhh
Q 006194 357 DIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQGGI 406 (657)
Q Consensus 357 ~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~a~~ 406 (657)
+++.|+|.||.+..+.+.+.+++.+...++..+. .+.+.+.||+..+..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 4578999999887788888888887444555554 567889999988754
No 52
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.91 E-value=0.00099 Score=73.27 Aligned_cols=88 Identities=17% Similarity=0.161 Sum_probs=65.9
Q ss_pred EEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHH
Q 006194 321 SEPLTRARFEELNMDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGA 400 (657)
Q Consensus 321 ~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GA 400 (657)
+..-+|.++-.+++-+++.+.-.++..++........++.|.++||+++++.+.+.+.+.| +.+|..+ ...++.|+||
T Consensus 406 ~~~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGA 483 (554)
T 3l0q_A 406 KLSTTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANAT-GCAMLLP-EESEAMLLGS 483 (554)
T ss_dssp CSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHH-CCEEEEE-SCSCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhh-CCeEEec-CCCcchHHHH
Confidence 3446888885556666666665555555443222345889999999999999999999999 7887765 4568999999
Q ss_pred HHHHhhhcCC
Q 006194 401 AVQGGILSGE 410 (657)
Q Consensus 401 a~~a~~~~~~ 410 (657)
|+.|+.-.+.
T Consensus 484 A~lA~~a~G~ 493 (554)
T 3l0q_A 484 AMMGTVAAGV 493 (554)
T ss_dssp HHHHHHHTTS
T ss_pred HHHHHHHcCC
Confidence 9999876664
No 53
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=96.85 E-value=0.18 Score=51.10 Aligned_cols=65 Identities=15% Similarity=0.134 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcC--CCCCCCCC---CchhhhHhHHHHHHhhh
Q 006194 338 KKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFD--GKEPSKGI---NPDEAVAHGAAVQGGIL 407 (657)
Q Consensus 338 ~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~--~~~v~~~~---~~~~ava~GAa~~a~~~ 407 (657)
+.+.+.+.++.+..+ ++.|+|+||.+....+++.|.+.+. +.++..+. -.|.+++.|+|.+....
T Consensus 230 ~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~ 299 (330)
T 2ivn_A 230 AALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYK 299 (330)
T ss_dssp HHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHHh
Confidence 333444445544433 5689999999999999999998762 23444443 33678899988765443
No 54
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=96.78 E-value=0.008 Score=61.13 Aligned_cols=70 Identities=16% Similarity=0.028 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHHHHH----HHcCCCCCCcceEEEecC-ccCcHHHHHHHHhhc-----CCCCCCCCCCchhhhHhH
Q 006194 330 EELNMDLFKKTMGPVKKAL----EDAGLKKTDIREIVLVGG-STRIPKIQQLLKDFF-----DGKEPSKGINPDEAVAHG 399 (657)
Q Consensus 330 e~~~~~~~~~~~~~i~~~l----~~~~~~~~~i~~V~LvGG-~sr~p~v~~~l~~~f-----~~~~v~~~~~~~~ava~G 399 (657)
++++..++..+...|-... +..+ ++.|+++|| .+..|.+++.|++.+ ++.++..+.+|..+-|+|
T Consensus 279 eDIa~gll~sVa~~I~~lA~l~A~~~~-----i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlG 353 (360)
T 2i7n_A 279 EDLARATLVTITNNIGSIARMCALNEN-----IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVG 353 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-----CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHH
Confidence 5556666655555554442 3333 446999999 899999999999987 246777788999999999
Q ss_pred HHHHH
Q 006194 400 AAVQG 404 (657)
Q Consensus 400 Aa~~a 404 (657)
||+.+
T Consensus 354 AaL~~ 358 (360)
T 2i7n_A 354 ALLEL 358 (360)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99975
No 55
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=96.78 E-value=0.0022 Score=70.12 Aligned_cols=78 Identities=17% Similarity=0.145 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHHHhhhcC
Q 006194 330 EELNMDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQGGILSG 409 (657)
Q Consensus 330 e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~a~~~~~ 409 (657)
.++++-+++.+.-.++..++..+.....++.|.++||+++++++.+.+.+.| +.+|..+ .+.|+.|+|||+.|+.-.+
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVF-DAPVYVI-DTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHH-TSCEEEC-CCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHh-CCceEec-CCCCchHHHHHHHHHHHhC
Confidence 4556666666666666777766555556789999999999999999999999 7887765 5678999999999986554
No 56
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=96.77 E-value=0.11 Score=51.97 Aligned_cols=38 Identities=26% Similarity=0.238 Sum_probs=26.5
Q ss_pred HcCCceeeecchhHHHHHHhccccCC-CcceEEEEEecCC
Q 006194 192 IAGLNVARIINEPTAAAIAYGLDKKG-GEMNILVYDLGGG 230 (657)
Q Consensus 192 ~AGl~~~~li~Ep~Aaal~y~~~~~~-~~~~vlv~D~Ggg 230 (657)
..|++ +.+.|+..|+|++-...... ..++++++-+|.|
T Consensus 97 ~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG 135 (302)
T 3vov_A 97 ATGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTG 135 (302)
T ss_dssp HHSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS
T ss_pred hhCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCc
Confidence 35776 57899999999876443222 3456888888877
No 57
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=96.70 E-value=0.053 Score=55.02 Aligned_cols=48 Identities=21% Similarity=0.169 Sum_probs=32.7
Q ss_pred CcceEEEecCccCcHHHHHHHHhhcCCC--------CCCCCCCchhhhHhHHHHHH
Q 006194 357 DIREIVLVGGSTRIPKIQQLLKDFFDGK--------EPSKGINPDEAVAHGAAVQG 404 (657)
Q Consensus 357 ~i~~V~LvGG~sr~p~v~~~l~~~f~~~--------~v~~~~~~~~ava~GAa~~a 404 (657)
+++.|+|-||.+..+.+.+.+++.+... ++....-.+.+.++|||..+
T Consensus 269 ~p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 269 DPHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CCSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 3578999999988877777777766221 11222234678999999865
No 58
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=96.64 E-value=0.056 Score=54.68 Aligned_cols=70 Identities=19% Similarity=0.064 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCc-HHHHHHHHhhcC---------CCCCCCCCCchhhhHhHHHHHH
Q 006194 335 DLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRI-PKIQQLLKDFFD---------GKEPSKGINPDEAVAHGAAVQG 404 (657)
Q Consensus 335 ~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~-p~v~~~l~~~f~---------~~~v~~~~~~~~ava~GAa~~a 404 (657)
.++++....+-..+...-. .-+++.|+|.||.++. +.+.+.|++.+. ..++....-.+.+.++|||.++
T Consensus 239 ~~~~~~~~~La~~i~~l~~-~ldP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~ 317 (321)
T 3r8e_A 239 AVWADIGTIIGESLVNIVR-VMDLNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLI 317 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHCCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH-HHCCCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHH
Confidence 3444444444444332110 1235789999999886 666666655441 1234444456789999999887
Q ss_pred h
Q 006194 405 G 405 (657)
Q Consensus 405 ~ 405 (657)
.
T Consensus 318 ~ 318 (321)
T 3r8e_A 318 M 318 (321)
T ss_dssp H
T ss_pred H
Confidence 3
No 59
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=96.61 E-value=0.003 Score=68.39 Aligned_cols=81 Identities=17% Similarity=0.203 Sum_probs=60.5
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHH
Q 006194 324 LTRARFEELNMDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQ 403 (657)
Q Consensus 324 itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~ 403 (657)
.+|.++ ++-+++.+.-.+...++...... .++.|.++||+++++.+.+.+.+.+ +.++..+ .+.++.|+|||+.
T Consensus 364 ~~~~~l---~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~l 437 (497)
T 2zf5_O 364 TGREHL---ARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADIL-NRKVIRP-VVKETTALGAAYL 437 (497)
T ss_dssp CCHHHH---HHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHH
T ss_pred CCHHHH---HHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhc-CCeEEEc-CCCcchHHHHHHH
Confidence 355444 45555666666666666554333 6789999999999999999999999 7888765 4566999999999
Q ss_pred HhhhcCC
Q 006194 404 GGILSGE 410 (657)
Q Consensus 404 a~~~~~~ 410 (657)
|+.-.+.
T Consensus 438 A~~~~g~ 444 (497)
T 2zf5_O 438 AGLAVDY 444 (497)
T ss_dssp HHHHTTS
T ss_pred HHHHhCc
Confidence 9876654
No 60
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.61 E-value=0.0026 Score=68.70 Aligned_cols=83 Identities=17% Similarity=0.174 Sum_probs=58.2
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHH
Q 006194 324 LTRARFEELNMDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQ 403 (657)
Q Consensus 324 itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~ 403 (657)
.++.++ ++-+++.+.-.++..++........++.|.++||+++++.+.+.+.+.+ +.++..+...+.+.|+|||+.
T Consensus 356 ~~~~~~---~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~~~e~~~alGAA~l 431 (484)
T 2itm_A 356 HGPNEL---ARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPALGAARL 431 (484)
T ss_dssp CCHHHH---HHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHH-CCCEEEESCTTSCHHHHHHHH
T ss_pred CCHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHHHHHHHh-CCeEEeCCCCCcccHHHHHHH
Confidence 456554 4444455544444444433222345788999999999999999999999 788877654444589999999
Q ss_pred HhhhcCC
Q 006194 404 GGILSGE 410 (657)
Q Consensus 404 a~~~~~~ 410 (657)
|+.-.+.
T Consensus 432 A~~~~g~ 438 (484)
T 2itm_A 432 AQIAANP 438 (484)
T ss_dssp HHHHHCT
T ss_pred HHHHcCC
Confidence 9876654
No 61
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=96.59 E-value=0.0022 Score=69.60 Aligned_cols=78 Identities=24% Similarity=0.391 Sum_probs=56.8
Q ss_pred cHHHHHHHHHHHHHHHHHH---HHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHH
Q 006194 325 TRARFEELNMDLFKKTMGP---VKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAA 401 (657)
Q Consensus 325 tr~~fe~~~~~~~~~~~~~---i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa 401 (657)
+|.++-. -+++.+.-. +.+.|++.+ ..++.|.++||+++++.+.+.+.+.| +.+|..+ .+.++.|+|||
T Consensus 395 ~~~~l~R---AvlEgia~~~r~~l~~l~~~g---~~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA 466 (515)
T 3i8b_A 395 TRENLAR---AFVEGLLCSQRDCLELIRSLG---ASITRILLIGGGAKSEAIRTLAPSIL-GMDVTRP-ATDEYVAIGAA 466 (515)
T ss_dssp SHHHHHH---HHHHHHHHHHHHHHHHHHHTT---CCCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-CCCCHHHHHHH
T ss_pred CHHHHHH---HHHHHHHHHHHHHHHHHHHcC---CCCCEEEEECchhcCHHHHHHHHHHh-CCceEec-CCcccHHHHHH
Confidence 5665543 344444333 334455544 34789999999999999999999999 7887765 46679999999
Q ss_pred HHHhhhcCC
Q 006194 402 VQGGILSGE 410 (657)
Q Consensus 402 ~~a~~~~~~ 410 (657)
+.|+.-.+.
T Consensus 467 ~lA~~a~G~ 475 (515)
T 3i8b_A 467 RQAAWVLSG 475 (515)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHcCC
Confidence 999876654
No 62
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=96.42 E-value=0.0032 Score=69.40 Aligned_cols=81 Identities=16% Similarity=0.212 Sum_probs=58.3
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCcc-CcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHH
Q 006194 324 LTRARFEELNMDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGST-RIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAV 402 (657)
Q Consensus 324 itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s-r~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~ 402 (657)
-+|.+|- +-+++.+.-.++..++........++.|.++||++ +++.+.+.+.+.| +.+|..+ .+.|+.|+|||+
T Consensus 409 ~t~~~l~---RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~ks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~ 483 (572)
T 3jvp_A 409 TKPEEIY---RALLEATAFGTRAIVDAFHGRGVEVHELYACGGLPQKNHLLMQIFADVT-NREIKVA-ASKQTPALGAAM 483 (572)
T ss_dssp CCHHHHH---HHHHHHHHHHHHHHHHHHHTTTCCEEEEEEESSHHHHCHHHHHHHHHHH-TSCEEEB-CCSSHHHHHHHH
T ss_pred CCHHHHH---HHHHHHHHHHHHHHHHHHHHcCCCcCEEEEEcCchhhCHHHHHHHHHHH-CCeeEec-CCCccHHHHHHH
Confidence 4666654 44444444444443333221234578999999999 9999999999999 7887665 467899999999
Q ss_pred HHhhhcC
Q 006194 403 QGGILSG 409 (657)
Q Consensus 403 ~a~~~~~ 409 (657)
.|+.-.+
T Consensus 484 lA~~a~G 490 (572)
T 3jvp_A 484 FASVAAG 490 (572)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9987766
No 63
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=96.41 E-value=0.0031 Score=68.37 Aligned_cols=79 Identities=20% Similarity=0.313 Sum_probs=57.0
Q ss_pred ecHHHHHHHHHHHHHHHHHHHH---HHHHH-cCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhH
Q 006194 324 LTRARFEELNMDLFKKTMGPVK---KALED-AGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHG 399 (657)
Q Consensus 324 itr~~fe~~~~~~~~~~~~~i~---~~l~~-~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~G 399 (657)
.+|.++-. -+++.+.-.+. +.|++ .+ ..++.|.++||+++++.+.+.+.+.| +.+|..+ .+.++.|+|
T Consensus 373 ~~~~~l~R---AvlEgia~~~~~~~~~l~~~~g---~~~~~i~~~GG~aks~~~~Qi~Adv~-g~pV~~~-~~~e~~alG 444 (501)
T 3g25_A 373 TEKEHFIR---ATLESLCYQTRDVMEAMSKDSG---IDVQSLRVDGGAVKNNFIMQFQADIV-NTSVERP-EIQETTALG 444 (501)
T ss_dssp CCHHHHHH---HHHHHHHHHHHHHHHHHHHHSS---CCCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHH
T ss_pred CCHHHHHH---HHHHHHHHHHHHHHHHHHHhcC---CCCcEEEEecchhcCHHHHHHHHHHh-CCceEec-CCCcchHHH
Confidence 45666544 34444433333 33433 34 34789999999999999999999999 7877654 567899999
Q ss_pred HHHHHhhhcCC
Q 006194 400 AAVQGGILSGE 410 (657)
Q Consensus 400 Aa~~a~~~~~~ 410 (657)
||+.|+.-.+.
