Citrus Sinensis ID: 006194

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------
MKIENKALAILLLFAFEFSLALAAADDATKLGTVIGIDLGTTYSCVGVYRNGRVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAALNAERTVFDVKRLIGRKFDDPEVQRDIKFLPYKIVNKGGKPYIQVKVKGETKVFSPEEISAMILQKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRVMDYFIKLIKKKYNKDISKDNKAIGKLRRECERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNMDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQGGILSGEGGDETKGILLLDVAPLSLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQSTVTIKVYEGERSLTKDCRELGRFDLSGIPPAPRGVPQIEVTFEVDANGILHVTAEDKGAKNKQSITIINDKGRLSQEEIDRMVKEAEEFAEEDKKVRERVDSRNKLETYIYNMRSTINDKLADKIDSDDKERIESTLKEALEWLDDNQNAEKDDFDEKMKEVEAVCNPVIKQVYEKNGGSSSADSEDEEPNDEL
ccccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEcccccccEEEEEEccEEEEEcccccccccccCEEEccccccccHHHHHHHHHcccccccccccccccccccHHHHHHcccccCEEEccccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccHHHHHHHHHHHHcccEEEEEccHHHHHHHHHcccccccccEEEEEEccccccEEEEEEEEccEEEEEEcccccccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHcccccccccccCEEECccccccccccccccccccccccccccccccEEEEcccccccEEEEEEEcccccccccccccccEEcccccccccccccEEEEEEEccccCEEEEEEEccccccccEEECcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcHHHcccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccc
*****KALAILLLFAFEFSLALAAADDATKLGTVIGIDLGTTYSCVGVYRNGRVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAALNAERTVFDVKRLIGRKFDDPEVQRDIKFLPYKIVNKGGKPYIQVKVKGETKVFSPEEISAMILQKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRVMDYFIKLIKKKYNKDISKDNKAIGKLRRECERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNMDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQGGILSGEGGDETKGILLLDVAPLSLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQSTVTIKVYEGERSLTKDCRELGRFDLSGIPPAPRGVPQIEVTFEVDANGILHVTAEDKGAKNKQSITIINDKGRLSQEEIDRMVKEAEEFAEEDK******DSRNKLETYIYNMRSTI**************RIESTLKEALEWLDDNQNAEKDDFDEKMKEVEAVCNPVIKQV*********************
xxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MKIENKALAILLLFAFEFSLALAAADDATKLGTVIGIDLGTTYSCVGVYRNGRVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAALNAERTVFDVKRLIGRKFDDPEVQRDIKFLPYKIVNKGGKPYIQVKVKGETKVFSPEEISAMILQKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEMNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRVMDYFIKLIKKKYNKDxxxxxxxxxxxxxxxxxxxxxLSSQHQVRVEIESLFDGVDFSEPLTRARFEELNMDLFKKTMGPVKKALEDAGLKKTDIREIVLVGGSTRIPKIQQLLKDFFDGKEPSKGINPDEAVAHGAAVQGGILSGEGGDETKGILLLDVAPLSLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQSTVTIKVYEGERSLTKDCRELGRFDLSGIPPAPRGVPQIEVTFEVDANGILHVTAEDKGAKNKQSITIINDKGRLSQEEIDRMVKEAEEFAEEDKKVRERVDSRNKLETYIYNMRSTINDKLADKIDSDDKERIESTLKEALEWLDDNQNAEKDDFDEKMKEVEAVCNPVIKQVYEKNGGSSSADSEDEEPNDEL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
78 kDa glucose-regulated protein Probably plays a role in facilitating the assembly of multimeric protein complexes inside the ER.confidentQ5R4P0
Mediator of RNA polymerase II transcription subunit 37a In cooperation with other chaperones, Hsp70s stabilize preexistent proteins against aggregation and mediate the folding of newly translated polypeptides in the cytosol as well as within organelles. These chaperones participate in all these processes through their ability to recognize nonnative conformations of other proteins. They bind extended peptide segments with a net hydrophobic character exposed by polypeptides during translation and membrane translocation, or following stress-induced damage.confidentQ9LKR3
78 kDa glucose-regulated protein Probably plays a role in facilitating the assembly of multimeric protein complexes inside the ER.confidentQ90593

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1YUW, chain A
Confidence level:very confident
Coverage over the Query: 30-580
View the alignment between query and template
View the model in PyMOL
Template: 2KHO, chain A
Confidence level:very confident
Coverage over the Query: 34-637
View the alignment between query and template
View the model in PyMOL
Template: 2P32, chain A
Confidence level:very confident
Coverage over the Query: 559-639
View the alignment between query and template
View the model in PyMOL