T Consensus 445 aA~la~~a~G~ 455 (501)
T 3g25_A 445 AAFLAGLAVGF 455 (501)
T ss_dssp HHHHHHHHTTS
T ss_pred HHHHHHHHhCc
Confidence 99999887665
No 64
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=96.38 E-value=0.11 Score=52.57 Aligned_cols=49 Identities=18% Similarity=0.150 Sum_probs=32.8
Q ss_pred cceEEEecCccC-cHHHHHHHHhhcCC---------CCCCCCCCchhhhHhHHHHHHhh
Q 006194 358 IREIVLVGGSTR-IPKIQQLLKDFFDG---------KEPSKGINPDEAVAHGAAVQGGI 406 (657)
Q Consensus 358 i~~V~LvGG~sr-~p~v~~~l~~~f~~---------~~v~~~~~~~~ava~GAa~~a~~ 406 (657)
++.|+|.||.+. .+.+.+.+++.+.. .++....-.+.+.++|||..+..
T Consensus 263 p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~~ 321 (326)
T 2qm1_A 263 PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQ 321 (326)
T ss_dssp CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGGG
T ss_pred CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHHH
Confidence 468999999886 57777777665521 12222334567899999988754
No 65
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=96.25 E-value=0.0034 Score=68.19 Aligned_cols=79 Identities=18% Similarity=0.292 Sum_probs=56.7
Q ss_pred ecHHHHHHHHHHHHHHHHHHHH---HHHHH-cCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhH
Q 006194 324 LTRARFEELNMDLFKKTMGPVK---KALED-AGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHG 399 (657)
Q Consensus 324 itr~~fe~~~~~~~~~~~~~i~---~~l~~-~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~G 399 (657)
.+|.++-. -+++.+.-.++ +.|+. .+. .++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.|+.|+|
T Consensus 370 ~~~~~l~R---AvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alG 441 (510)
T 2p3r_A 370 VNANHIIR---ATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALG 441 (510)
T ss_dssp CCHHHHHH---HHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHH
T ss_pred CCHHHHHH---HHHHHHHHHHHHHHHHHHHhcCC---CccEEEEeCchhcCHHHHHHHHHHh-CCceEec-CCCCcHHHH
Confidence 45666544 33444333333 33433 243 4789999999999999999999999 7887664 467799999
Q ss_pred HHHHHhhhcCC
Q 006194 400 AAVQGGILSGE 410 (657)
Q Consensus 400 Aa~~a~~~~~~ 410 (657)
||+.|+.-.+.
T Consensus 442 aA~lA~~a~G~ 452 (510)
T 2p3r_A 442 AAYLAGLAVGF 452 (510)
T ss_dssp HHHHHHHHHTS
T ss_pred HHHHHHHHhCc
Confidence 99999887665
No 66
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=96.22 E-value=0.15 Score=50.60 Aligned_cols=37 Identities=16% Similarity=0.126 Sum_probs=26.3
Q ss_pred HcCCceeeecchhHHHHHHhccccCCCcceEEEEEecCC
Q 006194 192 IAGLNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGG 230 (657)
Q Consensus 192 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Ggg 230 (657)
..|++ +.+.|+..|+|++... .....++++++-+|.|
T Consensus 93 ~~~~p-v~v~NDa~aaa~~e~~-~~~~~~~~v~l~~GtG 129 (292)
T 2gup_A 93 SYQLP-VHLENDANCVGLSELL-AHPELENAACVVIGTG 129 (292)
T ss_dssp GGCCC-EEEEEHHHHHHHHHHH-HCTTCSSEEEEEESSS
T ss_pred HcCCC-EEEechHHHHHHHHHH-hcCCCCeEEEEEECCc
Confidence 45776 6789999999987644 2223456888888887
No 67
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=96.22 E-value=0.0073 Score=65.35 Aligned_cols=82 Identities=17% Similarity=0.208 Sum_probs=57.9
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHH
Q 006194 324 LTRARFEELNMDLFKKTMGPVKKALEDAG-LKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAV 402 (657)
Q Consensus 324 itr~~fe~~~~~~~~~~~~~i~~~l~~~~-~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~ 402 (657)
.+|.++ ++-+++.+.-.+...++... .....++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.++.|+|||+
T Consensus 367 ~~~~~~---~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~n~~~~q~~Adv~-g~pV~~~-~~~e~~alGaA~ 441 (495)
T 2dpn_A 367 TSRAHL---ARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLKIQADLL-GVPVAVP-EVTETTALGAAL 441 (495)
T ss_dssp CCHHHH---HHHHHHHHHHHHHHHHHHHHTTTSCCCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHH
T ss_pred CCHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccccCHHHHHHHHHHh-CCeeEec-CCcccHHHHHHH
Confidence 355554 44445555544444444331 12335688999999999999999999999 7887765 456799999999
Q ss_pred HHhhhcCC
Q 006194 403 QGGILSGE 410 (657)
Q Consensus 403 ~a~~~~~~ 410 (657)
.|+.-.+.
T Consensus 442 la~~a~G~ 449 (495)
T 2dpn_A 442 MAGVGAGA 449 (495)
T ss_dssp HHHHHHTS
T ss_pred HHHhhcCc
Confidence 99876653
No 68
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=96.17 E-value=0.19 Score=50.14 Aligned_cols=50 Identities=22% Similarity=0.155 Sum_probs=35.4
Q ss_pred CcceEEEecCccCcHHHHHHHHhhcCCC-----CCCCCCCchhhhHhHHHHHHhh
Q 006194 357 DIREIVLVGGSTRIPKIQQLLKDFFDGK-----EPSKGINPDEAVAHGAAVQGGI 406 (657)
Q Consensus 357 ~i~~V~LvGG~sr~p~v~~~l~~~f~~~-----~v~~~~~~~~ava~GAa~~a~~ 406 (657)
+++.|+|.||.+..+.+.+.|++.+... ++....-.+.+.++||+.++..
T Consensus 237 ~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 237 DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 3578999999998887888888777321 1222334567999999988754
No 69
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=96.08 E-value=0.0055 Score=66.45 Aligned_cols=52 Identities=29% Similarity=0.360 Sum_probs=45.1
Q ss_pred CcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHHHhhhcCC
Q 006194 357 DIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQGGILSGE 410 (657)
Q Consensus 357 ~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~a~~~~~~ 410 (657)
.++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.++.|+|||+.|+.-.+.
T Consensus 403 ~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~lA~~~~G~ 454 (504)
T 2d4w_A 403 DLTELRVDGGMVANELLMQFQADQL-GVDVVRP-KVAETTALGAAYAAGIAVGF 454 (504)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHHTS
T ss_pred CcceEEEeCCcccCHHHHHHHHHHh-CCeEEeC-CCCcchHHHHHHHHHhhcCc
Confidence 4688999999999999999999999 7888765 55779999999999876654
No 70
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=95.88 E-value=0.0071 Score=65.59 Aligned_cols=52 Identities=21% Similarity=0.235 Sum_probs=44.4
Q ss_pred Cc-ceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHHHhhhcCC
Q 006194 357 DI-REIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQGGILSGE 410 (657)
Q Consensus 357 ~i-~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~a~~~~~~ 410 (657)
.+ +.|.++||+++++.+.+.+.+.+ +.+|... .+.++.|+|||+.|+.-.+.
T Consensus 406 ~~~~~i~~~GG~a~s~~~~Q~~Adv~-g~pV~~~-~~~e~~alGaA~la~~~~G~ 458 (503)
T 2w40_A 406 EMLHVLRCDGGMTKNKPFMQFNSDII-NTKIEVS-KYKEVTSLGAAVLAGLEVKI 458 (503)
T ss_dssp SCCSCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTTC
T ss_pred CccceEEEeCccccCHHHHHHHHHHH-CCeEEec-CCCcchHHHHHHHHHHHhCc
Confidence 35 78999999999999999999999 7887655 45679999999999876654
No 71
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=95.56 E-value=0.38 Score=52.37 Aligned_cols=183 Identities=17% Similarity=0.174 Sum_probs=90.4
Q ss_pred CCCcEEEEe-CCCCCHHHHHHH--HHHHHHcCCceeeecchhHHHHHHhccccCC-CcceEEEEEecCCeeEEEEEEEeC
Q 006194 166 KIKDAVVTV-PAYFNDAQRQAT--KDAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEMNILVYDLGGGTFDVSILTIDN 241 (657)
Q Consensus 166 ~~~~~vitV-Pa~~~~~qr~~l--~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~-~~~~vlv~D~Gggt~dvsv~~~~~ 241 (657)
.+..+++|. |..|+.-..... +--|...|.+.+. ++.-.|-+++....... .+ +++-+-||++.+..+ ..
T Consensus 72 ~id~ia~~~gPG~~~~l~vg~~~ak~la~~~~~p~~~-v~h~~aH~~~~~~~~~~~~p---~~l~vsGg~t~~~~~--~~ 145 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIG-VNHCIAHIEIGKLTTEAEDP---LTLYVSGGNTQVIAY--VS 145 (540)
T ss_dssp GCCEEEEEEESSCHHHHHHHHHHHHHHHHHHTCCEEE-EEHHHHHHHHHHHHSSCSSC---EEEEECSSCEEEEEE--ET
T ss_pred HCcEEEEecCCCchhhHHHHHHHHHHHHHHhCCCeeE-eccHHHHHHHHHHhcCCCCC---cEEEEcCCCcEEEEE--eC
Confidence 456666765 887765432211 1123344666544 44444444332222221 23 555566777766544 46
Q ss_pred CeEEEEEEeCCCCCccchhhHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHccCCceeEEEEeeccCCceeE
Q 006194 242 GVFEVLATSGDTHLGGEDFDHRVMDYFIKLIKKKYNKDISKDNKAIGKLRRECERAKRALSSQHQVRVEIESLFDGVDFS 321 (657)
Q Consensus 242 ~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~l~~~~~~~ 321 (657)
+.+++++...|. --|+.||.. .+..|......+ .+.+| |.+.+ . .+.++....+.+++
T Consensus 146 ~~~~~lg~t~d~-s~G~~~D~~---------a~~lgl~~~gg~-~ie~l---A~~g~------~--~~~~p~~~~~~~~s 203 (540)
T 3en9_A 146 KKYRVFGETLDI-AVGNCLDQF---------ARYVNLPHPGGP-YIEEL---ARKGK------K--LVDLPYTVKGMDIA 203 (540)
T ss_dssp TEEEEEEEBSSS-CHHHHHHHH---------HHHTTCCSSCHH-HHHHH---HHTCC------C--CCCCCCCEETTEEC
T ss_pred CceEEEeeccch-HhHHHHHHH---------HHHcCCCCCCHH-HHHHH---HHcCC------c--cCcCCCCCCCccee
Confidence 888888876643 345666543 222344333222 22222 22211 0 01111111122222
Q ss_pred EE-------------ecHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhc
Q 006194 322 EP-------------LTRARFEELNM-DLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFF 381 (657)
Q Consensus 322 ~~-------------itr~~fe~~~~-~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f 381 (657)
+. .+.+++-..++ -+++-+.+.+.++++..+ ++.|+|+||-+....+++.+.+.+
T Consensus 204 fsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~ 272 (540)
T 3en9_A 204 FSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMC 272 (540)
T ss_dssp CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHH
Confidence 11 01122221111 233444455666666654 468999999999999999999876
No 72
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=95.52 E-value=0.012 Score=63.43 Aligned_cols=80 Identities=23% Similarity=0.218 Sum_probs=53.3
Q ss_pred EEecHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHH
Q 006194 322 EPLTRARFEELNMDLFKKTMGPVKKALED-AGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGA 400 (657)
Q Consensus 322 ~~itr~~fe~~~~~~~~~~~~~i~~~l~~-~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GA 400 (657)
...+|.++-..+-+-+.--...+.+.|+. .+. .++.|.++||+++++++.+.+.+.| +.+|.... .++.|+||
T Consensus 360 ~~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~~--~e~~alGa 433 (489)
T 2uyt_A 360 IPESDAELARCIFDSLALLYADVLHELAQLRGE---DFSQLHIVGGGCQNTLLNQLCADAC-GIRVIAGP--VEASTLGN 433 (489)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEECC--TTHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEeCChhhhHHHHHHHHHHH-CCeeecCC--ccHhHHHH
Confidence 44567666543333222222333334443 343 4688999999999999999999999 78876543 68999999
Q ss_pred HHHHhhh
Q 006194 401 AVQGGIL 407 (657)
Q Consensus 401 a~~a~~~ 407 (657)
|+.|..-
T Consensus 434 a~~A~~a 440 (489)
T 2uyt_A 434 IGIQLMT 440 (489)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666543
No 73
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=95.26 E-value=2.6 Score=42.50 Aligned_cols=69 Identities=19% Similarity=0.216 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcC--CCCCCCCC---CchhhhHhHHHHHHhhhcC
Q 006194 336 LFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFD--GKEPSKGI---NPDEAVAHGAAVQGGILSG 409 (657)
Q Consensus 336 ~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~--~~~v~~~~---~~~~ava~GAa~~a~~~~~ 409 (657)
+.+.+.+.+.++++..+ ++.|+|+||.+....+++.|.+.+. +.++..+. -.|.+++.|+|.+.....+
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 33444555566666554 4789999999999999999998763 22333332 3578999999876655444
No 74
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=95.11 E-value=0.65 Score=46.80 Aligned_cols=37 Identities=19% Similarity=0.170 Sum_probs=25.8
Q ss_pred cCCceeeecchhHHHHHHhccccCC-CcceEEEEEecCC
Q 006194 193 AGLNVARIINEPTAAAIAYGLDKKG-GEMNILVYDLGGG 230 (657)
Q Consensus 193 AGl~~~~li~Ep~Aaal~y~~~~~~-~~~~vlv~D~Ggg 230 (657)
.|++ +.+.|+..|+|++-...... ...+++++-+|.|
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG 157 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG 157 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc
Confidence 4766 68999999999875433221 2457888888887
No 75
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=94.94 E-value=1.4 Score=45.32 Aligned_cols=42 Identities=17% Similarity=0.182 Sum_probs=28.2
Q ss_pred cCCceeeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEE
Q 006194 193 AGLNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSIL 237 (657)
Q Consensus 193 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~ 237 (657)
.|++ +.+.|+..|+|++-....... .+++++-+|.|- -.+++
T Consensus 188 ~~~p-V~v~NDanaaalaE~~~g~~~-~~~v~l~~GtGi-G~giv 229 (380)
T 2hoe_A 188 YGIE-VWVENDADMGAVGEKWYTKRD-DSFAWILTGKGI-GAGII 229 (380)
T ss_dssp HCSE-EEEEEHHHHHHHHHHHHTTCC-SCEEEEEESSSC-EEEEE
T ss_pred hCCC-EEEechHHHHHHHHHHhCCCC-CcEEEEEeCCce-EEEEE
Confidence 4775 678999999998754332222 678888888873 34444
No 76
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=94.86 E-value=0.59 Score=48.76 Aligned_cols=43 Identities=14% Similarity=0.217 Sum_probs=28.4
Q ss_pred cCCceeeecchhHHHHHHhccccCC-CcceEEEEEecCCeeEEEEE
Q 006194 193 AGLNVARIINEPTAAAIAYGLDKKG-GEMNILVYDLGGGTFDVSIL 237 (657)
Q Consensus 193 AGl~~~~li~Ep~Aaal~y~~~~~~-~~~~vlv~D~Gggt~dvsv~ 237 (657)
.|++ +.+.|+..|+|++-...... ...+++++-+|.| +-.+++
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGASRGARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCc-EEEEEE
Confidence 4776 57899999999875433221 3456888888887 334444
No 77
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=94.74 E-value=0.072 Score=57.46 Aligned_cols=74 Identities=18% Similarity=0.227 Sum_probs=44.1
Q ss_pred HHHHHHHHHHcCCceeeecchhHHHHHHh-ccccCCCcceEEEEEecCCeeEEEEEEEeCCeEEEEEEeCCCCCccchhh
Q 006194 183 RQATKDAGIIAGLNVARIINEPTAAAIAY-GLDKKGGEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFD 261 (657)
Q Consensus 183 r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d 261 (657)
...+..+-+..|+++ .+|+-.+-|.+.| |..........+|+|+|||+|.+++++ ++.+ . .....++|.-.+.
T Consensus 103 ~~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~--~~~~--~-~~~Sl~lG~vrl~ 176 (508)
T 3hi0_A 103 PDFIREAEAILGCEI-EVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIK--DKSC--G-EGITLPLGGLRLS 176 (508)
T ss_dssp HHHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEE--TTEE--C-CCEEESCCHHHHH
T ss_pred HHHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEee--CCee--e-eEEEecceEEehh
Confidence 345555556689986 5666555554444 333222223459999999999999986 3322 1 1223567776665
Q ss_pred H
Q 006194 262 H 262 (657)
Q Consensus 262 ~ 262 (657)
+
T Consensus 177 e 177 (508)
T 3hi0_A 177 E 177 (508)
T ss_dssp H
T ss_pred h
Confidence 4
No 78
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=94.41 E-value=0.034 Score=59.59 Aligned_cols=72 Identities=14% Similarity=0.000 Sum_probs=54.8
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhh-cCCCCCCCCCCchhhhHhHHHHHHhh
Q 006194 330 EELNMDLFKK--TMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDF-FDGKEPSKGINPDEAVAHGAAVQGGI 406 (657)
Q Consensus 330 e~~~~~~~~~--~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~-f~~~~v~~~~~~~~ava~GAa~~a~~ 406 (657)
..+++-+++. +.-.++..++.... .+.|.++||++++|.+.+.+.+. | +.++.++ ...++.|+|||+.|+.
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Qi~ADv~~-g~pV~~~-~~~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRP-DCAVYTA-NAHNDVSFGALRLIDP 435 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHHHHHHHST-TSEEEEE-SSCCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHHHHhhhcC-CCeEEEc-CCCchHHHHHHHHhCc
Confidence 4556666663 55556666665432 27899999999999999999999 9 7888766 4567899999999975
Q ss_pred h
Q 006194 407 L 407 (657)
Q Consensus 407 ~ 407 (657)
-
T Consensus 436 a 436 (482)
T 3h6e_A 436 G 436 (482)
T ss_dssp T
T ss_pred c
Confidence 4
No 79
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=94.34 E-value=0.19 Score=51.09 Aligned_cols=77 Identities=19% Similarity=0.240 Sum_probs=46.7
Q ss_pred HHHHHHHHHcCCceeeecchhHHHHHHh-ccccCC----CcceEEEEEecCCeeEEEEEEE--eC--CeEEEEEEeCCCC
Q 006194 184 QATKDAGIIAGLNVARIINEPTAAAIAY-GLDKKG----GEMNILVYDLGGGTFDVSILTI--DN--GVFEVLATSGDTH 254 (657)
Q Consensus 184 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~----~~~~vlv~D~Gggt~dvsv~~~--~~--~~~~v~~~~~~~~ 254 (657)
..+..+-+..|+++ .+|+-.+-|.+.| +..... .....+++|+|||+++++++.- .. +.+ . .....+
T Consensus 106 ~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~--~-~~~Slp 181 (343)
T 3cer_A 106 EFEDEIERILGVRP-EVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQV--Q-GAFSMN 181 (343)
T ss_dssp HHHHHHHHHHSSCC-EECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSC--S-EEEEES
T ss_pred HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCccccc--c-eeEEEe
Confidence 44455555679985 5666655555554 332211 2356999999999999999764 22 111 1 122357
Q ss_pred CccchhhHHH
Q 006194 255 LGGEDFDHRV 264 (657)
Q Consensus 255 lGG~~~d~~l 264 (657)
+|+..+.+.+
T Consensus 182 lG~v~lt~~~ 191 (343)
T 3cer_A 182 IGSVRMTERH 191 (343)
T ss_dssp CCHHHHHHHT
T ss_pred hhHHHHHHHh
Confidence 8888877664
No 80
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=94.28 E-value=0.3 Score=52.72 Aligned_cols=75 Identities=21% Similarity=0.268 Sum_probs=45.6
Q ss_pred HHHHHHHHHcCCceeeecchhHHHHHHh-ccccCC-CcceEEEEEecCCeeEEEEEEEeCCeEEEEEEeCCCCCccchhh
Q 006194 184 QATKDAGIIAGLNVARIINEPTAAAIAY-GLDKKG-GEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFD 261 (657)
Q Consensus 184 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~-~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d 261 (657)
..+..+-+..|+++ .+|+..+-|.+.| |..... .....+|+|+|||+|.+++.+ ++.+. . ....++|...+.
T Consensus 100 ~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~--~~~~~--~-~~Sl~lG~vrlt 173 (513)
T 1u6z_A 100 DFLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGE--NFEPI--L-VESRRMGCVSFA 173 (513)
T ss_dssp HHHHHHTTTCSSCE-EECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEE--TTEEE--E-EEEESCCHHHHH
T ss_pred HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEe--CCeee--E-EEEEeccHHHHH
Confidence 34444445579885 5666655555544 332221 123689999999999999874 44332 1 223578888876
Q ss_pred HHH
Q 006194 262 HRV 264 (657)
Q Consensus 262 ~~l 264 (657)
+.+
T Consensus 174 e~f 176 (513)
T 1u6z_A 174 QLY 176 (513)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 81
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=94.01 E-value=1.4 Score=46.30 Aligned_cols=43 Identities=23% Similarity=0.261 Sum_probs=28.4
Q ss_pred cCCceeeecchhHHHHHHhccccCC-CcceEEEEEecCCeeEEEEE
Q 006194 193 AGLNVARIINEPTAAAIAYGLDKKG-GEMNILVYDLGGGTFDVSIL 237 (657)
Q Consensus 193 AGl~~~~li~Ep~Aaal~y~~~~~~-~~~~vlv~D~Gggt~dvsv~ 237 (657)
.|++ +.+.|+..|+|++-...... ...+++++-+|.| +-.+++
T Consensus 208 ~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 208 TGLP-VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-EEEEEE
Confidence 4776 57899999999875433221 3456788888887 334444
No 82
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=93.51 E-value=0.6 Score=46.20 Aligned_cols=68 Identities=7% Similarity=-0.078 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCC-CcceEEEecCccCc--HHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHHHhh
Q 006194 331 ELNMDLFKKTMGPVKKALEDAGLKKT-DIREIVLVGGSTRI--PKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQGGI 406 (657)
Q Consensus 331 ~~~~~~~~~~~~~i~~~l~~~~~~~~-~i~~V~LvGG~sr~--p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~a~~ 406 (657)
.....++++....+-..+ . +... +.+.|+|.||-++. +.+++.+++.. .++ ..|..+...||+.++..
T Consensus 210 ~~A~~i~~~~~~~La~~i-~--~~~~~~p~~vvlgGGv~~~~~~~l~~~l~~~~--~~i---~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 210 PAVYSLVQNSFDDFLVRN-V--LRYNRPDLPLHFIGSVAFHYREVLSSVIKKRG--LTL---GSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHHHH-T--GGGCCTTSCEEEESHHHHHTHHHHHHHHHHTT--CCE---EEEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-h--cccCCCCceEEEECchHHhhHHHHHHHHHHcC--Cee---cccCcCHHHHHHHHHHh
Confidence 345556666666666666 2 2222 56789999998876 66666666543 122 23567889999999864
No 83
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=92.89 E-value=7.9 Score=38.22 Aligned_cols=64 Identities=14% Similarity=0.090 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccC--cHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHHHh
Q 006194 332 LNMDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTR--IPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQGG 405 (657)
Q Consensus 332 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr--~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~a~ 405 (657)
.+..++++....+-..+...-.. +.+.|+|.||.+. .|++.+.+++.+ . .|+.+.+.||+++|.
T Consensus 227 ~A~~i~~~~~~~L~~~l~~l~~~--~p~~VvlgGgv~~~~~~~l~~~l~~~i-----~---~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 227 EADALLRQAGEDAWAIARALDPQ--DELPVALCGGLGQALRDWLPPGFRQRL-----V---APQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTT--CCSCEEEESHHHHHTGGGSCHHHHHHC-----C---CCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC--CCCeEEEECCchHhHHHHHHHHHHhhc-----c---CCCCCHHHHHHHHHh
Confidence 45566666666666666654322 5678999998864 566777776654 1 245777999999874
No 84
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=92.56 E-value=6.1 Score=37.87 Aligned_cols=20 Identities=25% Similarity=0.502 Sum_probs=17.7
Q ss_pred EEEEEcCccceEEEEEECCe
Q 006194 34 VIGIDLGTTYSCVGVYRNGR 53 (657)
Q Consensus 34 viGIDlGTt~s~va~~~~g~ 53 (657)
.++||+|+|+++.|++++++
T Consensus 5 ~L~IDIGNT~ik~gl~~~~~ 24 (249)
T 3bex_A 5 YLLVDVGNTHSVFSITEDGK 24 (249)
T ss_dssp EEEEEECSSEEEEEEESSSS
T ss_pred EEEEEECCCeEEEEEEECCE
Confidence 69999999999999997553
No 85
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=92.11 E-value=1.5 Score=45.01 Aligned_cols=21 Identities=24% Similarity=0.215 Sum_probs=18.7
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 006194 31 LGTVIGIDLGTTYSCVGVYRN 51 (657)
Q Consensus 31 ~~~viGIDlGTt~s~va~~~~ 51 (657)
|++++|||+|.|++++++++.
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~ 48 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVRE 48 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEE
T ss_pred CCeEEEEEEccccEEEEEEec
Confidence 568999999999999999863
No 86
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=89.80 E-value=1.8 Score=45.77 Aligned_cols=58 Identities=10% Similarity=0.055 Sum_probs=42.2
Q ss_pred CHHHHHHHHHHHHHcCCce--eeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEEE
Q 006194 179 NDAQRQATKDAGIIAGLNV--ARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTI 239 (657)
Q Consensus 179 ~~~qr~~l~~Aa~~AGl~~--~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~~ 239 (657)
...-.+.+++|.+.-|+++ +.++|+.+|++++..+.. ..+++-+=+|-|+=-..+...
T Consensus 184 G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~---~~~~iglIlGTG~N~~y~e~~ 243 (485)
T 3o8m_A 184 GHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD---PQTKMGIIIGTGVNGAYYDVV 243 (485)
T ss_dssp TSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC---TTEEEEEEESSSEEEEEEEEG
T ss_pred CccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC---CCcEEEEEEecCcceEEEeec
Confidence 3556788999998889864 678999999998876653 446666677888755555543
No 87
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=89.09 E-value=0.71 Score=48.77 Aligned_cols=56 Identities=13% Similarity=-0.029 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHcCCc--eeeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEEE
Q 006194 181 AQRQATKDAGIIAGLN--VARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTI 239 (657)
Q Consensus 181 ~qr~~l~~Aa~~AGl~--~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~~ 239 (657)
.-++.+.++.+.-|++ ++.++|+..|++++-.+.. ..+++.+=+|.|+=-..+...
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~---~~~~iglilGTGvgg~~i~~~ 221 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTD---AXIKMGIIFGSGVNAAYWCDS 221 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHC---TTEEEEEEESSSEEEEEEECG
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcC---CccEEEEEECcEEEEEEEECC
Confidence 5577888888766775 4789999999999876632 446777778888655555543
No 88
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=85.77 E-value=2.2 Score=43.18 Aligned_cols=74 Identities=18% Similarity=0.233 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCC----CCCCchhhhHhHHHHHHhh
Q 006194 331 ELNMDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPS----KGINPDEAVAHGAAVQGGI 406 (657)
Q Consensus 331 ~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~----~~~~~~~ava~GAa~~a~~ 406 (657)
++..-+.+-+...|.+.++... ..++.|+++||+++.|.+.+.|++.+++.++. ..++++.-=|..-|++|..
T Consensus 260 Dv~ATLt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~ 336 (371)
T 3qbx_A 260 DIQATLLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHR 336 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHH
Confidence 3444444445555666665543 23678999999999999999999999655442 2334555445556666654
Q ss_pred h
Q 006194 407 L 407 (657)
Q Consensus 407 ~ 407 (657)
.
T Consensus 337 ~ 337 (371)
T 3qbx_A 337 F 337 (371)
T ss_dssp H
T ss_pred H
Confidence 3
No 89
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=81.63 E-value=3.3 Score=41.97 Aligned_cols=74 Identities=18% Similarity=0.215 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCC----CCCCchhhhHhHHHHHHh
Q 006194 330 EELNMDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPS----KGINPDEAVAHGAAVQGG 405 (657)
Q Consensus 330 e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~----~~~~~~~ava~GAa~~a~ 405 (657)
+++..-+.+-+...|.+.++... ..+.|+++||+++.|.+.+.|++.+++.++. ..++++.-=|..-|++|.
T Consensus 266 ~Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aFA~LA~ 341 (370)
T 3cqy_A 266 EDIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAFAWLAM 341 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHHHHHHH
Confidence 34555555555666666776542 3568999999999999999999999654432 223455433444456665
Q ss_pred hh
Q 006194 406 IL 407 (657)
Q Consensus 406 ~~ 407 (657)
..
T Consensus 342 ~~ 343 (370)
T 3cqy_A 342 RY 343 (370)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 90
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=80.44 E-value=6.4 Score=41.41 Aligned_cols=57 Identities=16% Similarity=0.109 Sum_probs=41.4
Q ss_pred CHHHHHHHHHHHHHcCCce--eeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEE
Q 006194 179 NDAQRQATKDAGIIAGLNV--ARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILT 238 (657)
Q Consensus 179 ~~~qr~~l~~Aa~~AGl~~--~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~ 238 (657)
...-.+.+++|...-|+++ +.++|+..|++++-++.. +.+++-+=+|.|+=-..+..
T Consensus 171 g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~---~~~~iglIlGTG~na~yve~ 229 (451)
T 1bdg_A 171 GHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED---PKCAVGLIVGTGTNVAYIED 229 (451)
T ss_dssp TSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC---TTEEEEEEESSSEEEEEEEE
T ss_pred CCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC---CCcEEEEEEeCCcceEEEEc
Confidence 4456788888888778863 488999999998876663 34667777888865544444
No 91
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=77.54 E-value=9.5 Score=38.83 Aligned_cols=23 Identities=22% Similarity=0.312 Sum_probs=19.5
Q ss_pred CCeEEEEEcCccceEEEEEECCe
Q 006194 31 LGTVIGIDLGTTYSCVGVYRNGR 53 (657)
Q Consensus 31 ~~~viGIDlGTt~s~va~~~~g~ 53 (657)
..+++|||+|.|+++++++++|+
T Consensus 8 ~~~~lgiDIGgt~i~~~l~d~G~ 30 (366)
T 3mcp_A 8 NRIVMTLDAGGTNFVFSAIQGGK 30 (366)
T ss_dssp CCEEEEEECSSSEEEEEEEETTE
T ss_pred CCEEEEEEECcceEEEEEEECCE
Confidence 35899999999999999988443
No 92
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=77.03 E-value=1.3 Score=47.54 Aligned_cols=22 Identities=23% Similarity=0.389 Sum_probs=18.7
Q ss_pred CCCCeEEEEEcCccceEEEEEE
Q 006194 29 TKLGTVIGIDLGTTYSCVGVYR 50 (657)
Q Consensus 29 ~~~~~viGIDlGTt~s~va~~~ 50 (657)
|.|..++|||+|||++++++++
T Consensus 1 m~~~~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 1 MTFRNCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp -CCEEEEEEEECSSEEEEEEEE
T ss_pred CCcceEEEEEecCCCceEEEEE
Confidence 3466899999999999999985
No 93
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=75.06 E-value=7.5 Score=38.40 Aligned_cols=38 Identities=21% Similarity=0.163 Sum_probs=26.6
Q ss_pred HcCCceeeecchhHHHHHHhccccCC-CcceEEEEEecCC
Q 006194 192 IAGLNVARIINEPTAAAIAYGLDKKG-GEMNILVYDLGGG 230 (657)
Q Consensus 192 ~AGl~~~~li~Ep~Aaal~y~~~~~~-~~~~vlv~D~Ggg 230 (657)
..|++ +.+.|+..|+|++-...... ..++++++-+|.|
T Consensus 96 ~~~~p-V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtG 134 (302)
T 3epq_A 96 EMXIP-VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTG 134 (302)
T ss_dssp HHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS
T ss_pred HhCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc
Confidence 34776 67999999999976443222 3456888888876
No 94
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=74.82 E-value=97 Score=33.35 Aligned_cols=80 Identities=16% Similarity=0.171 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCC-CCCchhhhHhHHHHH
Q 006194 326 RARFEELNMDLF-KKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSK-GINPDEAVAHGAAVQ 403 (657)
Q Consensus 326 r~~fe~~~~~~~-~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~-~~~~~~ava~GAa~~ 403 (657)
..++-..++..+ +-+.+.+..+.+..+ ++.|+|.||.+....+++.|.+..+-..+.. +...|.++++|+|.+
T Consensus 280 ~~dIAasfQ~~l~~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~ 354 (576)
T 3ven_A 280 YRDLAATAQAALERAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAA 354 (576)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHH
Confidence 344444444333 333445555555544 5789999999999999999987652112222 234588999999999
Q ss_pred HhhhcCC
Q 006194 404 GGILSGE 410 (657)
Q Consensus 404 a~~~~~~ 410 (657)
+....+.
T Consensus 355 a~~~~g~ 361 (576)
T 3ven_A 355 VAVELGD 361 (576)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 9876554
No 95
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=73.95 E-value=6.3 Score=43.28 Aligned_cols=50 Identities=16% Similarity=0.163 Sum_probs=39.1
Q ss_pred CcceEEEecCccCcHHHHHHHHhhcCCCCCCC---CCCchhhhHhHHHHHHhh
Q 006194 357 DIREIVLVGGSTRIPKIQQLLKDFFDGKEPSK---GINPDEAVAHGAAVQGGI 406 (657)
Q Consensus 357 ~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~---~~~~~~ava~GAa~~a~~ 406 (657)
.++.|+|+||.+....+++.|.+.+.+.++.. ..--|-++|+|.|++|+.
T Consensus 599 g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 599 GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 35789999999999999999999874333322 224588999999998864
No 96
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=73.28 E-value=22 Score=34.12 Aligned_cols=43 Identities=30% Similarity=0.448 Sum_probs=27.7
Q ss_pred cCCceeeecchhHHHHHHhccccCC-Cc-ceEEEEEecCCeeEEEEE
Q 006194 193 AGLNVARIINEPTAAAIAYGLDKKG-GE-MNILVYDLGGGTFDVSIL 237 (657)
Q Consensus 193 AGl~~~~li~Ep~Aaal~y~~~~~~-~~-~~vlv~D~Gggt~dvsv~ 237 (657)
.|++ +.+.|+..|+|++....... .. ..++++-+|.| +-.+++
T Consensus 114 ~~~p-V~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtG-IG~giv 158 (267)
T 1woq_A 114 LGRP-VEVINDADAAGLAEARYGAGAGVKGTVLVITLGTG-IGSAFI 158 (267)
T ss_dssp HTSC-EEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcc-eEEEEE
Confidence 4776 68999999999985443222 12 35677788877 444443
No 97
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=73.12 E-value=5.3 Score=44.85 Aligned_cols=64 Identities=22% Similarity=0.226 Sum_probs=44.7
Q ss_pred HHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcC--CCCCCC---CCCchhhhHhHHHHHHhhhcC
Q 006194 341 MGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFD--GKEPSK---GINPDEAVAHGAAVQGGILSG 409 (657)
Q Consensus 341 ~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~--~~~v~~---~~~~~~ava~GAa~~a~~~~~ 409 (657)
.+.+.++.+..+ ++.|+|+||-+....+++.|.+.+. +.++.. ..--|-++|+|.|++|+....
T Consensus 682 ~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~~ 750 (761)
T 3vth_A 682 YDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKILE 750 (761)
T ss_dssp HHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHhc
Confidence 334444444433 5789999999999999999988872 233322 123488999999999876544
No 98
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=72.86 E-value=2.2 Score=46.16 Aligned_cols=21 Identities=19% Similarity=0.105 Sum_probs=18.9
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 006194 31 LGTVIGIDLGTTYSCVGVYRN 51 (657)
Q Consensus 31 ~~~viGIDlGTt~s~va~~~~ 51 (657)
|.+++|||+|||++++++++.
T Consensus 9 ~~~~lgID~GTts~Ka~l~d~ 29 (538)
T 4bc3_A 9 RRCCLGWDFSTQQVKVVAVDA 29 (538)
T ss_dssp CCEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEEEcCcCEEEEEECC
Confidence 469999999999999999974
No 99
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=72.67 E-value=2.9 Score=36.07 Aligned_cols=22 Identities=32% Similarity=0.359 Sum_probs=19.4
Q ss_pred CCeEEEEEcCccceEEEEEECC
Q 006194 31 LGTVIGIDLGTTYSCVGVYRNG 52 (657)
Q Consensus 31 ~~~viGIDlGTt~s~va~~~~g 52 (657)
|+.++|||+|+..+.||+.++.
T Consensus 2 ~~~iLglD~G~kriGvAvsd~~ 23 (138)
T 1nu0_A 2 SGTLMAFDFGTKSIGVAVGQRI 23 (138)
T ss_dssp CCEEEEEECCSSEEEEEEEETT
T ss_pred CCeEEEEEeCCCEEEEEEEcCC
Confidence 3579999999999999999865
No 100
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=71.55 E-value=14 Score=42.73 Aligned_cols=56 Identities=14% Similarity=0.184 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHcC-Cc--eeeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEE
Q 006194 180 DAQRQATKDAGIIAG-LN--VARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILT 238 (657)
Q Consensus 180 ~~qr~~l~~Aa~~AG-l~--~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~ 238 (657)
..-++.+.++...-| ++ ++.++|+..|++++-.+.. ..+++.+=+|-|+=-..+..
T Consensus 183 ~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~~---~~~~iglilGTGvngg~i~~ 241 (917)
T 1cza_N 183 ADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDD---QHCEVGLIIGTGTNACYMEE 241 (917)
T ss_dssp SBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHC---TTEEEEEEESSSEEEEEEEE
T ss_pred CchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhccC---CCcEEEEEEECCcceEEEec
Confidence 355677778877666 64 6899999999999876652 45677777888865444444
No 101
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=71.45 E-value=18 Score=41.80 Aligned_cols=57 Identities=11% Similarity=0.119 Sum_probs=40.0
Q ss_pred CHHHHHHHHHHHHHc-CC--ceeeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEE
Q 006194 179 NDAQRQATKDAGIIA-GL--NVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILT 238 (657)
Q Consensus 179 ~~~qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~ 238 (657)
...-.+.+++|...- ++ +++.++|+..|++++-++.. +.+++-+=+|.|+=-..+..
T Consensus 630 g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~---~~~~iglIlGTG~na~y~e~ 689 (917)
T 1cza_N 630 GHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEE---PTCEVGLIVGTGSNACYMEE 689 (917)
T ss_dssp TSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTC---TTEEEEEEESSSEEEEEEEE
T ss_pred CCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCC---CCcEEEEEEeCCeeEEEEEc
Confidence 455677888887654 45 58899999999988876663 34666677788875554444
No 102
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=71.06 E-value=8.8 Score=43.24 Aligned_cols=62 Identities=16% Similarity=0.289 Sum_probs=44.5
Q ss_pred HHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCC--CCCCCCC---CchhhhHhHHHHHHhhh
Q 006194 341 MGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDG--KEPSKGI---NPDEAVAHGAAVQGGIL 407 (657)
Q Consensus 341 ~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~--~~v~~~~---~~~~ava~GAa~~a~~~ 407 (657)
.+.+.++.+.. .++.|+|.||.+....+++.|.+.+.. .++..+. --|..+|+|+|++|+..
T Consensus 694 ~~~~~~a~~~t-----g~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~ 760 (772)
T 4g9i_A 694 AHTAVERAREF-----GVKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLY 760 (772)
T ss_dssp HHHHHHHHHTT-----TCSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-----CcCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHH
Confidence 34444444443 357899999999999999999998732 3444432 23889999999988754
No 103
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=70.89 E-value=19 Score=35.63 Aligned_cols=50 Identities=18% Similarity=0.242 Sum_probs=32.6
Q ss_pred CcceEEEecCccCc-----HHHHHHHHhhcCC------CCCCCCCCchhhhHhHHHHHHhh
Q 006194 357 DIREIVLVGGSTRI-----PKIQQLLKDFFDG------KEPSKGINPDEAVAHGAAVQGGI 406 (657)
Q Consensus 357 ~i~~V~LvGG~sr~-----p~v~~~l~~~f~~------~~v~~~~~~~~ava~GAa~~a~~ 406 (657)
+++.|+|-||.++. +.+++.+++.+.. .++....-.+.+.++|||.++..
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~ 299 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQ 299 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHH
Confidence 45789999988765 4577777766511 11222223467899999988753
No 104
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=70.15 E-value=3 Score=40.41 Aligned_cols=71 Identities=17% Similarity=0.295 Sum_probs=39.6
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--CCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHH
Q 006194 324 LTRARFEELNMDLFKKTMGPVKKALEDAGLK--KTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAA 401 (657)
Q Consensus 324 itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~--~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa 401 (657)
+-+...+.+-..++......|+..+++.... ...--.|+++||.+.. +... + .....+|+ -+-.|..
T Consensus 182 ~g~nT~~ai~sGi~~g~~g~i~~~i~~~~~~~~~~~~~~vi~TGG~a~~--l~~~--~------~~~~~~~~-LvL~GL~ 250 (266)
T 3djc_A 182 VGRSTIESIQSGVYYGVLGACKELIQRIHHEAFNGDQILILATGGFASL--FDKQ--G------LYDHLVPD-LVLQGIR 250 (266)
T ss_dssp CBSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEEESTTGGG--GTTT--T------CCSEECTT-HHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEECCChHH--hccC--C------CCCEECcC-hHHHHHH
Confidence 4556667777777777766666666543211 1122479999998753 2221 1 11123444 6677877
Q ss_pred HHHh
Q 006194 402 VQGG 405 (657)
Q Consensus 402 ~~a~ 405 (657)
+...
T Consensus 251 ~i~~ 254 (266)
T 3djc_A 251 LAAM 254 (266)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6653
No 105
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=69.52 E-value=2.9 Score=45.49 Aligned_cols=21 Identities=33% Similarity=0.548 Sum_probs=18.8
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 006194 31 LGTVIGIDLGTTYSCVGVYRN 51 (657)
Q Consensus 31 ~~~viGIDlGTt~s~va~~~~ 51 (657)
|.+++|||+|||++++++++.
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~ 24 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDL 24 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEET
T ss_pred CcEEEEEEECcccEEEEEECC
Confidence 458999999999999999964
No 106
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=69.00 E-value=3.1 Score=44.74 Aligned_cols=19 Identities=32% Similarity=0.268 Sum_probs=17.9
Q ss_pred CeEEEEEcCccceEEEEEE
Q 006194 32 GTVIGIDLGTTYSCVGVYR 50 (657)
Q Consensus 32 ~~viGIDlGTt~s~va~~~ 50 (657)
.+++|||+|||++++++++
T Consensus 5 ~~~lgIDiGtts~ka~l~d 23 (515)
T 3i8b_A 5 TLVAGVDTSTQSCKVRVTD 23 (515)
T ss_dssp CEEEEEEECSSEEEEEEEE
T ss_pred cEEEEEEeccccEEEEEEE
Confidence 5899999999999999998
No 107
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=68.90 E-value=2.6 Score=45.16 Aligned_cols=22 Identities=23% Similarity=0.338 Sum_probs=18.8
Q ss_pred CCeEEEEEcCccceEEEEEECC
Q 006194 31 LGTVIGIDLGTTYSCVGVYRNG 52 (657)
Q Consensus 31 ~~~viGIDlGTt~s~va~~~~g 52 (657)
|.+++|||+|||++++++++..
T Consensus 3 m~~~lgIDiGtT~~k~~l~d~~ 24 (503)
T 2w40_A 3 MNVILSIDQSTQSTKVFFYDEE 24 (503)
T ss_dssp CEEEEEEEECSSEEEEEEEETT
T ss_pred ccEEEEEEeCCcceEEEEECCC
Confidence 3579999999999999999643
No 108
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=68.68 E-value=2 Score=45.78 Aligned_cols=21 Identities=43% Similarity=0.545 Sum_probs=16.7
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 006194 31 LGTVIGIDLGTTYSCVGVYRN 51 (657)
Q Consensus 31 ~~~viGIDlGTt~s~va~~~~ 51 (657)
|.+++|||+|||++++++++.
T Consensus 5 m~~~lgIDiGTts~Ka~l~d~ 25 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWDL 25 (482)
T ss_dssp ---CEEEEECSSEEEEEEECT
T ss_pred hceEEEEEcCCCCeEEEEEEC
Confidence 468999999999999999963
No 109
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=68.30 E-value=24 Score=36.65 Aligned_cols=56 Identities=18% Similarity=0.186 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHcC---CceeeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEE
Q 006194 180 DAQRQATKDAGIIAG---LNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILT 238 (657)
Q Consensus 180 ~~qr~~l~~Aa~~AG---l~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~ 238 (657)
..-.+.+++|.+.-| ++++.++|+.+|+.++.++.. +.+.+-+=+|-||=-+.+.+
T Consensus 160 ~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~---~~~~iglIlGTGtNa~y~e~ 218 (445)
T 3hm8_A 160 QDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYED---PRCEIGLIVGTGTNACYMEE 218 (445)
T ss_dssp SBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTC---TTEEEEEEESSSEEEEEEEE
T ss_pred CcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCC---CCceEEEEEeCCceEEEEEe
Confidence 445778888887753 467889999999988866543 34556666787764444433
No 110
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=68.09 E-value=3.2 Score=33.38 Aligned_cols=20 Identities=25% Similarity=0.328 Sum_probs=17.5
Q ss_pred eEEEEEcCccceEEEEEECC
Q 006194 33 TVIGIDLGTTYSCVGVYRNG 52 (657)
Q Consensus 33 ~viGIDlGTt~s~va~~~~g 52 (657)
.++|||+|+..+.+|+.++.
T Consensus 2 riLglD~G~kriGvAvsd~~ 21 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVGEEG 21 (98)
T ss_dssp CEEEEEESSSEEEEEEECSC
T ss_pred cEEEEEeCCCEEEEEEEeCC
Confidence 38999999999999998654
No 111
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=67.93 E-value=2.6 Score=45.28 Aligned_cols=21 Identities=29% Similarity=0.289 Sum_probs=18.6
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 006194 31 LGTVIGIDLGTTYSCVGVYRN 51 (657)
Q Consensus 31 ~~~viGIDlGTt~s~va~~~~ 51 (657)
|.+++|||+|||++++++++.
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~ 22 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDH 22 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECT
T ss_pred CcEEEEEEcCCcceEEEEECC
Confidence 458999999999999999953
No 112
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=67.77 E-value=8.6 Score=38.93 Aligned_cols=44 Identities=20% Similarity=0.298 Sum_probs=27.8
Q ss_pred CCceeeecchhHHHHHHh-----ccccC--CCcceEEEEEecCCeeEEEEEE
Q 006194 194 GLNVARIINEPTAAAIAY-----GLDKK--GGEMNILVYDLGGGTFDVSILT 238 (657)
Q Consensus 194 Gl~~~~li~Ep~Aaal~y-----~~~~~--~~~~~vlv~D~Gggt~dvsv~~ 238 (657)
|+. +++|+-.+-|.+.| .+..- ...++++|+|+|||++.++...
T Consensus 108 g~~-v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 108 LVE-AKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp EEE-EEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSEEEEEEEC
T ss_pred CCe-EEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCceEEEEec
Confidence 443 46666555554443 33221 1234699999999999999873
No 113
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=67.47 E-value=3.3 Score=45.22 Aligned_cols=21 Identities=24% Similarity=0.224 Sum_probs=18.3
Q ss_pred CCeEEEEEcCccceEEEEEEC
Q 006194 31 LGTVIGIDLGTTYSCVGVYRN 51 (657)
Q Consensus 31 ~~~viGIDlGTt~s~va~~~~ 51 (657)
|.++||||+|||++++++++.
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEET
T ss_pred CCEEEEEecCCcceEEEEEEC
Confidence 358999999999999999974
No 114
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=67.32 E-value=2.4 Score=45.34 Aligned_cols=20 Identities=25% Similarity=0.306 Sum_probs=17.3
Q ss_pred CeEEEEEcCccceEEEEEEC
Q 006194 32 GTVIGIDLGTTYSCVGVYRN 51 (657)
Q Consensus 32 ~~viGIDlGTt~s~va~~~~ 51 (657)
.+++|||+|||++++++++.
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~ 21 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTL 21 (495)
T ss_dssp -CEEEEEECSSEEEEEEECT
T ss_pred cEEEEEeeCCcceEEEEECC
Confidence 47899999999999999953
No 115
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=64.32 E-value=3.5 Score=44.10 Aligned_cols=20 Identities=25% Similarity=0.341 Sum_probs=18.0
Q ss_pred CeEEEEEcCccceEEEEEEC
Q 006194 32 GTVIGIDLGTTYSCVGVYRN 51 (657)
Q Consensus 32 ~~viGIDlGTt~s~va~~~~ 51 (657)
.+++|||+|||++++++++.
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~ 22 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDR 22 (497)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred cEEEEEecCCchhEEEEECC
Confidence 57999999999999999964
No 116
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=63.76 E-value=25 Score=36.88 Aligned_cols=56 Identities=16% Similarity=0.151 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHcC---CceeeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEE
Q 006194 180 DAQRQATKDAGIIAG---LNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILT 238 (657)
Q Consensus 180 ~~qr~~l~~Aa~~AG---l~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~ 238 (657)
..-.+.+++|.+.-| ++++.++|+.+|.-++.++.. +...+-+=+|-||=-+.+-+
T Consensus 184 ~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~---~~~~iGlI~GTGtNa~Y~E~ 242 (470)
T 3f9m_A 184 NNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYED---HQCEVGMIVGTGCNACYMEE 242 (470)
T ss_dssp SBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTC---TTEEEEEEESSSEEEEEEEE
T ss_pred ccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCC---CCceEEEEEecCCceEEeee
Confidence 455788999999887 357789999999887766544 34555556788765443333
No 117
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=60.71 E-value=67 Score=26.15 Aligned_cols=54 Identities=17% Similarity=0.226 Sum_probs=40.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 006194 588 IDSDDKERIESTLKEALEWLDDNQNAEKDDFDEKMKEVEAVCNPVIKQVYEKNGGSSS 645 (657)
Q Consensus 588 ~~~~e~~~i~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e~~~~~~~ 645 (657)
+-...++.+...|++-.+-++. ..+.+..+++.++.....+...+++..+++++
T Consensus 63 fv~~~~~ea~~~L~~~~e~ie~----~i~~le~~~~~l~~~l~~lk~~l~~~~~~~~~ 116 (117)
T 2zqm_A 63 IVKTTKDKAVAELKEKIETLEV----RLNALERQEKKLNEKLKELTAQIQSALRPPTA 116 (117)
T ss_dssp EEEECHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHSCC--
T ss_pred HhhccHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 3344667777777777777765 47788889999999999999999988877554
No 118
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=60.29 E-value=4.5 Score=43.31 Aligned_cols=20 Identities=30% Similarity=0.395 Sum_probs=18.0
Q ss_pred CeEEEEEcCccceEEEEEEC
Q 006194 32 GTVIGIDLGTTYSCVGVYRN 51 (657)
Q Consensus 32 ~~viGIDlGTt~s~va~~~~ 51 (657)
.+++|||+|||++++++++.
T Consensus 6 ~~~lgIDiGtts~k~~l~d~ 25 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQ 25 (501)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred cEEEEEEeCccceEEEEEcC
Confidence 48999999999999999963
No 119
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=57.64 E-value=5.4 Score=34.90 Aligned_cols=19 Identities=32% Similarity=0.552 Sum_probs=17.2
Q ss_pred eEEEEEcCccceEEEEEEC
Q 006194 33 TVIGIDLGTTYSCVGVYRN 51 (657)
Q Consensus 33 ~viGIDlGTt~s~va~~~~ 51 (657)
.++|||+|+..|.+|+.++
T Consensus 4 riLGiDpG~~riGvAv~d~ 22 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDE 22 (150)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEEccCCEEEEEEEEC
Confidence 5899999999999999864
No 120
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=56.29 E-value=22 Score=37.27 Aligned_cols=43 Identities=21% Similarity=0.301 Sum_probs=28.5
Q ss_pred ceeeecchhHHHHHHh-----ccccC-----------CCcceEEEEEecCCeeEEEEEE
Q 006194 196 NVARIINEPTAAAIAY-----GLDKK-----------GGEMNILVYDLGGGTFDVSILT 238 (657)
Q Consensus 196 ~~~~li~Ep~Aaal~y-----~~~~~-----------~~~~~vlv~D~Gggt~dvsv~~ 238 (657)
..+++|+-.+=|.+.| .+..- .....++++|+|||++.++...
T Consensus 150 ~~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~~~~~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 150 RGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEECSSCCCCCEEEEECSSEEEEEEEC
T ss_pred CceEEcCchHHhhhhHHHHHhhhcccccccccccccccCCCceEEEEcCCCceEEEecc
Confidence 3567887666665554 22211 0135689999999999999874
No 121
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=55.22 E-value=1.9e+02 Score=29.60 Aligned_cols=26 Identities=23% Similarity=0.406 Sum_probs=23.8
Q ss_pred CCcceEEEecCcc-CcHHHHHHHHhhc
Q 006194 356 TDIREIVLVGGST-RIPKIQQLLKDFF 381 (657)
Q Consensus 356 ~~i~~V~LvGG~s-r~p~v~~~l~~~f 381 (657)
..+|.|+++||-+ +.+.+|+.+.+.+
T Consensus 329 ggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 329 HRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp SSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred CCCCEEEECccccccCHHHHHHHHhhH
Confidence 4689999999999 9999999999876
No 122
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=53.73 E-value=16 Score=32.15 Aligned_cols=18 Identities=39% Similarity=0.695 Sum_probs=16.4
Q ss_pred eEEEEEcCccceEEEEEE
Q 006194 33 TVIGIDLGTTYSCVGVYR 50 (657)
Q Consensus 33 ~viGIDlGTt~s~va~~~ 50 (657)
.++|||.|++++..++.+
T Consensus 2 ~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp EEEEEECCSSEEEEEEEE
T ss_pred EEEEEccCCCCeeEEEEE
Confidence 589999999999999884
No 123
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=52.81 E-value=2e+02 Score=29.25 Aligned_cols=43 Identities=9% Similarity=0.087 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcceEEEecCcc-CcHHHHHHHHhhc
Q 006194 335 DLFKKTMGPVKKALEDAGLKKTDIREIVLVGGST-RIPKIQQLLKDFF 381 (657)
Q Consensus 335 ~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s-r~p~v~~~l~~~f 381 (657)
-.+.++.+.|-......+ .+|.|+++||-+ +.+.+|+.+.+.+
T Consensus 304 ~f~yri~k~IGa~~a~Lg----gvDaIVFTgGIGEns~~vR~~i~~~l 347 (403)
T 2iir_A 304 IYDYRIAKYIGAYAAAMN----GVDAIVFTAGVGENSPITREDVCSYL 347 (403)
T ss_dssp HHHHHHHHHHHHHHHHHT----CCSEEEEEHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhC----CCCEEEECcccccCCHHHHHHHHhhh
Confidence 344455555544444433 489999999999 9999999999877
No 124
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=51.77 E-value=44 Score=24.79 Aligned_cols=43 Identities=14% Similarity=0.204 Sum_probs=30.9
Q ss_pred HHHHHHHHHhhHHHHHHHhhhchHHHHHHHHHHHHhhhhhcCCC
Q 006194 546 VKEAEEFAEEDKKVRERVDSRNKLETYIYNMRSTINDKLADKID 589 (657)
Q Consensus 546 ~~~~~~~~~~D~~~~~~~ea~N~LE~~iy~~r~~l~~~~~~~~~ 589 (657)
.++.++...+|...++......+.|..|-.++..|.. |+.+++
T Consensus 29 ~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDK-frSVl~ 71 (72)
T 3nmd_A 29 QEKIEELRQRDALIDELELELDQKDELIQMLQNELDK-YRSVIR 71 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhccCC
Confidence 3455667777777777777788888888888887754 665554
No 125
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=51.09 E-value=1.8e+02 Score=29.62 Aligned_cols=43 Identities=9% Similarity=-0.006 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcceEEEecCcc-CcHHHHHHHHhhc
Q 006194 335 DLFKKTMGPVKKALEDAGLKKTDIREIVLVGGST-RIPKIQQLLKDFF 381 (657)
Q Consensus 335 ~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s-r~p~v~~~l~~~f 381 (657)
-.+.++.+.|-...... ..+|.|+++||-+ +.+.+|+.+.+.+
T Consensus 304 ~f~yri~k~IGa~~a~L----ggvDaiVFTgGIGEns~~vR~~i~~~l 347 (408)
T 1g99_A 304 IFAYKVKKFIGEYSAVL----NGADAVVFTAGIGENSASIRKRILTGL 347 (408)
T ss_dssp HHHHHHHHHHHHHHHHT----TSCSEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhh----CCCCEEEECccccccCHHHHHHHHhhh
Confidence 34445555554444443 3589999999999 9999999999876
No 126
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=50.78 E-value=49 Score=28.71 Aligned_cols=46 Identities=15% Similarity=0.291 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 006194 592 DKERIESTLKEALEWLDDN---QNAEKDDFDEKMKEVEAVCNPVIKQVY 637 (657)
Q Consensus 592 e~~~i~~~l~~~~~WL~~~---~~a~~~~~~~kl~~L~~~~~~i~~r~~ 637 (657)
+|..+..+|.++.....+. .....++|++|++.++++...+...+.
T Consensus 97 dR~~L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~vkkeL~~hi~ 145 (152)
T 4fla_A 97 DRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKSHIQ 145 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 5677888888777665554 123567899999999888887776653
No 127
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=49.72 E-value=96 Score=31.79 Aligned_cols=26 Identities=15% Similarity=0.299 Sum_probs=22.8
Q ss_pred CCcceEEEecCcc-CcHHHHHHHHhhc
Q 006194 356 TDIREIVLVGGST-RIPKIQQLLKDFF 381 (657)
Q Consensus 356 ~~i~~V~LvGG~s-r~p~v~~~l~~~f 381 (657)
..+|.|+++||-+ +.+.||+.+.+.+
T Consensus 338 G~vDaIVFTgGIGEns~~vR~~v~~~l 364 (415)
T 3sk3_A 338 GRLDAVVFTGGIGENAAMVRELSLGKL 364 (415)
T ss_dssp TCCCEEEEEHHHHTTCHHHHHHHHHTC
T ss_pred CCCCEEEECCccccCCHHHHHHHHhhc
Confidence 3589999999998 7999999998876
No 128
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=48.57 E-value=46 Score=33.84 Aligned_cols=43 Identities=7% Similarity=0.032 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcceEEEecCcc-CcHHHHHHHHhhc
Q 006194 335 DLFKKTMGPVKKALEDAGLKKTDIREIVLVGGST-RIPKIQQLLKDFF 381 (657)
Q Consensus 335 ~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s-r~p~v~~~l~~~f 381 (657)
-.+.++.+.|-...... ..+|.|+++||-+ +.+.+++.+.+.+
T Consensus 305 ~f~yriak~Iga~aa~L----G~vDaIVfTGGIgEns~~vr~~I~~~l 348 (398)
T 4ijn_A 305 VYIHRLRKYIGAYMAVL----GRTDVISFTAGVGENVPPVRRDALAGL 348 (398)
T ss_dssp HHHHHHHHHHHHHHHHH----SSCCEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHh----CCCcEEEECCccccccHHHHHHHHHHH
Confidence 33444444444433332 3589999999988 6788999998876
No 129
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=48.23 E-value=8.6 Score=41.09 Aligned_cols=19 Identities=42% Similarity=0.468 Sum_probs=17.2
Q ss_pred eEEEEEcCccceEEEEEEC
Q 006194 33 TVIGIDLGTTYSCVGVYRN 51 (657)
Q Consensus 33 ~viGIDlGTt~s~va~~~~ 51 (657)
+++|||+|||++++++++.
T Consensus 3 ~~lgiDiGtts~k~~l~d~ 21 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDH 21 (504)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEecCCcceEEEEECC
Confidence 6899999999999999963
No 130
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=47.46 E-value=8.5 Score=40.89 Aligned_cols=18 Identities=44% Similarity=0.499 Sum_probs=16.3
Q ss_pred EEEEEcCccceEEEEEEC
Q 006194 34 VIGIDLGTTYSCVGVYRN 51 (657)
Q Consensus 34 viGIDlGTt~s~va~~~~ 51 (657)
++|||+|||++++++++.
T Consensus 2 ~lgiDiGtt~~k~~l~d~ 19 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNE 19 (484)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEEecCcccEEEEECC
Confidence 699999999999999963
No 131
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=46.92 E-value=12 Score=37.50 Aligned_cols=42 Identities=31% Similarity=0.261 Sum_probs=29.2
Q ss_pred HHcCCceeeecchhHHHHHHhcccc-----------CCCcceEEEEEecCCee
Q 006194 191 IIAGLNVARIINEPTAAAIAYGLDK-----------KGGEMNILVYDLGGGTF 232 (657)
Q Consensus 191 ~~AGl~~~~li~Ep~Aaal~y~~~~-----------~~~~~~vlv~D~Gggt~ 232 (657)
+..|++.+.+.|+..|+|++-.... ....++++++-+|.|-=
T Consensus 99 ~~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTGiG 151 (332)
T 1sz2_A 99 KNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGLG 151 (332)
T ss_dssp HHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSSEE
T ss_pred HHhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCccce
Confidence 3458886789999999999764321 11345688888888843
No 132
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=46.21 E-value=16 Score=36.36 Aligned_cols=38 Identities=18% Similarity=0.126 Sum_probs=26.6
Q ss_pred eeecchhHHHHHHhccccCCCcceEEEEEecCCeeEEEEEE
Q 006194 198 ARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILT 238 (657)
Q Consensus 198 ~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt~dvsv~~ 238 (657)
......|.|.|...+... ....+++|+||.|||+..+.
T Consensus 108 ~~aaanw~ASa~~~A~~~---~~~~llvDIGsTTTDIipi~ 145 (334)
T 3cet_A 108 KVSASNWCGTAKWVSKNI---EENCILVDMGSTTTDIIPIV 145 (334)
T ss_dssp GTBCCSSHHHHHHHHHHT---CSSEEEEEECSSCEEEEEEE
T ss_pred HHHhcCHHHHHHHHHHhc---CCCEEEEEcCcchhhhhhhc
Confidence 344667777777443332 12478999999999999886
No 133
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=46.02 E-value=21 Score=34.59 Aligned_cols=47 Identities=15% Similarity=0.139 Sum_probs=32.0
Q ss_pred cceEEEecCccCcHHHHHHHHhhcCCC------CCCCCCCchhhhHhHHHHHH
Q 006194 358 IREIVLVGGSTRIPKIQQLLKDFFDGK------EPSKGINPDEAVAHGAAVQG 404 (657)
Q Consensus 358 i~~V~LvGG~sr~p~v~~~l~~~f~~~------~v~~~~~~~~ava~GAa~~a 404 (657)
++.|+|.||.+..+.+.+.+++.+... ++......+.+.++|||.++
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 467888898887788888887776321 12222234568899999876
No 134
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=45.19 E-value=17 Score=37.20 Aligned_cols=49 Identities=20% Similarity=0.128 Sum_probs=33.2
Q ss_pred CcceEEEecCccCcHH-HHHHHHhhcCCC---CCCCCCCchhhhHhHHHHHHh
Q 006194 357 DIREIVLVGGSTRIPK-IQQLLKDFFDGK---EPSKGINPDEAVAHGAAVQGG 405 (657)
Q Consensus 357 ~i~~V~LvGG~sr~p~-v~~~l~~~f~~~---~v~~~~~~~~ava~GAa~~a~ 405 (657)
+++.|+|.||.+..+. +.+.+.+.+... .+........+.++||+..+.
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 5789999999987544 778887777321 122232334689999998763
No 135
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=44.04 E-value=55 Score=34.48 Aligned_cols=30 Identities=23% Similarity=0.470 Sum_probs=24.3
Q ss_pred CcceEEEEEecCCeeEEEEEEEeCC-eEEEE
Q 006194 218 GEMNILVYDLGGGTFDVSILTIDNG-VFEVL 247 (657)
Q Consensus 218 ~~~~vlv~D~Gggt~dvsv~~~~~~-~~~v~ 247 (657)
+.+.+|.+|+||.++-+.++++.+. .+++.
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~g~~~~~~~ 108 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLGGNHDFDTT 108 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEESSSCEEEE
T ss_pred cceEEEEEEecCCeEEEEEEEECCCCceEEE
Confidence 4568999999999999999999865 34443
No 136
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=43.46 E-value=18 Score=34.97 Aligned_cols=22 Identities=18% Similarity=0.294 Sum_probs=19.0
Q ss_pred CeEEEEEcCccceEEEEEE-CCe
Q 006194 32 GTVIGIDLGTTYSCVGVYR-NGR 53 (657)
Q Consensus 32 ~~viGIDlGTt~s~va~~~-~g~ 53 (657)
...+.||+|+|+++.++++ +++
T Consensus 23 ~M~L~IDiGNT~ik~g~~~~~~~ 45 (271)
T 2f9w_A 23 SMILELDCGNSLIKWRVIEGAAR 45 (271)
T ss_dssp CEEEEEEECSSCEEEEEEETTTE
T ss_pred CcEEEEEeCCCeeEEEEEeCCCE
Confidence 3579999999999999998 654
No 137
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=42.88 E-value=42 Score=34.98 Aligned_cols=42 Identities=24% Similarity=0.364 Sum_probs=26.8
Q ss_pred eeeecchhHHHHHHh-----ccccCC--CcceEEEEEecCCeeEEEEEE
Q 006194 197 VARIINEPTAAAIAY-----GLDKKG--GEMNILVYDLGGGTFDVSILT 238 (657)
Q Consensus 197 ~~~li~Ep~Aaal~y-----~~~~~~--~~~~vlv~D~Gggt~dvsv~~ 238 (657)
.+++|+..+-+.++| .+..-. ...++.++|+|||++.++...
T Consensus 151 ~v~iisG~eEg~y~wi~vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 151 GAKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEECCHHHHHHHHHHHHHHHTTTTC---CCCCEEEEECSSEEEEEECC
T ss_pred ceEECCchhhhhhhHHHHHhhhccccCCCCCceEEEecCCCceEEEecc
Confidence 467777665554443 322211 135688999999999998664
No 138
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=42.68 E-value=17 Score=32.22 Aligned_cols=18 Identities=44% Similarity=0.517 Sum_probs=16.4
Q ss_pred eEEEEEcCccceEEEEEE
Q 006194 33 TVIGIDLGTTYSCVGVYR 50 (657)
Q Consensus 33 ~viGIDlGTt~s~va~~~ 50 (657)
.++|||.|++++..++.+
T Consensus 2 rILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp EEEEEECCSSEEEEEEEE
T ss_pred EEEEEccccCceEEEEEE
Confidence 589999999999999984
No 139
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=42.46 E-value=21 Score=36.49 Aligned_cols=22 Identities=14% Similarity=0.391 Sum_probs=19.5
Q ss_pred CCeEEEEEcCccceEEEEEECC
Q 006194 31 LGTVIGIDLGTTYSCVGVYRNG 52 (657)
Q Consensus 31 ~~~viGIDlGTt~s~va~~~~g 52 (657)
|+.++|||+|.|++++++++.+
T Consensus 1 m~~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 1 MFRILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp CCEEEEEEECSSEEEEEEEETT
T ss_pred CCeEEEEECCccceeEEEEecc
Confidence 3579999999999999999866
No 140
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=41.08 E-value=89 Score=32.64 Aligned_cols=26 Identities=19% Similarity=0.441 Sum_probs=22.8
Q ss_pred CcceEEEEEecCCeeEEEEEEEeCCe
Q 006194 218 GEMNILVYDLGGGTFDVSILTIDNGV 243 (657)
Q Consensus 218 ~~~~vlv~D~Gggt~dvsv~~~~~~~ 243 (657)
+.+.++.+|+||.++-+.++...+..
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~~ 84 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGRQ 84 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETTE
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCCe
Confidence 46678999999999999999998765
No 141
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=40.59 E-value=55 Score=32.11 Aligned_cols=20 Identities=25% Similarity=0.356 Sum_probs=18.0
Q ss_pred CeEEEEEcCccceEEEEEEC
Q 006194 32 GTVIGIDLGTTYSCVGVYRN 51 (657)
Q Consensus 32 ~~viGIDlGTt~s~va~~~~ 51 (657)
.+++|||+|.|++++++++.
T Consensus 7 ~~~lgiDiGgt~i~~~l~d~ 26 (310)
T 3htv_A 7 NVVAGVDMGATHIRFCLRTA 26 (310)
T ss_dssp EEEEEEEECSSEEEEEEEET
T ss_pred CEEEEEEeCCCEEEEEEECC
Confidence 47999999999999999864
No 142
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=39.65 E-value=17 Score=38.76 Aligned_cols=30 Identities=13% Similarity=0.077 Sum_probs=23.9
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHHHHcCCce
Q 006194 168 KDAVVTVPAYFNDAQRQATKDAGIIAGLNV 197 (657)
Q Consensus 168 ~~~vitVPa~~~~~qr~~l~~Aa~~AGl~~ 197 (657)
..++.-+|..++...-.++.+++...|+++
T Consensus 131 ~~~I~v~~~~i~~~d~a~~in~a~~~g~~i 160 (607)
T 1nbw_A 131 EGWIVLIDDAVDFLDAVWWLNEALDRGINV 160 (607)
T ss_dssp TCEEEEECSSSCHHHHHHHHHHHHHTTCCE
T ss_pred CCEEEECCCccCHHHHHHHHHHHHHcCCcE
Confidence 345555899999999999999998888743
No 143
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=39.48 E-value=21 Score=34.53 Aligned_cols=73 Identities=10% Similarity=0.158 Sum_probs=40.4
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHH
Q 006194 324 LTRARFEELNMDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQ 403 (657)
Q Consensus 324 itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~ 403 (657)
+-+...+.+-..++......|+..+++.......--.|+++||.+. .|...++ . ....+|+ -+-.|..+.
T Consensus 180 ~g~nT~~ai~sGi~~g~~g~i~~~i~~~~~e~~~~~~vi~TGG~a~------~l~~~~~-~--~~~~~~~-LvL~GL~~i 249 (268)
T 2h3g_X 180 VGKNTVSAMQSGILYGYVGQVEGIVKRMKEEAKQEPKVIATGGLAK------LISEESN-V--IDVVDPF-LTLKGLYML 249 (268)
T ss_dssp SCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCEEEEESTTHH------HHHHHCS-S--CSEECTT-HHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCHH------HHHhhCC-C--CCEECcc-hHHHHHHHH
Confidence 4455566676677777766666665543211112247999999854 3344442 1 1223443 556788766
Q ss_pred Hhh
Q 006194 404 GGI 406 (657)
Q Consensus 404 a~~ 406 (657)
...
T Consensus 250 ~~~ 252 (268)
T 2h3g_X 250 YER 252 (268)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
No 144
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=38.97 E-value=79 Score=33.09 Aligned_cols=52 Identities=23% Similarity=0.377 Sum_probs=33.4
Q ss_pred CcceEEEEEecCCeeEEEEEEEeCC-----eEEEEEEeCCCC----CccchhhHHHHHHHHHHH
Q 006194 218 GEMNILVYDLGGGTFDVSILTIDNG-----VFEVLATSGDTH----LGGEDFDHRVMDYFIKLI 272 (657)
Q Consensus 218 ~~~~vlv~D~Gggt~dvsv~~~~~~-----~~~v~~~~~~~~----lGG~~~d~~l~~~l~~~~ 272 (657)
+.+.+|.+|+||.++-|..+++.++ .+++....+..+ .| . ...|.+|+.+.+
T Consensus 75 E~G~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~~~Ip~~l~~g-t--~~eLFd~IA~~i 135 (470)
T 3f9m_A 75 EVGDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTG-T--AEMLFDYISECI 135 (470)
T ss_dssp CCEEEEEEEESSSEEEEEEEEEEC----CEEEEEEEEEEECCHHHHSS-B--HHHHHHHHHHHH
T ss_pred cceEEEEEEecCceEEEEEEEECCCCCCcceEEEEEEeecCChHhccC-C--HHHHHHHHHHHH
Confidence 4668999999999999999999864 355444333221 11 1 245666666544
No 145
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=37.83 E-value=33 Score=32.53 Aligned_cols=74 Identities=14% Similarity=0.174 Sum_probs=36.2
Q ss_pred HHHHhhhchHHHHHHHHHHHHhhh---hhcC---CCHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Q 006194 560 RERVDSRNKLETYIYNMRSTINDK---LADK---IDSDDKERIESTLKEALEWLDDNQNAEKDDFDEKMKEVEAVCNPVI 633 (657)
Q Consensus 560 ~~~~ea~N~LE~~iy~~r~~l~~~---~~~~---~~~~e~~~i~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~~i~ 633 (657)
....+.+..|..|.-.+|.++... ++.. ..++=+.++...++++..|+......-.+.+....++|+..+.|..
T Consensus 132 ~~~eel~~~L~p~~eelr~kl~~~veelk~~l~P~~ee~r~kl~~~~~el~~~l~p~~~e~~~kl~~~~e~lr~~l~p~~ 211 (243)
T 2a01_A 132 QKLHELQEKLSPLGEEMRDRARAHVDALRTHLAPYSDELRQRLAARLEALKENGGARLAEYHAKATEHLSTLSEKAKPAL 211 (243)
T ss_dssp HHHHHHCCSCCSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSCCHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhHHHH
Confidence 344455555555555555555432 2211 2345567777777777887765411112233333444444444433
No 146
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=36.20 E-value=13 Score=36.23 Aligned_cols=67 Identities=7% Similarity=-0.042 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHHHh
Q 006194 334 MDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQGG 405 (657)
Q Consensus 334 ~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~a~ 405 (657)
..++++....+-..+ .... ..+.+.|+|.||-+.. +.+.|++.+....+ ....+..+.+.||++++.
T Consensus 211 ~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~--l~~~l~~~l~~~~~-~i~~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 211 RQLVMNSFIAFFRRN-VMQY-DYKQYPVHFIGSIAYC--YKEILQDAARQTGI-QIGKILQSPMEGLIQYHS 277 (291)
T ss_dssp THHHHHHHHHHHTTT-GGGS-CTTTSCEEECSHHHHH--THHHHHHHTTTTTC-CEEEECSCTHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHH-hccc-CCCCceEEEECcHHHH--HHHHHHHHHhcCCc-EEeecCCCHHHHHHHHHH
Confidence 345555555555555 2222 1156789998988765 56667776632111 112345678899998764
No 147
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=32.17 E-value=2.2e+02 Score=33.29 Aligned_cols=24 Identities=13% Similarity=0.200 Sum_probs=13.7
Q ss_pred EeCCCCCccchhhHHHHHHHHHHH
Q 006194 249 TSGDTHLGGEDFDHRVMDYFIKLI 272 (657)
Q Consensus 249 ~~~~~~lGG~~~d~~l~~~l~~~~ 272 (657)
..|-..+..+.|++...+|..+++
T Consensus 438 I~GFE~f~~NsFEQlcINy~NEkL 461 (1080)
T 2dfs_A 438 IYGFETFEINSFEQFCINYANEKL 461 (1080)
T ss_dssp ECCCCCCSSBCHHHHHHHHHHHHH
T ss_pred cCCccccCcCCHHHHHHHhhhHHH
Confidence 344444556677776666655444
No 148
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=32.06 E-value=72 Score=31.15 Aligned_cols=49 Identities=18% Similarity=0.115 Sum_probs=30.8
Q ss_pred CcceEEEecCccCcH----HHHHHHHhhcCC------------CCCCCCCCchhhhHhHHHHHHh
Q 006194 357 DIREIVLVGGSTRIP----KIQQLLKDFFDG------------KEPSKGINPDEAVAHGAAVQGG 405 (657)
Q Consensus 357 ~i~~V~LvGG~sr~p----~v~~~l~~~f~~------------~~v~~~~~~~~ava~GAa~~a~ 405 (657)
+++.|+|-||.++.+ .+++.+.+.... ..+....-.+.+.++|||.++.
T Consensus 224 dPe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~ 288 (302)
T 3epq_A 224 APXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAH 288 (302)
T ss_dssp CCSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHH
T ss_pred CchhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHHH
Confidence 467899999988754 445555554311 0122333456799999998874
No 149
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=31.85 E-value=62 Score=31.55 Aligned_cols=43 Identities=30% Similarity=0.414 Sum_probs=31.3
Q ss_pred ceEEEecCccCcHHHHHHHHhhcCCCCCCCCCCchhhhHhHHHHHH
Q 006194 359 REIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQG 404 (657)
Q Consensus 359 ~~V~LvGG~sr~p~v~~~l~~~f~~~~v~~~~~~~~ava~GAa~~a 404 (657)
..|.|+|........+..|+. + +.++. ..++++++..|....+
T Consensus 248 ~~v~LiG~~~L~~~Y~~AL~~-~-G~~~~-~~d~~~~~~~GL~~~~ 290 (295)
T 3nuw_A 248 QAISLVAGSSLTSRYQQAFAA-I-GREVS-AVAGDTAFQTGIRSIA 290 (295)
T ss_dssp SCEEEEECHHHHHHHHHHHHH-T-TCCEE-EEEHHHHHHHHHHHHH
T ss_pred CeEEEEeCHHHHHHHHHHHHH-c-CCCce-ecCHHHHHHHHHHHHH
Confidence 569999999888888888865 4 44432 3478888888876544
No 150
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=31.05 E-value=2.8e+02 Score=24.54 Aligned_cols=66 Identities=15% Similarity=0.215 Sum_probs=33.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhHHHHHHHhhhchHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHhc
Q 006194 535 GRLSQEEIDRMVKEAEEFAEEDKKVRERVDSRNKLETYIYNMRSTINDKLADKIDSDDKERIESTLKEALEWLDD 609 (657)
Q Consensus 535 ~~ls~~e~~~~~~~~~~~~~~D~~~~~~~ea~N~LE~~iy~~r~~l~~~~~~~~~~~e~~~i~~~l~~~~~WL~~ 609 (657)
..||+++.+++.+-.+++..+- .+.+.++.+.-.+++..+ ..+..++...+++.+.+.+++.-|..
T Consensus 66 LnLT~EQq~ql~~I~~e~r~~~------~~Lr~ql~akr~EL~aL~---~a~~~DeakI~aL~~Ei~~Lr~qL~~ 131 (175)
T 3lay_A 66 SPLTTEQQATAQKIYDDYYTQT------SALRQQLISKRYEYNALL---TASSPDTAKINAVAKEMESLGQKLDE 131 (175)
T ss_dssp --CCHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHH---TSSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 5699999888876655554332 222222222222222222 23555666666666666665555544
No 151
>3fcg_A F1 capsule-anchoring protein; beta barrel, beta strand swapping, cell membrane, cell outer membrane, cell projection, fimbrium, membrane; 2.85A {Yersinia pestis}
Probab=28.81 E-value=1.7e+02 Score=22.73 Aligned_cols=55 Identities=22% Similarity=0.389 Sum_probs=32.0
Q ss_pred eEEEEEecCCcccccCcceeeEEecCCCCCCCCCCeeEEEEEEcCCCcEEEEEEecCCcceeEEEEecc
Q 006194 465 VTIKVYEGERSLTKDCRELGRFDLSGIPPAPRGVPQIEVTFEVDANGILHVTAEDKGAKNKQSITIIND 533 (657)
Q Consensus 465 ~~i~v~~g~~~~~~~~~~lg~~~l~~~~~~~~~~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~ 533 (657)
-.+.|+|.....-+..-.=|-|.|+++++. ...|.|.|+++| ..|+.+.+++...
T Consensus 27 A~V~v~qnG~~iy~~~VppGpF~I~dl~~~-------------~~~Gdl~V~v~e-adG~~~~~~vp~~ 81 (90)
T 3fcg_A 27 ARVEVLRDGYTVSNELVPSGPFELANLPLG-------------GGSGELKVIIHE-SDGTKQVFTVPYD 81 (90)
T ss_dssp EEEEEESSSCEEEEEEECSEEEEECCCC----------------CCEEEEEEEEC-TTSCEEEEEEEEC
T ss_pred cEEEEEECCEEEEEeEeCCCCeEEcCCccc-------------CCceeEEEEEEE-CCCCEEEEEECcc
Confidence 345566554444344445588999888763 234667776666 4566666666554
No 152
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=28.35 E-value=37 Score=26.33 Aligned_cols=28 Identities=18% Similarity=0.221 Sum_probs=25.6
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCce
Q 006194 170 AVVTVPAYFNDAQRQATKDAGIIAGLNV 197 (657)
Q Consensus 170 ~vitVPa~~~~~qr~~l~~Aa~~AGl~~ 197 (657)
-.++.|+.++..+|..+-+.|+..||..
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 4788999999999999999999999864
No 153
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=27.81 E-value=2.1e+02 Score=31.07 Aligned_cols=96 Identities=16% Similarity=0.173 Sum_probs=59.9
Q ss_pred eEEEEEecCCeeEEEEEEEeCCeEEEEEEeCCC--CCccchhhHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHH
Q 006194 221 NILVYDLGGGTFDVSILTIDNGVFEVLATSGDT--HLGGEDFDHRVMDYFIKLIKKKYNKDISKDNKAIGKLRRECERAK 298 (657)
Q Consensus 221 ~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~--~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K 298 (657)
.=+.+|+|..|+-+.++.+..+..--.....+. .+|.+-+++.-+.. .+.
T Consensus 207 ~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~G~DVisRI~~a~-----~~~----------------------- 258 (631)
T 3zyy_X 207 FGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAFGDDVISRIIYVD-----ENP----------------------- 258 (631)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGTCSSHHHHHHHHH-----HCT-----------------------
T ss_pred eEEEEEecccceeEEEEECCCCCEEEeecccCCCCCcchHHHHHHHHHh-----cCc-----------------------
Confidence 346789999999999999887754333333333 45555544432211 000
Q ss_pred HHccCCceeEEEEeeccCCceeEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHH
Q 006194 299 RALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNMDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPK 372 (657)
Q Consensus 299 ~~Ls~~~~~~~~i~~l~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~ 372 (657)
+-.+++-+-+++.+-..+.+.++++++++.+|..+.++|-.+-.-+
T Consensus 259 ----------------------------~g~~~L~~~v~~~in~li~~l~~~~~i~~~~I~~~~v~GNt~M~hL 304 (631)
T 3zyy_X 259 ----------------------------DGAEKLRKAVLSTINELIFQLCKEHGVEKKEIMAAVVAGNTTMTHL 304 (631)
T ss_dssp ----------------------------THHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECHHHHHH
T ss_pred ----------------------------ccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHeeEEEEEccHHHHHH
Confidence 0123333445566667778888888999999999999997654433
No 154
>1wxp_A THO complex subunit 1; death domain, structural genomics, nuclear matrix, riken structural genomics/proteomics initiative, RSGI, transport protein; NMR {Homo sapiens}
Probab=27.63 E-value=88 Score=25.30 Aligned_cols=50 Identities=16% Similarity=0.336 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHhcC-CCCCHHHHHHHHHHHH--HHHHHHHHHHHhhcCCCCCC
Q 006194 594 ERIESTLKEALEWLDDN-QNAEKDDFDEKMKEVE--AVCNPVIKQVYEKNGGSSSA 646 (657)
Q Consensus 594 ~~i~~~l~~~~~WL~~~-~~a~~~~~~~kl~~L~--~~~~~i~~r~~e~~~~~~~~ 646 (657)
+...++| ..|...+ ..||.+.+.+.|..+. .+++.+...+.+.+.++|+|
T Consensus 58 eq~~~mL---~~W~~r~G~~AT~~~L~~AL~~~~~~dvae~l~~~~~~~~~~p~~~ 110 (110)
T 1wxp_A 58 MRAKQLL---VAWQDQEGVHATPENLINALNKSGLSDLAESLTNDNETNSSGPSSG 110 (110)
T ss_dssp HHHHHHH---HHHHHHHGGGCCHHHHHHHHHHTTCHHHHHHHHCCCSSCSCCCCCC
T ss_pred HHHHHHH---HHHHHhhCcCcHHHHHHHHHHHcCcHHHHHHHHHHhhccCCCCCCC
Confidence 4444444 5699876 6789999988887754 66676666665555555554
No 155
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=26.92 E-value=2.7e+02 Score=24.31 Aligned_cols=20 Identities=20% Similarity=0.358 Sum_probs=9.4
Q ss_pred HHHhhhchHHHHHHHHHHHH
Q 006194 561 ERVDSRNKLETYIYNMRSTI 580 (657)
Q Consensus 561 ~~~ea~N~LE~~iy~~r~~l 580 (657)
...+.|..|+.|+..++.++
T Consensus 107 d~EelR~~l~p~~~el~~~l 126 (165)
T 1gs9_A 107 DMEDVRGRLVQYRGEVQAML 126 (165)
T ss_dssp HHHHHHHHHHHHHHHHHTST
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34444455555544444444
No 156
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=26.33 E-value=14 Score=36.13 Aligned_cols=59 Identities=14% Similarity=0.043 Sum_probs=31.7
Q ss_pred CCcEEEEeCCCCCHHHHHHHHHHHH-HcCC-ceeeecchhHHHHHHhccccCCCcceEEEEEecCCe
Q 006194 167 IKDAVVTVPAYFNDAQRQATKDAGI-IAGL-NVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGT 231 (657)
Q Consensus 167 ~~~~vitVPa~~~~~qr~~l~~Aa~-~AGl-~~~~li~Ep~Aaal~y~~~~~~~~~~vlv~D~Gggt 231 (657)
+..+.|++|..- ......+++..+ ..++ ..+.+.|+..||+++-. . ....+++=+|-|.
T Consensus 58 i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~----g-~~~~v~v~~GTGi 118 (291)
T 1zxo_A 58 FNAVYFYGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC----G-QKAGIACILGTGS 118 (291)
T ss_dssp ---CEEECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT----T-TSCBEEEEESSSE
T ss_pred ccEEEEEcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc----C-CCCcEEEEeCCCh
Confidence 445778888653 211123433333 3464 35789999999998642 1 2233444477776
No 157
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=26.10 E-value=1e+02 Score=33.55 Aligned_cols=58 Identities=17% Similarity=0.214 Sum_probs=45.8
Q ss_pred eEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHH
Q 006194 320 FSEPLTRARFEELNMDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLK 378 (657)
Q Consensus 320 ~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~ 378 (657)
-.+.||..++.++.. .-..+..-++-.|+.++++..+|+.|+|.||+..---..+.+.
T Consensus 498 ~~i~itq~DIr~~ql-AKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~ 555 (631)
T 3zyy_X 498 KDIVITEADIQNLIR-AKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAIT 555 (631)
T ss_dssp SCEEEEHHHHHHHHH-HHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHH
T ss_pred CcEEEeHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhh
Confidence 457899999987643 2344566677888999999999999999999998766666654
No 158
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=25.48 E-value=75 Score=31.05 Aligned_cols=47 Identities=13% Similarity=0.075 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhc
Q 006194 332 LNMDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFF 381 (657)
Q Consensus 332 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f 381 (657)
+.+.....+...++++|+++++++.+|+.|+.-|+++++ -+.+.+.|
T Consensus 212 ~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~l 258 (317)
T 1hnj_A 212 VFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKL 258 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHc
Confidence 334455677788999999999999999999999988664 45677778
No 159
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=25.17 E-value=38 Score=33.81 Aligned_cols=43 Identities=26% Similarity=0.244 Sum_probs=28.3
Q ss_pred cCCceeeecchhHHHHHHhccccCC-CcceEEEEEecCCeeEEEEE
Q 006194 193 AGLNVARIINEPTAAAIAYGLDKKG-GEMNILVYDLGGGTFDVSIL 237 (657)
Q Consensus 193 AGl~~~~li~Ep~Aaal~y~~~~~~-~~~~vlv~D~Gggt~dvsv~ 237 (657)
.|++ +.+.|+..|+|++-...... ...+++++-+|.| +-.+++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEE
Confidence 4776 67899999999875433221 3456788888887 334443
No 160
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=24.81 E-value=1.6e+02 Score=30.40 Aligned_cols=32 Identities=25% Similarity=0.523 Sum_probs=25.5
Q ss_pred CcceEEEEEecCCeeEEEEEEEeCCeEEEEEEe
Q 006194 218 GEMNILVYDLGGGTFDVSILTIDNGVFEVLATS 250 (657)
Q Consensus 218 ~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~ 250 (657)
+.+.+|.+|+||.++-|.++++.++ +++....
T Consensus 57 E~G~~LAlDlGGTn~RV~~V~l~g~-~~~~~~~ 88 (445)
T 3hm8_A 57 ERGDFLALDLGGTNFRVLLVRVTTG-VQITSEI 88 (445)
T ss_dssp CCEEEEEEEESSSSEEEEEEEESSS-EEEEEEE
T ss_pred eeeEEEEEEecCCeEEEEEEEECCc-eEEEEEE
Confidence 4567999999999999999999776 5544433
No 161
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=24.25 E-value=3.7e+02 Score=23.76 Aligned_cols=45 Identities=18% Similarity=0.358 Sum_probs=23.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhhHHHHHHHhhhchHHHHHHHHHHHHhh
Q 006194 536 RLSQEEIDRMVKEAEEFAEEDKKVRERVDSRNKLETYIYNMRSTIND 582 (657)
Q Consensus 536 ~ls~~e~~~~~~~~~~~~~~D~~~~~~~ea~N~LE~~iy~~r~~l~~ 582 (657)
+++.+-..++....+.+.. +..+...+.|..|+.|+-.++..+..
T Consensus 67 p~~~e~~~~l~~~~~~Lr~--~l~kdlee~r~~l~P~~~e~~~~~~~ 111 (185)
T 3r2p_A 67 PVTQEFWDNLEKETEGLRQ--EMSKDLEEVKAKVQPYLDDFQKKWQE 111 (185)
T ss_dssp SCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHH--HHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444333322 23345666777777777776666643
No 162
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=23.58 E-value=1.6e+02 Score=28.94 Aligned_cols=20 Identities=25% Similarity=0.303 Sum_probs=18.0
Q ss_pred CeEEEEEcCccceEEEEEEC
Q 006194 32 GTVIGIDLGTTYSCVGVYRN 51 (657)
Q Consensus 32 ~~viGIDlGTt~s~va~~~~ 51 (657)
.+++|||+|+|++++++++.
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~ 49 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSM 49 (343)
T ss_dssp EEEEEEEECSSEEEEEEEET
T ss_pred cEEEEEEECCCEEEEEEECC
Confidence 47999999999999999864
No 163
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=22.45 E-value=3.2e+02 Score=24.43 Aligned_cols=22 Identities=14% Similarity=0.218 Sum_probs=13.4
Q ss_pred HHHHhhhchHHHHHHHHHHHHh
Q 006194 560 RERVDSRNKLETYIYNMRSTIN 581 (657)
Q Consensus 560 ~~~~ea~N~LE~~iy~~r~~l~ 581 (657)
....+.|..|+.|.-+++.++.
T Consensus 106 kdlEelr~kL~P~~eEL~~~l~ 127 (191)
T 1nfn_A 106 ADMEDVCGRLVQYRGEVQAMLG 127 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhHHHHHHHHHHH
Confidence 4455566666666666666664
No 164
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=22.36 E-value=1.9e+02 Score=30.04 Aligned_cols=24 Identities=33% Similarity=0.560 Sum_probs=21.5
Q ss_pred CcceEEEEEecCCeeEEEEEEEeC
Q 006194 218 GEMNILVYDLGGGTFDVSILTIDN 241 (657)
Q Consensus 218 ~~~~vlv~D~Gggt~dvsv~~~~~ 241 (657)
+.+.++.+|+||.++-+.+++..+
T Consensus 66 E~G~~lalDlGGTn~Rv~~V~l~G 89 (451)
T 1bdg_A 66 ETGNFLALDLGGTNYRVLSVTLEG 89 (451)
T ss_dssp CCEEEEEEEESSSSEEEEEEEECC
T ss_pred ccceEEEEEeCCCeEEEEEEecCC
Confidence 456799999999999999999976
No 165
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=22.34 E-value=47 Score=32.92 Aligned_cols=36 Identities=19% Similarity=0.305 Sum_probs=16.2
Q ss_pred EEEEEcCccceEEEEEE-CCeE--EEE--ecCCCCcccceE
Q 006194 34 VIGIDLGTTYSCVGVYR-NGRV--EII--ANDQGNRITPSW 69 (657)
Q Consensus 34 viGIDlGTt~s~va~~~-~g~~--~ii--~~~~g~~~~Ps~ 69 (657)
++|+|+|..|++++... +|.+ ..+ +-|.|....+..
T Consensus 2 iiG~DIGGAn~K~a~~~~~g~~~~~~~~~PlW~~~~~L~~~ 42 (334)
T 3cet_A 2 ILGIDIGGANTKITELHENGEFKVHHLYFPMWKNNDKLAEV 42 (334)
T ss_dssp EEEEEEC--CEEEEEECSTTCCEEEEC--------------
T ss_pred eeEEEecccceeeeeecCCCceEEEEEecCCcCCchHHHHH
Confidence 79999999999999875 5542 222 345554444443
No 166
>3mxz_A Tubulin-specific chaperone A; helix bundle; 1.60A {Arabidopsis thaliana}
Probab=22.32 E-value=3.2e+02 Score=22.33 Aligned_cols=38 Identities=24% Similarity=0.330 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcC---CCCCHHHHHHHHHHHHH
Q 006194 590 SDDKERIESTLKEALEWLDDN---QNAEKDDFDEKMKEVEA 627 (657)
Q Consensus 590 ~~e~~~i~~~l~~~~~WL~~~---~~a~~~~~~~kl~~L~~ 627 (657)
|+-+.+|.+.+.+++.||.+. ...+.++|.+....|.+
T Consensus 66 pd~~~RL~~a~~~L~~~l~~~~~~~~~~~ee~~~Ak~~l~~ 106 (116)
T 3mxz_A 66 PDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTVAD 106 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC-CCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHH
Confidence 456788999999999999853 23557788777666654
No 167
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=22.30 E-value=32 Score=37.45 Aligned_cols=25 Identities=36% Similarity=0.740 Sum_probs=22.5
Q ss_pred cceEEEecCccCcHHHHHHHHhhcC
Q 006194 358 IREIVLVGGSTRIPKIQQLLKDFFD 382 (657)
Q Consensus 358 i~~V~LvGG~sr~p~v~~~l~~~f~ 382 (657)
.+.|++|||++.+|.+.-.|.+.++
T Consensus 501 y~nilivGggski~g~~~~L~dri~ 525 (655)
T 4am6_A 501 YSNILIVGGSSKIPALDFILTDRIN 525 (655)
T ss_dssp HTCEEEESTTCCCTTHHHHHHHHHH
T ss_pred hhcEEEEcCcccCccHHHHHHHHHH
Confidence 4789999999999999999998873
No 168
>3fh3_A Putative ECF-type sigma factor negative effector; putative anti-sigma W factor, MCSG, PSI, structural genomics; HET: MSE; 2.10A {Bacillus anthracis str} PDB: 3fgg_A
Probab=22.14 E-value=3.8e+02 Score=23.05 Aligned_cols=22 Identities=14% Similarity=0.336 Sum_probs=14.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHhh
Q 006194 535 GRLSQEEIDRMVKEAEEFAEED 556 (657)
Q Consensus 535 ~~ls~~e~~~~~~~~~~~~~~D 556 (657)
..|+++|.+++++.+.++...+
T Consensus 34 ~~LtkeEFeqfi~LlKe~~~i~ 55 (158)
T 3fh3_A 34 DEMGTKEYEVFTKELKKLTNAK 55 (158)
T ss_dssp GTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHHH
Confidence 4578888888777666554433
No 169
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=21.42 E-value=80 Score=33.63 Aligned_cols=31 Identities=19% Similarity=0.213 Sum_probs=24.9
Q ss_pred CCCcEEEEeCCCCCHHHHHHHHHHHHHcCCc
Q 006194 166 KIKDAVVTVPAYFNDAQRQATKDAGIIAGLN 196 (657)
Q Consensus 166 ~~~~~vitVPa~~~~~qr~~l~~Aa~~AGl~ 196 (657)
.-..+++.||..++..+-.++.+++...|++
T Consensus 127 ~~~~~i~~~~~~~df~~~a~~in~~~~~g~~ 157 (610)
T 2d0o_A 127 ADAPYILVVSSAFDFADIASVINASLRAGYQ 157 (610)
T ss_dssp TTSEEEEEECTTSCHHHHHHHHHHHHHTTCE
T ss_pred CCCcEEEEECCcCCHHHHHHHHHHHHHCCCc
Confidence 3346888899999999999888888877763
No 170
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=20.94 E-value=2.3e+02 Score=27.49 Aligned_cols=31 Identities=35% Similarity=0.439 Sum_probs=23.1
Q ss_pred ceEEEEEecCCeeEEEEEEEeCCeEEEEEEe
Q 006194 220 MNILVYDLGGGTFDVSILTIDNGVFEVLATS 250 (657)
Q Consensus 220 ~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~ 250 (657)
..++.+|+|+..+.+.++...+..+......
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~il~~~~~~ 36 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGVVQQKWSIE 36 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEEEEEEc
Confidence 4688999999999999998766554433333
No 171
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=20.84 E-value=97 Score=30.30 Aligned_cols=45 Identities=24% Similarity=0.228 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhc
Q 006194 334 MDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFF 381 (657)
Q Consensus 334 ~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f 381 (657)
+-....+...++++|+++++++.+|+.|+.-|+++++ -+.+.+.|
T Consensus 216 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~l 260 (322)
T 1ub7_A 216 KFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERL 260 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHc
Confidence 3445667788999999999999999999999988654 45677777
No 172
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=20.43 E-value=1.1e+02 Score=29.74 Aligned_cols=44 Identities=18% Similarity=0.270 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcceEEEecCccCcHHHHHHHHhhc
Q 006194 335 DLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFF 381 (657)
Q Consensus 335 ~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f 381 (657)
.....+...++++|+++++++.+|+.|++-|+++++ -+.+.+.|
T Consensus 207 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~l 250 (309)
T 2ebd_A 207 VAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKL 250 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHh
Confidence 345567788999999999999999999999988764 34577777
No 173
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=20.03 E-value=2e+02 Score=19.07 Aligned_cols=29 Identities=10% Similarity=0.220 Sum_probs=17.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhhHHHHHHHhhhchH
Q 006194 536 RLSQEEIDRMVKEAEEFAEEDKKVRERVDSRNKL 569 (657)
Q Consensus 536 ~ls~~e~~~~~~~~~~~~~~D~~~~~~~ea~N~L 569 (657)
..+..+++++++++- ++-+++..+++|++
T Consensus 3 ~~~~~dle~~KqEIL-----~E~RkElqK~K~EI 31 (45)
T 1use_A 3 SSDYSDLQRVKQELL-----EEVKKELQKVKEEI 31 (45)
T ss_dssp CCCHHHHHHHHHHHH-----HHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHH-----HHHHHHHHHHHHHH
Confidence 456778888876654 22344555555554
Done!